View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11585_low_23 (Length: 316)
Name: NF11585_low_23
Description: NF11585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11585_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 19 - 294
Target Start/End: Complemental strand, 36381633 - 36381358
Alignment:
| Q |
19 |
ctaagctgagcttcaacaatggtatcattcagttcactgtataaacagattatcagtgtgtttataatagttatttctgttctcatagacggaatatcca |
118 |
Q |
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| T |
36381633 |
ctaagctgagcttcaacaatggtatcattcagttcactgtataaacagattatcagtgtgtttataatagttatttctgttctcatagacagaatatcca |
36381534 |
T |
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| Q |
119 |
tcattacattgacactatgtgctcaactatatcgttaactaactactcatctcaaattgaaatattgnnnnnnntaaaagaaagaaactgataaaacttt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
36381533 |
tcattacattgacactatgtgctcaactatatcgttaactaactactcatctcaaattgaaatattgaaaaaaataaaagaaagaaactgataaaacttt |
36381434 |
T |
|
| Q |
219 |
tgttctatctatttttacatttgacatatctaatgatatttcgtatgcatctcataaaacaatttttctctgcttc |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36381433 |
tgttctatctatttttacatttgacatatctaatgatatttcgtatgcatctcataaaacaatttttctcggcttc |
36381358 |
T |
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