View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11584_low_29 (Length: 257)
Name: NF11584_low_29
Description: NF11584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11584_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 31966986 - 31966783
Alignment:
| Q |
2 |
aaaaatcgattaagagttgggaaagtgttatctccctacagtgcccatttgaaacaattgtcctataattaaatgcataagaattataatacttttaata |
101 |
Q |
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| T |
31966986 |
aaaaatcgattaagagttgggaatgtgttatctccctacagtgtccatttgaaacaattgtcctataattaaatgcataagaattataatacttttaata |
31966887 |
T |
|
| Q |
102 |
gtatttattttatacaaaatgaaataatagacataaacaataatcatttacattaaatatgagataagtaaatgtttttatatttaatttgataagggag |
201 |
Q |
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| T |
31966886 |
gtatttattttatacaaaatgaaataatagacataaacaataatcatttacattaaatatgagataagtaaatgtttttatatttaatttgataagggag |
31966787 |
T |
|
| Q |
202 |
atga |
205 |
Q |
| |
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|||| |
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| T |
31966786 |
atga |
31966783 |
T |
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