View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11582_high_60 (Length: 229)
Name: NF11582_high_60
Description: NF11582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11582_high_60 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 46895870 - 46895648
Alignment:
| Q |
7 |
agatcaccttaaaatgttgacaaaacagacatgtcatgactaagaagcatagatgttggcaaatagaataatcatgaacataacaattggataaaaagtc |
106 |
Q |
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| T |
46895870 |
agatcaccttaaaatgttgaaaaaacagatatgtcatgactaagaagcatagatgttggcaaatagaataatcatgaacataacaattggataacaagtc |
46895771 |
T |
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| Q |
107 |
tcaaatgttttcatgaacagctgctgcctaataaaataaccataacagaaaaataacaaagttctgaaagttctaatattttgatatatagataatagat |
206 |
Q |
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| T |
46895770 |
tcaaatgttttcatgaacagctgctgcctaataaaataaccataacagaaaaataacaaagttctgaaatttctaatattttgatatatagatagtagat |
46895671 |
T |
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| Q |
207 |
actatagactatttttaggaaca |
229 |
Q |
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| T |
46895670 |
actatagactatttttaggaaca |
46895648 |
T |
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