View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11585_high_25 (Length: 297)
Name: NF11585_high_25
Description: NF11585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11585_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 46102956 - 46103237
Alignment:
| Q |
1 |
actgattaaaaactgcatcctaacacaacaaatgtctctgcattttttaccatctaaactgcacttataagacaaatttttgtttctttgtatatgtcaa |
100 |
Q |
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| T |
46102956 |
actgattaaaaactgcatcccaacacaacaaatgtctctgcattttttaccatctaaactgcacttataagacaaatttttgtttctttgtatatgtcaa |
46103055 |
T |
|
| Q |
101 |
atttatcaataacaatttattacagaagaatgtaaatagttaaagtactatagaaaaagaaaattaatttcttcaaaaatatcaaagttcaagaattttc |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46103056 |
atttatcaataacaatttatttcagaagaatgtaaatagttaaagtactacagaaaaagaaaattaatttcttcaaaaatatcaaagttcaagaattttc |
46103155 |
T |
|
| Q |
201 |
ttagcaattcatacatgtttcataattttattaaatcatgttcttactagctatattttatacagggatgtttatcaagact |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
46103156 |
ttagcaattcatacatgtttcataattttattaaatcatgttcttactagctatattttatacagggaggtttatcaagact |
46103237 |
T |
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