View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1158_low_31 (Length: 390)
Name: NF1158_low_31
Description: NF1158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1158_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 34 - 353
Target Start/End: Original strand, 39836450 - 39836767
Alignment:
| Q |
34 |
ctttgtttgtgatcatcaaaatttcaattcgtacctctaacacatattttcgtcatcaaaccatttcatgatatgtatatagtaagt----atatcataa |
129 |
Q |
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| T |
39836450 |
ctttgtttgtgatcatcaaaatttcaattcgtacctctaacacatattttcgtcatcaaaccatttcatgat--gtatatagtaagttagtatatcataa |
39836547 |
T |
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| Q |
130 |
ttaactttgttcatgatcatcacaatttcaattcattgctccatcacttatgccaacacatgtatattttcctcgtcaaaccatcatatttcgttatcac |
229 |
Q |
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| T |
39836548 |
----ctttgttcatgatcatcacaatttcaattcattgctccatcacttatgccaacacatatatattttcctcgtcaaaccatcaaatttcgttatcac |
39836643 |
T |
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| Q |
230 |
tccctttactagtggtccctaaaactctcattaatttgcaatttgactcatccactccatgtggtctggctcccccttactcatcact-ccccatgccat |
328 |
Q |
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| T |
39836644 |
tccctttactagtggtccctaaaactctcattaatttgcaatttgactcatccactcaatgtggtctggct-ccccttactcatcactcccccatgccat |
39836742 |
T |
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| Q |
329 |
ctcatcattttcctataataatgga |
353 |
Q |
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| T |
39836743 |
ctcatcattttcctataataatgga |
39836767 |
T |
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