View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11582_low_64 (Length: 226)

Name: NF11582_low_64
Description: NF11582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11582_low_64
NF11582_low_64
[»] chr5 (6 HSPs)
chr5 (1-226)||(43170288-43170505)
chr5 (36-70)||(1293119-1293153)
chr5 (36-70)||(8728614-8728648)
chr5 (36-70)||(41621961-41621995)
chr5 (36-70)||(43057439-43057473)
chr5 (37-70)||(11306702-11306735)
[»] chr7 (9 HSPs)
chr7 (35-70)||(48314393-48314428)
chr7 (37-70)||(8459618-8459651)
chr7 (35-70)||(28109961-28109996)
chr7 (32-70)||(6427214-6427252)
chr7 (36-70)||(47925341-47925375)
chr7 (36-70)||(48395252-48395286)
chr7 (36-70)||(49069253-49069287)
chr7 (33-70)||(30941182-30941219)
chr7 (37-70)||(39875832-39875865)
[»] chr8 (16 HSPs)
chr8 (36-70)||(3155847-3155881)
chr8 (36-70)||(21526314-21526348)
chr8 (36-70)||(43066627-43066661)
chr8 (36-75)||(3756900-3756939)
chr8 (36-70)||(5740807-5740841)
chr8 (36-70)||(12659056-12659090)
chr8 (36-66)||(15116984-15117014)
chr8 (36-70)||(26629143-26629177)
chr8 (36-70)||(30170762-30170796)
chr8 (36-70)||(30943872-30943906)
chr8 (36-70)||(40102027-40102061)
chr8 (37-70)||(895938-895971)
chr8 (37-70)||(1370308-1370341)
chr8 (37-70)||(7678736-7678769)
chr8 (37-70)||(9047093-9047126)
chr8 (25-70)||(20996169-20996214)
[»] chr4 (13 HSPs)
chr4 (36-70)||(19899314-19899348)
chr4 (36-70)||(53190930-53190964)
chr4 (36-70)||(54222090-54222124)
chr4 (36-70)||(25725727-25725761)
chr4 (36-70)||(35824139-35824173)
chr4 (32-70)||(44925159-44925197)
chr4 (36-70)||(50831789-50831823)
chr4 (36-70)||(51389107-51389141)
chr4 (36-70)||(56215609-56215643)
chr4 (33-70)||(26885295-26885332)
chr4 (37-70)||(42490924-42490957)
chr4 (37-70)||(48494935-48494968)
chr4 (42-70)||(35908420-35908448)
[»] chr3 (9 HSPs)
chr3 (36-70)||(11323913-11323947)
chr3 (16-70)||(34628084-34628137)
chr3 (36-70)||(34271523-34271557)
chr3 (36-70)||(48649584-48649618)
chr3 (36-70)||(52963349-52963383)
chr3 (33-70)||(1901956-1901993)
chr3 (33-70)||(1911402-1911439)
chr3 (37-70)||(32457789-32457822)
chr3 (33-70)||(36869867-36869904)
[»] chr2 (12 HSPs)
chr2 (36-70)||(43665626-43665660)
chr2 (33-70)||(1052526-1052563)
chr2 (1-70)||(40602388-40602457)
chr2 (37-70)||(44422982-44423015)
chr2 (35-70)||(4036908-4036943)
chr2 (36-70)||(24727623-24727657)
chr2 (36-70)||(25507259-25507293)
chr2 (36-70)||(32750002-32750036)
chr2 (36-70)||(40874294-40874328)
chr2 (36-70)||(43057068-43057102)
chr2 (36-70)||(45376254-45376288)
chr2 (33-70)||(30856811-30856848)
[»] chr1 (13 HSPs)
chr1 (36-70)||(51231339-51231373)
chr1 (37-70)||(14983788-14983821)
chr1 (33-70)||(25098818-25098855)
chr1 (33-70)||(25989014-25989051)
chr1 (33-70)||(51339730-51339767)
chr1 (35-70)||(33694233-33694268)
chr1 (36-70)||(49020437-49020471)
chr1 (41-70)||(15283067-15283096)
chr1 (25-70)||(40434010-40434055)
chr1 (37-70)||(45272183-45272216)
chr1 (37-70)||(47059913-47059946)
chr1 (33-70)||(48872383-48872420)
chr1 (37-70)||(51571419-51571452)
[»] chr6 (10 HSPs)
chr6 (33-70)||(9188974-9189011)
chr6 (36-70)||(3552187-3552221)
chr6 (36-70)||(8778905-8778939)
chr6 (36-70)||(13093630-13093664)
chr6 (36-70)||(20029265-20029299)
chr6 (36-70)||(26391318-26391352)
chr6 (36-70)||(31517202-31517236)
chr6 (36-70)||(31883337-31883371)
chr6 (33-70)||(6435040-6435077)
chr6 (33-70)||(34490351-34490388)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-70)||(263728-263762)
[»] scaffold0184 (1 HSPs)
scaffold0184 (33-70)||(16624-16661)
[»] scaffold0115 (1 HSPs)
scaffold0115 (37-70)||(15222-15255)
[»] scaffold0078 (1 HSPs)
scaffold0078 (33-70)||(56183-56220)
[»] scaffold0049 (1 HSPs)
scaffold0049 (33-70)||(72199-72236)


Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 43170505 - 43170288
Alignment:
Q  1 aaaacatatgtaagcatgagatataatgttattctaaaagttgttaaaaagtggttgtacaaatatcattacatatgatgttttcaaataatttcagtaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  43170505 aaaacatatgtaagcatgagataaaatgttattctaaaaattgtcaaaaagtagttgtacaaatatcattacatatgatgttttcaaataatttcactaa 43170406  T
Q  101 ggctggaagactcgaactagctagctagctacctcctattgtcaaaaacatatgtttaccactttaacaataacaatagtatgcctattnnnnnnnntgt 200  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||    
T  43170405 ggctggaagactcgaacta--------gctacctcctattgtcaaaaacatatgtttaccactttaacaataacaatagtatgcctattaaaaaaaatgt 43170314  T
Q  201 tttaactaaaaacattattacaagtt 226  Q
    ||||||||||||||||||||||||||    
T  43170313 tttaactaaaaacattattacaagtt 43170288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 1293119 - 1293153
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  1293119 aaaagttgttaaaaaatggttgtacaaatatcatt 1293153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 8728614 - 8728648
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  8728614 aaaagttgtcaaaaagtggttgtacaaatatcatt 8728648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 41621961 - 41621995
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  41621961 aaaagttgtcaaaaagtggttgtacaaatatcatt 41621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 43057473 - 43057439
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  43057473 aaaagttgtcaaaaagtggttgtacaaatatcatt 43057439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 11306735 - 11306702
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||| ||||||||||||||||    
T  11306735 aaagttgttaaaaagtgattgtacaaatatcatt 11306702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 48314393 - 48314428
Alignment:
Q  35 taaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||||||||||||||||    
T  48314393 taaaagttgttaaaaagtggttgtacaaatatcatt 48314428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 8459651 - 8459618
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||||||||||||||    
T  8459651 aaagttgttaaaaagtggttgtacaaatatcatt 8459618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 28109996 - 28109961
Alignment:
Q  35 taaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||| |||||||||||||||||||||||||    
T  28109996 taaaagttgtcaaaaagtggttgtacaaatatcatt 28109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 6427252 - 6427214
Alignment:
Q  32 ttctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  6427252 ttctaaaagttgtcaaaaagtggttgtataaatatcatt 6427214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 47925375 - 47925341
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||| |||||||||||||||||||||    
T  47925375 aaaagttgttaaagagtggttgtacaaatatcatt 47925341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 48395286 - 48395252
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  48395286 aaaagttgtcaaaaagtggttgtacaaatatcatt 48395252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 49069287 - 49069253
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  49069287 aaaagttgtcaaaaagtggttgtacaaatatcatt 49069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 30941219 - 30941182
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  30941219 tctaaaaattgttacaaagtggttgtacaaatatcatt 30941182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 39875832 - 39875865
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||| ||||||||||    
T  39875832 aaagttgttaaaaagtggttgtataaatatcatt 39875865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 3155881 - 3155847
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  3155881 aaaagttgttaaaaagtggttgtacaaatatcatt 3155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 21526314 - 21526348
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  21526314 aaaagttgttaaaaagtggttgtacaaatatcatt 21526348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 43066627 - 43066661
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  43066627 aaaagttgttaaaaagtggttgtacaaatatcatt 43066661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 3756939 - 3756900
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcattacata 75  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  3756939 aaaagttgtaataaagtggttgtacaaatatcattacata 3756900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 5740807 - 5740841
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  5740807 aaaagttgtcaaaaagtggttgtacaaatatcatt 5740841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 12659090 - 12659056
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  12659090 aaaagttgttaaaaattggttgtacaaatatcatt 12659056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 15116984 - 15117014
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatat 66  Q
    |||||||||||||||||||||||||||||||    
T  15116984 aaaagttgttaaaaagtggttgtacaaatat 15117014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 26629143 - 26629177
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  26629143 aaaagttgtcaaaaagtggttgtacaaatatcatt 26629177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 30170762 - 30170796
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  30170762 aaaagttgtcaaaaagtggttgtacaaatatcatt 30170796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 30943872 - 30943906
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  30943872 aaaagttgttaaaaattggttgtacaaatatcatt 30943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 40102061 - 40102027
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  40102061 aaaagttgtgaaaaagtggttgtacaaatatcatt 40102027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 895971 - 895938
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  895971 aaagttgtcaaaaagtggttgtacaaatatcatt 895938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 1370308 - 1370341
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||| |||||||||||||||||||||||    
T  1370308 aaagttgttacaaagtggttgtacaaatatcatt 1370341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 7678769 - 7678736
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  7678769 aaagttgtcaaaaagtggttgtacaaatatcatt 7678736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 9047093 - 9047126
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  9047093 aaagttgtcaaaaagtggttgtacaaatatcatt 9047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 20996169 - 20996214
Alignment:
Q  25 aatgttattctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||    
T  20996169 aatgttattccaaaagttgttcaaaaatgattgtacaaatatcatt 20996214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 19899348 - 19899314
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  19899348 aaaagttgttaaaaagtggttgtacaaatatcatt 19899314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 53190964 - 53190930
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  53190964 aaaagttgttaaaaagtggttgtacaaatatcatt 53190930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 54222090 - 54222124
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  54222090 aaaagttgttaaaaagtggttgtacaaatatcatt 54222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 25725727 - 25725761
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| |||||||||||||||||||||||    
T  25725727 aaaagttgttagaaagtggttgtacaaatatcatt 25725761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 35824139 - 35824173
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  35824139 aaaagttgttaaaaaatggttgtacaaatatcatt 35824173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 44925159 - 44925197
Alignment:
Q  32 ttctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  44925159 ttctaaaagttgtcaaaaagtggttgttcaaatatcatt 44925197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 50831789 - 50831823
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  50831789 aaaagttgtcaaaaagtggttgtacaaatatcatt 50831823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 51389107 - 51389141
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| |||||||||||||||||||||||    
T  51389107 aaaagttgttacaaagtggttgtacaaatatcatt 51389141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 56215643 - 56215609
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  56215643 aaaagttgtcaaaaagtggttgtacaaatatcatt 56215609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 26885332 - 26885295
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  26885332 tctaaaagttgtcacaaagtggttgtacaaatatcatt 26885295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 42490957 - 42490924
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  42490957 aaagttgtcaaaaagtggttgtacaaatatcatt 42490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 48494935 - 48494968
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||| |||||||||||    
T  48494935 aaagttgttaaaaagtggttgttcaaatatcatt 48494968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 35908448 - 35908420
Alignment:
Q  42 tgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||    
T  35908448 tgttaaaaagtggttgtacaaatatcatt 35908420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 11323947 - 11323913
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  11323947 aaaagttgttaaaaagtggttgtacaaatatcatt 11323913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34628084 - 34628137
Alignment:
Q  16 atgagatataatgttattctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  34628084 atgagaaataaagttat-ctaaaagttgttaaaaaatggttgtacaaatatcatt 34628137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 34271523 - 34271557
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| |||||||||||||||||||||||    
T  34271523 aaaagttgttacaaagtggttgtacaaatatcatt 34271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 48649618 - 48649584
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| |||||||||||||||||||||||    
T  48649618 aaaagttgttagaaagtggttgtacaaatatcatt 48649584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 52963349 - 52963383
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  52963349 aaaagttgttaaaaaatggttgtacaaatatcatt 52963383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 1901956 - 1901993
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  1901956 tctaaaagttgtcacaaagtggttgtacaaatatcatt 1901993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 1911402 - 1911439
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  1911402 tctaaaagttgtcacaaagtggttgtacaaatatcatt 1911439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 32457789 - 32457822
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  32457789 aaagttgtcaaaaagtggttgtacaaatatcatt 32457822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 36869867 - 36869904
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  36869867 tctaaaagttgtcaaaaaatggttgtacaaatatcatt 36869904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 43665660 - 43665626
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  43665660 aaaagttgttaaaaagtggttgtacaaatatcatt 43665626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 1052526 - 1052563
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1052526 tctaaaagttgttaaaaaatggttgtacaaatatcatt 1052563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40602388 - 40602457
Alignment:
Q  1 aaaacatatgtaagcatgagatataatgttattctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| || |||||||| || |||  | || ||||||| |||||||||||||||||||||||||    
T  40602388 aaaacatatgtgagtatgagatagaaggttgctttataagttgtcaaaaagtggttgtacaaatatcatt 40602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 44423015 - 44422982
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||||||||||||||    
T  44423015 aaagttgttaaaaagtggttgtacaaatatcatt 44422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 4036908 - 4036943
Alignment:
Q  35 taaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||| |||||||||||||||||    
T  4036908 taaaagttgttaaaaagtagttgtacaaatatcatt 4036943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 24727623 - 24727657
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  24727623 aaaagttgtcaaaaagtggttgtacaaatatcatt 24727657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 25507293 - 25507259
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  25507293 aaaagttgtcaaaaagtggttgtacaaatatcatt 25507259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 32750036 - 32750002
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  32750036 aaaagttgtgaaaaagtggttgtacaaatatcatt 32750002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 40874294 - 40874328
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  40874294 aaaagttgttaaaaaatggttgtacaaatatcatt 40874328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 43057102 - 43057068
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||| |||||||||||    
T  43057102 aaaagttgttaaaaagtggttgttcaaatatcatt 43057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 45376254 - 45376288
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  45376254 aaaagttgtcaaaaagtggttgtacaaatatcatt 45376288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 30856848 - 30856811
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  30856848 tctaaaagttgtcacaaagtggttgtacaaatatcatt 30856811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 51231339 - 51231373
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||||||||||||||    
T  51231339 aaaagttgttaaaaagtggttgtacaaatatcatt 51231373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 14983821 - 14983788
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||||||||||||||    
T  14983821 aaagttgttaaaaagtggttgtacaaatatcatt 14983788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 25098818 - 25098855
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25098818 tctaaaagttgttacaaagtggttgtacaaatatcatt 25098855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 25989014 - 25989051
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25989014 tctaaaagttgttaaaaaatggttgtacaaatatcatt 25989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 51339730 - 51339767
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| |||||||||||||||||||||||    
T  51339730 tctaaaagttgttacaaagtggttgtacaaatatcatt 51339767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 33694233 - 33694268
Alignment:
Q  35 taaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33694233 taaaagttgttaaaaagtgattgtacaaatatcatt 33694268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 49020437 - 49020471
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  49020437 aaaagttgttaaaaaatggttgtacaaatatcatt 49020471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 15283067 - 15283096
Alignment:
Q  41 ttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||||||||||||||||    
T  15283067 ttgttaaaaagtggttgtacaaatatcatt 15283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 40434055 - 40434010
Alignment:
Q  25 aatgttattctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||  ||||||| | |||||||||||||||||||||||||    
T  40434055 aatgttatttcaaaagttatcaaaaagtggttgtacaaatatcatt 40434010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 45272183 - 45272216
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  45272183 aaagttgtcaaaaagtggttgtacaaatatcatt 45272216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 47059913 - 47059946
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| |||||||||||||||||||    
T  47059913 aaagttgttaaaaaatggttgtacaaatatcatt 47059946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 48872420 - 48872383
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  48872420 tctaaaagttgtcataaagtggttgtacaaatatcatt 48872383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 51571452 - 51571419
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||| |||||||||||||||||||||||||    
T  51571452 aaagttgtcaaaaagtggttgtacaaatatcatt 51571419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 9188974 - 9189011
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9188974 tctaaaagttgttaaaaaatggttgtacaaatatcatt 9189011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 3552187 - 3552221
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  3552187 aaaagttgttaaaaaatggttgtacaaatatcatt 3552221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 8778905 - 8778939
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  8778905 aaaagttgttaaaaaatggttgtacaaatatcatt 8778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 13093664 - 13093630
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  13093664 aaaagttgtcaaaaagtggttgtacaaatatcatt 13093630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 20029299 - 20029265
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||||||||||||| ||||||||||    
T  20029299 aaaagttgttaaaaagtggttgtataaatatcatt 20029265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 26391318 - 26391352
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  26391318 aaaagttgttaaaaaatggttgtacaaatatcatt 26391352  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 31517202 - 31517236
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  31517202 aaaagttgtcaaaaagtggttgtacaaatatcatt 31517236  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 31883337 - 31883371
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  31883337 aaaagttgtcaaaaagtggttgtacaaatatcatt 31883371  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 6435077 - 6435040
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||| | |||||||||||||||||||||||    
T  6435077 tctaaaagttgtcacaaagtggttgtacaaatatcatt 6435040  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 34490388 - 34490351
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  34490388 tctaaaaattgttaaaaaatggttgtacaaatatcatt 34490351  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 263728 - 263762
Alignment:
Q  36 aaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||| |||||||||||||||||||||||    
T  263728 aaaagttgttagaaagtggttgtacaaatatcatt 263762  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 16624 - 16661
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  16624 tctaaaagttgttacaaaatggttgtacaaatatcatt 16661  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 15222 - 15255
Alignment:
Q  37 aaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    ||||||||||||||||| ||||||||||||||||    
T  15222 aaagttgttaaaaagtgattgtacaaatatcatt 15255  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 56220 - 56183
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  56220 tctaaaagttgttacaaaatggttgtacaaatatcatt 56183  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 72199 - 72236
Alignment:
Q  33 tctaaaagttgttaaaaagtggttgtacaaatatcatt 70  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  72199 tctaaaagttgttacaaaatggttgtacaaatatcatt 72236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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