View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1158_low_62 (Length: 319)
Name: NF1158_low_62
Description: NF1158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1158_low_62 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 87 - 319
Target Start/End: Original strand, 9496344 - 9496576
Alignment:
| Q |
87 |
tctagttctttgggtaataacttacctggagaaattgaagggaaggctggtgattcacatacatatccaattctaaggccaataattattcctaacttgt |
186 |
Q |
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| T |
9496344 |
tctagttctttgggtaataacttacctggagaaattgaagggaaggctggtgattcacatccatatccaattctaaggccaataattattcctaacttgt |
9496443 |
T |
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| Q |
187 |
ctagggaaaggtctatatgtgttgatcataaaagcctttgtgttcctcctaccaggcgggagcagcctcgcataaagcagccaccatcacccatggtgct |
286 |
Q |
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| T |
9496444 |
ctagggaaaggtctatatgtgttgatcataaaagcccttgtgttcctcctaccaggcgggagcagcctcgcataaagcggccaccatcacccgtggtgct |
9496543 |
T |
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| Q |
287 |
ttgtgtaccacgtgcaccacaccctcctccacc |
319 |
Q |
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| T |
9496544 |
ttgtgtaccacgtgcaccacgccctcctccacc |
9496576 |
T |
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