View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11582_low_7 (Length: 643)
Name: NF11582_low_7
Description: NF11582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11582_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 587; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 11 - 621
Target Start/End: Complemental strand, 8805502 - 8804892
Alignment:
| Q |
11 |
cataggacaaaagcttggtttacattggtataggagattgaatattgcaacagaaatagctagtactattgcatcgttacattatgataaatctcctcca |
110 |
Q |
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| T |
8805502 |
cataggacaaaagcttggtttacattggtataggagattgaatattgcaacagaaatagctagtactattgcattgttacattatgataaatctcctcca |
8805403 |
T |
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| Q |
111 |
atattccatcataacctaaagtctagttgcatcttcctaggtgatgatttttctgtcaagattgcaggatttggaatacataattctgatgttaataatt |
210 |
Q |
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| T |
8805402 |
atattccatcataacctaaagtctagttgcatcttcctaggtgatgatttttctgtcaagattgcaggatttggaatacataattctgatgttaataatt |
8805303 |
T |
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| Q |
211 |
atgattacaagaattgtgaaactcgcgaacgctttcggttgtgcaaaaatgatgtctatgacataggtttgttgctactcgagattatctacggaacaaa |
310 |
Q |
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| T |
8805302 |
atgattacaagaattgtgaaactcgcgaacactttcgcttgtgcaaaaatgatgtctacgacataggtttgttgctactcgagattatctacggaacaaa |
8805203 |
T |
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| Q |
311 |
tcagttggactcacctacattagccttgaagaaaattagggatggaaagatcgaagaaattgtcgatccacttcttaattattacgaacaaccgcgtcat |
410 |
Q |
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| T |
8805202 |
tcaattggactcacctacattagccttgaagaaaattagggatggaaagatcgaagaaattgtcgatccacttcttaattattacgaacaaccgcgtcat |
8805103 |
T |
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| Q |
411 |
tgtcaagaacagattcagatcattgctgaccttgccacaagatgttttctgtttagtggagatggaaagatgggaatgattgatgttgctagggaattgg |
510 |
Q |
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| T |
8805102 |
tgtcaagaacagattcagatcattgctgaccttgccacaagatgttttctgtttagtggagatggaaagatgggaatgattgatgttgctagggaattgg |
8805003 |
T |
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| Q |
511 |
ttcatttgacaaaagatagtgttgatggaggaaatgtgaaaggaattgttcttgaagaaacattctcaaattctagtcttcttcaaatgatatctttgtc |
610 |
Q |
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| T |
8805002 |
ttcatttgacaaaagatagtgttgatggaggaaatgtgaaaggaattgctcttgaagaaacattctcaaattctagtcttcttcaaatgatatctttgtc |
8804903 |
T |
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| Q |
611 |
tcctgattcta |
621 |
Q |
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| T |
8804902 |
tcctgattcta |
8804892 |
T |
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