View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1158_high_75 (Length: 251)

Name: NF1158_high_75
Description: NF1158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1158_high_75
NF1158_high_75
[»] chr1 (3 HSPs)
chr1 (10-222)||(28127748-28127961)
chr1 (10-222)||(28164431-28164643)
chr1 (10-217)||(268426-268633)
[»] chr6 (39 HSPs)
chr6 (20-217)||(26646377-26646574)
chr6 (20-217)||(26752345-26752542)
chr6 (21-222)||(26802335-26802536)
chr6 (10-222)||(27677696-27677908)
chr6 (18-222)||(27593110-27593314)
chr6 (10-222)||(27678839-27679051)
chr6 (18-222)||(27611092-27611296)
chr6 (10-222)||(27706484-27706696)
chr6 (18-222)||(27718469-27718673)
chr6 (21-222)||(28781032-28781233)
chr6 (10-222)||(27698576-27698788)
chr6 (18-222)||(27724935-27725139)
chr6 (10-222)||(26622869-26623081)
chr6 (10-222)||(26728847-26729059)
chr6 (10-221)||(26142759-26142970)
chr6 (10-222)||(26884056-26884268)
chr6 (18-222)||(27604795-27604999)
chr6 (30-222)||(28786171-28786363)
chr6 (30-222)||(28792292-28792484)
chr6 (21-222)||(31284181-31284382)
chr6 (10-222)||(27229125-27229337)
chr6 (10-221)||(25538434-25538645)
chr6 (10-221)||(25579613-25579824)
chr6 (10-221)||(25481636-25481847)
chr6 (10-221)||(26048739-26048950)
chr6 (10-221)||(26055820-26056031)
chr6 (10-221)||(26069908-26070119)
chr6 (10-221)||(26075790-26076001)
chr6 (10-222)||(26655882-26656094)
chr6 (10-222)||(26761853-26762065)
chr6 (16-220)||(27338153-27338357)
chr6 (16-220)||(27398893-27399097)
chr6 (18-214)||(28139442-28139638)
chr6 (10-217)||(26861514-26861721)
chr6 (21-196)||(25507002-25507171)
chr6 (16-148)||(28226917-28227049)
chr6 (16-150)||(28234529-28234663)
chr6 (10-74)||(26823881-26823945)
chr6 (10-222)||(27531279-27531491)
[»] chr8 (1 HSPs)
chr8 (10-217)||(29273852-29274059)
[»] chr4 (5 HSPs)
chr4 (10-222)||(18724154-18724366)
chr4 (10-222)||(18731573-18731785)
chr4 (10-222)||(18679636-18679848)
chr4 (10-222)||(18699469-18699681)
chr4 (10-222)||(18655546-18655758)
[»] scaffold0349 (2 HSPs)
scaffold0349 (10-222)||(3503-3716)
scaffold0349 (25-222)||(14452-14649)
[»] scaffold0277 (2 HSPs)
scaffold0277 (21-222)||(13725-13926)
scaffold0277 (18-222)||(4761-4965)
[»] scaffold1254 (1 HSPs)
scaffold1254 (21-222)||(10-211)
[»] scaffold0419 (1 HSPs)
scaffold0419 (21-222)||(7418-7619)
[»] scaffold0038 (2 HSPs)
scaffold0038 (16-148)||(27415-27547)
scaffold0038 (16-150)||(34690-34824)


Alignment Details
Target: chr1 (Bit Score: 154; Significance: 9e-82; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 28127748 - 28127961
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttctt-ctcctc 108  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||| | || ||||| |||||||| || ||||||    
T  28127748 aacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggcctttaaaagtgacggtgtgatttttttctcctc 28127847  T
Q  109 tctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaa 208  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28127848 tctcaagattacaatcatcaatgaatgtgtggattcccttgtcataaagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaa 28127947  T
Q  209 gctgaggaacactt 222  Q
    ||||||||||||||    
T  28127948 gctgaggaacactt 28127961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 28164431 - 28164643
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||||| ||||||  ||||||| ||||||||||||||||||    
T  28164431 aacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttgatgaatgacggtgtgatttcttctcctct 28164530  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
    |||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||     
T  28164531 ctcaagatcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatggccagtgaaaccgtcacgagtgtcactgcccctaaaa 28164630  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  28164631 ctgaggaacactt 28164643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 268426 - 268633
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| | ||| | | ||| | | ||||||| || |||||    
T  268426 aacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 268525  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||| |||||||||||| ||||||||||||||||||   || |||||||||||||||||| | ||||| ||||||||||||| ||| ||||||    
T  268526 ttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatggccaataaaaccctcacgagtgtcaccgcctctgaag 268625  T
Q  210 ctgaggaa 217  Q
     |||||||    
T  268626 ttgaggaa 268633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 26646574 - 26646377
Alignment:
Q  20 agaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatca 119  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||  | ||| | ||||||||| |||||||||| |||||||    
T  26646574 agaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagatca 26646475  T
Q  120 caatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    |||||||||||||| ||||| ||||||||||||   || |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  26646474 caatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgaggaa 26646377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 26752542 - 26752345
Alignment:
Q  20 agaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatca 119  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||  | ||| | ||||||||| |||||||||| |||||||    
T  26752542 agaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagatca 26752443  T
Q  120 caatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    |||||||||||||| ||||| ||||||||||||   || |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  26752442 caatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgaggaa 26752345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 26802536 - 26802335
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  | ||| | ||||||||| |||||||| | |||||||     
T  26802536 gaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctttgaagatcat 26802437  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
      ||||||||||| || |||||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || |||||||||||    
T  26802436 tgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaaccgtaccgagtgtcagtgcccctaaaactgaggaacac 26802337  T
Q  221 tt 222  Q
    ||    
T  26802336 tt 26802335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 27677696 - 27677908
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||||| |||||| || ||| | ||||||||| || |||||    
T  27677696 aacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccctct 27677795  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||  ||  |||||||| |||||||||||||||||||| || ||||||||||||| ||| ||||||||||  ||||||||||| || |||||     
T  27677796 ttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaa 27677895  T
Q  210 ctgaggaacactt 222  Q
     ||||||| ||||    
T  27677896 ttgaggaatactt 27677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 27593110 - 27593314
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||| || ||| | ||||||||| | |||||| | ||||     
T  27593110 gaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatttcctctttgaagac 27593209  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| |||| |||||||||||||   || ||||||||||||| ||| ||||||||||  ||||||||||| || ||||| ||||||||    
T  27593210 cattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaa 27593309  T
Q  218 cactt 222  Q
     ||||    
T  27593310 tactt 27593314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 27679051 - 27678839
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||| || ||| | ||||||||| ||||||||    
T  27679051 aacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatctcctct 27678952  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||| ||   | ||||||||| |||| |||||||||||||   || |||||||||||||  || ||||||||||  ||||||||||| || |||||     
T  27678951 ttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaaccgtaccgagtgtcacttcctctgaaa 27678852  T
Q  210 ctgaggaacactt 222  Q
    |||||||| ||||    
T  27678851 ctgaggaatactt 27678839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 27611092 - 27611296
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| ||||||||   |||||    
T  27611092 gaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctcttggaagat 27611191  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| || |||||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || ||||||||    
T  27611192 cattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaa 27611291  T
Q  218 cactt 222  Q
    |||||    
T  27611292 cactt 27611296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 27706484 - 27706696
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||| |||||| || ||| | ||||||||| || | |||    
T  27706484 aacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccttct 27706583  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||  ||  |||||||| |||||||||||||||||||| |  ||||||||||||| ||| ||||||||||  ||||||||||  || |||||     
T  27706584 ttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaaaagccttgtagagattgcctgtgaaaccgtaccgagtgtcacctcctctgaaa 27706683  T
Q  210 ctgaggaacactt 222  Q
    |||||||| ||||    
T  27706684 ctgaggaatactt 27706696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 27718469 - 27718673
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| |||||||| | |||||    
T  27718469 gaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagat 27718568  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| || |||||||||||||||   || |||||||||||||  || || |||| ||  ||||||||| ||||||| || ||||||||    
T  27718569 cattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaactgtgccgagtgtcagtgcccctaaaactgaggaa 27718668  T
Q  218 cactt 222  Q
    |||||    
T  27718669 cactt 27718673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 28781233 - 28781032
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||     
T  28781233 gaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 28781134  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
      ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || |||||||||||    
T  28781133 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 28781034  T
Q  221 tt 222  Q
    ||    
T  28781033 tt 28781032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 27698576 - 27698788
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| ||||||||    
T  27698576 aacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 27698675  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| || |||||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| ||     
T  27698676 ttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaa 27698775  T
Q  210 ctgaggaacactt 222  Q
    |||| ||||||||    
T  27698776 ctgatgaacactt 27698788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 27724935 - 27725139
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| |||||||| | |||||    
T  27724935 gaagaataggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagat 27725034  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| || |||||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || || |||||    
T  27725035 cattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaa 27725134  T
Q  218 cactt 222  Q
    |||||    
T  27725135 cactt 27725139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 26623081 - 26622869
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||| | |||||||||  |||||||||||||||||||||  |||| ||||| ||  | ||| ||| ||| | | ||||||| || |||||    
T  26623081 aacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctct 26622982  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||| |||||||||||| ||||||||||||||||||   || |||||||||||||  |||||||||||||  |||||||||||||| |||||     
T  26622981 ttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaa 26622882  T
Q  210 ctgaggaacactt 222  Q
    || ||||||||||    
T  26622881 cttaggaacactt 26622869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 26729059 - 26728847
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||| | |||||||||  |||||||||||||||||||||  |||| ||||| ||  | ||| ||| ||| | | ||||||| || |||||    
T  26729059 aacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctct 26728960  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||| |||||||||||| ||||||||||||||||||   || |||||||||||||  |||||||||||||  |||||||||||||| |||||     
T  26728959 ttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaa 26728860  T
Q  210 ctgaggaacactt 222  Q
    || ||||||||||    
T  26728859 cttaggaacactt 26728847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26142970 - 26142759
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  |||||||||||||| ||||||||| ||| | ||||||||| ||||||||    
T  26142970 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctct 26142871  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |||||||||  |||||||||||| ||  | |||||||||||| | || ||||| |||||||  || || ||   ||  ||||||||||||||||||||     
T  26142870 ttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgagtgtcactgcccctgaaa 26142771  T
Q  210 ctgaggaacact 221  Q
    ||||||||||||    
T  26142770 ctgaggaacact 26142759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 26884268 - 26884056
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| ||||||||| ||||||| |  |||||||||||| |||||||||||||| ||||||  | ||| | |||||||||   ||||||    
T  26884268 aacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcgcttcctct 26884169  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
       ||||| |  |||||||||||| |||||||||||||||| |   || |||||||||||||  ||||||||||| |  ||||||||||| || |||||     
T  26884168 tggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaaccataccgagtgtcacttcctctgaaa 26884069  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  26884068 ctgaggaacactt 26884056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 27604795 - 27604999
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||||||||||| ||||||||||||||||||||||||||  | ||||| |||||| |||||| || ||  | ||||||||| ||||||||   |||||    
T  27604795 gaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttcatctcctcttcgaagat 27604894  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| || || ||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || || |||||    
T  27604895 cattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaa 27604994  T
Q  218 cactt 222  Q
    |||||    
T  27604995 cactt 27604999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 222
Target Start/End: Complemental strand, 28786363 - 28786171
Alignment:
Q  30 tagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcacaatcatcaa 129  Q
    |||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||   |||||||    
T  28786363 tagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaa 28786264  T
Q  130 tgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacactt 222  Q
    |||| || | |||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || |||||||||||||    
T  28786263 tgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 28786171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 222
Target Start/End: Complemental strand, 28792484 - 28792292
Alignment:
Q  30 tagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcacaatcatcaa 129  Q
    |||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||   |||||||    
T  28792484 tagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaa 28792385  T
Q  130 tgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacactt 222  Q
    |||| || | |||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || |||||||||||||    
T  28792384 tgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 28792292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 31284382 - 31284181
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    |||||||||||||||  ||||||||| || ||||||||  |||| ||||||||| | ||| | | ||| | ||||||||| || ||||| | ||| ||||    
T  31284382 gaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctctttgaagttcac 31284283  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
     |||||||||||| ||||||||||||||||||   || ||||||||||||| ||| |||||||| |  ||||||||||| |||||||| || ||||| ||    
T  31284282 tatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaaccataccgagtgtcacttcccctgaaactaaggaatac 31284183  T
Q  221 tt 222  Q
    ||    
T  31284182 tt 31284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 27229337 - 27229125
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||   |||||| |||||| ||||||| | ||| | ||||||||| ||||||||    
T  27229337 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctcctct 27229238  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| || |||||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| ||     
T  27229237 ttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtgccgagtgtcagtgcccctaaaa 27229138  T
Q  210 ctgaggaacactt 222  Q
    || ||||||||||    
T  27229137 ctaaggaacactt 27229125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 25538645 - 25538434
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||| |||||||||| ||| ||||||||| ||| | ||||||||| ||||||||    
T  25538645 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaagtgatggtgtgatttcatctcctct 25538546  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |||||||||  |||||| ||||| ||    |||||||||||| | || ||||| |||||||  || || ||   ||  ||||||||||||||||||||     
T  25538545 ttcaagatcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgagtgtcactgcccctgaaa 25538446  T
Q  210 ctgaggaacact 221  Q
    ||||||||||||    
T  25538445 ctgaggaacact 25538434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 25579824 - 25579613
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  |||||||||||||| ||||||||| ||| | ||||||||| ||||||||    
T  25579824 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctct 25579725  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||  |||||||| ||| ||  | |||||||||||| | || ||||| |||||||  || || |||  ||  |||||||||||||| |||||     
T  25579724 ttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggtaaaagtgttgcgagtgtcactgcctctgaaa 25579625  T
Q  210 ctgaggaacact 221  Q
    ||||||||||||    
T  25579624 ctgaggaacact 25579613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 25481847 - 25481636
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||| ||||  |||||||||||||| ||||||||| ||| | ||||||||| ||||||||    
T  25481847 aacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctct 25481748  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| ||  | |||||||||||| | || ||||| |||||||  || || |||  ||  ||||||||||||||||||||     
T  25481747 ttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaa 25481648  T
Q  210 ctgaggaacact 221  Q
     |||||||||||    
T  25481647 ttgaggaacact 25481636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26048950 - 26048739
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  |||||||||| ||| ||||||||| |   | ||||||||| ||||||||    
T  26048950 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctcctct 26048851  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |||||||||  |||||||||||| ||    ||||||||||||  ||| ||||| |||||||  || || |||  ||  ||||||||||||||||||||     
T  26048850 ttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaa 26048751  T
Q  210 ctgaggaacact 221  Q
    ||||||||||||    
T  26048750 ctgaggaacact 26048739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26056031 - 26055820
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||   ||||||||| ||| ||||||||| ||| ||||||||||| ||||||||    
T  26056031 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctcctct 26055932  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| || |  |||||||||||| | || ||||| |||||||  || || |||  ||  ||||||||||||||||||||     
T  26055931 ttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaa 26055832  T
Q  210 ctgaggaacact 221  Q
     |||||||||||    
T  26055831 atgaggaacact 26055820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26070119 - 26069908
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  |||||||||| ||| ||||||||| |   | ||||||||| ||||||||    
T  26070119 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgggtgtgatttcatctcctct 26070020  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |||||||||  |||||||||||| ||    ||||||||||||  ||| ||||| |||||||  || || |||  ||  ||||||||||||||||||||     
T  26070019 ttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaa 26069920  T
Q  210 ctgaggaacact 221  Q
    ||||||||||||    
T  26069919 ctgaggaacact 26069908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26076001 - 26075790
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||   ||||||||| ||| ||||||||| ||| ||||||||||| ||||||||    
T  26076001 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatgatgtgatttcatctcctct 26075902  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| || |  |||||||||||| | || ||||| |||||||  || || |||  ||  ||||||||||||||||||||     
T  26075901 ttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaa 26075802  T
Q  210 ctgaggaacact 221  Q
     |||||||||||    
T  26075801 ttgaggaacact 26075790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 26656094 - 26655882
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  | |||||||||||| |||| || | ||| | ||||||||| ||||||||    
T  26656094 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26655995  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
       |||||||   ||||||||||| || ||||||||||| |||   || ||||||||||||| ||| || |||||||  || |||||| ||||||| ||     
T  26655994 gagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaa 26655895  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  26655894 ctgaggaacactt 26655882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 26762065 - 26761853
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| |||||||||  |||||| |  |||||||||||  | |||||||||||| |||| || | ||| | ||||||||| ||||||||    
T  26762065 aacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26761966  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
       |||||||   ||||||||||| || ||||||||||| |||   || ||||||||||||| ||| || |||||||  || |||||| ||||||| ||     
T  26761965 gagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaa 26761866  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  26761865 ctgaggaacactt 26761853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 27338153 - 27338357
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||||||   |||||| |  ||||| |||||  |||| ||||||||| ||||||||| ||| | |||| |||| |||||||| |||||    
T  27338153 atgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctcctctttcaag 27338252  T
Q  116 atcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgagg 215  Q
    |||    ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || ||||||| | |||||||| || |||| || ||||||    
T  27338253 atcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgagg 27338352  T
Q  216 aacac 220  Q
    |||||    
T  27338353 aacac 27338357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 27398893 - 27399097
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||||||   |||||| |  ||||| |||||  |||| ||||||||| ||||||||| ||| | |||| |||| |||||||| |||||    
T  27398893 atgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgtgctttcatctcctctttcaag 27398992  T
Q  116 atcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgagg 215  Q
    |||    ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || ||||||| | |||||||| || |||| || ||||||    
T  27398993 atcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgagg 27399092  T
Q  216 aacac 220  Q
    |||||    
T  27399093 aacac 27399097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 28139638 - 28139442
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||||||||||||||||| ||||||||||| || |||||  |||||||||||||| | || || | ||||| ||  ||||| || ||||  | ||| |    
T  28139638 gaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggcttttacgagtgacggtgatatttcgtcacctccttgaagct 28139539  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgag 214  Q
    | | ||||||||| || |||||||||||   ||||   || || ||||||||||  ||||||||||||  ||||||||||||||| |||||||||||    
T  28139538 ccctatcatcaataaaagtgtggattccacagtcacgaagagctttgtagagatttccagtgaaaccgaaacgagtgtcactgcctctgaagctgag 28139442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 26861721 - 26861514
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||| |||||||||||||||  ||||||||||||||| |||||| |||| ||||||||| | ||| | | |||   | ||||||| || |||||    
T  26861721 aacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctct 26861622  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||| |||||| ||||| ||||| ||||||||||||   || |||||||||||||  || || ||||| |  ||||||||||| || |||||     
T  26861621 ttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaaccataccgagtgtcacttcctctgaaa 26861522  T
Q  210 ctgaggaa 217  Q
    ||||||||    
T  26861521 ctgaggaa 26861514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 25507002 - 25507171
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    ||||||||||||||||||||||  || |||||||||||  |||||||||||||| |  |||| | ||| | ||||||||| |||||||| |  |||||||    
T  25507002 gaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtgatttcatctcctcttttcagatcac 25507101  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtc 196  Q
    |||||||||      |||| |||||||||||||  || ||| |||||||||||| ||| |||| |  |||||||||    
T  25507102 aatcatcaa------tgtgaattcccttgtcatatagagccgtgtagagatggctagtaaaacggctacgagtgtc 25507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 28227049 - 28226917
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||| |||||||| || |||||||| |||||  ||||||||||||||||||||| || ||| ||||| ||||| || ||||  | |||    
T  28227049 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatgatgttatttcatcacctccttgaag 28226950  T
Q  116 atcacaatcatcaatgaatgtgtggattccctt 148  Q
     || | |||||||| ||||||||| ||||||||    
T  28226949 ctctctatcatcaaagaatgtgtgaattccctt 28226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 28234663 - 28234529
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||| |||||||| || |||||||| |||||  |||| ||||||||| |||||| || ||| | ||| ||||| |||||||  | |||    
T  28234663 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaag 28234564  T
Q  116 atcacaatcatcaatgaatgtgtggattcccttgt 150  Q
     || |  ||||||||||| ||||||||||||||||    
T  28234563 ctccctgtcatcaatgaaggtgtggattcccttgt 28234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 26823945 - 26823881
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatg 74  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||  |||| |||||||||    
T  26823945 aacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcctagactcttcaatg 26823881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 27531279 - 27531491
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||| ||||||||   |||||| || |||||||||||  |||||| ||||||| | ||    | ||| | ||||||||| ||||||||    
T  27531279 aacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtgatggtgtgatttcatctcctct 27531378  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | |||||||   ||||||||||| || | |||||||||||||   || |||||||||||||  || || |||||||  ||||||||   |||||| ||     
T  27531379 ttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtccgcgcccctaaaa 27531478  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  27531479 ctgaggaacactt 27531491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 29273852 - 29274059
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| | | ||| ||| ||||||| || |||||    
T  29273852 aacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcgagtgatgatttgatttcatcccctct 29273951  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     | ||| |||| |||||||||||| ||||||||||||||||||   || | |||||||||||||||| | ||||||||||||||||||| ||| || |||    
T  29273952 ttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagatggccaataaaaccgtcacgagtgtcaccgcctctaaag 29274051  T
Q  210 ctgaggaa 217  Q
     |||||||    
T  29274052 ttgaggaa 29274059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 18724154 - 18724366
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||| | ||| | | ||| | | ||||||| || |||||    
T  18724154 aacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 18724253  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |  || ||||  ||||||||||| ||||||||||||||||||   || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  18724254 ttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaag 18724353  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  18724354 ctgaggaacactt 18724366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 18731573 - 18731785
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||| | ||| | | ||| | | ||||||| || |||||    
T  18731573 aacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 18731672  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |  || ||||  ||||||||||| ||||||||||||||||||   || ||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18731673 ttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatggccagtaaaaccgtcacgagtgtcactgcccctgaag 18731772  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  18731773 ctgaggaacactt 18731785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 18679636 - 18679848
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||| | ||| | | ||| | | ||||||| || |||||    
T  18679636 aacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 18679735  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |  || ||||  ||||||||||| ||||||||||| ||||||   || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  18679736 ttgcaggtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaag 18679835  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  18679836 ctgaggaacactt 18679848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 18699469 - 18699681
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||| | ||| | | ||| | | ||||||| || || ||    
T  18699469 aacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatccccact 18699568  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |  || ||||  ||||||||||| ||||||||||||||||||   || || ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  18699569 ttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaag 18699668  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  18699669 ctgaggaacactt 18699681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 18655546 - 18655758
Alignment:
Q  10 aacaatatgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctct 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||  |||| |||| |||| | ||| | | ||| | | ||||||| || || ||    
T  18655546 aacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcgagtgatggtttgatttcatccccact 18655645  T
Q  110 ctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaag 209  Q
     |  || ||||  ||||||||||| ||||||||||||||||||   || || ||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  18655646 ttgcagctcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaag 18655745  T
Q  210 ctgaggaacactt 222  Q
    |||||||||||||    
T  18655746 ctgaggaacactt 18655758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 3503 - 3716
Alignment:
Q  10 aacaatatgaagaagaggcatag-ttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctc 108  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| |||||||    
T  3503 aacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctc 3602  T
Q  109 tctcaagatcacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaa 208  Q
    | | |||||||   ||||||||||| || |||||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| ||    
T  3603 tttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaa 3702  T
Q  209 gctgaggaacactt 222  Q
     || ||||||||||    
T  3703 actaaggaacactt 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 14452 - 14649
Alignment:
Q  25 aggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcacaatc 124  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||| | ||||||||| |||||||| | |||||||   ||    
T  14452 aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtc 14551  T
Q  125 atcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacactt 222  Q
    ||||||||| || |||||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || |||| ||||||||    
T  14552 atcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacactt 14649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 13725 - 13926
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    |||| ||| |||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||     
T  13725 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 13824  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
      ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || |||||||||||    
T  13825 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 13924  T
Q  221 tt 222  Q
    ||    
T  13925 tt 13926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 4761 - 4965
Alignment:
Q  18 gaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagat 117  Q
    |||||| ||||||||  ||||||||||||||||||||||||  ||||||| |||||| |||||   |  || | ||||||||| |||||||| | |||||    
T  4761 gaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcggagggatggtgtgatttcatctcctctttgaagat 4860  T
Q  118 cacaatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaa 217  Q
    ||   ||||||||||| || | |||||||||||||   || |||||||||||||  || || |||||||  ||||||||| ||||||| || ||||||||    
T  4861 cattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcaatgcccctaaaactgaggaa 4960  T
Q  218 cactt 222  Q
    |||||    
T  4961 cactt 4965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 10 - 211
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    |||| ||| |||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||     
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 109  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
      ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || || ||||||||    
T  110 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacac 209  T
Q  221 tt 222  Q
    ||    
T  210 tt 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 7619 - 7418
Alignment:
Q  21 gaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaagatcac 120  Q
    |||| ||| |||||||||||||||||||||||||||||  |||||||||| ||| ||||||  | ||| | ||||||||| |||||||| | |||||||     
T  7619 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 7520  T
Q  121 aatcatcaatgaatgtgtggattcccttgtcatcgagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacac 220  Q
      ||||||||||| || | |||||||||||||   || ||||||||||||| ||| || |||||||  ||||||||| ||||||| || || ||||||||    
T  7519 tgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacac 7420  T
Q  221 tt 222  Q
    ||    
T  7419 tt 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 27547 - 27415
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||| |||||||| || |||||||| |||||  ||||||||||||||||||||| || ||| ||||| ||||| || ||||  | |||    
T  27547 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatgatgttatttcatcacctccttgaag 27448  T
Q  116 atcacaatcatcaatgaatgtgtggattccctt 148  Q
     || | |||||||| ||||||||| ||||||||    
T  27447 ctctctatcatcaaagaatgtgtgaattccctt 27415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 34824 - 34690
Alignment:
Q  16 atgaagaagaggcatagttgatagaaaacacaggaataaaaattttagattcttcaatgaccttgacaaatgacgatgtgatttcttctcctctctcaag 115  Q
    |||||||||| ||||| |||||||| || |||||||| |||||  |||| ||||||||| |||||| || ||| | ||| ||||| |||||||  | |||    
T  34824 atgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaag 34725  T
Q  116 atcacaatcatcaatgaatgtgtggattcccttgt 150  Q
     || |  ||||||||||| ||||||||||||||||    
T  34724 ctccctgtcatcaatgaaggtgtggattcccttgt 34690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University