View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1158_low_30 (Length: 397)

Name: NF1158_low_30
Description: NF1158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1158_low_30
NF1158_low_30
[»] chr3 (17 HSPs)
chr3 (302-392)||(55095221-55095311)
chr3 (152-235)||(40581108-40581191)
chr3 (152-239)||(53218071-53218158)
chr3 (152-240)||(34707744-34707832)
chr3 (156-240)||(29270328-29270412)
chr3 (162-241)||(10272088-10272167)
chr3 (157-239)||(7292649-7292730)
chr3 (152-240)||(22809224-22809313)
chr3 (171-252)||(23555439-23555520)
chr3 (162-242)||(584985-585065)
chr3 (160-240)||(10448741-10448821)
chr3 (154-241)||(2086724-2086811)
chr3 (165-238)||(4257345-4257418)
chr3 (152-240)||(21296733-21296821)
chr3 (153-241)||(36266210-36266298)
chr3 (212-244)||(43079840-43079872)
chr3 (152-188)||(52421172-52421208)
[»] chr7 (9 HSPs)
chr7 (152-241)||(30181516-30181605)
chr7 (152-240)||(38372525-38372613)
chr7 (152-245)||(34922893-34922986)
chr7 (152-242)||(29390581-29390671)
chr7 (152-240)||(40629448-40629535)
chr7 (160-242)||(22575551-22575633)
chr7 (164-240)||(22032729-22032805)
chr7 (171-244)||(35246635-35246708)
chr7 (152-216)||(28759871-28759935)
[»] chr4 (26 HSPs)
chr4 (152-249)||(43699514-43699611)
chr4 (152-240)||(23297405-23297493)
chr4 (152-240)||(29877606-29877694)
chr4 (152-244)||(35124350-35124442)
chr4 (152-246)||(18424308-18424402)
chr4 (152-242)||(3564185-3564275)
chr4 (160-242)||(9153622-9153703)
chr4 (159-240)||(42611905-42611987)
chr4 (160-242)||(52700583-52700664)
chr4 (152-188)||(488415-488451)
chr4 (160-240)||(43415328-43415408)
chr4 (152-220)||(46704301-46704368)
chr4 (152-239)||(1374394-1374481)
chr4 (152-203)||(7148776-7148827)
chr4 (198-241)||(12022987-12023030)
chr4 (152-203)||(28074369-28074420)
chr4 (195-241)||(1374291-1374337)
chr4 (194-244)||(22823759-22823809)
chr4 (194-244)||(34633362-34633412)
chr4 (152-242)||(38345853-38345942)
chr4 (152-249)||(948030-948127)
chr4 (152-217)||(27368183-27368248)
chr4 (194-239)||(35405653-35405698)
chr4 (152-220)||(8057119-8057187)
chr4 (157-209)||(12495682-12495734)
chr4 (166-242)||(15184512-15184588)
[»] chr1 (20 HSPs)
chr1 (154-238)||(35590099-35590183)
chr1 (152-240)||(10082217-10082305)
chr1 (152-240)||(10365138-10365226)
chr1 (156-243)||(18327488-18327575)
chr1 (152-242)||(4068080-4068170)
chr1 (152-244)||(391131-391224)
chr1 (152-244)||(1565413-1565503)
chr1 (152-240)||(1265724-1265812)
chr1 (165-249)||(15791342-15791426)
chr1 (165-249)||(32497315-32497399)
chr1 (152-240)||(37712035-37712122)
chr1 (177-244)||(37329318-37329385)
chr1 (210-243)||(7145207-7145240)
chr1 (152-244)||(26946135-26946228)
chr1 (152-241)||(35897654-35897743)
chr1 (152-188)||(6337787-6337823)
chr1 (152-188)||(15515378-15515414)
chr1 (160-244)||(19284859-19284943)
chr1 (172-240)||(26542940-26543008)
chr1 (177-249)||(46500901-46500973)
[»] chr2 (12 HSPs)
chr2 (152-244)||(38215986-38216074)
chr2 (152-250)||(33321434-33321532)
chr2 (152-247)||(4090449-4090544)
chr2 (153-240)||(2790102-2790190)
chr2 (160-240)||(11776951-11777031)
chr2 (152-220)||(33321343-33321411)
chr2 (165-240)||(2757114-2757188)
chr2 (162-240)||(735886-735964)
chr2 (152-229)||(4026904-4026980)
chr2 (152-240)||(5903500-5903588)
chr2 (152-209)||(25836743-25836800)
chr2 (212-244)||(9140650-9140682)
[»] chr8 (14 HSPs)
chr8 (117-239)||(32131408-32131530)
chr8 (160-243)||(26046995-26047078)
chr8 (160-242)||(2019688-2019770)
chr8 (160-240)||(14942391-14942471)
chr8 (165-249)||(42102065-42102149)
chr8 (158-242)||(13131395-13131479)
chr8 (165-249)||(42666956-42667040)
chr8 (152-203)||(28879062-28879113)
chr8 (152-242)||(19925419-19925509)
chr8 (152-205)||(35168472-35168526)
chr8 (165-243)||(38195451-38195529)
chr8 (194-243)||(13451492-13451541)
chr8 (212-244)||(11460796-11460828)
chr8 (152-188)||(34286594-34286630)
[»] chr6 (10 HSPs)
chr6 (166-253)||(32615459-32615546)
chr6 (152-240)||(25430797-25430882)
chr6 (153-254)||(9894720-9894820)
chr6 (152-244)||(7267738-7267830)
chr6 (171-227)||(17300788-17300844)
chr6 (154-242)||(715958-716046)
chr6 (152-240)||(3211032-3211120)
chr6 (160-240)||(6632626-6632706)
chr6 (152-240)||(21871315-21871402)
chr6 (152-240)||(24625818-24625906)
[»] chr5 (27 HSPs)
chr5 (152-229)||(22201967-22202044)
chr5 (156-220)||(10537254-10537318)
chr5 (152-244)||(11163300-11163392)
chr5 (152-240)||(12987045-12987133)
chr5 (152-240)||(13060633-13060721)
chr5 (156-244)||(42851985-42852073)
chr5 (160-239)||(11991273-11991352)
chr5 (165-244)||(15122508-15122587)
chr5 (152-235)||(17128250-17128333)
chr5 (165-251)||(33757044-33757130)
chr5 (152-240)||(15413959-15414047)
chr5 (156-208)||(1473355-1473407)
chr5 (152-240)||(24030182-24030270)
chr5 (152-228)||(29922220-29922296)
chr5 (165-244)||(15709935-15710014)
chr5 (152-203)||(43268652-43268703)
chr5 (194-244)||(1868971-1869021)
chr5 (165-243)||(2531290-2531368)
chr5 (194-240)||(9251832-9251878)
chr5 (152-202)||(12467269-12467319)
chr5 (194-240)||(41125671-41125717)
chr5 (152-202)||(41534628-41534678)
chr5 (152-225)||(2670057-2670130)
chr5 (195-240)||(28970152-28970197)
chr5 (171-244)||(33667442-33667515)
chr5 (160-240)||(1372032-1372112)
chr5 (152-240)||(3520534-3520621)
[»] scaffold0012 (1 HSPs)
scaffold0012 (165-242)||(178465-178542)
[»] scaffold0024 (1 HSPs)
scaffold0024 (152-229)||(97237-97314)
[»] scaffold0015 (1 HSPs)
scaffold0015 (213-242)||(48849-48878)
[»] scaffold1088 (1 HSPs)
scaffold1088 (194-234)||(1267-1307)
[»] scaffold0157 (1 HSPs)
scaffold0157 (157-209)||(24743-24795)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 5e-44; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 55095221 - 55095311
Alignment:
Q  302 cactactcctgactctgatcacatctactatcaggtaattaacctttctctttttattattatgtaatgtctaattaatgtgtgtgttagt 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55095221 cactactcctgactctgatcacatctactatcaggtaattaacctttctctttttattattatgtaatgtctaattaatgtgtgtgttagt 55095311  T

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Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 40581108 - 40581191
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatc 235  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||  ||||||||| || |||||||||||    
T  40581108 ctaccttgacaagcttattaataatacataaaagcttatttatttgcataagttgttttgcataagctcaaagataagtcaatc 40581191  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 53218071 - 53218158
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaa 239  Q
    |||||||||||||||||| |||||||||||| | ||| ||  || |||||||||||||  ||||||||  ||||||||||||||||||    
T  53218071 ctaccttgacaagcttatgaataatacataaaatcttatttattcgcataagttgttttgcataagctaaaaaataagtcaatccaaa 53218158  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 34707744 - 34707832
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||| |||||||||| |||||||||||| ||||| |   ||| | ||||||||||  ||||||||| |||||||||||||||||||    
T  34707744 ctaccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaaaaataagtcaatccaaac 34707832  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 29270412 - 29270328
Alignment:
Q  156 cttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||| |||||||| |||||||||||| ||||| ||  ||   |||||||||||  ||||||||| |||||||||||||||||||    
T  29270412 cttgaaaagcttatgaataatacataaaagcttatttattcctataagttgttttgcataagctcaaaaataagtcaatccaaac 29270328  T

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Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 10272167 - 10272088
Alignment:
Q  162 aagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    |||||||| |||||||||||| || || ||  ||||||| ||||||||  ||||||||  ||||||||||||||||||||    
T  10272167 aagcttatgaataatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaaataagtcaatccaaacg 10272088  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 7292730 - 7292649
Alignment:
Q  157 ttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaa 239  Q
    ||||||| ||||| |||||||||||| ||||| |   ||||||||||||| || ||||||| || ||||||||||||||||||    
T  7292730 ttgacaaacttatgaataatacataagagcttatgtatttgcataagttgctttacataagttc-aaaataagtcaatccaaa 7292649  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 22809224 - 22809313
Alignment:
Q  152 ctaccttgacaagcttattaataatacat-aatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| ||||||| || || ||||| ||  |||||||||| |||||  ||||| ||| ||||||||||||| |||||    
T  22809224 ctaccttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagtcaattcaaac 22809313  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 23555520 - 23555439
Alignment:
Q  171 aataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaaata 252  Q
    |||||||||||| ||||| ||  |||||||||  ||||||  |||||||| |||||||| |||||||||||| | |||||||    
T  23555520 aataatacataaaagcttatttatttgcataaactgtttcgtataagctcaaaaataagccaatccaaacggaccctaaata 23555439  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 585065 - 584985
Alignment:
Q  162 aagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||| | |||||| ||||| ||||| ||  |||||||||  ||||| |||||||||  |||||||||||||||||||||    
T  585065 aagcttttgaataatgcataaaagcttatttatttgcataatgtgttttacataagctgaaaaataagtcaatccaaacgg 584985  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 10448821 - 10448741
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||| ||||||||||||  || | ||  ||||||||||||||||  ||||||||| ||||||||  |||||||||    
T  10448821 acaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctctaaaataagctaatccaaac 10448741  T

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Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 2086724 - 2086811
Alignment:
Q  154 accttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    ||||| ||||| |||| |||||||||||| || || ||  ||| |||||| |||||  ||||||||| |||||||| |||||||||||    
T  2086724 acctttacaagattataaataatacataaaagtttatttatttacataagctgtttagcataagctctaaaataagccaatccaaacg 2086811  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 4257345 - 4257418
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaa 238  Q
    ||||| |||||||||||| | ||| ||  |||||||||||||||| | |||||||| ||||||||  |||||||    
T  4257345 cttataaataatacataaaaacttatttatttgcataagttgttttatataagctctaaaataagctaatccaa 4257418  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 21296821 - 21296733
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||| || | ||| ||||||| |||| | ||| ||  ||||||||| ||||||  ||||| ||| |||||||||||||||||||    
T  21296821 ctaccttgataaacgtatgaataatagataaaaacttatttatttgcataaattgttttgcataatctcaaaaataagtcaatccaaac 21296733  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 36266298 - 36266210
Alignment:
Q  153 taccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    |||||| |||| ||||| |||||||||||| || || ||  |||||||||  ||||| | |||||||| ||||||||  ||||||||||    
T  36266298 taccttaacaaacttataaataatacataaaagtttatttatttgcataaactgttttatataagctctaaaataagctaatccaaacg 36266210  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 43079872 - 43079840
Alignment:
Q  212 cataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||| ||||||||||||||||||||||    
T  43079872 cataagctcgtaaataagtcaatccaaacgggc 43079840  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 52421172 - 52421208
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt 188  Q
    |||||||||||||||||| |||||||||||| |||||    
T  52421172 ctaccttgacaagcttatgaataatacataaaagctt 52421208  T

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Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 30181605 - 30181516
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    |||||||||||||||||| |||||||||||| ||||| ||  ||||| |||||||| |  ||||||||| ||||||||||||||||||||    
T  30181605 ctaccttgacaagcttatgaataatacataaaagcttctttatttgcctaagttgtattgcataagctcaaaaataagtcaatccaaacg 30181516  T

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Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 38372613 - 38372525
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||| ||||| |||||||||||| ||||| ||  |||||||||| |||||  ||||||||| |||||||||||||||||||    
T  38372613 ctaccttgacaaacttatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaac 38372525  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 34922986 - 34922893
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggct 245  Q
    |||||||||||| ||||| |||||||||||| ||||| ||  ||||||||||||||||  | | ||||  |||||||| |||||||||||||||    
T  34922986 ctaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgttttgcgttagctgaaaaataagccaatccaaacgggct 34922893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 29390581 - 29390671
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    ||||||| |||||||||| |||||||||| | || || ||  ||||||||||||||||  ||||| ||| |||||||| ||||||||||||    
T  29390581 ctacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataaactcaaaaataagccaatccaaacgg 29390671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 40629448 - 40629535
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| |||||||||||| || || ||  |||| ||||| |||||  ||||||||| |||||||| ||||||||||    
T  40629448 ctaccttgacaagcttatgaataatacataa-agtttatttatttggataagctgttttgcataagctcaaaaataagccaatccaaac 40629535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 22575633 - 22575551
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||| ||||| |||||||||||| | | | ||  |||||||||| ||||| |||||||||| ||||||||| |||||||||||    
T  22575633 acaaacttataaataatacataaaaacgtatttatttgcataagatgttttacataagctctaaaataagttaatccaaacgg 22575551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 22032805 - 22032729
Alignment:
Q  164 gcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||| |||||||||||| | | | ||  |||||||||||||||| |||||||||| ||||||||  |||||||||    
T  22032805 gcttataaataatacataaaaacatatttatttgcataagttgttttacataagctctaaaataagctaatccaaac 22032729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 35246708 - 35246635
Alignment:
Q  171 aataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||| | ||| ||  |||||||||||||||| | ||| |||| ||||||||  |||||||||||||    
T  35246708 aataatacataaaaacttatttatttgcataagttgttttatataggctctaaaataagctaatccaaacgggc 35246635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 28759871 - 28759935
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataa 216  Q
    ||||||| |||||||||| ||||||| |||| | ||| || |||| |||||||||||| ||||||    
T  28759871 ctaccttaacaagcttatgaataataaataaaaactttttttttttcataagttgttttacataa 28759935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 43699514 - 43699611
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    |||| ||||||||||||| ||||| |||||| ||||| ||  |||| |||||||||||  ||||||||| |||||||| |||||||||||||| ||||    
T  43699514 ctacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagccaatccaaacgggcactaa 43699611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 23297493 - 23297405
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||| ||||| |||||||||||| ||||| ||  |||||||||| | |||  ||||||||| |||||||| ||||||||||    
T  23297493 ctaccttgacaaacttatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaaaaataagccaatccaaac 23297405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 29877694 - 29877606
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||  ||||||||| |||||||||||| ||||| ||  ||||||||| ||||||  ||||||||| |||||||| ||||||||||    
T  29877694 ctaccttagcaagcttatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagccaatccaaac 29877606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 35124442 - 35124350
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||||||||| |||| ||||||| || || |   |||||||||| |||||  ||||||||| |||||||||||||||||| ||||    
T  35124442 ctaccttgacaagcttatgaatagtacataaaaggttatatatttgcataagctgttttgcataagctcaaaaataagtcaatccaaatgggc 35124350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 18424308 - 18424402
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctc 246  Q
    ||||||| ||||| |||| |||||||||||| ||||| ||  |||| |||| ||||||  ||||||||| |||||| |||||| |||||||||||    
T  18424308 ctaccttcacaagtttatgaataatacataaaagcttatttatttgtataaattgttttgcataagctcaaaaatatgtcaattcaaacgggctc 18424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 3564275 - 3564185
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||||||||| ||||| ||||||| |||| || || ||  ||| |||||| |||||  ||||||||| |||| ||||||||||||||||    
T  3564275 ctaccttgacaaacttatgaataatatataaaagtttatttattttcataagctgttttgcataagctcaaaaacaagtcaatccaaacgg 3564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 9153622 - 9153703
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||||||| ||||||||||||||  |  ||  ||| ||||||||||||  ||||||||| |||||||||||||||||||||    
T  9153622 acaagcttat-aataatacataatacataattgatttacataagttgttttgcataagctctaaaataagtcaatccaaacgg 9153703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 42611905 - 42611987
Alignment:
Q  159 gacaagcttattaataatacata-atagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||| ||||||||||| | ||||| ||  ||||||||||||||||  ||||||||  |||||||| ||||||||||    
T  42611905 gacaagcttatgaataatacatataaagcttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaac 42611987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 52700583 - 52700664
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||||||| ||||||||||||   ||| ||  ||| ||||||||||||  ||||||||| |||||||||||||||||||||    
T  52700583 acaagcttataaataatacataaagacttatttatttacataagttgtttg-cataagctctaaaataagtcaatccaaacgg 52700664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 488415 - 488451
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt 188  Q
    ||||||||||||||||||||||||||||||| |||||    
T  488415 ctaccttgacaagcttattaataatacataaaagctt 488451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 43415328 - 43415408
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| ||||| |||||||||||| | ||| ||  |||||| ||||||||| || ||||||| ||||||||||||| |||||    
T  43415328 acaaccttatgaataatacataaaaacttatttatttgcagaagttgttttacttaagctcaaaaataagtcaattcaaac 43415408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 46704301 - 46704368
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctc 220  Q
    ||||||| ||||||| || ||||||| |||| ||||| |||||| ||||||||||||| ||||||||||    
T  46704301 ctaccttaacaagctcatgaataataaataaaagcttattattt-gcataagttgttttacataagctc 46704368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 1374394 - 1374481
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaa 239  Q
    ||||| |||||||||||| ||| || ||||| | ||| ||  |||||||||||| |||  ||||||||| |||||||| |||||||||    
T  1374394 ctaccatgacaagcttatgaatcatgcataaaaacttttttatttgcataagtttttttgcataagctcaaaaataagccaatccaaa 1374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 7148827 - 7148776
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataag 203  Q
    |||||||||||||||||| |||||||||||| ||||| ||  ||||||||||    
T  7148827 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 7148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 12023030 - 12022987
Alignment:
Q  198 cataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||    
T  12023030 cataagttgttttgcataagctctaaaataagtcaatccaaacg 12022987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 28074420 - 28074369
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataag 203  Q
    |||||||||||||||||| |||||||||||| ||||| ||  ||||||||||    
T  28074420 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 1374337 - 1374291
Alignment:
Q  195 ttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    ||||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  1374337 ttgcataagttatttctcataagctcaaaaataattcaatccaaacg 1374291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 22823809 - 22823759
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||||||| | |||||||| ||||||||  |||||||||||||    
T  22823809 tttgcataagttgttttatataagctctaaaataagctaatccaaacgggc 22823759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 34633412 - 34633362
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||||||||||||||  ||||||||  |||||||| ||||||||||||||    
T  34633412 tttgcataagttgttttgcataagctaaaaaataagccaatccaaacgggc 34633362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 38345853 - 38345942
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||| ||||||| ||||| |||| ||||||| ||||| ||  |||| ||||| |||||  ||||||||| || ||||||||||||||||||    
T  38345853 ctactttgacaa-cttatgaatactacataaaagcttatttatttggataagctgttttgcataagctcaaacataagtcaatccaaacgg 38345942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 948127 - 948030
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    ||||||||||||  |||| |||||||||||| ||||| ||  ||| |||||| | |||  ||||||||  ||| ||||||| ||||||||||| ||||    
T  948127 ctaccttgacaaagttatgaataatacataaaagcttatttattttcataagctattttgcataagctaaaaagtaagtcattccaaacgggccctaa 948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 27368183 - 27368248
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataag 217  Q
    |||| ||||||| ||||| ||||||| |||| ||||| ||  |||||||||||||||| |||||||    
T  27368183 ctacattgacaaacttatgaataatatataaaagcttatttatttgcataagttgttttacataag 27368248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 35405698 - 35405653
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaa 239  Q
    |||| |||||||||||  ||||||||| ||||||||||||||||||    
T  35405698 tttgtataagttgttttgcataagctcaaaaataagtcaatccaaa 35405653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 8057119 - 8057187
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctc 220  Q
    |||||||||||||||||| ||||||| |||| | ||| || |||||||| |||| |||  |||||||||    
T  8057119 ctaccttgacaagcttatgaataataaataaaaacttatttttttgcattagttatttttcataagctc 8057187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 12495682 - 12495734
Alignment:
Q  157 ttgacaagcttattaataatacataatagcttgttattttgcataagttgttt 209  Q
    ||||||||||||| |||||||||||| ||||| ||  |||||||||| |||||    
T  12495682 ttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttt 12495734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 15184588 - 15184512
Alignment:
Q  166 ttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||| |||||||||||| | ||| ||  ||| |||||| ||||| | |||||||| ||||||||| |||||||||||    
T  15184588 ttataaataatacataaaaacttatttatttacataagctgttttatataagctctaaaataagttaatccaaacgg 15184512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 35590183 - 35590099
Alignment:
Q  154 accttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaa 238  Q
    |||||||||||||||| ||  |||||||| ||||| ||  |||||||||||||||| |||||||||  |||||||||||||||||    
T  35590183 accttgacaagcttatgaactatacataaaagcttatttatttgcataagttgttttacataagctaaaaaataagtcaatccaa 35590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 10082305 - 10082217
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||| ||||| ||||| |||||| | ||| ||  |||||||||||||||||||| || ||| |||||||||| || |||||    
T  10082305 ctaccttgacaaacttatcaataacacataaaaacttatttatttgcataagttgtttcacaaaaactcaaaaataagtccattcaaac 10082217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 10365226 - 10365138
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| |||||||||||||||||||||||||| || || ||  ||||||||| || ||| |||||||||  ||||| || ||||||||||    
T  10365226 ctactttgacaagcttattaataatacataaaagtttattcatttgcataaattattttacataagctgaaaaattaggcaatccaaac 10365138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 18327575 - 18327488
Alignment:
Q  156 cttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacggg 243  Q
    |||||||||||||| | |||||||||| ||||| ||  |||||||||| |||||   ||||  || ||||||||||||||||||||||    
T  18327575 cttgacaagcttatgagtaatacataaaagcttatttatttgcataagctgttttgaataaattccaaaataagtcaatccaaacggg 18327488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 4068170 - 4068080
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||||||||||||||| |||||||||||| ||||| ||  |||||| ||| | |||  || |||||  |||||||| ||||||||||||    
T  4068170 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcacaagctattttgcaaaagctaaaaaataagccaatccaaacgg 4068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 391224 - 391131
Alignment:
Q  152 ctaccttgacaagcttattaataatacataata-gcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||| ||||||||||||| ||||||| |||| | |||| ||  |||||||||| |||||  ||||| ||| |||||||| ||||||||||||||    
T  391224 ctacattgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagccaatccaaacgggc 391131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 1565413 - 1565503
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||||||||  |||||| ||||| ||||||||  ||| |||||| |||||  |||||||||  || |||||||||||||| ||||    
T  1565413 ctaccttgacaagcttacgaataatgcataaaagcttgtttatttacataagctgttt--cataagctcagaagtaagtcaatccaaatgggc 1565503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 1265724 - 1265812
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||||  |||| |||||||||||| | ||| |   |||| |||||||||||  ||||||||| ||||||||||||| |||||    
T  1265724 ctaccttgacaaaattatgaataatacataaaatcttatctgtttgtataagttgttttgcataagctcaaaaataagtcaattcaaac 1265812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 15791426 - 15791342
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    ||||| |||||||||||| | ||| ||  ||| |||||| ||||| | |||||||| ||||||||| ||||||||||||| ||||    
T  15791426 cttataaataatacataaaaacttatttatttacataagctgttttatataagctctaaaataagttaatccaaacgggccctaa 15791342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 32497315 - 32497399
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    ||||| |||||||||||| | ||| ||  |||||||||| ||||| | |||||||| ||||||||  |||||||| |||||||||    
T  32497315 cttataaataatacataaaaacttatttatttgcataagctgttttatataagctccaaaataagctaatccaaatgggctctaa 32497399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 37712122 - 37712035
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| |||| ||||||| ||||| ||  |||||||||  |||||  ||| ||||| ||||||| |||||||||||    
T  37712122 ctaccttgacaagcttatgaata-tacataaaagcttattcatttgcataaactgtttttcattagctcaaaaataaatcaatccaaac 37712035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 37329385 - 37329318
Alignment:
Q  177 acataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||| ||||| ||  |||||||||||| |||  ||||||||| |||||||||| ||||||||||||    
T  37329385 acataaaagcttatttatttgcataagttatttttcataagctcaaaaataagtcgatccaaacgggc 37329318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 7145240 - 7145207
Alignment:
Q  210 cacataagctcgaaaataagtcaatccaaacggg 243  Q
    ||||||||||| ||||||||||||||||||||||    
T  7145240 cacataagctcaaaaataagtcaatccaaacggg 7145207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 26946135 - 26946228
Alignment:
Q  152 ctaccttgacaagcttattaataatacataata-gcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||||| |||||||||| ||||| |||||| | |||| ||  ||| ||||||  ||||  ||||||||| |||||||||||||||||| ||||    
T  26946135 ctaccttaacaagcttatgaataacacataaaaagcttatttatttacataagccgttttgcataagctcaaaaataagtcaatccaaatgggc 26946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 35897654 - 35897743
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacg 241  Q
    |||| |||| |||||||| ||||||| |||| | ||| ||  ||||||||||||||||  ||||| ||  ||||||| ||||||||||||    
T  35897654 ctactttgaaaagcttatgaataataaataaaaacttatttatttgcataagttgttttgcataaccttaaaaataaatcaatccaaacg 35897743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 6337787 - 6337823
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt 188  Q
    |||||||||||||||||| |||||||||||| |||||    
T  6337787 ctaccttgacaagcttatgaataatacataaaagctt 6337823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 15515378 - 15515414
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt 188  Q
    |||||||||||||||||| |||||||||||| |||||    
T  15515378 ctaccttgacaagcttatgaataatacataaaagctt 15515414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 19284943 - 19284859
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||| ||||| |||||||||||||||||| ||  |||  ||||| ||||| | |||||||| ||| ||||| ||| |||||||||    
T  19284943 acaaacttataaataatacataatagcttatttatttatataagctgttttatataagctctaaagtaagttaattcaaacgggc 19284859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 26543008 - 26542940
Alignment:
Q  172 ataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||| ||| | ||  |||||||||||||||| | || |||||  ||||||||||||||||||    
T  26543008 ataatacataaaagcatatttatttgcataagttgttttatatcagctctcaaataagtcaatccaaac 26542940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 46500973 - 46500901
Alignment:
Q  177 acataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    |||||| ||||| ||  |||||||||||| |||   ||||| |  ||||||||||||||||||||||||||||    
T  46500973 acataaaagcttatttatttgcataagttattttttataagataaaaaataagtcaatccaaacgggctctaa 46500901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 38216074 - 38215986
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||||||||| |||||||||||||    | ||  |||||||||| |||||  ||||||||| |||||||||||||||||||||||    
T  38216074 ctaccttgacaagcttatgaataatacataat----tatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaacgggc 38215986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 33321434 - 33321532
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaaa 250  Q
    |||||||||||||||||| | |||||||||| | |||  |  ||||||||||||||||  ||||||||  |||||||||||||| |||| ||| |||||    
T  33321434 ctaccttgacaagcttatgagtaatacataaaaacttaattatttgcataagttgttttgcataagctaaaaaataagtcaatcgaaacaggccctaaa 33321532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 4090544 - 4090449
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctct 247  Q
    ||||||||||||| |||| |||||||||| | || || ||  |||||||||| |||||  ||||||||| |||||||| |||| || |||||||||    
T  4090544 ctaccttgacaagattatgaataatacatcaaagtttatttatttgcataagctgttttgcataagctcaaaaataagccaattcagacgggctct 4090449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 2790102 - 2790190
Alignment:
Q  153 taccttgacaagcttattaataatacataatagc-ttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||||||||| |||||| ||||| ||| || ||  |||||||||| |||||  ||||||||| |||||||| ||| ||||||    
T  2790102 taccttgacaagcttatcaataatgcataaaagctttatttatttgcataagctgttttgcataagctcaaaaataagccaacccaaac 2790190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 11777031 - 11776951
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||| |||||||||||| ||||| ||  | |||||||| ||||| ||||  |||  |||||||||||||||||||    
T  11777031 acaagcttataaataatacataaaagcttatttatatgcataagctgttttacatgcgctttaaaataagtcaatccaaac 11776951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 33321343 - 33321411
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctc 220  Q
    |||||||||||||||||| ||||| |||||| ||||| ||  |||||| |||||||||  |||||||||    
T  33321343 ctaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataagctc 33321411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 2757114 - 2757188
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||| |||||||||||| | ||| ||  |||||||||| ||||| | |||||||| |||||||||||||||||||    
T  2757114 cttataaataatacataaaa-cttatttatttgcataagctgttttatataagctctaaaataagtcaatccaaac 2757188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 735964 - 735886
Alignment:
Q  162 aagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||| |||||||||||| ||||| ||  ||| || ||||| |||  ||||||||| ||| |||||||||||||||    
T  735964 aagcttataaataatacataaaagcttatttgtttacacaagttattttgcataagctctaaattaagtcaatccaaac 735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 4026980 - 4026904
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataag 229  Q
    |||||||||||||||||| | |||||||||| ||||| ||  ||||||||||  ||||  ||||||||| ||||||||    
T  4026980 ctaccttgacaagcttatga-taatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataag 4026904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 5903588 - 5903500
Alignment:
Q  152 ctaccttgacaagcttattaataataca-taatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| ||||||||||||| | ||||||| |||| |||||||  ||||||||||||||||  ||| ||||| |||||||||| || |||||    
T  5903588 ctactttgacaagcttatgagtaatacactaat-gcttgtttatttgcataagttgttttgcattagctcaaaaataagtcgattcaaac 5903500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 25836743 - 25836800
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgttt 209  Q
    |||||||||||||||||| |||||||||||| ||| | ||  |||||||||| |||||    
T  25836743 ctaccttgacaagcttatgaataatacataaaagcatatttatttgcataagctgttt 25836800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 9140682 - 9140650
Alignment:
Q  212 cataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||||||| |||||||||||||||||||||||    
T  9140682 cataagctcaaaaataagtcaatccaaacgggc 9140650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 32131530 - 32131408
Alignment:
Q  117 gaaaattgtatcttcataggatgnnnnnnnagaacctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataa 216  Q
    |||||||||||||||||||| ||       | || |||||||||||| ||||  |||||| ||||| ||||| ||  |||||||||| |||||  |||||    
T  32131530 gaaaattgtatcttcataggttgtttattcataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgcataa 32131431  T
Q  217 gctcgaaaataagtcaatccaaa 239  Q
    |||| ||||||||||||||||||    
T  32131430 gctcaaaaataagtcaatccaaa 32131408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 26046995 - 26047078
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataag-tcaatccaaacggg 243  Q
    |||||||| ||||||||| |||| |||||  | ||||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  26046995 acaagcttgttaataataaataaaagcttacttttttgcataagttgttttacataagctc-aaaataagctcaatccaaacggg 26047078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 2019688 - 2019770
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||||| | |||||||||||||  ||| ||  |||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  2019688 acaagcttgtaaataatacataatgacttatttatttgcataagatgttttgcataagctctaaaataagtcaatccaaacgg 2019770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 14942471 - 14942391
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||| ||||||||| || ||||| ||  | | |||||||||||| |||||||||| |||||||| ||||||||||    
T  14942471 acaagcttataaataatacacaaaagcttatttatatacataagttgttttacataagctctaaaataagccaatccaaac 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 42102149 - 42102065
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    ||||| |||||||||||| | ||| ||  |||||||||| ||||| | |||||||| ||||||||| ||||||||||||| ||||    
T  42102149 cttataaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagttaatccaaacgggccctaa 42102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 13131479 - 13131395
Alignment:
Q  158 tgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    |||||| ||||| |||||||||||| ||||| ||  ||||||||| ||||||  ||||||||  ||||||||  |||||||||||    
T  13131479 tgacaaacttatgaataatacataaaagcttatttatttgcataatttgttttgcataagctaaaaaataagcaaatccaaacgg 13131395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 42667040 - 42666956
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaa 249  Q
    ||||| |||||||||||| | ||||||  |||||||||||||||| | |||||  | ||||||||  ||||||||||||| ||||    
T  42667040 cttataaataatacataacaacttgtttatttgcataagttgttttatataagtcctaaaataagataatccaaacgggccctaa 42666956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 28879113 - 28879062
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataag 203  Q
    |||||||||||||||||| |||||||||||| ||||| ||  ||||||||||    
T  28879113 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 19925419 - 19925509
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    ||||||| ||||| |||| |||||||||| |  |||| ||  |||||||||  ||||   ||||||||| |||||||||||||||||||||    
T  19925419 ctaccttaacaagtttataaataatacattaatgcttatttatttgcataaactgttatgcataagctctaaaataagtcaatccaaacgg 19925509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 35168472 - 35168526
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt-gttattttgcataagtt 205  Q
    |||||||||||||||||| |||||||||||| |||||  || |||||||||||||    
T  35168472 ctaccttgacaagcttatgaataatacataaaagcttatttgttttgcataagtt 35168526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 38195529 - 38195451
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacggg 243  Q
    ||||| ||||||| |||| | ||| ||  |||||||||||||||| | |||||||| ||||||||  ||||||||||||    
T  38195529 cttataaataatatataaaaacttatttatttgcataagttgttttatataagctctaaaataagctaatccaaacggg 38195451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 13451541 - 13451492
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaacggg 243  Q
    |||||||||||||||| |||||| ||| |||| |||||||| ||||||||    
T  13451541 tttgcataagttgtttgacataaactcaaaaacaagtcaattcaaacggg 13451492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 11460796 - 11460828
Alignment:
Q  212 cataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||||||| |||||||||||||||||||||||    
T  11460796 cataagctcaaaaataagtcaatccaaacgggc 11460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 34286594 - 34286630
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagctt 188  Q
    |||||||||||||||||| |||||||||||| |||||    
T  34286594 ctaccttgacaagcttatgaataatacataaaagctt 34286630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 32615459 - 32615546
Alignment:
Q  166 ttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaaatat 253  Q
    |||| |||||||||||| | ||| ||  |||||||||| ||||| | |||||||  ||||||||| ||||||||||||||||||||||    
T  32615459 ttataaataatacataaaaacttatttatttgcataagctgttttatataagctataaaataagttaatccaaacgggctctaaatat 32615546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 25430797 - 25430882
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| ||||   |||||  |||| ||  |||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  25430797 ctaccttgacaagcttatgaata---cataaatgcttatttatttgtataagctgttttacataagctcaaaaataagtcaatccaaac 25430882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 9894820 - 9894720
Alignment:
Q  153 taccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaaata 252  Q
    |||||| |||| ||||| |||||||||||| || || ||  ||||| |||| |||||   |||||||||||||||||  ||||||||||||| |||||||    
T  9894820 taccttaacaaacttataaataatacataaaagattatttatttgcgtaagctgttttgtataagctcgaaaataagctaatccaaacgggc-ctaaata 9894722  T
Q  253 ta 254  Q
    ||    
T  9894721 ta 9894720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 7267830 - 7267738
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||| ||||||||| |||||||||||| ||||| ||  ||||||||||  |||| || ||||||  |||| ||| ||||||||| ||||    
T  7267830 ctaccttggcaagcttatgaataatacataaaagcttatttgtttgcataagccgttttacttaagctaaaaaacaagccaatccaaatgggc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 17300788 - 17300844
Alignment:
Q  171 aataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaata 227  Q
    |||||||||||| | ||| ||  |||||||||||||||||| |||||||||||||||    
T  17300788 aataatacataaaaacttatttatttgcataagttgtttcaaataagctcgaaaata 17300844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 715958 - 716046
Alignment:
Q  154 accttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    ||||| ||||| |||| |||||||||||  | ||| ||  ||| ||||||||| ||  ||||||||  |||||||||||||||||||||    
T  715958 acctttacaagtttataaataatacatagaaacttatttatttacataagttgatttgcataagctttaaaataagtcaatccaaacgg 716046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 3211032 - 3211120
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| ||||||||||||| | |||||||||| ||||| ||  |||||||||| |||||  || |||||  |||||||| | ||||||||    
T  3211032 ctacattgacaagcttatcagtaatacataaaagcttatttatttgcataagctgttttgcacaagctaaaaaataagccgatccaaac 3211120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 6632706 - 6632626
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||| |||| |||||||||||| ||| | ||  ||||||||||||||||   |||||||| ||||||||  |||||||||    
T  6632706 acaagtttataaataatacataaaagcatatttatttgcataagttgttttgaataagctctaaaataagctaatccaaac 6632626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 21871315 - 21871402
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||||| |||| |||||||||||| || ||  |  |||||||||||||||| |||||| ||  |||||||  ||||||||||    
T  21871315 ctaccttgacaag-ttatcaataatacataaaagtttacttatttgcataagttgttttacataaactaaaaaataaaccaatccaaac 21871402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 24625906 - 24625818
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||| |||||||||| |||||||||||| ||| | ||  |||||||| ||||| |  | ||| ||| |||||||| ||||||||||    
T  24625906 ctaccttaacaagcttatgaataatacataaaagcgtatttatttgcatatgttgtcttgcctaacctcaaaaataagacaatccaaac 24625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 22201967 - 22202044
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataag 229  Q
    |||||||||||||||||| |||||||||||| ||||| ||  ||| |||||| |||||  ||||||||| ||||||||    
T  22201967 ctaccttgacaagcttatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaaaaataag 22202044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 10537254 - 10537318
Alignment:
Q  156 cttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctc 220  Q
    |||||||||||||| |||||||||||| ||||| ||  |||||||||| ||||| ||||||||||    
T  10537254 cttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataagctc 10537318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 11163300 - 11163392
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||| ||||||||||| ||| |||||||| | ||| ||  ||| |||||| |||||  ||||||||  |||||||||||||||||||||||    
T  11163300 ctacctcgacaagcttatgaatcatacataaaaacttattgatttacataagctgttttgcataagctaaaaaataagtcaatccaaacgggc 11163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 12987045 - 12987133
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| || ||||||||| ||||| ||  |||||||||||| ||| ||||||  ||  ||||||| ||||||||||    
T  12987045 ctaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaac 12987133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 13060633 - 13060721
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| || ||||||||| ||||| ||  |||||||||||| ||| ||||||  ||  ||||||| ||||||||||    
T  13060633 ctaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaac 13060721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 42852073 - 42851985
Alignment:
Q  156 cttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||||| |||||||||||| ||||| ||  |||| ||||| |||||  ||||||| | |||||||| |||||| |||||||    
T  42852073 cttgacaagcttatgaataatacataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagccaatccgaacgggc 42851985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 11991352 - 11991273
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaa 239  Q
    |||||||||| |||||||||||| ||||| ||  ||| ||||||||||||  |||||||   ||||||||||||||||||    
T  11991352 acaagcttataaataatacataaaagcttatttatttacataagttgttttgcataagcattaaaataagtcaatccaaa 11991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 15122587 - 15122508
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||| |||||||||||| | ||| ||  |||||||||||||||| | |||||||| ||||||||  |||||||||||||    
T  15122587 cttataaataatacataaaaacttatttctttgcataagttgttttatataagctctaaaataagctaatccaaacgggc 15122508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 17128333 - 17128250
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatc 235  Q
    |||| |||| ||| |||| |||||||||||| ||||| ||  |||||||||| |||||  ||||||||| ||||||||||||||    
T  17128333 ctactttgataagtttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatc 17128250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 33757130 - 33757044
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggctctaaat 251  Q
    ||||| |||||||||||| | ||| ||  |||||||||| ||||| | |||||||| ||||||||  |||||||||| |||||||||    
T  33757130 cttataaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaacgagctctaaat 33757044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 15414047 - 15413959
Alignment:
Q  152 ctaccttgacaagcttattaataatacat-aatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||| |||| ||||| |||||||||| |||| ||| ||  |||||||||| |||||  ||||||||| |||||||||||||||||||    
T  15414047 ctaccttaacaaacttatcaataatacattaata-cttatttatttgcataagctgttttgcataagctctaaaataagtcaatccaaac 15413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 1473407 - 1473355
Alignment:
Q  156 cttgacaagcttattaataatacataatagcttgttattttgcataagttgtt 208  Q
    |||||||||||||| |||||||||||| ||||| ||  |||||||||||||||    
T  1473407 cttgacaagcttatgaataatacataaaagcttatttatttgcataagttgtt 1473355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 24030270 - 24030182
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| ||||||||||||| |||||||||||| ||||| ||  |||| ||||| |||||   |||||||  ||||||||||| |||||||    
T  24030270 ctactttgacaagcttatgaataatacataaaagcttatttatttggataagctgttttgtataagcttaaaaataagtcattccaaac 24030182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 29922220 - 29922296
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataa 228  Q
    |||||||||||||||||| |||||||||||| | ||| ||  |||||||||  |||||  ||||||||| |||||||    
T  29922220 ctaccttgacaagcttatgaataatacataaaaacttatttatttgcataaactgttttgcataagctcaaaaataa 29922296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 15709935 - 15710014
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    ||||| ||||||||| || | ||| ||  |||||||||||||||| | |||||||| ||||||||  |||||||||||||    
T  15709935 cttataaataatacagaaaaacttatttatttgcataagttgttttatataagctctaaaataagctaatccaaacgggc 15710014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 43268652 - 43268703
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataag 203  Q
    |||||||||| |||||||||||||||||||| ||||| ||  ||||||||||    
T  43268652 ctaccttgaccagcttattaataatacataaaagcttatttatttgcataag 43268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 1868971 - 1869021
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||| | |||  |||||||||||||||||| ||||||||||||||    
T  1868971 tttgcataagctatttttcataagctcgaaaataagccaatccaaacgggc 1869021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 2531368 - 2531290
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacggg 243  Q
    ||||| |||||||||||| | ||| ||  |||||||||||||||| | |||| ||| ||||||| | ||||||||||||    
T  2531368 cttataaataatacataacaacttatttatttgcataagttgttttatataaactctaaaataaattaatccaaacggg 2531290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 9251832 - 9251878
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||| ||||||||||| |||||||||| ||||||||||||| |||||    
T  9251832 tttgaataagttgttttacataagctcaaaaataagtcaattcaaac 9251878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 12467319 - 12467269
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataa 202  Q
    |||||||||||||||||| |||||||||||| ||||| ||  |||||||||    
T  12467319 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 41125717 - 41125671
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||||    
T  41125717 tttgcataagttgttttgcataagctcaaaaataagccaatccaaac 41125671  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 41534678 - 41534628
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataa 202  Q
    |||||||||||||||||| |||||||||||| ||||| ||  |||||||||    
T  41534678 ctaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 41534628  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 2670130 - 2670057
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaa 225  Q
    |||||||||||| ||||| |||| ||||||| || |||||  |||||||||  ||||| |||||||||| ||||    
T  2670130 ctaccttgacaaacttatgaatagtacataaaagattgtttatttgcataaactgttttacataagctcaaaaa 2670057  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 28970152 - 28970197
Alignment:
Q  195 ttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||  ||||||||| |||||||| ||||||||||    
T  28970152 ttgcataagttgttttgcataagctcaaaaataagccaatccaaac 28970197  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 33667442 - 33667515
Alignment:
Q  171 aataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgggc 244  Q
    |||||||||||| | ||| ||  |||||||||| ||||| | |||||||| ||||||||  |||||||||||||    
T  33667442 aataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaacgggc 33667515  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 1372032 - 1372112
Alignment:
Q  160 acaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||| |||||||||||| ||  | ||  ||| |||||  |||||  ||||||||| |||||||||||||||||||    
T  1372032 acaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaaaaataagtcaatccaaac 1372112  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 3520534 - 3520621
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaac 240  Q
    |||||||||||||||||| |||||||| ||| || || ||  ||| |||||  |||||  ||||||||  |||||||||||||||||||    
T  3520534 ctaccttgacaagcttatgaataatac-taaaaggttatttatttacataaactgttttgcataagctaaaaaataagtcaatccaaac 3520621  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 178542 - 178465
Alignment:
Q  165 cttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataagtcaatccaaacgg 242  Q
    ||||| |||||||||||| ||||| ||  ||||||||||||||||   ||||| || ||||||||| |||||||||||    
T  178542 cttataaataatacataaaagcttatttatttgcataagttgtttagtataagttcaaaaataagttaatccaaacgg 178465  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 97237 - 97314
Alignment:
Q  152 ctaccttgacaagcttattaataatacataatagcttgttattttgcataagttgtttcacataagctcgaaaataag 229  Q
    |||||||||| ||||||| |||| ||||||||||||| ||  |||||||||| | ||| ||| |||||  ||||||||    
T  97237 ctaccttgactagcttatgaatactacataatagcttatttatttgcataagctattttacacaagctaaaaaataag 97314  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 48849 - 48878
Alignment:
Q  213 ataagctcgaaaataagtcaatccaaacgg 242  Q
    ||||||||||||||||||||||||||||||    
T  48849 ataagctcgaaaataagtcaatccaaacgg 48878  T

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Target: scaffold1088 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 1307 - 1267
Alignment:
Q  194 tttgcataagttgtttcacataagctcgaaaataagtcaat 234  Q
    ||||||||||||||||  ||||||||| |||||||||||||    
T  1307 tttgcataagttgttttgcataagctctaaaataagtcaat 1267  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 24795 - 24743
Alignment:
Q  157 ttgacaagcttattaataatacataatagcttgttattttgcataagttgttt 209  Q
    ||||||||||||| |||||||||||| ||||| ||  |||||||||| |||||    
T  24795 ttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttt 24743  T

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