View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11584_high_17 (Length: 382)
Name: NF11584_high_17
Description: NF11584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11584_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 14 - 368
Target Start/End: Original strand, 11046402 - 11046764
Alignment:
| Q |
14 |
gaagagggggtggatattaaaatatttatgattgagttgtacgtagaatttaattggttgtacgataatcatgattgatctaaatggaatacgtatgttc |
113 |
Q |
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| T |
11046402 |
gaagagggggtggatattaaaatatttatgattgagttgtacgtagaatttaattggttgtacgataatcatgattgatctaaatggaatacgtatgttc |
11046501 |
T |
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| Q |
114 |
atcagtgtggggtacttgacattgctgaatttaaattgggtaattcggttagtattagtgtattactatttaccttttttgcattt--------taacaa |
205 |
Q |
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| T |
11046502 |
atcagtgtggggtacttgacattgctgaatttaaattgggtaattcggttagtattagtgtattactatttaccttttttgcattttttgggtgtaacaa |
11046601 |
T |
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| Q |
206 |
ataagatagatttttccaatagagatattatatttgagacattgttgaacattaaatatgagtcgtttttactctattgaatcgcataagattgttggat |
305 |
Q |
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| T |
11046602 |
ataagatagattttttcaatagagatattatatttgagacattgttgaacattaaatatgagtcgtttttactctattgaatcgcataagattgttggat |
11046701 |
T |
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| Q |
306 |
tcatccattctgaatcaagttgtgtttgctattccgtaattggatctcgatttcaaacaacct |
368 |
Q |
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| T |
11046702 |
tcatccattctgaatcaagttgtgtttgctcttccgcaattggatctcgatctcaaacaacct |
11046764 |
T |
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