View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11582_low_50 (Length: 250)
Name: NF11582_low_50
Description: NF11582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11582_low_50 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 34121069 - 34121305
Alignment:
| Q |
1 |
tttccctttgatgatgatttaaatcaagtgattgtaacgtccccaaagaatatctacacacgtgtgacgatcaactattctatttggataatctttgtgt |
100 |
Q |
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| T |
34121069 |
tttccatttgatgatgatttaaatcaagtgattgtaacgtccccaaagaatatctacacacgtgtgacgatcaactattctatttggataatctttgtgt |
34121168 |
T |
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| Q |
101 |
gcatatttactaatcaaacccaaccatagggattaacttcaagagtataaataagctaggaatattttatggcatatgttagggaccaaaataattggta |
200 |
Q |
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| T |
34121169 |
gcatatttactaatcaaacccaaccatagggattaacttcaagagtataaataagctaggaatattttatggcatatgttagggaccaaaataattggta |
34121268 |
T |
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| Q |
201 |
gtgtagcaggtgttgtttatggtgccttcaagttttc |
237 |
Q |
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| T |
34121269 |
gtgtagcaggtgttgtttatggtgccttcaagttttc |
34121305 |
T |
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