View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11584_low_26 (Length: 298)
Name: NF11584_low_26
Description: NF11584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11584_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 36604197 - 36603930
Alignment:
| Q |
14 |
cataggatatatctaccctggatatcctgtagctaacatgtgcttcaaggtttatggttacattagtatgacacaagccatcactttcttgcaagacttc |
113 |
Q |
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| T |
36604197 |
cataggatatatctaccctggatatcctgtagctaacatgtgcttcaaggtttatggttacattagtatgacacaagccatcactttcttgcaagacttc |
36604098 |
T |
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| Q |
114 |
aaactaggccactacatgaaaatccctcctagaaccatgttcatggcacaggcttgtcccactaccaaatattcgaatcagaattgtctgcggcccgcaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| ||| |
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| T |
36604097 |
aaactaggccactacatgaaaatccctcctagaaccatgttcatggcacaggtttgtcacactaccaaatattcaaatcagaattgtctgcggcccacaa |
36603998 |
T |
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| Q |
214 |
tttgatgcatttatgcaattagcacatatgtgattgttcgatgaagatcaaatgatctaaacttcaag |
281 |
Q |
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||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
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| T |
36603997 |
tttgacgcatttatgcaattagcacatatgtgatcgttagatgaagatcaaatgatctaaacttcaag |
36603930 |
T |
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