View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11586_high_3 (Length: 304)
Name: NF11586_high_3
Description: NF11586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11586_high_3 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 37593776 - 37593492
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593776 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
37593677 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593676 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
37593577 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593576 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
37593492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 37696167 - 37695883
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37696167 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
37696068 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37696067 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
37695968 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37695967 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgacggttattactataatgattctgt |
37695883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 37532672 - 37532387
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532672 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
37532573 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37532572 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctaacaacaattttagtgggcccttgccaatatcatgcatca |
37532473 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgtg |
286 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37532472 |
agaactttaaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgcgggttattactataatgattctgtg |
37532387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 37823476 - 37823192
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||| |||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
37823476 |
ggaccttggtgacaacaacgttgaggatacatttcctgattggctagaaactctaccagagttacaggtgataagtttacgatcaaataatcttcatggt |
37823377 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37823376 |
gcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccaacatcatgcatca |
37823277 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
285 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
37823276 |
agaactttcaaggaatgatgaatgtgagtgacgaccaaattggtttgcaatacatgggtgactcttattactacaatgattctgt |
37823192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 37401586 - 37401870
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||| |||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
37401586 |
ggaccttggtgacaacaacgttgaggatacatttcctgattggctagaaactctaccagagttacaggtgataagtttacgatcaaataatcttcatggt |
37401685 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37401686 |
gcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccaacatcatgcatca |
37401785 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
37401786 |
agaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactacaatgattctgt |
37401870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 37639318 - 37639034
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||| |||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
37639318 |
ggaccttggtgacaacaacgttgaggatacatttcctgattggctagaaactctaccagagttacaggtgataagtttacgatcaaataatcttcatggt |
37639219 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37639218 |
gcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccaacatcatgcatca |
37639119 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | | |||||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
37639118 |
agaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactacaatgattctgt |
37639034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 37393465 - 37393723
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||| |||||||||| |
|
|
| T |
37393465 |
ggaccttggtgacaacaacatagaggatacttttcccaattggctagaaactctacaagagttacaggtgctaagtttacgatcaaatcatcttcatggg |
37393564 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
37393565 |
tcaatcacatgttctagcaccaagcatccatttcctaagttgagaatttatgatgtctctagtaacaattttagtggccccttgccaacatcatgcttca |
37393664 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggt |
259 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
37393665 |
agaactttcaaggaatgatggatgtgaataacagccaaattggtttgcaatacatgggt |
37393723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 37702255 - 37702023
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||||| || || || |||||||||||| ||||||||||| |
|
|
| T |
37702255 |
ggaccttggtgacaacaacatagaggatacatttcccaattggctagaaactttaccagagttacaggtgctgagtttacgatcaaatcatcttcatggt |
37702156 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
37702155 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgcctctaacaacaattttagtggccccttgccaacatcatgcatca |
37702056 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgaca |
233 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||| |
|
|
| T |
37702055 |
agaactttcaaggaatgattaatgtaaatgaca |
37702023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 37711076 - 37710823
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||| |||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
37711076 |
ggaccttggtgacaacaacgttgaggatacatttcctgattggctagaaactctaccagagttacaggtgataagtttacgatcaaataatcttcatggt |
37710977 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37710976 |
gcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagtgggcccttgccagcatcatgcatca |
37710877 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaataca |
254 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||| | ||||||||| |
|
|
| T |
37710876 |
agaactttcaaggaatgatgaaggtgaatgacaaaaaaattgatctgcaataca |
37710823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 37382914 - 37383199
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||| ||||||||| ||||||| || ||||| |||||||| |||||||||||||| ||||| || || || ||| |||||||||| |||||||| |
|
|
| T |
37382914 |
ggaccttggagacaacaacgtagaggatacttttcccaattggcttgaaactctacaagaattacaggtgctcagtttaagatcaaataaacttcatggc |
37383013 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
|||||||| || ||||||||||| ||| ||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
37383014 |
gcaatcacatgctctagcaccaaacatccatttcccaagttgagaatttttgatgtctctaacaacaattttattgggcccttgccaacatcgtgcatca |
37383113 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgtg |
286 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| | | |||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
37383114 |
agaattttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtaagtccaattactataatgattctgtg |
37383199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 37435282 - 37434997
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || || || ||| |||||||||| ||| ||||| |
|
|
| T |
37435282 |
ggaccttggatacaacaacatagaggatacatttcccaattggctagaaactctacaagagttacaggtactcagtttaagatcaaataaacttaatggt |
37435183 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgt-ttctatcaacaattttagtgggcccttgccaacatcatgcatc |
199 |
Q |
| |
|
||||||| ||||||| |||||| ||| | ||| ||||||| ||||||||||| | ||| | |||||||||||||| |||||||||||||||| ||| |
|
|
| T |
37435182 |
tcaatcacctgttctaacaccaaccatcctttttctaagttaagaatttttgacatcttcggt-aacaattttagtggatccttgccaacatcatgtatc |
37435084 |
T |
|
| Q |
200 |
aagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgtg |
286 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
37435083 |
aagaactttcaaggaatgatgaatgtgaatgatagccagattggtttgcaatacatgggtaagaacaattactataatgattctgtg |
37434997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 37413753 - 37413910
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
37413753 |
ggaccttggtgacaacaatatagaggatacatttcccaattggctagaaactctacaagagttacaggtgctaagtttacgatcaaataatcttcatggt |
37413852 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgttt |
158 |
Q |
| |
|
|||||||| ||||||||||| |||||| ||||||| ||||||||||| ||| |||||| |
|
|
| T |
37413853 |
gcaatcacctgttctagcacaaagcatacatttcccaagttgagaatattttatgttt |
37413910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 286
Target Start/End: Complemental strand, 37428543 - 37428339
Alignment:
| Q |
81 |
gatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcc |
180 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| ||||| ||| |||| || |||||||||||||| || | | || || | ||||||||| || |
|
|
| T |
37428543 |
gatcaaataaactgcatggtacaatcacttgttctatgaccaaacatccattccc-aagttgagaattttcgacatctataataaaatttttagtggtcc |
37428445 |
T |
|
| Q |
181 |
cttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgat |
280 |
Q |
| |
|
|||||| ||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||| || |||||||||||||| |
|
|
| T |
37428444 |
cttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactataatgat |
37428345 |
T |
|
| Q |
281 |
tctgtg |
286 |
Q |
| |
|
|||||| |
|
|
| T |
37428344 |
tctgtg |
37428339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 26437767 - 26437679
Alignment:
| Q |
129 |
catttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatcaagaactttcaaggaatg |
217 |
Q |
| |
|
|||||||||||||||| |||||||||| || | ||| ||||||||||| | ||||| ||| | | |||||| |||||| |||||||| |
|
|
| T |
26437767 |
catttcctaagttgagggtttttgatgtctccaacaataattttagtggctctttgcccacaacgtacatcaaaaactttaaaggaatg |
26437679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 26451136 - 26451048
Alignment:
| Q |
129 |
catttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatcaagaactttcaaggaatg |
217 |
Q |
| |
|
|||||||||||||||| |||||||||| || | ||| ||||||||||| | ||||| ||| | | |||||| |||||| |||||||| |
|
|
| T |
26451136 |
catttcctaagttgagggtttttgatgtctccaacaataattttagtggctctttgcccacaacgtacatcaaaaactttaaaggaatg |
26451048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 14552943 - 14552686
Alignment:
| Q |
2 |
gaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggtg |
101 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| || | |
|
|
| T |
14552943 |
gaccttggtgacaacagcatagaggatacatttcccaattggctagaaactctacaagagttacaagtgctaagtttacgatcaaatcatcttcacggag |
14552844 |
T |
|
| Q |
102 |
caatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatcaa |
201 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14552843 |
caatcacctgttctagcatcaagcattcatttcctaagttgagaatttttgatgtctctaacaacaattttagtggcaccttgccaacatcatgcatcaa |
14552744 |
T |
|
| Q |
202 |
gaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggt |
259 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14552743 |
gaactttcaaggaatgatgaacgtgaatgacagccaaattggtttgcaatacatgggt |
14552686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 166; Significance: 7e-89; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16843584 - 16843837
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||||| || || |||||||| |||||||||||||| |
|
|
| T |
16843584 |
ggaccttggtgacaacaacatagaggatacatttcccagttggcttgaaactctacaagagttacaggtactcgttttacgatctaataatcttcatgga |
16843683 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16843684 |
gtaatcacttgttctagcaccaagcatccatttcctaagttgagaatttttgatgtctctaacaacaattttagtggcaccttgccaacatcatgcatcc |
16843783 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaataca |
254 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
16843784 |
agaactttcaaggaatgatgaatgtggatgatagccagattggtttgcaataca |
16843837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 16846252 - 16846536
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||||| || || || ||| | |||||||| ||| ||||| |
|
|
| T |
16846252 |
ggaccttggtgacaacaacatagaggatacatttcccagttggcttgaaactctacaagagttacatgtactcagtttaaggtcaaataaactttatggt |
16846351 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgt-ttctatcaacaattttagtgggcccttgccaacatcatgcatc |
199 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||| || ||||||||||| || | ||| || ||||| || ||||| || |||||||||||||| ||| |
|
|
| T |
16846352 |
tcaatcacatgttctagcaccaagcatccatttcc-aaattgagaattttggacatcttcgat-aacaaattcagtggaccgttgccaacatcatgtatc |
16846449 |
T |
|
| Q |
200 |
aagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgtg |
286 |
Q |
| |
|
||||| ||||||||||||||||| | |||||| | ||| ||||||||| |||| ||| || |||||||||||||||||||| |
|
|
| T |
16846450 |
aagaattttcaaggaatgatgaacgcgaatgataataaaactggtttgcagtacatgggaaaggtcaattactataatgattctgtg |
16846536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 24218319 - 24218604
Alignment:
| Q |
1 |
ggaccttggtgacaacaacatagaggacacatttccaaattggctagaaactctacaagagttacaagttctaagcttacgatcaaataatcttcatggt |
100 |
Q |
| |
|
||||||||| ||||||| |||| | || |||||||| |||||| ||||| ||| ||||||||||| || || || |||||||||||| ||||||||||| |
|
|
| T |
24218319 |
ggaccttggagacaacatcataaacgatacatttcccaattggttagaagttctgcaagagttacaggtactcagtttacgatcaaatcatcttcatggt |
24218418 |
T |
|
| Q |
101 |
gcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcccttgccaacatcatgcatca |
200 |
Q |
| |
|
| ||||||||||||||||||||| || |||||||| ||| ||||||||| ||||| ||| || ||||| |||| ||| |||||||||| ||| ||| |
|
|
| T |
24218419 |
ggaatcacttgttctagcaccaaacaatcatttccgaagatgagaatttacgatgtctctggtaataatttccgtggccccgtgccaacatcttgcctca |
24218518 |
T |
|
| Q |
201 |
agaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgattctgtg |
286 |
Q |
| |
|
|||| |||||||||||||| |||||||||| || || |||||||||||||| |||| || |||| ||||||||||||||| |
|
|
| T |
24218519 |
agaattttcaaggaatgattaatgtgaatgtcaataaatctggtttgcaatacatgggtaaggccaattattataatgattctgtg |
24218604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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