View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11591_high_12 (Length: 229)

Name: NF11591_high_12
Description: NF11591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11591_high_12
NF11591_high_12
[»] chr8 (34 HSPs)
chr8 (1-229)||(28737689-28737917)
chr8 (1-111)||(37372539-37372649)
chr8 (1-142)||(3892220-3892361)
chr8 (1-142)||(27108894-27109035)
chr8 (1-134)||(20182653-20182786)
chr8 (1-134)||(27968378-27968511)
chr8 (1-134)||(27886463-27886596)
chr8 (1-134)||(27945121-27945254)
chr8 (1-134)||(28025364-28025497)
chr8 (3-142)||(7411880-7412019)
chr8 (1-102)||(40412861-40412962)
chr8 (1-142)||(5818052-5818193)
chr8 (1-107)||(8170805-8170911)
chr8 (1-143)||(41098666-41098808)
chr8 (3-83)||(43770881-43770961)
chr8 (1-142)||(32858-33002)
chr8 (3-96)||(32638391-32638484)
chr8 (3-83)||(32877918-32877998)
chr8 (3-81)||(28875742-28875820)
chr8 (6-96)||(45216400-45216490)
chr8 (3-59)||(6028977-6029033)
chr8 (3-59)||(19436737-19436793)
chr8 (3-59)||(19572886-19572942)
chr8 (3-83)||(25022615-25022695)
chr8 (3-81)||(5540285-5540363)
chr8 (3-81)||(42949532-42949610)
chr8 (3-59)||(12579706-12579762)
chr8 (3-59)||(19947552-19947608)
chr8 (3-59)||(32760239-32760295)
chr8 (3-59)||(36484308-36484364)
chr8 (3-59)||(37669453-37669509)
chr8 (16-83)||(4246790-4246857)
chr8 (21-110)||(32425226-32425316)
chr8 (34-74)||(38389011-38389051)
[»] chr1 (35 HSPs)
chr1 (3-142)||(10822650-10822789)
chr1 (1-141)||(14167326-14167466)
chr1 (1-142)||(9528565-9528706)
chr1 (1-142)||(24851748-24851889)
chr1 (1-119)||(32797470-32797588)
chr1 (1-142)||(34432136-34432277)
chr1 (1-133)||(32380779-32380911)
chr1 (1-115)||(29168230-29168344)
chr1 (1-134)||(37922478-37922611)
chr1 (1-142)||(29862053-29862197)
chr1 (1-102)||(3707997-3708098)
chr1 (1-142)||(9781898-9782041)
chr1 (3-142)||(13012573-13012716)
chr1 (3-83)||(3427707-3427787)
chr1 (3-83)||(14334619-14334699)
chr1 (3-83)||(28948384-28948464)
chr1 (1-81)||(36551722-36551802)
chr1 (1-134)||(34096273-34096407)
chr1 (3-83)||(31652992-31653072)
chr1 (1-80)||(24589823-24589901)
chr1 (3-60)||(37346533-37346590)
chr1 (3-59)||(43190131-43190187)
chr1 (34-142)||(47654942-47655050)
chr1 (42-115)||(15417699-15417772)
chr1 (3-83)||(28658578-28658658)
chr1 (3-59)||(5985060-5985116)
chr1 (1-52)||(33040725-33040776)
chr1 (1-47)||(15417920-15417966)
chr1 (3-96)||(25257454-25257544)
chr1 (87-142)||(14334549-14334604)
chr1 (44-134)||(10763917-10764009)
chr1 (49-101)||(2472682-2472734)
chr1 (3-55)||(30324597-30324649)
chr1 (87-138)||(37346626-37346678)
chr1 (1-29)||(38218733-38218761)
[»] chr2 (33 HSPs)
chr2 (1-142)||(4355568-4355709)
chr2 (1-142)||(4562045-4562186)
chr2 (1-142)||(14824395-14824536)
chr2 (3-142)||(24585791-24585931)
chr2 (1-142)||(1005768-1005909)
chr2 (1-142)||(5588294-5588435)
chr2 (1-134)||(31235885-31236018)
chr2 (1-138)||(34146462-34146599)
chr2 (1-142)||(44156854-44156994)
chr2 (1-115)||(40536500-40536614)
chr2 (1-132)||(3564106-3564236)
chr2 (5-142)||(28746385-28746523)
chr2 (1-134)||(45158875-45159008)
chr2 (1-117)||(35996812-35996928)
chr2 (4-142)||(2319553-2319690)
chr2 (1-115)||(12206270-12206384)
chr2 (1-134)||(3545280-3545413)
chr2 (10-142)||(8482647-8482779)
chr2 (1-134)||(35342603-35342736)
chr2 (1-134)||(40431743-40431876)
chr2 (3-83)||(6125034-6125114)
chr2 (3-83)||(12819663-12819743)
chr2 (1-102)||(10573800-10573902)
chr2 (3-142)||(18301373-18301516)
chr2 (38-133)||(9293649-9293744)
chr2 (6-81)||(22485132-22485207)
chr2 (3-58)||(20537214-20537269)
chr2 (3-81)||(40308013-40308091)
chr2 (3-59)||(5371447-5371503)
chr2 (3-59)||(6496849-6496905)
chr2 (1-48)||(14216956-14217003)
chr2 (3-59)||(4169698-4169754)
chr2 (1-76)||(21104817-21104891)
[»] chr4 (33 HSPs)
chr4 (1-142)||(47607357-47607498)
chr4 (1-142)||(1177233-1177375)
chr4 (1-115)||(31945948-31946062)
chr4 (4-142)||(44521748-44521886)
chr4 (1-134)||(3109004-3109137)
chr4 (1-142)||(51859051-51859192)
chr4 (1-115)||(30683381-30683495)
chr4 (1-115)||(40694353-40694467)
chr4 (1-115)||(7952832-7952946)
chr4 (1-110)||(52721663-52721773)
chr4 (1-138)||(24784654-24784791)
chr4 (1-134)||(24793430-24793563)
chr4 (1-138)||(24823475-24823612)
chr4 (8-142)||(36511658-36511795)
chr4 (4-115)||(49470581-49470692)
chr4 (1-115)||(42630177-42630291)
chr4 (1-138)||(17892530-17892667)
chr4 (6-115)||(36943974-36944083)
chr4 (1-142)||(55900847-55900988)
chr4 (1-107)||(258790-258896)
chr4 (6-96)||(5325197-5325287)
chr4 (4-134)||(39957974-39958104)
chr4 (1-142)||(51675045-51675185)
chr4 (1-133)||(14614769-14614894)
chr4 (1-134)||(2586602-2586734)
chr4 (3-96)||(52573035-52573128)
chr4 (3-83)||(43509613-43509693)
chr4 (3-59)||(5835315-5835371)
chr4 (6-96)||(14795857-14795947)
chr4 (3-96)||(41146454-41146546)
chr4 (3-59)||(28377384-28377440)
chr4 (41-115)||(37992295-37992369)
chr4 (16-82)||(3402762-3402828)
[»] chr7 (40 HSPs)
chr7 (1-142)||(23078808-23078949)
chr7 (1-142)||(48153798-48153939)
chr7 (1-142)||(554611-554752)
chr7 (1-142)||(21409643-21409784)
chr7 (1-134)||(44270003-44270136)
chr7 (1-142)||(24956502-24956641)
chr7 (1-121)||(36757711-36757831)
chr7 (1-121)||(36767235-36767355)
chr7 (16-142)||(23969862-23969988)
chr7 (1-134)||(19820697-19820830)
chr7 (1-142)||(38064946-38065086)
chr7 (6-134)||(1399972-1400100)
chr7 (3-83)||(47719856-47719936)
chr7 (1-83)||(11058748-11058830)
chr7 (1-134)||(15878123-15878256)
chr7 (1-121)||(35160162-35160282)
chr7 (1-121)||(36763491-36763610)
chr7 (1-110)||(9250010-9250120)
chr7 (1-110)||(9283560-9283670)
chr7 (1-110)||(25969813-25969923)
chr7 (1-142)||(33454345-33454486)
chr7 (1-119)||(35136305-35136423)
chr7 (1-102)||(21180133-21180234)
chr7 (6-115)||(44959041-44959150)
chr7 (4-96)||(36661313-36661405)
chr7 (1-134)||(36413630-36413763)
chr7 (3-83)||(16563931-16564011)
chr7 (3-83)||(16601651-16601731)
chr7 (3-83)||(26773269-26773349)
chr7 (1-113)||(40053573-40053685)
chr7 (3-83)||(47237927-47238007)
chr7 (3-141)||(19510904-19511046)
chr7 (3-83)||(1042756-1042836)
chr7 (3-83)||(8029159-8029239)
chr7 (3-81)||(4292020-4292098)
chr7 (6-96)||(27397298-27397387)
chr7 (3-81)||(39521427-39521505)
chr7 (1-58)||(26973398-26973455)
chr7 (87-142)||(4291948-4292003)
chr7 (3-96)||(11830537-11830629)
[»] chr5 (40 HSPs)
chr5 (1-142)||(21251740-21251881)
chr5 (1-142)||(26691895-26692036)
chr5 (1-142)||(26961627-26961768)
chr5 (3-142)||(3934510-3934649)
chr5 (1-142)||(7629302-7629443)
chr5 (1-142)||(25749862-25750003)
chr5 (1-142)||(26716529-26716670)
chr5 (1-142)||(26986269-26986410)
chr5 (1-142)||(1795649-1795791)
chr5 (1-115)||(39796665-39796779)
chr5 (1-142)||(3701342-3701482)
chr5 (1-142)||(27938415-27938556)
chr5 (9-142)||(17137962-17138094)
chr5 (1-134)||(43357481-43357613)
chr5 (1-142)||(14836588-14836730)
chr5 (13-142)||(15066469-15066598)
chr5 (1-133)||(6242729-6242861)
chr5 (1-142)||(1921038-1921180)
chr5 (1-110)||(30777109-30777219)
chr5 (1-83)||(42365822-42365904)
chr5 (2-115)||(5722282-5722395)
chr5 (1-104)||(5612172-5612275)
chr5 (12-142)||(11907569-11907699)
chr5 (16-102)||(34032668-34032754)
chr5 (1-102)||(18001677-18001778)
chr5 (3-83)||(39689906-39689986)
chr5 (3-83)||(10657308-10657388)
chr5 (6-142)||(27085627-27085762)
chr5 (1-81)||(41233634-41233714)
chr5 (3-81)||(5985653-5985731)
chr5 (1-83)||(9654065-9654147)
chr5 (3-81)||(30919009-30919087)
chr5 (1-54)||(30284299-30284352)
chr5 (1-60)||(9728109-9728168)
chr5 (1-78)||(22738170-22738250)
chr5 (3-81)||(26794177-26794255)
chr5 (16-83)||(9793159-9793226)
chr5 (1-48)||(35746115-35746162)
chr5 (3-59)||(1638968-1639022)
chr5 (1-46)||(11694466-11694511)
[»] chr3 (46 HSPs)
chr3 (1-134)||(25701049-25701182)
chr3 (1-143)||(7899418-7899560)
chr3 (1-142)||(19878802-19878942)
chr3 (4-115)||(25322219-25322330)
chr3 (1-142)||(20509855-20509996)
chr3 (1-134)||(52684613-52684746)
chr3 (3-142)||(35390141-35390288)
chr3 (1-102)||(212812-212913)
chr3 (1-134)||(21006062-21006195)
chr3 (1-142)||(22289443-22289583)
chr3 (1-142)||(45057000-45057141)
chr3 (1-134)||(47642292-47642425)
chr3 (1-83)||(2566968-2567050)
chr3 (1-115)||(13352894-13353008)
chr3 (1-134)||(28968797-28968930)
chr3 (1-98)||(38888796-38888893)
chr3 (1-104)||(21157459-21157562)
chr3 (1-111)||(2122996-2123106)
chr3 (1-73)||(13748219-13748291)
chr3 (3-83)||(22311191-22311271)
chr3 (1-108)||(983482-983589)
chr3 (3-96)||(48123674-48123767)
chr3 (3-83)||(28882256-28882336)
chr3 (1-60)||(30787285-30787344)
chr3 (1-134)||(29916056-29916190)
chr3 (1-134)||(29965209-29965343)
chr3 (3-81)||(42464316-42464394)
chr3 (3-96)||(25936254-25936347)
chr3 (1-142)||(48333218-48333359)
chr3 (3-83)||(50286923-50287003)
chr3 (3-58)||(33241220-33241275)
chr3 (1-56)||(45347916-45347971)
chr3 (3-81)||(10224335-10224413)
chr3 (6-96)||(52505002-52505092)
chr3 (16-101)||(19421741-19421826)
chr3 (1-81)||(28548363-28548443)
chr3 (1-108)||(47750632-47750739)
chr3 (1-60)||(19349320-19349379)
chr3 (1-48)||(41741866-41741913)
chr3 (3-96)||(45532239-45532331)
chr3 (3-59)||(22610453-22610509)
chr3 (1-142)||(39664671-39664815)
chr3 (3-59)||(52121649-52121705)
chr3 (16-83)||(1678869-1678936)
chr3 (16-83)||(1528892-1528959)
chr3 (16-96)||(28705590-28705670)
[»] chr6 (20 HSPs)
chr6 (1-142)||(6707739-6707880)
chr6 (1-138)||(32018378-32018515)
chr6 (5-142)||(10894221-10894359)
chr6 (1-142)||(19128409-19128551)
chr6 (1-142)||(11105565-11105706)
chr6 (1-115)||(27084257-27084371)
chr6 (1-142)||(13045081-13045221)
chr6 (1-76)||(13061074-13061149)
chr6 (1-110)||(3212878-3212988)
chr6 (1-115)||(3299342-3299456)
chr6 (1-142)||(7255199-7255337)
chr6 (6-96)||(7187957-7188047)
chr6 (3-83)||(32130235-32130315)
chr6 (1-60)||(234653-234712)
chr6 (10-78)||(13607489-13607557)
chr6 (1-107)||(26327608-26327714)
chr6 (3-59)||(8357766-8357822)
chr6 (1-60)||(4153261-4153320)
chr6 (11-142)||(22988838-22988966)
chr6 (11-142)||(23799430-23799558)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-133)||(202482-202607)
scaffold0005 (6-96)||(43784-43874)
[»] scaffold0250 (1 HSPs)
scaffold0250 (3-138)||(5926-6070)
[»] scaffold0060 (1 HSPs)
scaffold0060 (3-81)||(29820-29898)
[»] scaffold0285 (1 HSPs)
scaffold0285 (3-107)||(13690-13794)
[»] scaffold0112 (1 HSPs)
scaffold0112 (5-60)||(41276-41331)


Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 28737917 - 28737689
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||||  ||| ||||||||||||    
T  28737917 tcaacataaatataaataacattgacgattaaaagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcacaataagtgctatactata 28737818  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaacttaagaaaccacaccccaacccacatgtaacaaaaatcacacaacaccaccatttaa 200  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  28737817 tccaaaagaaacattattaatggtatattatatcgatccaaacttaagaaaacacaccccaacccacacgtaacaaaaatcacacaacaccagcatttaa 28737718  T
Q  201 acattcttcccaattttcatgttaaagcc 229  Q
    |||||||||||||||||||||||||||||    
T  28737717 acattcttcccaattttcatgttaaagcc 28737689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37372649 - 37372539
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  37372649 tcaacataaatataaataatattgacgattaagagaatgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactata 37372550  T
Q  101 tcaaaaagaaa 111  Q
    || ||||||||    
T  37372549 tccaaaagaaa 37372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3892361 - 3892220
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||| | ||||||| |||||||||||| ||| || |||||||||    
T  3892361 tcaacataaatataaataatattgacgattaagagagcgatgattagtcaattacatacacaatatatcctaaaaagagcaccataagtgttatactata 3892262  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||| ||| || |||| ||||||||||||||    
T  3892261 tccaaaagaaacattgttagtgctatactatatcaatccaaa 3892220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27108894 - 27109035
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  27108894 tcaacataactataaataatattgacaattaagagagtgatgattagtcaattacatacataatatatcccaaaaagagcacaataagtgctatactata 27108993  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| || ||| ||| || |||| |||||| |||||||    
T  27108994 tccaaaaggaaaattgttagtgttatactatatcgatccaaa 27109035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20182786 - 20182653
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | | |||||||||||||||||||| | |||| |||||||||    
T  20182786 tcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcaccattaatgttatactata 20182687  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  20182686 tccaaaaggaacattgttagtgttatactatatc 20182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27968511 - 27968378
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| ||||||||||||| | | || |||||||||    
T  27968511 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcaccatcagtgttatactata 27968412  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  27968411 tccaaaaggaacattgttagtgttatactatatc 27968378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27886596 - 27886463
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| | |||||| |||||||||| || | | || |||||||||    
T  27886596 tcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactata 27886497  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || |||||||||||| ||| || |||| ||||||    
T  27886496 tccaaaagaaacattgttagtgttatactatatc 27886463  T

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Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27945254 - 27945121
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| | |||||| |||||||||| || | | || |||||||||    
T  27945254 tcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactata 27945155  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || |||||||||||| ||| || |||| ||||||    
T  27945154 tccaaaagaaacattgttagtgttatactatatc 27945121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28025497 - 28025364
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| | |||||| |||||||||| || | | || |||||||||    
T  28025497 tcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagccccatcagtgttatactata 28025398  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || |||||||||||| ||| || |||| ||||||    
T  28025397 tccaaaagaaacattgttagtgttatactatatc 28025364  T

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Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 7412019 - 7411880
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatc 102  Q
    ||||||||| |||||||||||||||||||| ||| || ||||||||||||| |||| | | ||||||||||||| |||||| | ||||||||| ||||||    
T  7412019 aacataaatgtaaataatattgacgattaagagagtggtgattagtcaattgcataaacaatatatcccaaaaatagcaccatcaatgctatattatatc 7411920  T
Q  103 aaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
     |||| ||||||| ||| || |||| |||||| |||||||    
T  7411919 taaaataaacattgttagtgttatactatatcgatccaaa 7411880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40412962 - 40412861
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| |   ||||||||||||    
T  40412962 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactata 40412863  T
Q  101 tc 102  Q
    ||    
T  40412862 tc 40412861  T

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Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5818052 - 5818193
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccct-aaatgctatactat 99  Q
    |||||||||||||||||||||||| | ||||| | | |||||||||||||| |||||||| | |||||||| ||||||||||| | ||||||||||||||    
T  5818052 tcaacataaatataaataatattgtccattaagaaagtgatgattagtcaactacatacacaatatatccc-aaaagagcaccatcaaatgctatactat 5818150  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||  ||||| |||||| ||| || |||| || |||||||||||    
T  5818151 attcaaaaggaacattgttagtgctatactacatcaatccaaa 5818193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8170805 - 8170911
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| | | |||||||| |||    
T  8170805 tcaacgtaaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgctatacaata 8170904  T
Q  101 tcaaaaa 107  Q
    || ||||    
T  8170905 tccaaaa 8170911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41098666 - 41098808
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| ||||||||||||  |||||||||| ||| ||||||||||||||||||||||| | |||||| ||||||||||||  | | || |||||||||    
T  41098666 tcaacattaatataaataattatgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcacaattagtgttatactata 41098765  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaac 143  Q
    || ||||   ||||| |||||| |||| |||||  ||||||||    
T  41098766 tctaaaatgtacattgttaatgttatactatattgatccaaac 41098808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 43770881 - 43770961
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  43770881 aacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 43770961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33002 - 32858
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcc---caaaaagagcaccctaaatgctatact 97  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| | | |||||||    ||||| | || | ||| || ||||||    
T  33002 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatccaaaaaaaaaaaacatcataagtgttatact 32903  T
Q  98 atatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||| |||||||||||| ||| || |||| |||||  |||||||    
T  32902 atatccaaaagaaacattgttagtgttatactatattgatccaaa 32858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 32638391 - 32638484
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  32638391 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 32638484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 32877998 - 32877918
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  32877998 aacataaatataaataatattgacgattaatagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 28875742 - 28875820
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  28875742 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 28875820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 45216400 - 45216490
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  45216400 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcattgctatac 45216490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 6029033 - 6028977
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  6029033 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatac 6028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 19436793 - 19436737
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  19436793 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatac 19436737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 19572942 - 19572886
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  19572942 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatac 19572886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 25022695 - 25022615
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||   |  |||| ||||||||||||||    
T  25022695 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatatgcaaaatataccaaaaagagcacc 25022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 5540363 - 5540285
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | ||||||  |||||||||| | ||||| ||||||||||||    
T  5540363 aacataaatataaataatattgacgattaagagagtgttcattagtttattacatacacaatatataccaaaaagagca 5540285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 42949610 - 42949532
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||    
T  42949610 aacataaatatacataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 42949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 12579706 - 12579762
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||    
T  12579706 aacataaatataaataatattgacgattaagagagtgttcattagtcaattacatac 12579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 19947552 - 19947608
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| | | || |||||||||||||||||||    
T  19947552 aacataaatataaataatattgacgattaacacagtggtgattagtcaattacatac 19947608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 32760295 - 32760239
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||| | ||| || | |||||||||||||||||    
T  32760295 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacatac 32760239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36484364 - 36484308
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||| | ||| || | |||||||||||||||||    
T  36484364 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacatac 36484308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 37669509 - 37669453
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||| | ||| || | |||||||||||||||||    
T  37669509 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacatac 37669453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 4246857 - 4246790
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  4246857 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 4246790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 32425316 - 32425226
Alignment:
Q  21 attgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata-tcaaaaagaa 110  Q
    |||||||||||| ||| |||| ||||| |||||||||||| | |||||||| |||| |||| | | |||| ||||||||| ||||||||||    
T  32425316 attgacgattaagagagtgattattagccaattacatacacaatatatccccaaaatagcatcatcaatgttatactatattcaaaaagaa 32425226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 38389051 - 38389011
Alignment:
Q  34 agaatgatgattagtcaattacatacatattatatcccaaa 74  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  38389051 agaatgatgattagtcaattacatacacaatatataccaaa 38389011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 10822789 - 10822650
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatc 102  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||    
T  10822789 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccgtaagtgctatactatatc 10822690  T
Q  103 aaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
     |||||||||||| ||| || ||||||||||| |||||||    
T  10822689 caaaagaaacattgttagtgatatattatatcgatccaaa 10822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14167466 - 14167326
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||||||||||||||| |||  |||||||||||    
T  14167466 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaagagcaccataagagctatactata 14167367  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaa 141  Q
    || |||||| ||||| ||| || |||| |||||| ||||||    
T  14167366 tccaaaagatacattgttagtgttatactatatcgatccaa 14167326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9528565 - 9528706
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||||  || | ||| ||||||||||||    
T  9528565 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaggacatcataagtgctatactata 9528664  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||  ||| || |||| |||||| |||||||    
T  9528665 tccaaaagaaacatcgttagtgctatactatatcgatccaaa 9528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24851889 - 24851748
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| |   ||||||||||||    
T  24851889 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatttgtgctatactata 24851790  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  24851789 tccaaaacgaacattgttagtgctatactatatcgatccaaa 24851748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32797588 - 32797470
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||| | |||| |||||||||    
T  32797588 tcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcaccatcaatgatatactata 32797489  T
Q  101 tcaaaaagaaacattatta 119  Q
    || ||||  ||||||||||    
T  32797488 tccaaaatgaacattatta 32797470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34432136 - 34432277
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | |||||| |||||||| |||| ||| | ||||||||||    
T  34432136 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatatctcaaaaagaacaccataagtactatactata 34432235  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||  ||||||||||| ||| || |||| |||||| |||||||    
T  34432236 tcccaaagaaacattgttagtgttatactatatcgatccaaa 34432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 32380779 - 32380911
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||||||||| | | || |||||||||    
T  32380779 tcaacataaatataaataatattgacgattaagagagtgatgattagtcgattacatacataatatatcccaaaaagagcaccattagtgttatactata 32380878  T
Q  101 tcaaaaagaaacattattaatggtatattatat 133  Q
    |  ||||| |||||| ||| || |||| |||||    
T  32380879 ttcaaaaggaacattgttagtgttatactatat 32380911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29168344 - 29168230
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| | ||||||| |||||||||| | ||| || |||||||||    
T  29168344 tcaacataaatataaataatatcgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaagagcatcataagtgatatactata 29168245  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||||||||||    
T  29168244 tccaaaagaaacatt 29168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 37922611 - 37922478
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||| ||||||| ||| | || || | ||||||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  37922611 tcaacataaatataaataatattggcgattaagagagttataatcaatcaattacatacacaatatatcccaaaaagagcaccatcaatgctatactata 37922512  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || |||||||||||| ||| || |||| ||||||    
T  37922511 tccaaaagaaacattgttagtgctatactatatc 37922478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 29862197 - 29862053
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagag---caccctaaatgctatact 97  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||| |    |||  ||| || ||||||    
T  29862197 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaaaaacactataagtgatatact 29862098  T
Q  98 atatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||| |||||||||||| ||| ||||||| | ||||||||||||    
T  29862097 atatccaaaagaaacattgttagtggtatactttatcaatccaaa 29862053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3707997 - 3708098
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||| |||   | ||||||||||||    
T  3707997 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagaggaccaccagtgctatactata 3708096  T
Q  101 tc 102  Q
    ||    
T  3708097 tc 3708098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9782041 - 9781898
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatccca--aaaagagcaccctaaatgctatacta 98  Q
    ||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||| |||| | |||||||||  |||| |||||| ||| ||||||||||    
T  9782041 tcaacataaatataaataatattgatgattaagagagtgacgattagtcaattacgtacacaatatatcccaaaaaaaaagcaccataagtgctatacta 9781942  T
Q  99 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||| |||||||||||| ||| || |||| | |||| |||||||    
T  9781941 tatccaaaagaaacattgttagtgctatactgtatcgatccaaa 9781898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 13012573 - 13012716
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacccta----aatgctatacta 98  Q
    |||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||  |  |||| |||||||||||||| ||    |||| |||||||    
T  13012573 aacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacatcaatgttatacta 13012672  T
Q  99 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||| ||||| ||||||  || || ||||||||||| |||||||    
T  13012673 tatctaaaaggaacattgctagtgctatattatatcgatccaaa 13012716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 3427787 - 3427707
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  3427787 aacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 3427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 14334699 - 14334619
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||  |||| ||||||||||||||    
T  14334699 aacataaatataaataatattgacgattaagagagtgttgattagtcaattacatacgtaaaatataccaaaaagagcacc 14334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 28948384 - 28948464
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||| | ||||| ||||||||||||||    
T  28948384 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 28948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36551802 - 36551722
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||||| | ||||||||||||||||||    
T  36551802 tcaacataaatataaataatattgacgattaagagagtgattgttagccaattacatacacaatatatcccaaaaagagca 36551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34096273 - 34096407
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatccc-aaaaagagcaccctaaatgctatactat 99  Q
    ||||||||||||||||||||||||| |||||| ||| ||| ||| | ||||||||||||| | ||| |||| ||||| | || | ||| |||||||||||    
T  34096273 tcaacataaatataaataatattgatgattaagagagtgacgatcaatcaattacatacacaatatgtcccaaaaaaaaacatcgtaagtgctatactat 34096372  T
Q  100 atcaaaaagaaacattattaatggtatattatatc 134  Q
    ||| |||||||||||| ||| || |||| ||||||    
T  34096373 atctaaaagaaacattgttagtgctatactatatc 34096407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 31652992 - 31653072
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  31652992 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 31653072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24589823 - 24589901
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagc 80  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| | ||||||  |||||||||    
T  24589823 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattac-tacacaatatatcttaaaaagagc 24589901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 37346533 - 37346590
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  37346533 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacataca 37346590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 43190187 - 43190131
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  43190187 aacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatac 43190131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 47655050 - 47654942
Alignment:
Q  34 agaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 133  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||| | | | ||||||| |||||| ||||  |||||| ||| || |||| |||||    
T  47655050 agaatgatgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaaatgaacattgttagtgttatactatat 47654951  T
Q  134 caatccaaa 142  Q
    | |||||||    
T  47654950 cgatccaaa 47654942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 15417772 - 15417699
Alignment:
Q  42 gattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 115  Q
    ||||||||||||||||| | | |||||||||||||||| ||| | |||| ||||||||||||||||| ||||||    
T  15417772 gattagtcaattacatatacaatatatcccaaaaagaggaccatcaatgttatactatatcaaaaaggaacatt 15417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 28658578 - 28658658
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || | ||||||||||||||||   | ||||| ||||||||| ||||    
T  28658578 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatatgcaatatataccaaaaagaacacc 28658658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 5985116 - 5985060
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || | |||||| ||||||||||    
T  5985116 aacataaatataaataatattgacgattaagagagtggtcattagtaaattacatac 5985060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33040776 - 33040725
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaat 52  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||| |||||    
T  33040776 tcaacataaatataaataatattgacgattaagagagtgattattattcaat 33040725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15417966 - 15417920
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattag 47  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  15417966 tcaacataaatataaataatattgacgattaagagagtgaagattag 15417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 25257544 - 25257454
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||||||||| ||| ||  | ||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  25257544 aacataaatataaataatattgacgattaagagagtg--gtttagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 25257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 14334604 - 14334549
Alignment:
Q  87 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  14334604 aatgctatactatatccaaaagaaacattgttagtgctatactatatcgatccaaa 14334549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 10764009 - 10763917
Alignment:
Q  44 ttagtcaattacatacatattatatcccaaaaaga--gcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 134  Q
    ||||||||||||||||| | ||||| ||||||| |  ||||| ||| || ||| ||||||| |||||||||||| ||| || |||| ||||||    
T  10764009 ttagtcaattacatacacaatatattccaaaaaaaaagcaccataagtgatattctatatccaaaagaaacatttttagtgctatactatatc 10763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 2472682 - 2472734
Alignment:
Q  49 caattacatacatattatatcccaaaaagagcaccctaaatgctatactatat 101  Q
    |||||||||||| | ||||||| |||||||||||| | | |||||||||||||    
T  2472682 caattacatacacaatatatcctaaaaagagcaccatcagtgctatactatat 2472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30324649 - 30324597
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattac 55  Q
    |||||||||||||||||||||| ||| ||| ||| || | |||||||||||||    
T  30324649 aacataaatataaataatattggcgaataagagagtggtcattagtcaattac 30324597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 37346626 - 37346678
Alignment:
Q  87 aatgctatactatatcaaaaa-gaaacattattaatggtatattatatcaatc 138  Q
    ||||||||||||||||||||| | |||||| |||||| |||| ||||||||||    
T  37346626 aatgctatactatatcaaaaagggaacattgttaatgctatactatatcaatc 37346678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 38218761 - 38218733
Alignment:
Q  1 tcaacataaatataaataatattgacgat 29  Q
    |||||||||||||||||||||||||||||    
T  38218761 tcaacataaatataaataatattgacgat 38218733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4355709 - 4355568
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||||    
T  4355709 tcaacataaatataaataatattgacgactaagagagtgatgattagtcaattacatacataatatatcccaaaaagagccccataagtgctatactata 4355610  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||| ||| || |||| |||||| |||||||    
T  4355609 tccaaaagaaacattgttagtgttatactatatcgatccaaa 4355568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4562186 - 4562045
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||| ||| ||| | ||||||||||    
T  4562186 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagtaccataagtactatactata 4562087  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || |||| ||||||||||||||    
T  4562086 tccaaaaggaacattgttagtgatatactatatcaatccaaa 4562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14824536 - 14824395
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  14824536 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactata 14824437  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  14824436 tccaaaaagaacattgttagtgctatactatatcgatccaaa 14824395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 24585931 - 24585791
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatat- 101  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||||||||     
T  24585931 aacataaatataaataatattgacgattaagagagtgaagattagtcaattacatacagaatatatcccaaaaagagtaccataagtgctatactatatc 24585832  T
Q  102 caaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||||||||| ||| || |||| |||||| |||||||    
T  24585831 caaaaagaaacattgttagtgctatactatatcgatccaaa 24585791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1005909 - 1005768
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | ||||||| |||||||||||| ||| ||||||||||||    
T  1005909 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcaccataagtgctatactata 1005810  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| || ||| ||| || |||| |||||| |||||||    
T  1005809 tccaaaaggaatattgttagtgttatactatatcgatccaaa 1005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5588435 - 5588294
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||| || |||||||| ||| || |||||| ||    
T  5588435 tcaacataaatataaataatattgatgattaagagaatgatgattagtcaattacatacacaatatatcccgaagagagcaccataagtgatatactgta 5588336  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |  |||||||||||| ||| || ||||||||||| |||||||    
T  5588335 tgcaaaagaaacattgttagtgttatattatatcgatccaaa 5588294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31235885 - 31236018
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| | |||||||||||||||||| | | |||| |||||||||    
T  31235885 tcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcatcaatgatatactata 31235984  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  31235985 tccaaaaggaacattgttagtgttatactatatc 31236018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 34146599 - 34146462
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| | |||||||||||||||||| | | |||| |||||||||    
T  34146599 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacctacacaatatatcccaaaaagagcatcatcaatgttatactata 34146500  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    || ||||| |||| | ||| || |||| ||||||||||    
T  34146499 tccaaaaggaacactgttagtgctatactatatcaatc 34146462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44156994 - 44156854
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |  ||| |||||||||||||||  || || |||||||||    
T  44156994 tcaacataaatataaataatattgacgattaaaagagtgatgattagtcaattacatacacaacata-cccaaaaagagcaccacaagtgttatactata 44156896  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || | |||||||||| ||| |  ||||||||||| |||||||    
T  44156895 tccagaagaaacattgttagttctatattatatcgatccaaa 44156854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40536614 - 40536500
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | | ||||| |||||||||||||| | |||| |||||||||    
T  40536614 tcaacataaatataagtaatattgacgattaaaagagtgatgattagtcaattacatatacaatatattccaaaaagagcaccatcaatgttatactata 40536515  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  40536514 tccaaaaggaacatt 40536500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 3564236 - 3564106
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||| | |||||||||||||||||| | ||| || |||||||||    
T  3564236 tcaacataaatataa-taatattgacgattaagagagtgatgattagtcaattgcatacacaatatatcccaaaaagagcatcataactgttatactata 3564138  T
Q  101 tcaaaaagaaacattattaatggtatattata 132  Q
    || ||||||| |||| |||||| |||| ||||    
T  3564137 tccaaaagaagcattgttaatgctatactata 3564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 28746385 - 28746523
Alignment:
Q  5 cataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcc-caaaaagagcaccctaaatgctatactatatca 103  Q
    ||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||| | |||||||  ||||| |||||| ||| ||||||||||||||     
T  28746385 cataaatataaataatattgatgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcaccataagtgctatactatatcc 28746484  T
Q  104 aaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||||||| ||| || |||| |||||| |||||||    
T  28746485 aaaagaaacattgttattgttatactatatcgatccaaa 28746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 45158875 - 45159008
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| |   ||||||||||||    
T  45158875 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactata 45158974  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||| ||||||    
T  45158975 tccaaaaagaacatttttagtgctatactatatc 45159008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35996928 - 35996812
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| || | |||||||||||| ||||||| ||| || |||||||||    
T  35996928 tcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatgcacaatatatcccaaaaggagcaccataagtgttatactata 35996829  T
Q  101 tcaaaaagaaacattat 117  Q
    || ||||  ||||||||    
T  35996828 tccaaaatgaacattat 35996812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 2319690 - 2319553
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  || | | |||||||||||||||||| | | |  | |||||||||||     
T  2319690 acattaatataaataatattgacgattaaaagaatgatgattagtcaattaattagaaaatatatcccaaaaagagca-catcatggatatactatatcc 2319592  T
Q  104 aaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||| |||||| ||| || |||| ||||||||||||||    
T  2319591 aaaaggaacattgttagtgttatactatatcaatccaaa 2319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12206384 - 12206270
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| | ||||||| ||||| |||||| | |||| |||| ||||    
T  12206384 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatacaaaatatatccgaaaaaaagcaccatcaatgttatattata 12206285  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  12206284 tccaaaaggaacatt 12206270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3545280 - 3545413
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||| | ||||||| |||| ||||| | | | || |||||||||    
T  3545280 tcaacataaatataaataatattgacgattaagagagtgataattaatcaattacatacacaatatatcctaaaaggagcatcatcagtggtatactata 3545379  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || |||||||| ||||||| || |||| ||||||    
T  3545380 tccaaaagaaatattattagtgctatactatatc 3545413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 8482647 - 8482779
Alignment:
Q  10 atataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaaga 109  Q
    ||||| ||||||||| ||||||| ||| |||| ||| |||||||||| ||| | |||||||||||| ||||||| |   |||||||||||||| |||||     
T  8482647 atatagataatattgtcgattaagagagtgattattggtcaattacaaacacaatatatcccaaaacgagcaccatcggtgctatactatatccaaaagg 8482746  T
Q  110 aacattattaatggtatattatatcaatccaaa 142  Q
    |||||| |||||| ||||||||||| |||||||    
T  8482747 aacattgttaatgttatattatatcgatccaaa 8482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 35342736 - 35342603
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||| ||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | ||||||| |||||||||| | | | || |||| ||||    
T  35342736 tcaaaataaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcctaaaaagagcatcatcagtgttatattata 35342637  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  35342636 tccaaaaggaacattgttagtgttatactatatc 35342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40431743 - 40431876
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||| |||||||||||| |||||| ||| ||||| ||||||||||||||||| |  |||||| |||||||||||| |   || |||||||||    
T  40431743 tcaacataaatacaaataatattgatgattaacagagtgatgcttagtcaattacatacacaaaatatcctaaaaagagcaccatcggtgttatactata 40431842  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  40431843 tccaaaaggaacattgttagtgttatactatatc 40431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 6125114 - 6125034
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  6125114 aacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 6125034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12819743 - 12819663
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||  |||| ||||||||||||||    
T  12819743 aacataaatataaataatattgacgattaatagagtggtgattagtcaattacatacgtaaaatataccaaaaagagcacc 12819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10573902 - 10573800
Alignment:
Q  1 tcaacataaatataaataa-tattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactat 99  Q
    ||||||||||||||||||| |||||||||||||  || ||||||||||||||||||||| | | |||||| |||||||||||||   |||| ||||||||    
T  10573902 tcaacataaatataaataaatattgacgattaagtgagtgatgattagtcaattacatatacaatatatctcaaaaagagcaccaccaatgatatactat 10573803  T
Q  100 atc 102  Q
    |||    
T  10573802 atc 10573800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 18301516 - 18301373
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacccta----aatgctatacta 98  Q
    |||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||  |  |||| |||||||||||||| ||    |||| |||| ||    
T  18301516 aacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacatcaatgttatatta 18301417  T
Q  99 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||| ||||| ||||||  || || ||||||||||| |||||||    
T  18301416 tatccaaaaggaacattgctagtgctatattatatcgatccaaa 18301373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 9293744 - 9293649
Alignment:
Q  38 tgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 133  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| | |||| ||||||||||| ||||  |||||| ||| || ||||| ||||    
T  9293744 tgatgattagtcaattaaatgcatattatatcccaaaaagagcaccattaatgttatactatatccaaaaagaacattgttagtgctatataatat 9293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 22485207 - 22485132
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||| | ||||| ||||||||||||    
T  22485207 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagca 22485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 20537269 - 20537214
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacata 58  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  20537269 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 20537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 40308013 - 40308091
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| || |||||||||    
T  40308013 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatactcaatatataccgaaaagagca 40308091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 5371503 - 5371447
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||    
T  5371503 aacataaatatacataatattgacgattaagagagtggtgattagtcaattacatac 5371447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6496849 - 6496905
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||| ||||| || | |||||||||||||||||    
T  6496849 aacataaatataaataatattgacgattgaaagagtggtcattagtcaattacatac 6496905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14216956 - 14217003
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagt 48  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14216956 tcaacataaatataaataatattgacgattaagagagtgatgattagt 14217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4169698 - 4169754
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| |  | |||||||||||||||||    
T  4169698 aacataaatataaataatattgacgattaagagagtagtcattagtcaattacatac 4169754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21104891 - 21104817
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaa 76  Q
    |||||||||| ||||||||||||||||||||| ||| |||| | ||  |||||||||||| | |||||||||||||    
T  21104891 tcaacataaacataaataatattgacgattaagagagtgatta-taaccaattacatacacaatatatcccaaaaa 21104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 47607498 - 47607357
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| | | |||| |||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  47607498 tcaacataaatataaataatattgacgattaagatagtgataattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactata 47607399  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||| ||  || ||||||||||| |||||||    
T  47607398 tccaaaagaaacattgttggtgctatattatatcgatccaaa 47607357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1177375 - 1177233
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatccca-aaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||| |||| || ||| ||| |||||||||||    
T  1177375 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaagtaccataagtgctatactat 1177276  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||| |||||||||||| ||| || |||| ||||||||||||||    
T  1177275 atccaaaagaaacattgttagtgctatactatatcaatccaaa 1177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31945948 - 31946062
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  31945948 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatactata 31946047  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  31946048 tctaaaaggaacatt 31946062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 44521748 - 44521886
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| |  ||||| |||||| |||||| | | ||||||||||||||     
T  44521748 acataaatataaataacattgacgattaagagagtgatgattagtcaattacatacacaaaatatctcaaaaaaagcaccattagtgctatactatatcc 44521847  T
Q  104 aaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||| |||||| |||||| |||| |||||| |||||||    
T  44521848 aaaaggaacattgttaatgttatactatatcgatccaaa 44521886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3109004 - 3109137
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| | |||||||||||||||||||| |   || |||||||||    
T  3109004 tcaacataaatataaataatattgacgattaaaagagtgattattagccaattacatacacaatatatcccaaaaagagcaccatctgtgttatactata 3109103  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  3109104 tccaaaaggaacattgttagtgttatactatatc 3109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 51859192 - 51859051
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| | || | |||||| ||||||||||| | ||| ||||||||||||    
T  51859192 tcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcacaaaaagagcatcataagtgctatactata 51859093  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||| ||| || |||| |||||| |||||||    
T  51859092 tccaaaagaaacattgttagtgttatactatatcgatccaaa 51859051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30683381 - 30683495
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||| ||| |||||||||||||||||||| | |||| |||||||||    
T  30683381 tcaacataaatataaataatatcgacgattaagagagtgatgattaatcaattacatatataatatatcccaaaaagagcaccatcaatgttatactata 30683480  T
Q  101 tcaaaaagaaacatt 115  Q
    |  ||||| ||||||    
T  30683481 ttcaaaaggaacatt 30683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40694467 - 40694353
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| | ||| || |||| ||||    
T  40694467 tcaacataaatataaataatatcgacaattaagagagtgatgattagtcaattacatacgtaatatatcccaaaaagagcatcataagtgatatattata 40694368  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||||||||||    
T  40694367 tccaaaagaaacatt 40694353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7952832 - 7952946
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| ||||  | | |||| |||||||||    
T  7952832 tcaacataaatataagtaatattgacgattaaaagagtgatgattaatcaattacatatataatatatcccaaaaggagcgtcatcaatgttatactata 7952931  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  7952932 tccaaaaggaacatt 7952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52721773 - 52721663
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | |||| |||||||||    
T  52721773 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcaatgatatactata 52721674  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  52721673 ttcaaaaagaa 52721663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 24784791 - 24784654
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | |   ||||||||||||    
T  24784791 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgctatactata 24784692  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    || ||||  ||||||  || || |||| ||||||||||    
T  24784691 tccaaaaagaacattgatagtgctatactatatcaatc 24784654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24793430 - 24793563
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||| ||||| | |||||||||||||||||| | | | || |||||||||    
T  24793430 tcaacataaatataaataatattgacgattaagagagtgattattagccaattagatacacaatatatcccaaaaagagcatcatcagtgttatactata 24793529  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  24793530 tccaaaaggaacattgttagtgttatactatatc 24793563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24823475 - 24823612
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | |   ||||||||||||    
T  24823475 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgctatactata 24823574  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    || ||||  ||||||  || || |||| ||||||||||    
T  24823575 tccaaaaagaacattgatagtgctatactatatcaatc 24823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 36511658 - 36511795
Alignment:
Q  8 aaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatc---ccaaaaagagcaccctaaatgctatactatatcaa 104  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||     ||||| | |||| ||| |||||||||||||| |    
T  36511658 aaatataaataatattgacgattaagagagtgacgattagtcaattacatacaaaatatatcaaaaaaaaaaaaacaccataagtgctatactatatcca 36511757  T
Q  105 aaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||||||||| ||| || ||||||||||| |||||||    
T  36511758 aaagaaacattcttagtgctatattatatcgatccaaa 36511795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 49470692 - 49470581
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| | ||| | |||||||| ||| | | ||||||||||||||||     
T  49470692 acataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatattttccaaaaagtgcatcatcaatgctatactatatcc 49470593  T
Q  104 aaaagaaacatt 115  Q
    ||||| ||||||    
T  49470592 aaaaggaacatt 49470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 42630177 - 42630291
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||| ||||| |||| | | | || |||||| ||    
T  42630177 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaaaagcatcatcagtgttatactcta 42630276  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  42630277 tccaaaaggaacatt 42630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17892667 - 17892530
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | ||||  |||||||||||| | | | || |||||||||    
T  17892667 tcaacataaatataaataatattgacgattaagagagtgattattagacaattacatacacaatataaaccaaaaagagcatcatcagtgttatactata 17892568  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    |  ||||| |||||| ||| || |||| ||||||||||    
T  17892567 ttcaaaaggaacattgttagtgttatactatatcaatc 17892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 36944083 - 36943974
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaa 105  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | |||||||||||||||||| | | | || ||||||||||| ||    
T  36944083 ataaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcccaaaaagagcatcatcagtgttatactatatccaa 36943984  T
Q  106 aagaaacatt 115  Q
    ||| ||||||    
T  36943983 aaggaacatt 36943974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 55900847 - 55900988
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||| ||| | |||||||  ||||||||||||||||||||||||||| | ||||| |||||||||||| | | | ||||||| ||||    
T  55900847 tcaacataaatataaattatactcacgattacgagaatgatgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgctatattata 55900946  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  55900947 tccaaaatgaacattgttagtgttatactatatcgatccaaa 55900988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 258790 - 258896
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| | |||||| ||||||||| ||| ||| || |||||||||    
T  258790 tcaacttaaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatctcaaaaagagtaccataagtgttatactata 258889  T
Q  101 tcaaaaa 107  Q
    || ||||    
T  258890 tccaaaa 258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 5325197 - 5325287
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||  | ||||| |||||||||||||| ||| ||||||||    
T  5325197 ataaatataaataatattgacgattaagagagtgatcattagtcaattacatacgcaatatataccaaaaagagcaccataagtgctatac 5325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 39958104 - 39957974
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | |   || |||||||||||     
T  39958104 acataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcggtgttatactatatct 39958005  T
Q  104 aaaagaaacattattaatggtatattatatc 134  Q
    ||||  |||||| ||| || |||| ||||||    
T  39958004 aaaaagaacattgttagtgctatactatatc 39957974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 51675185 - 51675045
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| | | ||||| |||||||||| | | ||| || |||||||||    
T  51675185 tcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatatacaatatat-ccaaaaagagaatcataagtgttatactata 51675087  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    | | |||| || ||| ||| || |||| |||||| |||||||    
T  51675086 ttagaaaggaatattgttagtgatatactatatctatccaaa 51675045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 14614894 - 14614769
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || | |||||| |||  ||||    
T  14614894 tcaacataaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatcataaatgttatgttata 14614802  T
Q  101 tcaaaaagaaacattattaatggtatattatat 133  Q
    || |||||||| ||| ||| || ||||||||||    
T  14614801 tccaaaagaaatattgttagtgctatattatat 14614769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 2586734 - 2586602
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | |||| ||  ||||||||| | | | || |||| ||||    
T  2586734 tcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatata-cctcaaaagagcatcatcagtgttatattata 2586636  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| |||||| |||| ||||||    
T  2586635 tccaaaaggaacattgttaatgttatactatatc 2586602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 52573128 - 52573035
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  52573128 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcagtatataccaaaaagagcaccatcagtgctatac 52573035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 43509613 - 43509693
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  43509613 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 43509693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 5835371 - 5835315
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  5835371 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatac 5835315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 14795947 - 14795857
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  14795947 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatcagtgctatac 14795857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 41146546 - 41146454
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  41146546 aacataaatataaataatattgacaattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 41146454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 28377440 - 28377384
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||| | ||||| ||| || |||||||||||||||||||    
T  28377440 aacataaatataaataatattggcaattaagagagtggtgattagtcaattacatac 28377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 37992295 - 37992369
Alignment:
Q  41 tgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 115  Q
    ||||||||| |||||||||  | |||||||||||||||||||| | | ||||||| |||||| ||||| ||||||    
T  37992295 tgattagtcgattacatacccaatatatcccaaaaagagcaccattagtgctatattatatccaaaaggaacatt 37992369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 3402762 - 3402828
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcac 82  Q
    |||||||||| |||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||    
T  3402762 ataatattgatgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcac 3402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 23078808 - 23078949
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||||||||| | | | ||||||||||||    
T  23078808 tcaacataaatataaataatattgacgattaagagagtgatgattactcaattacatacacaatatatcccaaaaagagcatcatcagtgctatactata 23078907  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||| |||||| ||| || |||| |||||| |||||||    
T  23078908 tcaaaaaggaacattgttagtgctatactatatcgatccaaa 23078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 48153939 - 48153798
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||| | ||| ||||||||||||    
T  48153939 tcaacataaatataaataatggtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcataagtgctatactata 48153840  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || |||| |||||| |||||||    
T  48153839 tccaaaaggaacattgttagtgctatactatatcgatccaaa 48153798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 554611 - 554752
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||| | ||| || |||||||||    
T  554611 tcaacataaatataagtaatattaacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatcataagtgatatactata 554710  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||| ||||| ||| || |||| |||||| |||||||    
T  554711 tctaaaagatacattgttagtgttatactatatcgatccaaa 554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21409784 - 21409643
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||| |||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | ||| ||||||||||||    
T  21409784 tcaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattacatacacaatatattccaaaaagagcaacataagtgctatactata 21409685  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||| ||| ||| || |||| |||||| |||||||    
T  21409684 tccaaaagaaatattgttagtgctatactatatcgatccaaa 21409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44270136 - 44270003
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | | |||||||||||||||||||| | |||| |||||||||    
T  44270136 tcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcaccattaatgttatactata 44270037  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  44270036 tccaaaaggaacattgttagtgttatactatatc 44270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24956641 - 24956502
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaa-tgctatactat 99  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||||||      
T  24956641 tcaacataaatataaataatattgacaattaatagagtgatgattagtcaattacatacataatatatcccaaagagagcaccataaagtgctatact-- 24956544  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
     || |||||||||||| ||| || |||| |||||| |||||||    
T  24956543 -tccaaaagaaacattgttagtgctatactatatcgatccaaa 24956502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36757711 - 36757831
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||| || |||||| | | ||||||||||||    
T  36757711 tcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcaccatcagtgctatactata 36757810  T
Q  101 tcaaaaagaaacattattaat 121  Q
    || ||||| |||||| |||||    
T  36757811 tccaaaaggaacattgttaat 36757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36767235 - 36767355
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||| || |||||| | | ||||||||||||    
T  36767235 tcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcaccatcagtgctatactata 36767334  T
Q  101 tcaaaaagaaacattattaat 121  Q
    || ||||| |||||| |||||    
T  36767335 tccaaaaggaacattgttaat 36767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 23969862 - 23969988
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 115  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| | | |||||||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  23969862 ataatagtgacgattaagagagtgatgattagtcaattacatacacaatttatcccaaaaagagcaccataagtgctatactatatccaaaaggaacatt 23969961  T
Q  116 attaatggtatattatatcaatccaaa 142  Q
     ||| || |||| |||||| |||||||    
T  23969962 gttagtgctatactatatcgatccaaa 23969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 19820697 - 19820830
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || | |||||| ||||||||||||| | | |  |||||||||    
T  19820697 tcaacataaatataaataatattgacgattaaaatagtgatgattagtcaattacatgcacaatatatctcaaaaagagcaccatcagtattatactata 19820796  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  19820797 tccaaaaggaacattgttagtgctatactatatc 19820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38065086 - 38064946
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||| |||||||| |||||| | | | ||||||||||||||||||||  | |||||||||||||||||||| | | ||||||||||||    
T  38065086 tcaacataaatataaacaatattgatgattaagatagtcatgattagtcaattacatacgcaatatatcccaaaaagagcaccat-agtgctatactata 38064988  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || ||||||||||| |||||||    
T  38064987 tccaaaaggaacattgttagtgttatattatatcgatccaaa 38064946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 1399972 - 1400100
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaa 105  Q
    ||||||||||||||||||||||||||| | | |||| |||||||||||||||||| | |||||||||||||||||| | | |||| ||||||||||| ||    
T  1399972 ataaatataaataatattgacgattaagatagtgattattagtcaattacatacacaatatatcccaaaaagagcatcatcaatgttatactatatccaa 1400071  T
Q  106 aagaaacattattaatggtatattatatc 134  Q
    ||| |||||| ||| || |||| ||||||    
T  1400072 aaggaacattgttagtgttatactatatc 1400100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 47719856 - 47719936
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  47719856 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacataatatataccaaaaagagcacc 47719936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11058830 - 11058748
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  11058830 tcaacataaatataagtaatattgacgattaagagaatgatgatttgtcaattacatatataatatatcccaaaaagagcacc 11058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15878123 - 15878256
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | |||||||||||||||||| | | | || |||||||||    
T  15878123 tcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcatcatcagtgttatactata 15878222  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||| ||||||    
T  15878223 tccaaaatgaacattgttagtgttatactatatc 15878256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35160282 - 35160162
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||| ||| |  ||||| ||| ||||||||||||||||||||||| | ||||||||||||| |||||| | | ||||||||||||    
T  35160282 tcaacataaatataaataacattaataattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcaccattagtgctatactata 35160183  T
Q  101 tcaaaaagaaacattattaat 121  Q
    || ||||| |||||| |||||    
T  35160182 tccaaaaggaacattgttaat 35160162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36763491 - 36763610
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||| | ||||| ||||||| |||||| | | ||||||||||||    
T  36763491 tcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaaaagcaccatcagtgctatactata 36763589  T
Q  101 tcaaaaagaaacattattaat 121  Q
    || ||||| |||||| |||||    
T  36763590 tccaaaaggaacattgttaat 36763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9250010 - 9250120
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | | || |||||||||    
T  9250010 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactata 9250109  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  9250110 ttcaaaaagaa 9250120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9283560 - 9283670
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | | || |||||||||    
T  9283560 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactata 9283659  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  9283660 ttcaaaaagaa 9283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25969923 - 25969813
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | | || |||||||||    
T  25969923 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactata 25969824  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  25969823 ttcaaaaagaa 25969813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33454486 - 33454345
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||| |||  ||||||||| |||||||||||||||| |||||||||| | ||||| |||||||||||| | | | ||||||| ||||    
T  33454486 tcaacataaatataaattataccgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattata 33454387  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  33454386 tccaaaatgaacattgttagtgttatactatatcgatccaaa 33454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35136423 - 35136305
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||| | | |||||| ||||||||||| | | ||||||||| ||||    
T  35136423 tcaacataaatataagtaatattggcaattaagagaatgatgattagtcaattacatatacaatatatctcaaaaagagcatcattaatgctataatata 35136324  T
Q  101 tcaaaaagaaacattatta 119  Q
    |  ||||  ||||||||||    
T  35136323 ttcaaaatgaacattatta 35136305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21180234 - 21180133
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| || | | | || |||||||||    
T  21180234 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattagatatacaatatatcccaaaaagaacatcatcagtgttatactata 21180135  T
Q  101 tc 102  Q
    ||    
T  21180134 tc 21180133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 44959041 - 44959150
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaa 105  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| ||||||||||||  | | || | ||||||||| ||    
T  44959041 ataaacataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcactatgagtgttgtactatatccaa 44959140  T
Q  106 aagaaacatt 115  Q
    ||| ||||||    
T  44959141 aaggaacatt 44959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 36661405 - 36661313
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||||| ||| || | ||||||||||||||||| || ||||| |||||||||||||| | | ||||||||    
T  36661405 acataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgtaatatataccaaaaagagcaccatcagtgctatac 36661313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36413763 - 36413630
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| ||||||  || ||||| ||| ||||||||||||| | ||||||| |||||||||| | |   || |||||||||    
T  36413763 tcaacataaatataaataatattgatgattaagtgagtgatgcttaatcaattacatacacaatatatcctaaaaagagcatcatcggtgttatactata 36413664  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  36413663 tccaaaaggaacattgttagtgttatactatatc 36413630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 16563931 - 16564011
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  16563931 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16564011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 16601731 - 16601651
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  16601731 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 26773269 - 26773349
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  26773269 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 26773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40053685 - 40053573
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||   | |||| | ||||||||||||| | | || |||||||||    
T  40053685 tcaacataaatataaataatattgatgactaagagagtgatgattagtcaattacatatgcaatatacctcaaaaagagcaccatcagtgttatactata 40053586  T
Q  101 tcaaaaagaaaca 113  Q
    || ||||| ||||    
T  40053585 tccaaaaggaaca 40053573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 47237927 - 47238007
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||  |  |||| ||||||||||||||    
T  47237927 aacataaatataaataatattgacgattaagaaagtgatgattagtcaattacatacgcaaaatataccaaaaagagcacc 47238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 19511046 - 19510904
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacccta----aatgctatacta 98  Q
    |||| ||||||||||||||||||| ||||| ||| || |||||||||||||||||||  |  |||| | |||||||||||| ||    |||| |||||||    
T  19511046 aacaaaaatataaataatattgacaattaagagagtggtgattagtcaattacatactcaaaatatacaaaaaagagcaccatacatcaatgttatacta 19510947  T
Q  99 tatcaaaaagaaacattattaatggtatattatatcaatccaa 141  Q
    |||| ||||| ||||||  || || ||||||||||| ||||||    
T  19510946 tatccaaaaggaacattgctagtgttatattatatcgatccaa 19510904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 1042756 - 1042836
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  1042756 aacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 1042836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 8029239 - 8029159
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||  |  |||| ||||||||||||||    
T  8029239 aacataaatataaataatattgacgattaagagagtggtgattagtcacttacatacgcaaaatataccaaaaagagcacc 8029159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 4292098 - 4292020
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||| |||| |||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||    
T  4292098 aacataaatataaatactattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 4292020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 27397298 - 27397387
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  27397298 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 27397387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 39521505 - 39521427
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | |||| ||||||||||||  | ||||| | ||||||||||    
T  39521505 aacataaatataaataatattgacgattaagagagtggtcattaatcaattacatacgcaatatatacaaaaaagagca 39521427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26973455 - 26973398
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacata 58  Q
    |||||||||||||||||||||||||||||||| ||| |||  |||| |||||||||||    
T  26973455 tcaacataaatataaataatattgacgattaagagagtgacaattactcaattacata 26973398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 4292003 - 4291948
Alignment:
Q  87 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||||||||||| ||||| |||||| |||||| |||| |||||| |||||||    
T  4292003 aatgctatactatatccaaaaggaacattgttaatgttatactatatcgatccaaa 4291948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 11830629 - 11830537
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||| ||||| | | || | ||| |||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  11830629 aacataaatataaataatattgacaattaagatagtggtcattggtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 11830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21251881 - 21251740
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| |||||||| |||| | | ||||||||||||    
T  21251881 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcgcaaaaagaacaccatcagtgctatactata 21251782  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| |||||| |||| |||||| |||||||    
T  21251781 tccaaaaggaacattgttaatgctatactatatcgatccaaa 21251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 26692036 - 26691895
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| | |||| |||||||||    
T  26692036 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatcaatgttatactata 26691937  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || |||| | |||| |||||||    
T  26691936 tccaaaaggaacattgttagtgttatactctatcgatccaaa 26691895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 26961768 - 26961627
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| | |||| |||||||||    
T  26961768 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccatcaatgttatactata 26961669  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || |||| | |||| |||||||    
T  26961668 tccaaaaggaacattgttagtgttatactctatcgatccaaa 26961627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 3934510 - 3934649
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatc 102  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| |||||||| || | ||| || |||||||||||    
T  3934510 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagatcatcataagtgttatactatatc 3934609  T
Q  103 aaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
     |||||||||||| ||| || ||||||||||| |||||||    
T  3934610 caaaagaaacattgttagtgttatattatatcgatccaaa 3934649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7629443 - 7629302
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| | |||||||||||||||||| | | | ||||||||||||    
T  7629443 tcaacataaatataaataatattggcgattaagagagtgatgattagtcaatgacatacacaatatatcccaaaaagagcatcattagtgctatactata 7629344  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||| ||||| ||| || |||| |||||| |||||||    
T  7629343 tccaaaagatacattgttagtgctatactatatcgatccaaa 7629302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25750003 - 25749862
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||| ||||||||||||| ||| ||||| ||||||    
T  25750003 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcaccataagtgctacactata 25749904  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || ||||||| ||| |||||||    
T  25749903 tccaaaatgaacattgttagtgctatattacatcgatccaaa 25749862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 26716670 - 26716529
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| ||  || |||||||||    
T  26716670 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataggtgttatactata 26716571  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  26716570 tccaaaatgaacattgttagtgctatactatatcgatccaaa 26716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 26986410 - 26986269
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| ||  || |||||||||    
T  26986410 tcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccataggtgttatactata 26986311  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||| |||||||    
T  26986310 tccaaaatgaacattgttagtgctatactatatcgatccaaa 26986269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1795791 - 1795649
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatccca-aaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| | | ||||||||| |||| |||||| ||| || ||||||||    
T  1795791 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatcccaaaaaaaagcaccataagtgttatactat 1795692  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||| |||||||||||| ||| || |||| |||||| |||||||    
T  1795691 atccaaaagaaacattgttagtgctatactatatcgatccaaa 1795649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39796665 - 39796779
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| | | |||||||||||||||||||| | |||| |||||||||    
T  39796665 tcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatacaatatatcccaaaaagagcaccatcaatgttatactata 39796764  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  39796765 tctaaaaggaacatt 39796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3701482 - 3701342
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || | ||||| |||||||||||||| | | ||||||||||||    
T  3701482 tcaacataaatataaaaaatattgacgattaagagagtgatgattagtcaattacatgcacaatatat-ccaaaaagagcaccatcagtgctatactata 3701384  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||||| ||| || |||| |||||| |||||||    
T  3701383 tccaaaaggaacattgttagtgttatactatatcgatccaaa 3701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 27938556 - 27938415
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| | |||||||||||||||||||| ||  ||||||||||||    
T  27938556 tcaacataaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatcccaaaaagagcaccatacgtgctatactata 27938457  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||| | ||| || || | |||||| |||||||    
T  27938456 tccaaaaggaacactgttagtgctacactatatcgatccaaa 27938415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 17137962 - 17138094
Alignment:
Q  9 aatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaag 108  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || ||||| | |||||||| ||||||||||| | ||||||||| |||||  |||||    
T  17137962 aatataaataatattgacgattaagagagtgatgattagtcaaatatatacacaatatatccc-aaaagagcaccatcaatgctatattatatgcaaaag 17138060  T
Q  109 aaacattattaatggtatattatatcaatccaaa 142  Q
     |||||| ||| || |||||||||||||||||||    
T  17138061 gaacattgttagtgctatattatatcaatccaaa 17138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 43357481 - 43357613
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatccc-aaaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||  |||||||||||||||| |||||||| ||||| |||||| ||| | |||||||||    
T  43357481 tcaacataaatataaataatattgacgattaagagagtgacgat--gtcaattacatacataatatatcccaaaaaaaagcaccataagtactatactat 43357578  T
Q  100 atcaaaaagaaacattattaatggtatattatatc 134  Q
    ||| |||||||||||| ||| || |||| ||||||    
T  43357579 atccaaaagaaacattgttagtgctatactatatc 43357613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14836730 - 14836588
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaa-aaagagcaccctaaatgctatactat 99  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| | |||||| ||| ||| |||||| ||| || ||||||||    
T  14836730 tcaacataaatataaataatattgacggttaagagagtgacgattagtcaattacatacaaaatatatctcaataaaaagcaccataagtgttatactat 14836631  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||| ||||||||| || ||| || |||| |||||| |||||||    
T  14836630 atccaaaagaaactttgttagtgatatactatatcgatccaaa 14836588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 15066598 - 15066469
Alignment:
Q  13 taaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaac 112  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| | |||||||||||||||||||| | | ||||||||||||||  |||| |||    
T  15066598 taaataatattgacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatccgaaaggaac 15066499  T
Q  113 attattaatggtatattatatcaatccaaa 142  Q
    ||| ||| || |||| |||||  |||||||    
T  15066498 attgttagtgttatactatattgatccaaa 15066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 6242729 - 6242861
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||| ||||||| |||||| |   ||||||||||||    
T  6242729 tcaacattaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatataccaaaaaaagcaccatcggtgctatactata 6242828  T
Q  101 tcaaaaagaaacattattaatggtatattatat 133  Q
    || ||||  |||||| ||| || |||| |||||    
T  6242829 tccaaaaagaacattgttagtgttatactatat 6242861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1921180 - 1921038
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||| || | |||||||||||||||||| | | | || |||||||||    
T  1921180 tcaacataaatataaataatattgacgattaagagagtgatgattagtatattacatgcaaaatatatcccaaaaagagcatcatcagtgatatactata 1921081  T
Q  101 tcaaaaagaaacattattaatggt-atattatatcaatccaaa 142  Q
    || ||||| | |||| ||| || | |||||||||| |||||||    
T  1921080 tccaaaaggatcattgttagtgttaatattatatcgatccaaa 1921038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30777109 - 30777219
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | | || |||||||||    
T  30777109 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactata 30777208  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  30777209 ttcaaaaagaa 30777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42365822 - 42365904
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || || | ||||||||||||||||||||    
T  42365822 tcaacataaatataaataatattgacgattaacagagtgatgattagtcaattagatgcacaatatatcccaaaaagagcacc 42365904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 5722395 - 5722282
Alignment:
Q  2 caacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatat 101  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||| |||||||||| | ||||| |||||||||||| | | | ||||||| |||||    
T  5722395 caacataaatataaattatactgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattatat 5722296  T
Q  102 caaaaagaaacatt 115  Q
    | |||| |||||||    
T  5722295 ccaaaataaacatt 5722282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5612172 - 5612275
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||| |||||| ||   | | ||||||||||||    
T  5612172 tcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatactata 5612271  T
Q  101 tcaa 104  Q
    ||||    
T  5612272 tcaa 5612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 11907699 - 11907569
Alignment:
Q  12 ataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaa 111  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| | | || ||||||||||| |||||  |    
T  11907699 ataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgttatactatatccaaaaggta 11907600  T
Q  112 cattattaatggtatattatatcaatccaaa 142  Q
    |||| ||  || |||| |||||| |||||||    
T  11907599 cattgttggtgttataatatatcgatccaaa 11907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 34032754 - 34032668
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatc 102  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||||||||||| | | ||||||||||||||    
T  34032754 ataatattgacgattaagagagtgatgattaatcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatc 34032668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18001677 - 18001778
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||||   | |||||||||||||||||||| | | ||||||||||||    
T  18001677 tcaacataaatataaataatattgacaagtaagagagtgatgattaatcaattacatatccaatatatcccaaaaagagcaccatcagtgctatactata 18001776  T
Q  101 tc 102  Q
    ||    
T  18001777 tc 18001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 39689906 - 39689986
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||| | ||||| ||||||||||||||    
T  39689906 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 39689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 10657388 - 10657308
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  10657388 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 10657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 27085762 - 27085627
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaa 105  Q
    |||| ||||||||||||||| |||||| | | |||| |||||||||||||||||| | ||||| ||||||||||||||   | |||||||||||||  ||    
T  27085762 ataattataaataatattgatgattaagaaagtgataattagtcaattacatacacaatatat-ccaaaaagagcaccacgagtgctatactatattcaa 27085664  T
Q  106 aagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||  |||||| ||| || ||||||||||| |||||||    
T  27085663 aatgaacattgttagtgctatattatatcgatccaaa 27085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41233714 - 41233634
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |   ||||| ||||||||||||    
T  41233714 tcaacataaatataaataatattgacgattaagagcgtgatgattagtcaattacatatacgatatataccaaaaagagca 41233634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 5985653 - 5985731
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||    
T  5985653 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 5985731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9654147 - 9654065
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||| ||||||| || ||||| | |||||||||||||||||| |||||| | |||||| |||||||||||||    
T  9654147 tcaacataaatataagtaatattaacaattaagaaaatgatgattagtcaattgcatacacaatatatcacaaaaagagcacc 9654065  T

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Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 30919087 - 30919009
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  30919087 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 30919009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30284299 - 30284352
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaatta 54  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  30284299 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaatta 30284352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9728109 - 9728168
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  9728109 tcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacgtaca 9728168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22738250 - 22738170
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatga---ttagtcaattacatacatattatatcccaaaaaga 78  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||   ||||||| ||||||||| | |||||||||||||||    
T  22738250 tcaacataaatataaataatattaacgattaagagagtgatgatatttagtcagttacatacacaatatatcccaaaaaga 22738170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 26794177 - 26794255
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  26794177 aacataaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 26794255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 9793226 - 9793159
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  9793226 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 9793159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35746115 - 35746162
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagt 48  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  35746115 tcaacataaatataaataatattgacaattaagagagtgatgattagt 35746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1638968 - 1639022
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    ||||||||||||||||||||||||||||  |||| || | |||||||||||||||||    
T  1638968 aacataaatataaataatattgacgatt--aagagtggtcattagtcaattacatac 1639022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11694511 - 11694466
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgatta 46  Q
    ||||||||| ||||||||||||| |||||||| ||| |||||||||    
T  11694511 tcaacataagtataaataatattcacgattaagagagtgatgatta 11694466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 25701182 - 25701049
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||||| | | ||||||||||||    
T  25701182 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacaaacacaatatatcccaaaaagagcaccgtcagtgctatactata 25701083  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||| |||||| ||| || |||| ||||||    
T  25701082 tccaaaaggaacattgttagtgttatactatatc 25701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7899418 - 7899560
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | |||||||||||||||||||| | | || ||||||| |    
T  7899418 tcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcaccatcagtgttatactaca 7899517  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaac 143  Q
    || ||||||||||||  || || |||| |||||| ||||||||    
T  7899518 tccaaaagaaacattgctagtgctatactatatcgatccaaac 7899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 19878802 - 19878942
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||| ||||||||||||||   | ||||||| ||||    
T  19878802 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaagagcaccaccagtgctataatata 19878900  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| || ||| ||| || ||||||||||| |||||||    
T  19878901 tccaaaaggaatattgttagtgatatattatatcgatccaaa 19878942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 25322219 - 25322330
Alignment:
Q  4 acataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||  | |||| |||||||||||     
T  25322219 acataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcactatcaatgttatactatatcc 25322318  T
Q  104 aaaagaaacatt 115  Q
    ||||| ||||||    
T  25322319 aaaaggaacatt 25322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20509855 - 20509996
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||| | |||||||||||| ||||||| | |||| |||||||||    
T  20509855 tcaacataaatataaataatagtgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaggagcaccatcaatgatatactata 20509954  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| ||| || |||||||    
T  20509955 tccaaaatgaacattgttagtgttatactatgtcgatccaaa 20509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 52684746 - 52684613
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||| |||||||||||||| |   || |||||||||    
T  52684746 tcaacataaatataaataatattgacgattaaaagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgttatactata 52684647  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||| ||||||    
T  52684646 tccaaaaagaacattgttagtgttatactatatc 52684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 35390288 - 35390141
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc--------ctaaatgctat 94  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||| ||||||||||||||         | |||| |||    
T  35390288 aacataaatataaataatattgacgattaagagaatgatgattagtcaattacatacgtaaaatataccaaaaagagcaccagtgtcatatcaatgttat 35390189  T
Q  95 actatatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||||| ||||| |||||| |||||| |||| |||||| |||||||    
T  35390188 actatatccaaaaggaacattgttaatgttatactatatcgatccaaa 35390141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 212913 - 212812
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||| ||||||||||| | | | ||||||||||||    
T  212913 tcaacgtaaatataaataatattgacgattaagagagtgattattagtcaattacatacataatatatctcaaaaagagcaacatgagtgctatactata 212814  T
Q  101 tc 102  Q
    ||    
T  212813 tc 212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 21006062 - 21006195
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| |   ||||||||||||    
T  21006062 tcaacatgaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactata 21006161  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||| ||||||    
T  21006162 tccaaaaagaacattgttagtgttatactatatc 21006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22289443 - 22289583
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||  | ||||||||||||| | |||| ||| || |||||||||    
T  22289443 tcaacgtaaatataaataatattgacgattaatagagtgatgattattcaattacataccgaatatatcccaaaaa-aacaccataagtgttatactata 22289541  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || |||||||||||| ||| || | || |||||| |||||||    
T  22289542 tccaaaagaaacattgttagtgttgtactatatcgatccaaa 22289583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 45057000 - 45057141
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||  || ||||| ||| ||||||||||||||||||||||| | ||||||| ||||||||||||   | ||||||||||||    
T  45057000 tcaacataaatataaataatatcaacaattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcaccagcagtgctatactata 45057099  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |  |||||||||||| ||| || | || |||||| |||||||    
T  45057100 tacaaaagaaacattgttagtgttgtactatatcgatccaaa 45057141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 47642425 - 47642292
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||| | |||||| ||||||||||| | | |||| |||||||||    
T  47642425 tcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcacaaaaagagcatcatcaatgttatactata 47642326  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||| ||||||    
T  47642325 tccaaaaagaacattgttagtgttatactatatc 47642292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2566968 - 2567050
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| ||||||||||||||    
T  2566968 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacc 2567050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13352894 - 13353008
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||| | ||||||| ||||| | |||| | |||| |||||||||    
T  13352894 tcaacatagatataaataatattgaggattaaaagtatgataattagtcaattacatacacaatatatcctaaaaacaacaccattaatgatatactata 13352993  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  13352994 tccaaaaggaacatt 13353008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28968930 - 28968797
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||| ||||||||||||||||||||| ||||| ||| |||| ||||  |||||||||||| | |||||||||||||||||| | | |||| |||||||||    
T  28968930 tcaatataaatataaataatattgacaattaatagagtgattattaaccaattacatacacaatatatcccaaaaagagcatcatcaatgttatactata 28968831  T
Q  101 tcaaaaagaaacattattaatggtatattatatc 134  Q
    || ||||  |||||| ||| || |||||||||||    
T  28968830 tccaaaatgaacattgttagtgttatattatatc 28968797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38888796 - 38888893
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatacta 98  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| | |||||| ||||||||||| | | |||| |||||||    
T  38888796 tcaacataaatataaataatattgacgattaagacagtgatgattagtcaattacatacacaatatatctcaaaaagagcatcatcaatgttatacta 38888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21157459 - 21157562
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||| |||||| ||   | | ||||||||||||    
T  21157459 tcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatactata 21157558  T
Q  101 tcaa 104  Q
    ||||    
T  21157559 tcaa 21157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2123106 - 2122996
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| | || | |||||||||||||||||| | ||| || |||| ||||    
T  2123106 tcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcccaaaaagagcatcataagtgttatattata 2123007  T
Q  101 tcaaaaagaaa 111  Q
    || ||||||||    
T  2123006 tccaaaagaaa 2122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13748219 - 13748291
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaa 73  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||    
T  13748219 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 13748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 22311271 - 22311191
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |  |||| ||||||||||||||    
T  22311271 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaagatataccaaaaagagcacc 22311191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 983589 - 983482
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||| |||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| | ||||||  |||||||||||| | | |||||||||||     
T  983589 tcaacgtaaatataaataatattgacgaataagagagtgatgattaatcaattacatacacaatatatcataaaaagagcaccatcagtgctatactatg 983490  T
Q  101 tcaaaaag 108  Q
    || |||||    
T  983489 tccaaaag 983482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 48123767 - 48123674
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  48123767 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 48123674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 28882256 - 28882336
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  28882256 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 28882336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30787285 - 30787344
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  30787285 tcaacataaatataaataatattaacgattaagagagtgatgattagtcaattacataca 30787344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 29916190 - 29916056
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatg-attagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||||||| |||| || ||| ||||| ||||||| |||||||| | | ||||||||||||||| |||| | | || ||||||||    
T  29916190 tcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatactat 29916091  T
Q  100 atcaaaaagaaacattattaatggtatattatatc 134  Q
    ||| ||||  |||||| ||| || |||| ||||||    
T  29916090 atccaaaatgaacattgttagtgttatactatatc 29916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 29965343 - 29965209
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatg-attagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||||||| |||| || ||| ||||| ||||||| |||||||| | | ||||||||||||||| |||| | | || ||||||||    
T  29965343 tcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatactat 29965244  T
Q  100 atcaaaaagaaacattattaatggtatattatatc 134  Q
    ||| ||||  |||||| ||| || |||| ||||||    
T  29965243 atccaaaatgaacattgttagtgttatactatatc 29965209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 42464316 - 42464394
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  42464316 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 42464394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 25936254 - 25936347
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||| ||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | ||||||||    
T  25936254 aacataaatataaacaatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccattagtgctatac 25936347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 48333359 - 48333218
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||| ||||||||||| ||||| ||| ||| | | |||||| |||||||| | |||||||| |||||| |||| | | || |||||||||    
T  48333359 tcaacataaatatatataatattgacaattaagagagtgacggtcagtcaactacatacacaatatatcccgaaaagaacaccatcagtgttatactata 48333260  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| || ||| ||| || |||| |||||| |||||||    
T  48333259 tccaaaaggaatattgttagtgctatactatatcgatccaaa 48333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 50286923 - 50287003
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  50286923 aacataaatataaataatattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 50287003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 33241275 - 33241220
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacata 58  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  33241275 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 33241220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45347971 - 45347916
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattaca 56  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  45347971 tcaacataaatataaataatattgacgattaagagagtgacgattagtcaattaca 45347916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 10224335 - 10224413
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  10224335 aacataaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 10224413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 52505002 - 52505092
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| | |||||||||||| | | ||||||||    
T  52505002 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatactaaaaagagcaccattagtgctatac 52505092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 19421826 - 19421741
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatat 101  Q
    |||| ||||| | |||| ||| ||||||||||||||||||||||| | |||||||||||||||||||| | | ||||||| |||||    
T  19421826 ataaaattgatgcttaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccattagtgctatattatat 19421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28548443 - 28548363
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    |||||||||||||||||||||||  ||||||| ||| |||| |||||||||||||||| | | |||| | |||||||||||    
T  28548443 tcaacataaatataaataatattaccgattaagagagtgataattagtcaattacatatacactataactcaaaaagagca 28548363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47750632 - 47750739
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatatta-tatcccaaaaagagcaccctaaatgctatactat 99  Q
    ||||||||||||||| ||||||||| |||||| ||| ||||||||| ||||||||||| | | || |||||| ||||||||||| | |||  ||||||||    
T  47750632 tcaacataaatataagtaatattgaagattaagagagtgatgattaatcaattacatatacaatattatccc-aaaagagcaccatcaatattatactat 47750730  T
Q  100 atcaaaaag 108  Q
    ||| |||||    
T  47750731 atccaaaag 47750739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19349320 - 19349379
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    ||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||||    
T  19349320 tcaacataaatataaattatattgacgattaagagagcgacgattagtcaattacataca 19349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41741866 - 41741913
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagt 48  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  41741866 tcaacataaatataaataatattgacgattaagagagtgatgattagt 41741913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 45532239 - 45532331
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    |||||||||||||||||||||||||||||| ||  || | |||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  45532239 aacataaatataaataatattgacgattaagagggtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 45532331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 22610453 - 22610509
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||| | ||| || | |||||||||||||||||    
T  22610453 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacatac 22610509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39664815 - 39664671
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcc----caaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||| |||||| ||| ||| |||| |||||||| ||| | | |||||||     ||||| |  ||| ||| ||||||||    
T  39664815 tcaacataaatataaataatattgatgattaagagagtgacgatttgtcaattatata-acaatatatccaaaaaaaaaaaaataccataagtgctatac 39664717  T
Q  97 tatatcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    |||||| |||||||||||| | | || |||| ||||||||| ||||    
T  39664716 tatatccaaaagaaacattgtcagtgttatactatatcaatacaaa 39664671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 52121705 - 52121649
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||| |||| |||||||| ||| || |||||||||||||||||||    
T  52121705 aacataaatataaatattatttacgattaagagagtggtgattagtcaattacatac 52121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 1678869 - 1678936
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||||    
T  1678869 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 1678936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 1528959 - 1528892
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||| | ||||| ||||||||||||||    
T  1528959 ataatattgacgattaagagagtggtcattaggtaattacatacacaatatataccaaaaagagcacc 1528892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 28705670 - 28705590
Alignment:
Q  16 ataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||| ||| || | ||||| ||||||||||   | ||||| |||||||||||||| | |||| |||||    
T  28705670 ataatattgacgattaagagagtggtcattagacaattacatatgcaatatataccaaaaagagcaccatcaatgttatac 28705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6707739 - 6707880
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| | || ||||||||| ||||||| | ||||||||||||||    
T  6707739 tcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatacatcccaaaaggagcaccatcaatgctatactata 6707838  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| |||||  |||||||    
T  6707839 tccaaaatgaacattgttagtgttatactatattgatccaaa 6707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 32018515 - 32018378
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||||| |   ||||||||||||    
T  32018515 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatactata 32018416  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    || ||||  |||||| ||| || |||| ||||||||||    
T  32018415 tccaaaaagaacattgttagtgttatactatatcaatc 32018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 10894221 - 10894359
Alignment:
Q  5 cataaatataaa-taatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatca 103  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| | |||||| |||||||| |||| | | ||||||||||||||     
T  10894221 cataaatataaaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagaacaccatcagtgctatactatatcc 10894320  T
Q  104 aaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||||| |||||| ||| || |||| |||||| |||||||    
T  10894321 aaaaggaacattgttagtgctatactatatcgatccaaa 10894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19128551 - 19128409
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcc-caaaaagagcaccctaaatgctatactat 99  Q
    |||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||| | |||||||  ||||| |||||| ||| || ||||||||    
T  19128551 tcaacataaatataaataatgttgacgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcaccataagtgttatactat 19128452  T
Q  100 atcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    ||| |||||||||||| ||| || |||| |||||| |||||||    
T  19128451 atccaaaagaaacattgttagtgctatactatatcgatccaaa 19128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11105706 - 11105565
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || | ||||| |||||||||||||| |||||||||||||||||||| | | || |||  ||||    
T  11105706 tcaacataaatataaataatattgacgattaagagagtggttattagccaattacatacataatatatcccaaaaagagcaccatcagtgttattttata 11105607  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||  |||||| ||| || |||| ||||||||||||||    
T  11105606 tccaaaatgaacattgttagtgttatactatatcaatccaaa 11105565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27084371 - 27084257
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||| | |||||||||||||||||| | ||| || |||||||||    
T  27084371 tcaacataaatataaataatattgacaattaagagagtgatggttagtcaattacatacacaatatatcccaaaaagagcatcataagtgttatactata 27084272  T
Q  101 tcaaaaagaaacatt 115  Q
    ||  |||| ||||||    
T  27084271 tccgaaaggaacatt 27084257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13045081 - 13045221
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| | ||||||| ||||| |||||| | | ||| ||||||||    
T  13045081 tcaacataaatataaataatattgacgattaagagagtgatgattagccaattacatacacaatatatcctaaaaa-agcaccatcagtgcaatactata 13045179  T
Q  101 tcaaaaagaaacattattaatggtatattatatcaatccaaa 142  Q
    || ||||| || ||  ||| || |||| ||||||||||||||    
T  13045180 tccaaaaggaagatcgttagtgttatactatatcaatccaaa 13045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13061074 - 13061149
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaa 76  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  13061074 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaa 13061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3212988 - 3212878
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||| |||||||||||| | | | || |||||||||    
T  3212988 tcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgatatactata 3212889  T
Q  101 -tcaaaaagaa 110  Q
     ||||||||||    
T  3212888 ttcaaaaagaa 3212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3299456 - 3299342
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| ||||||||||| ||| |||||||| ||| | ||||||||||||||||||||| | |||||||||||||||||||| | | ||||||| ||||    
T  3299456 tcaacatgaatataaataacattaacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcaccatcagtgctataatata 3299357  T
Q  101 tcaaaaagaaacatt 115  Q
    || ||||| ||||||    
T  3299356 tccaaaaggaacatt 3299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7255337 - 7255199
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |     ||||||||| |||||||||  | | ||||||||||||    
T  7255337 tcaacattaatataaataatattgacgattaagagagtgatgattagtcaattacacaa----tatatcccacaaagagcacaatcagtgctatactata 7255242  T
Q  101 tcaaaaagaaaca-ttattaatggtatattatatcaatccaaa 142  Q
    || ||||| |||| || |||||| |||| |||||| |||||||    
T  7255241 tccaaaaggaacatttgttaatgttatactatatcgatccaaa 7255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 7187957 - 7188047
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||| | ||||| |||||||||||||| | | ||||||||    
T  7187957 ataaatataaataatattgacgattaagagagtgatcattagttaattacatacacaatatataccaaaaagagcaccatcagtgctatac 7188047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 32130235 - 32130315
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc 83  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||  |  |||| ||||||||||||||    
T  32130235 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32130315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 234712 - 234653
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  234712 tcaacataaatataaataatattgacgattaagagagtgatgattagtcaactacataca 234653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 13607489 - 13607557
Alignment:
Q  10 atataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaaga 78  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||| | |||||||||||||||    
T  13607489 atataaacaatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaga 13607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26327714 - 26327608
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    ||||||| ||||||||||||  |||||||||| ||| ||||||||||||| ||||||| | | |||||| ||||||||||||  | | || |||||||||    
T  26327714 tcaacattaatataaataattatgacgattaagagagtgatgattagtcagttacatagacaatatatctcaaaaagagcacaattagtgttatactata 26327615  T
Q  101 tcaaaaa 107  Q
    || ||||    
T  26327614 tctaaaa 26327608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8357822 - 8357766
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatac 59  Q
    |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||    
T  8357822 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatac 8357766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4153261 - 4153320
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| | |||||||| ||||    
T  4153261 tcaacataaatataaataatattaacgattaagagagtgatgatcactcaattacttaca 4153320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 22988838 - 22988966
Alignment:
Q  11 tataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 110  Q
    ||||| ||||||||||||||||  || |||||||||||||   | ||||| | |||||||||||| || |||| | | || |||||| |||| ||||| |    
T  22988838 tataagtaatattgacgattaagcgagtgatgattagtca---aaatacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 22988934  T
Q  111 acattattaatggtatattatatcaatccaaa 142  Q
    ||||| ||| || |||| |||||| |||||||    
T  22988935 acattgttagtgctatactatatcgatccaaa 22988966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 23799558 - 23799430
Alignment:
Q  11 tataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 110  Q
    ||||| ||||||||||||||||  || |||||||||||||   | ||||| | |||||||||||| || |||| | | || |||||| |||| ||||| |    
T  23799558 tataagtaatattgacgattaagcgagtgatgattagtca---aaatacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 23799462  T
Q  111 acattattaatggtatattatatcaatccaaa 142  Q
    ||||| ||| || |||| |||||| |||||||    
T  23799461 acattgttagtgctatactatatcgatccaaa 23799430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 202482 - 202607
Alignment:
Q  1 tcaacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactata 100  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || | |||||| |||  ||||    
T  202482 tcaacataaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatcataaatgttatgttata 202574  T
Q  101 tcaaaaagaaacattattaatggtatattatat 133  Q
    || |||||||| ||| ||| || ||||||||||    
T  202575 tccaaaagaaatattgttagtgctatattatat 202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 43784 - 43874
Alignment:
Q  6 ataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatac 96  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||||||||  | |||||  ||||||||||||| | | ||||||||    
T  43784 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatcagtgctatac 43874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 6070 - 5926
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcacc-----------ctaaatgc 91  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |  | || ||||||||||||||            | |||||    
T  6070 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacaca--aaataccaaaaagagcaccatcggtgttatatcaatgc 5973  T
Q  92 tatactatatcaaaaagaaacattattaatggtatattatatcaatc 138  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||||||    
T  5972 tatactatatcaaaaaggaacattgttaatgttatactatatcaatc 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 29820 - 29898
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagca 81  Q
    ||||||||||||||||||||| |||||||| ||| || | |||||||||||||||||  | ||||| ||||||||||||    
T  29820 aacataaatataaataatattaacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 29898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 13794 - 13690
Alignment:
Q  3 aacataaatataaataatattgacgattaaaagaatgatgattagtcaattacatacatattatatcccaaaaagagcaccctaaatgctatactatatc 102  Q
    ||||| ||||||||||||  |||||||||| ||| ||||||||||||||| ||||||| | |||||  ||||||||||||  | | || |||||||||||    
T  13794 aacattaatataaataattatgacgattaagagagtgatgattagtcaatgacatacacaatatatatcaaaaagagcacaattagtgttatactatatc 13695  T
Q  103 aaaaa 107  Q
     ||||    
T  13694 taaaa 13690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 41276 - 41331
Alignment:
Q  5 cataaatataaataatattgacgattaaaagaatgatgattagtcaattacataca 60  Q
    ||||||||||||||||||| |||||||| ||| || | ||||||||||||||||||    
T  41276 cataaatataaataatattaacgattaagagagtggtcattagtcaattacataca 41331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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