View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1158_low_10 (Length: 556)
Name: NF1158_low_10
Description: NF1158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1158_low_10 |
 |  |
|
| [»] scaffold0328 (3 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 26841769 - 26841695
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26841769 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaattcatggggggcctc |
26841695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 2639354 - 2639428
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
2639354 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcgctaaaacacatggggggcctc |
2639428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 18296594 - 18296668
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
18296594 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
18296668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 457
Target Start/End: Complemental strand, 2639003 - 2638933
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatgggggg |
457 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |
|
|
| T |
2639003 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaatacgtgggggg |
2638933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 7591722 - 7591796
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||||||| |
|
|
| T |
7591722 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaatacgtagggggcctc |
7591796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 18296257 - 18296184
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
18296257 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
18296184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 7591382 - 7591313
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggg |
456 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
7591382 |
cacatgtggcaaacattaaatgaagacacgccatcaaaatcagacacatcatcgctaaaacacatggggg |
7591313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 26842110 - 26842184
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
26842110 |
cacacgtggaaaacattaaatgaagacacgtcatcaaaatcatacacatcatcactaaaacacatggggggcctc |
26842184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 26841905 - 26841860
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26841905 |
aacaaaaaatatcgattaccggttccgttcatggtagagctgtcaa |
26841860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 18296394 - 18296349
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
18296394 |
aacaaaaaatatcgattactggttccgttcatggtagagctgtcaa |
18296349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 29230454 - 29230518
Alignment:
| Q |
396 |
caaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcct |
460 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||| ||||||| |
|
|
| T |
29230454 |
caaacattaaatgaagacacatcatcaaaatcagacatgtcatcactaaaatatatgaggggcct |
29230518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 29343753 - 29343817
Alignment:
| Q |
396 |
caaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcct |
460 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||| ||||||| |
|
|
| T |
29343753 |
caaacattaaatgaagacacatcatcaaaatcagacatgtcatcactaaaatatatgaggggcct |
29343817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 2639142 - 2639097
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||| |
|
|
| T |
2639142 |
aacaaaaaatatcgattaccggttctgttcatggcagagctgtcaa |
2639097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 7591583 - 7591628
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||| |
|
|
| T |
7591583 |
aacaaaaaatatcgattaccggttctgttcatggcagagctgtcaa |
7591628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 31641655 - 31641603
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatc |
439 |
Q |
| |
|
||||| || |||| |||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
31641655 |
cacatatgacaaaaattaaatgaatacacgtcatcaaaatcaaacagatcatc |
31641603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 9823233 - 9823307
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9823233 |
cacacgtggcaaacattaaatgaagacatgtcatcaaaatcagacacatcatcactaaaattcatggggggcctc |
9823307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 461
Target Start/End: Complemental strand, 13026812 - 13026743
Alignment:
| Q |
392 |
gtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
13026812 |
gtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
13026743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 13027154 - 13027227
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
13027154 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
13027227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 39723584 - 39723510
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
39723584 |
cacatatggcaaacattaaatgaagacacgtcatcaaaaacagacacatcatcactaaaacacatggggggcctc |
39723510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 22851572 - 22851498
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
22851572 |
cacacgtggcaaacattaaatgaacacacgtcatcaaaatcagacacatcatcactaaaacacatggagggcctc |
22851498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 39723920 - 39723994
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| |
|
|
| T |
39723920 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcaaacacatcatcactaaaacacatggagggcctc |
39723994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 9822924 - 9822856
Alignment:
| Q |
393 |
tggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||| |
|
|
| T |
9822924 |
tggcaaacattaaatgaagacacgtcatcaaaatcagacacatgatcactaaaacacatgggtggcctc |
9822856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 9823097 - 9823136
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagc |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9823097 |
aacaaaaaatatcgattaccggttccgttcatggtagagc |
9823136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 13027017 - 13027062
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
13027017 |
aacaaaaaatatcgattactggttccgttcatggtagagctgtcaa |
13027062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 22851883 - 22851927
Alignment:
| Q |
412 |
acacgtcatcaaaatcagacacatcatccctaaaattcatggggg |
456 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
22851883 |
acacgtcatcaaaatcagacacatcatcactaaaacacatggggg |
22851927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 22851767 - 22851800
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatgg |
285 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
22851767 |
aacaaaaaatatcgattaccggttcctttcatgg |
22851800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 36095998 - 36095924
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
36095998 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaatacatggggggcctc |
36095924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 36096347 - 36096421
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
36096347 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
36096421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 50679296 - 50679370
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
50679296 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
50679370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 50678960 - 50678887
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
50678960 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
50678887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 43051124 - 43051198
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
43051124 |
cacatatggtaaacattaaatgaagacacgtcatcaaaaacagacacatcatcactaaaacacatggggggcctc |
43051198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 45829175 - 45829116
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
45829175 |
cacacgtggcaaacattaaatgaagacatgtcatcaaaatcagacacatcatcactaaaa |
45829116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 45830070 - 45830129
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
45830070 |
cacacgtggcaaacattaaatgaagacatgtcatcaaaatcagacacatcatcactaaaa |
45830129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 43050789 - 43050715
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| |
|
|
| T |
43050789 |
cacacgtgacaaacattaaatgaagacacgtcatcaaaatcaaacacatcatcactaaaacacatggagggcctc |
43050715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 47219077 - 47219151
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||| ||||||| |
|
|
| T |
47219077 |
cacacgtggcaaacattaaatgaggacacgtcatcaaaatcaaacacatcatcactaaaacacatggagggcctc |
47219151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 11529346 - 11529291
Alignment:
| Q |
391 |
tgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |
|
|
| T |
11529346 |
tgtggcaaacattaaatgaagacacctaatcaaaatcagacacatcatcactaaaa |
11529291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 56505866 - 56505802
Alignment:
| Q |
396 |
caaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcct |
460 |
Q |
| |
|
|||| ||||||||||| ||| ||||||| ||||||||||||||| |||||| |||||||||||| |
|
|
| T |
56505866 |
caaaaattaaatgaaggcacatcatcaatatcagacacatcatcactaaaacacatggggggcct |
56505802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 43050984 - 43051023
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagc |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
43050984 |
aacaaaaaatatcgattaccggttccgttcatggcagagc |
43051023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 47218881 - 47218842
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagc |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
47218881 |
aacaaaaaatatcgattaccggttccgttcatggcagagc |
47218842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 50679096 - 50679051
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
50679096 |
aacaaaaaatatcgattattggttccgttcatggtagagctgtcaa |
50679051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 6002419 - 6002345
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6002419 |
cacacgtggcaaacattaaatgaaaacacgtcatcaaaatcagacacatcatcactaaaattcatggggggcctc |
6002345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 48190924 - 48190850
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48190924 |
cacaagtggcaaacattaaattaagacacgtcgtcaaaatcagacacatcatcactaaaattcatggggggcctc |
48190850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 48191257 - 48191331
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
48191257 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
48191331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 49284927 - 49285001
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
49284927 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
49285001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 49284590 - 49284517
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
49284590 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
49284517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 6002765 - 6002835
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatgggggg |
457 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
6002765 |
cacacgtggcaaacattaaatgaagacacatcatcaaaatcagacacatcatcactaaaacacatgggggg |
6002835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 48191061 - 48191016
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
48191061 |
aacaaaaaatatcgattaccggttccgtacatggtagagctgtcaa |
48191016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 49284727 - 49284682
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
49284727 |
aacaaaaaatatcgattactggttccgttcatggtagagctgtcaa |
49284682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 6002556 - 6002511
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
6002556 |
aacaaaaaatatcgattatcggtttagttcatggtagagcagtcaa |
6002511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 6667 - 6741
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
6667 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
6741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 6333 - 6264
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggg |
456 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
6333 |
cacatgtggcaaacattaaatgaagacaagtcatcaaaatcagacacatcatcactaaaacacatggggg |
6264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 6530 - 6575
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
6530 |
aacaaaaaatatcgattatcggttccgttcatggcagagctgtcaa |
6575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 13863495 - 13863421
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
13863495 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
13863421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 44599671 - 44599597
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
44599671 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
44599597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 44600008 - 44600081
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
44600008 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
44600081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 13863830 - 13863889
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
13863830 |
cacacgtggcaaacattaaatgaagacatgtcatcaaaatcagacacatcatcactaaaa |
13863889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 8643639 - 8643698
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| |||||||| |||||||||||||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
8643639 |
cacacgtggcaaaaattaaatgaagacatgtcatcaaaatcaaacacatcatcgctaaaa |
8643698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 44599871 - 44599916
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
44599871 |
aacaaaaaatatcgattactggttccgttcatggtagagctgtcaa |
44599916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 13863633 - 13863588
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
13863633 |
aacaaaaaatatcgattatcggttccgttcatggcagagctgtcaa |
13863588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 33829508 - 33829582
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
33829508 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaacacatggggggcctc |
33829582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 33829171 - 33829098
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
33829171 |
cacacgtggcaaatattaaatgaagacacgtcatcaaaatcagacacatcatcact-aaattcatggggggcctc |
33829098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 33829308 - 33829263
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
33829308 |
aacaaaaaatatcgattactggttccattcatggtagagctgtcaa |
33829263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 461
Target Start/End: Complemental strand, 18817134 - 18817060
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggggcctc |
461 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |
|
|
| T |
18817134 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcactaaaatacgtggggggcctc |
18817060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 18817483 - 18817553
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatgggggg |
457 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
18817483 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatcgctaaaacacatgggggg |
18817553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 11351301 - 11351370
Alignment:
| Q |
387 |
cacatgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaattcatggggg |
456 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
11351301 |
cacacgtggcaaacattaaatgaagacacgtcatcaaaatcagacacatcattactaaaacacatggggg |
11351370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 31570439 - 31570489
Alignment:
| Q |
396 |
caaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
31570439 |
caaaaattaaatgaagacatgtcatcaaaatcagacacatcatcactaaaa |
31570489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 11351106 - 11351061
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
11351106 |
aacaaaaaatatcgattaccggttccgttcatggcagagctgtcaa |
11351061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 18817271 - 18817226
Alignment:
| Q |
252 |
aacaaaaaatatcgattaccggttccgttcatggtagagcagtcaa |
297 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||| ||||| |
|
|
| T |
18817271 |
aacaaaaaatatcgattaccggttttgttcatggcagagctgtcaa |
18817226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 1928315 - 1928365
Alignment:
| Q |
396 |
caaacattaaatgaagacacgtcatcaaaatcagacacatcatccctaaaa |
446 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
1928315 |
caaaaattaaatgaagacacatcatcaaaatcagacacatcatcactaaaa |
1928365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 28702449 - 28702403
Alignment:
| Q |
393 |
tggcaaacattaaatgaagacacgtcatcaaaatcagacacatcatc |
439 |
Q |
| |
|
|||||| ||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
28702449 |
tggcaagcattaaatgaagacatgtcattaaaatcagacacatcatc |
28702403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University