View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11594_low_10 (Length: 357)
Name: NF11594_low_10
Description: NF11594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11594_low_10 |
 |  |
|
| [»] scaffold0062 (2 HSPs) |
 |  |  |
|
| [»] scaffold0214 (3 HSPs) |
 |  |  |
|
| [»] scaffold0175 (1 HSPs) |
 |  |  |
|
| [»] scaffold0067 (1 HSPs) |
 |  |  |
|
| [»] scaffold0012 (2 HSPs) |
 |  |  |
|
| [»] scaffold0360 (2 HSPs) |
 |  |  |
|
| [»] scaffold0134 (1 HSPs) |
 |  |  |
|
| [»] scaffold0043 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
| [»] scaffold0401 (1 HSPs) |
 |  |  |
|
| [»] scaffold1048 (1 HSPs) |
 |  |  |
|
| [»] scaffold0911 (1 HSPs) |
 |  |  |
|
| [»] scaffold0083 (2 HSPs) |
 |  |  |
|
| [»] scaffold0637 (1 HSPs) |
 |  |  |
|
| [»] scaffold0080 (1 HSPs) |
 |  |  |
|
| [»] scaffold0381 (1 HSPs) |
 |  |  |
|
| [»] scaffold0035 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 22257176 - 22256827
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22257176 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
22257077 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22257076 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacgttaataataaagagagtatcaactacattcatat |
22256977 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaat-aaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgt |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
22256976 |
attacaataggttcatcatggctcaatcaaaggaaattaactagacatgattaaataaaaaaaacaacataataaagaaaataaaccgatagagtttcgt |
22256877 |
T |
 |
| Q |
300 |
cgatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
352 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22256876 |
cga---cggcgttgctcctcaatcttctttcaatctgtgttgttcttcactct |
22256827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 22232827 - 22233185
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22232827 |
ttgaatcaaacagaattactatttcaggattgaaagctagggttaatagtcatttaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
22232926 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac------at |
194 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || |
|
|
| T |
22232927 |
agtcatacaaaacaattatataaaaagcaatgaacacaagtaattctgaataaagactaaataacattaatagtaaagagagtatcaactacattcatat |
22233026 |
T |
 |
| Q |
195 |
tcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaat-aaagaaacaacatagtnnnnnnnntaaaccgatagag |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||| |
|
|
| T |
22233027 |
tcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaaaaaaacaacataataaaaaaaataaaccgatagag |
22233126 |
T |
 |
| Q |
294 |
tttcgtcgatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
352 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22233127 |
tttcatcgatatcggcgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
22233185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 22253912 - 22253554
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22253912 |
ttgaatcaaacagaattactatttcaggattgaaagctagggttaatagtcatttaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
22253813 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattc---- |
196 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22253812 |
agtcatacaaaacaattatataaaaagcaatgaacacaagtaattctgaataaagactaaataacattaatagtaaagagagtatcaactacattcatat |
22253713 |
T |
 |
| Q |
197 |
--atatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaat-aaagaaacaacatagtnnnnnnnntaaaccgatagag |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||| |
|
|
| T |
22253712 |
tcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaaaaaaacaacataataaaaaaaataaaccgatagag |
22253613 |
T |
 |
| Q |
294 |
tttcgtcgatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
352 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22253612 |
tttcatcgatatcggcgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
22253554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20100562 - 20100331
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20100562 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaatttctaatatcaattcatgtaattgcaagaagctagggttaat |
20100463 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20100462 |
agtcatacaaagcaattatat-aaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
20100364 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
20100363 |
atattacaataggttcatcatggctcaatcaaa |
20100331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 748241 - 748471
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
748241 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctagggttaaa |
748340 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
748341 |
agtcatacaaagcagtcatataaaaaacaatgaacacaagtaattctgaataaagacagaataacattaataataaagagagtatcaactactgattcat |
748440 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
748441 |
atattacaataggttcatcatggctcaatca |
748471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 5826908 - 5827138
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
5826908 |
ttgaatcaaacaggattactatttcaggattaaaagttagggttaacagtcattcaattcataatatcaattcatgtaattgcacgaagctatggttaat |
5827007 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5827008 |
agtcatacaaagcaattatttgaaaa-caatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
5827106 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
5827107 |
atattacaataggttcatcatggcttaatcaa |
5827138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 11825555 - 11825828
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| | |||||||||||| ||||||| ||||||| |
|
|
| T |
11825555 |
ttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctgatatcgagacatgtaattgcacgaagctagggttaat |
11825654 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||| ||| ||||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11825655 |
agtcatataaaacaattatgtgaaaagtaatgaacacaagtaattctgaataaagattgaataacattaataataaagagagtatcaactactgattcat |
11825754 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
11825755 |
atattacaataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacata |
11825828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 2349368 - 2349164
Alignment:
| Q |
24 |
tcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataa |
123 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |
|
|
| T |
2349368 |
tcaggattaaaagctagggttaatagtcattcaatttctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaaca---atataa |
2349272 |
T |
 |
| Q |
124 |
aaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatgg |
221 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| |
|
|
| T |
2349271 |
aaagaaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgatttacatattacaataggtttatcatgg |
2349172 |
T |
 |
| Q |
222 |
ctcaatca |
229 |
Q |
| |
|
|||||||| |
|
|
| T |
2349171 |
ctcaatca |
2349164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 8397763 - 8397504
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
8397763 |
ttgaatcaaacatgattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
8397664 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
| ||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |
|
|
| T |
8397663 |
aatcatacaaaacaattatctgaaaaacaatgaacacaagtaattctgaataaagactgaataacattaataatttactg------------attcatat |
8397576 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
8397575 |
attacaataggttcatcatgacttaatcaacaaggaaattagctagacatgatcaaaggaataaacaacata |
8397504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26460384 - 26460157
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
26460384 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
26460286 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
26460285 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
26460187 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
26460186 |
atattacaa-cggttcatcatggctcaatca |
26460157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23598963 - 23599189
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
23598963 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctatggttaat |
23599061 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| || ||||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
23599062 |
agtcatac-aagcaattatat-gaaggcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
23599159 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
23599160 |
atattacaa-aggttcatcatggctcaatca |
23599189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 26182220 - 26182014
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
26182220 |
ttgaatcaaacaaaattactaattcaggattaaaagctagggttaatagtcattcaattcttaatatcaattcatataatt-caagaagctagggttaat |
26182122 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
26182121 |
agtcatacaa-gcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
26182023 |
T |
 |
| Q |
199 |
atattacaa |
207 |
Q |
| |
|
||||||||| |
|
|
| T |
26182022 |
atattacaa |
26182014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 710217 - 710444
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| |
|
|
| T |
710217 |
ttgaatcaaacagaattactaattcaggattaaaatctagggttagtagtcattcaattcctaatatcaattcatataaattcaagaagctagggttaat |
710316 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
710317 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
710414 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
710415 |
atattacaa-aggttcatcatggctcaatca |
710444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2251789 - 2251563
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
2251789 |
ttgaatcaaacagaattagtaattcaggattaaaaactagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
2251691 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| |||| ||| |||||||||||||| || | |||| |
|
|
| T |
2251690 |
agtcata-aaagcaattatat-gaaagcaataaacacaagtgattctgaataaaggctgaataatattattaaataagagagtatcaaccactaaatcat |
2251593 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
2251592 |
atattacaa-aggttcatcatggctcaatca |
2251563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3541368 - 3541524
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
3541368 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattgaaagaagctagggttaat |
3541467 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
3541468 |
agtcattcaaa-caatcatacgaaaagcaatgaacacaaataattctgaatgaagact |
3541524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22083643 - 22083798
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||| || ||||||| |
|
|
| T |
22083643 |
ttgaattaaacagaattactatttcaggattaaaagctaga-ttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttaat |
22083741 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
22083742 |
agtcatgcaaa-caatcatataaaaagcaatgaacataaataattctgaataaagact |
22083798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 44017992 - 44018146
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
44017992 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattgaaagaagctagggttagt |
44018091 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaaga |
156 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||| |
|
|
| T |
44018092 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaaga |
44018146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 38431311 - 38431155
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
38431311 |
ttgaattaaacagaattactatttcaggattaaaagctagggttggtagtcattcaatttctaagatcaatttatgtgattgaaagaagctagggttagt |
38431212 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
38431211 |
agtcatacaaa-caatcataagaaaagcagtaagcacaaataattctgaataaagact |
38431155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 12803465 - 12803620
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
12803465 |
ttgaattaaacaaaattactatttcaggattaaaagctagggt-agtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagt |
12803563 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||| ||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
12803564 |
agtcatataaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
12803620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26153069 - 26152913
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
26153069 |
ttgaataaaacagaattactatttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
26152970 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||| |||| ||| ||| ||||||| | | ||||| ||||| |||||||||||| |
|
|
| T |
26152969 |
agtcataaaaag-aatcataaaaaaagcgttaagcacaaataattatgaataaagact |
26152913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 23467442 - 23467558
Alignment:
| Q |
158 |
tgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaa |
255 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
23467442 |
tgaataatattgataataaagagagtttcaactactgattcatatattacaatagattcatcatggctcaatcaaa-ggaattagctagacataattaaa |
23467540 |
T |
 |
| Q |
256 |
taaagaaac-aacatagt |
272 |
Q |
| |
|
||| |||| |||||||| |
|
|
| T |
23467541 |
gaaataaactaacatagt |
23467558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6964205 - 6964049
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
6964205 |
ttgaattaaacaaaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaaggtagggttagt |
6964106 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| |||| || | | ||| | |||||||||||||||||| |
|
|
| T |
6964105 |
agtcatacaaa-caatcataagaaaaacattaagcaccaataattctgaataaagact |
6964049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 43549111 - 43548955
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||| |||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
43549111 |
ttgaattaaacataattactatttcatgattaaaagctagggttagtagtcaatcaattcctaagttcaatttatgtgattgaaagaagctagggttagt |
43549012 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| ||||| |||||||||||| |
|
|
| T |
43549011 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattttgaataaagact |
43548955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 42606060 - 42606142
Alignment:
| Q |
129 |
aatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatatattacaataggtt |
213 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
42606060 |
aatgaacacaa-taattctgaataaagattgaattacattaacaataaagagagtatcaacta-attcatatgttacaataggtt |
42606142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 23467349 - 23467437
Alignment:
| Q |
19 |
ctatttcaggattgaaagctagggttaatagtcattcaa-ttcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcat |
106 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| || ||||||| ||||||| |||| |||| |||||| || ||||||||||||| |
|
|
| T |
23467349 |
ctatttcaggattaaaagctagggttagtagtcattaaatttcctaagatcaatttatgtgattgtaagaagttagggttaatagtcat |
23467437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 8276644 - 8276580
Alignment:
| Q |
281 |
taaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatctgtgttgttctt |
346 |
Q |
| |
|
||||| ||||||||| ||||| || || | |||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
8276644 |
taaactgatagagttccgtcgttgccggc-ttgctcctcaattttctttcaatcggtgttgttctt |
8276580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 11702787 - 11703137
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
11702787 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
11702886 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
11702887 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaattattctgaataaagactgaataatattgataataaagagagtttcaactacattcatat |
11702985 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtc |
300 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |
|
|
| T |
11702986 |
attacaataggtttatcatggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagtaaagaaaataaaccgatagaatttcgtc |
11703085 |
T |
 |
| Q |
301 |
gatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
352 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11703086 |
gatgtcggcgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
11703137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 18859697 - 18859424
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
18859697 |
ttgaatcaaacaggattactatttcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
18859598 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
18859597 |
agtcatacaaatcaattatttgaaaagcaatgaacacaagtaattctgaataaagactgaataattttaataataaagagagtatcaactactaattcat |
18859498 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||| ||| || |||||||||| |
|
|
| T |
18859497 |
atattacaataggttcatcatggcttaatcaacaaggaaattagctaaacatgatcaaacgaataaacaacata |
18859424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3734232 - 3734005
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
3734232 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
3734134 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||| || | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
3734133 |
agttat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
3734035 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
3734034 |
atattacaa-cggttcatcatggctcaatca |
3734005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 49636723 - 49636950
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
49636723 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
49636821 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
49636822 |
agttatac-gagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
49636920 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
49636921 |
atattacaa-cggttcatcatggctcaatca |
49636950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 49640016 - 49640243
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
49640016 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
49640114 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
49640115 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
49640213 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
49640214 |
atattacaa-cggttcatcatggctcaatca |
49640243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3719696 - 3719923
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| |
|
|
| T |
3719696 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataaattcaagaagctagggttaat |
3719795 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
3719796 |
agtcatac-aagcaattatat-gaaatcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
3719893 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
3719894 |
atattacaa-aggttcatcatggctcaatca |
3719923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 14701824 - 14701597
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| |
|
|
| T |
14701824 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaattcatataaattcaagaagctagggttaat |
14701725 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| ||| |||||||||| |||||| | |||| |
|
|
| T |
14701724 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtattaactactaaatcat |
14701627 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
14701626 |
atattacaa-aggttcatcatggctcaatca |
14701597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 17670304 - 17670099
Alignment:
| Q |
33 |
aaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatg |
132 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
17670304 |
aaaggtagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaaacaattatttaaaaagcaatg |
17670205 |
T |
 |
| Q |
133 |
aacacaagta-------------attctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatc |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
17670204 |
aacacaagtaattttgaataaagattctgaataaagactgaataacattaataataaagagagtatcaactactaattcatatattacaatacgttcatc |
17670105 |
T |
 |
| Q |
218 |
atggct |
223 |
Q |
| |
|
|||||| |
|
|
| T |
17670104 |
atggct |
17670099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 10385853 - 10385611
Alignment:
| Q |
17 |
tactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaat |
116 |
Q |
| |
|
|||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||| | ||||||| |
|
|
| T |
10385853 |
tactatatcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aagcaat |
10385755 |
T |
 |
| Q |
117 |
tatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttc |
214 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
10385754 |
catatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactactaattcatat-------------- |
10385669 |
T |
 |
| Q |
215 |
atcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| |||| ||| |||||||||||| |
|
|
| T |
10385668 |
atcatggctcaatcaaagagaattaactagacatgaataaagaaacaaacaacatagt |
10385611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 10247739 - 10247452
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
10247739 |
ttgaattaaacagaattattatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagttagggttaat |
10247640 |
T |
 |
| Q |
101 |
agtcatacaaag-----------------caattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagt |
183 |
Q |
| |
|
|||||| |||| |||| |||| ||| |||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||| |
|
|
| T |
10247639 |
agtcatgcaaacaatgcaaacaatgcaaacaatcatatgaaaggcaatgaacacagataattctgaataaagactgaataatattgataataaaaagagt |
10247540 |
T |
 |
| Q |
184 |
atcaactac--attcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| || |||||||||| ||||||| |||||||| |||||| || |||||||||| |
|
|
| T |
10247539 |
tttaactactgattcatatattacaataggttcatcgtgactcaatcaaatggaattaactagacat-attaaaggaataaacaacata |
10247452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 322
Target Start/End: Original strand, 33400546 - 33400840
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
||||||||||||| ||| |||| |||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||| |||||||||||| |||| || |
|
|
| T |
33400546 |
attactatttcagaattaaaagttagggttagtagtcattcaattactaagatcaatttatgtgattgcaagaagctagggttaatagtcaagcaaa-ca |
33400644 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatatattacaataggttc |
214 |
Q |
| |
|
|| |||| ||||||||| |||| || ||||||||||||||||| |||||| ||| |||| |||||||| ||| || ||| ||||||||| |
|
|
| T |
33400645 |
atcatatgaaaagcaattaacataaataattctgaataaagaccgaataatattgataacaaagagag-----------ttccaattttataataggttc |
33400733 |
T |
 |
| Q |
215 |
atcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgc |
314 |
Q |
| |
|
|| |||| |||||||||||||||||| |||||||||||||| || |||||||||||| |||| ||||||| | |||||| | |||||||||| |
|
|
| T |
33400734 |
attatggttcaatcaaagggaattagatagacatgattaaa-gaataaacaacatagtaaagaaaataaatcgatagaatctcgtcgttatcgacgttgc |
33400832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 23653195 - 23652968
Alignment:
| Q |
8 |
aaacaggattactatttcaggattgaaagctagggttaatagtcattcaatt---cctaatatcaattcatgtaattgcaagaagctaaggttaatagtc |
104 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||| |||||| | ||| ||| | ||||||| | | |||| |||||| || | ||||||||| |
|
|
| T |
23653195 |
aaacagaattactatttcaggattaaaagctagggttagtagtcaattaataatacctgagatcaattaacatgattgaaagaagttaggtttaatagtc |
23653096 |
T |
 |
| Q |
105 |
atacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac---attcatata |
201 |
Q |
| |
|
|| |||| |||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||| ||| |
|
|
| T |
23653095 |
atgcaaa-caatcataataaaagcaatgaacacaaataattctgaataaagattgaataacattgataataaagagagt-tcaactacttggttcacata |
23652998 |
T |
 |
| Q |
202 |
ttacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23652997 |
ttacaataggttcatcatggctcaatcaaa |
23652968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 56089514 - 56089670
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||||||||||| | |||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
56089514 |
ttgaattaaacagaattactatttcaagattaaaagctagggttagtggtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttaat |
56089613 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
56089614 |
agtcatgcaaa-caatcatacgaaaagcaatgaacacaaataattctgaataaagact |
56089670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 13979052 - 13978896
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
13979052 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtggtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagt |
13978953 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| | | ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
13978952 |
agtcatacaaa-caatcagaagaaaagcattaagcacaaataattctgaataaagact |
13978896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 11560718 - 11560500
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
|||||||||| |||||| |||| |||||||| |||||| | ||| ||||| |||||| | | | | |||||| || ||||||||||||| |||| || |
|
|
| T |
11560718 |
attactattttaggattaaaagatagggttactagtcaattaatacctaaggtcaattaacatgactaaaagaagttagggttaatagtcatgcaaa-ca |
11560620 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacat---tcatatattacaatagg |
211 |
Q |
| |
|
|| ||| ||||||||||||||||| ||||| |||||||||| || |||||||| |||||||||||||| |||||||| | ||| |||||||||||| |
|
|
| T |
11560619 |
atcataataaaagcaatgaacacaaataattttgaataaagattgtataacattgataataaagagagtttcaactacttggatcacatattacaataga |
11560520 |
T |
 |
| Q |
212 |
ttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
11560519 |
ttcatcatgtctcaatcaaa |
11560500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 15851091 - 15850935
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||| |||| |||| |||||| || ||||| | |
|
|
| T |
15851091 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagataaatttatgtgattgaaagaagttagggttatt |
15850992 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| ||||| |||||||||||| |
|
|
| T |
15850991 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattttgaataaagact |
15850935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26703691 - 26703847
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| || | |||| ||||||||| |||| | |
|
|
| T |
26703691 |
ttgaattaaacataattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatatgattgaaagaagctagagttagt |
26703790 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
26703791 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
26703847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 19928802 - 19928666
Alignment:
| Q |
21 |
atttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattata |
120 |
Q |
| |
|
|||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| |||||||||||| |||| | | |
|
|
| T |
19928802 |
atttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaa-caatcaga |
19928704 |
T |
 |
| Q |
121 |
taaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
19928703 |
agaaaagcattaagcacaaataattctgaataaagact |
19928666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 5670272 - 5670226
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatag |
271 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
5670272 |
aatcaaaggaaattagctagacatgattaaagaaataaacaacatag |
5670226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 33410412 - 33410465
Alignment:
| Q |
281 |
taaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatc |
334 |
Q |
| |
|
||||||||||||||| ||||| | |||||| |||| |||||||||||||||||| |
|
|
| T |
33410412 |
taaaccgatagagttccgtcgttttcgacggtgcttctcaatcttctttcaatc |
33410465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 27013973 - 27013926
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||||||| |
|
|
| T |
27013973 |
aatcaaaggaaattagctagacatgattaaaataataaacaacatagt |
27013926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 5672591 - 5672545
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatag |
271 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
5672591 |
aatcaaagaaaattagctagacatgattaaagaaataaacaacatag |
5672545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 1503633 - 1503982
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
1503633 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
1503732 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
|||||| ||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1503733 |
agtcatgcaa-gcaatcatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactacattcatat |
1503831 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
1503832 |
attacaataggttcatcatggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagt-aagaaaataaatcgatagagtttcgtc |
1503930 |
T |
 |
| Q |
301 |
gatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctctc |
353 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1503931 |
gatgtcggcgttgctcctcaatcttctttcaatctgtgttgtt-ttctctctc |
1503982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 1506837 - 1507177
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
1506837 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
1506936 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
|||||| ||| ||||| |||| |||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1506937 |
agtcatgcaa-gcaatcatatgaaaaacaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactacattcatat |
1507035 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
1507036 |
attacaataggttcatcatggctcaatcaaagagaattagctagacatgattaaataaataaacaacatagt-aagaaaataaaccgatagagtttcgtc |
1507134 |
T |
 |
| Q |
301 |
gatgtcgacgttgctcctcaatcttctttcaatctgtgttgtt |
343 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1507135 |
gatgtcggcgttgctcctcaatcttctttcaatctgtgttgtt |
1507177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 18011869 - 18011637
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18011869 |
ttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
18011770 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
18011769 |
agtcatacaaagcaactatataaaaagcaatgaacacaagtaattataaataaagactgaataacattaataataaagagagtatcaactactgatttat |
18011670 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
18011669 |
atattacaataggttcatcatggctcaatcaaa |
18011637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 13518223 - 13517972
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
13518223 |
ttgaatcaaacaggattactatttcatgattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
13518124 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||| | |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| |||||| |
|
|
| T |
13518123 |
agtcatacaaatcaattatttgaaaagctatgaacacaagtaattttgaataaagactgaataacattaataataaagagaggataaactactgattcat |
13518024 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa-aggg-aattagctagacat |
248 |
Q |
| |
|
||||||||||||||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
13518023 |
atattacaataggttcatcatagcttaatcaagagggaaattagctagacat |
13517972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 11059718 - 11059464
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
11059718 |
ttgaatcaaacaggattactatttcatgattaaaagttagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
11059619 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactga---ataacattaataataaagagagtatcaactac--att |
195 |
Q |
| |
|
||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
11059618 |
agtcatacaaagcaattatctgaaaaacaatgaacacaagtaactctgaataaagactgaataataacattaataataaagagagtatcaactactgatt |
11059519 |
T |
 |
| Q |
196 |
catatattacaataggttcatcatggctcaatcaa-aggg-aattagctagacat |
248 |
Q |
| |
|
||| |||||||||||||||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
11059518 |
catttattacaataggttcatcatggcttaatcaagagggaaattagctagacat |
11059464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 15704170 - 15704493
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||| |
|
|
| T |
15704170 |
ttgaatcaaacactattactatttcaagattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaatttcaggaagttagggttaat |
15704269 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
15704270 |
agtcatac-aagcaattatataaaaa-caatgaacacaaataattctaaataaagactgaataacattaataataaagagagtatcaacttctaattcat |
15704367 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtt |
295 |
Q |
| |
|
||||||||| ||||||||||||||||||| || | | | ||| ||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
15704368 |
atattacaa-aggttcatcatggctcaatgaaactaagaatttaactagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtt |
15704466 |
T |
 |
| Q |
296 |
tcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
|||||| || ||| |||||||||||| |
|
|
| T |
15704467 |
tcgtcgttgatgactttgctcctcaat |
15704493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 29435669 - 29435368
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
29435669 |
ttgaaacaaacaggattactatttcaggattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaatttcaagaagctagggttaat |
29435570 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||| |||||| |
|
|
| T |
29435569 |
agtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaatagcattattaat-aagagaatatcaactactaattcat |
29435473 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtt |
295 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
29435472 |
atattacaa-aggttcatcatggctcaatcaaactaagagtttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtt |
29435374 |
T |
 |
| Q |
296 |
tcgtcg |
301 |
Q |
| |
|
||||| |
|
|
| T |
29435373 |
ccgtcg |
29435368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 38326471 - 38326726
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
38326471 |
ttgaattaaacagaattattatttcaggattaaaagctagggttggtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
38326570 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||| ||||||||||| ||||||||||||||||| |||||| ||| |||||||||| ||| |||||||| |||||| |
|
|
| T |
38326571 |
agtcatgcaaa-caatcatatcaaaagtaatgaacacaaataattctgaataaagacggaataatattgataataaagaaagtttcaactactgattcat |
38326669 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaa |
255 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38326670 |
atattccaataggttcatcatggctcaatcaaagggaattagctagacatgattaaa |
38326726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 38326274 - 38326033
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||| |||| || |
|
|
| T |
38326274 |
attattatttcaggattaaaagctagggttggtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-ca |
38326176 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggt |
212 |
Q |
| |
|
|| |||| ||||| ||||||||||| ||||||||||||||||| |||||| ||| |||||||||| ||| |||||||| ||||||||||| |||||||| |
|
|
| T |
38326175 |
atcatatcaaaagtaatgaacacaaataattctgaataaagacggaataatattgataataaagaaagtttcaactactgattcatatattccaataggt |
38326076 |
T |
 |
| Q |
213 |
tcatcatggctcaatcaaagggaattagctagacatgattaaa |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38326075 |
tcatcatggctcaatcaaagggaattagctagacatgattaaa |
38326033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 47 - 334
Target Start/End: Original strand, 15719470 - 15719759
Alignment:
| Q |
47 |
tagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattc |
146 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||| ||||||| || |||||||||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15719470 |
tagtcattcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcatataa-gcaattatataaaaa-caatgaacacaagtaattc |
15719567 |
T |
 |
| Q |
147 |
tgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaa---agggaattagc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || | | ||| | |
|
|
| T |
15719568 |
tgaataaagactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatggctcaatgaaactaataatttaac |
15719666 |
T |
 |
| Q |
242 |
tagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatc |
334 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||| | |||||| |
|
|
| T |
15719667 |
tagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgatgactttgctcctcaatcttttctcaatc |
15719759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18938813 - 18938586
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
18938813 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
18938715 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
18938714 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
18938616 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
18938615 |
atattacaa-cggttcatcatggctcaatca |
18938586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22592433 - 22592206
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||| ||||||| |
|
|
| T |
22592433 |
ttgaatcaaacagaattactaattcatgattaaaagctagggttaatagtcattcaattcctaatctcaattcatataaattcaagaagctagggttaat |
22592334 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| || |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
22592333 |
agtcatac-aagcaattatat-gaaagcaataaacacatgtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
22592236 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
22592235 |
atattacaa-aggttcatcatggctcaatca |
22592206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 4577770 - 4577498
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
4577770 |
ttgaattaaacagaattactatttcaggattaaaagctagg-ttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagatagggttaat |
4577672 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
|||||| |||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||| |||||||| ||||| ||| ||||| |||| |
|
|
| T |
4577671 |
agtcatgcaaa-caattatatgaaaagcaatgaacacaaataattctgaata---actgaataatattgataataaaaagagtgtca---acatttatat |
4577579 |
T |
 |
| Q |
201 |
attaca---------ataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||| |
|
|
| T |
4577578 |
attacaataggtaatataggttcatcatgactcaatcaaagggaattagctagacataattaaagaaataaacaacatagt |
4577498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 38316247 - 38316403
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
38316247 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctacggttagt |
38316346 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| |||| || | | ||||| |||||||||||||||||| |
|
|
| T |
38316347 |
agtcatacaaa-caatcataagaaaaacattaagcacaaataattctgaataaagact |
38316403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40677972 - 40678128
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
40677972 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattgaaagaagctagggttagt |
40678071 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
40678072 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
40678128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30719693 - 30719535
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||| |||||| |||| ||| |||| |||||||||||||||||| ||||||| |||| ||||||||||| || ||||||| |
|
|
| T |
30719693 |
ttgaattaaacagaattactattttaggattaaaagttagagttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttaat |
30719594 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
30719593 |
agtcatgcaa---aatcatataaaaagcaatgaacttaaataattctgaataaaaactgaat |
30719535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 42354611 - 42354961
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
42354611 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
42354710 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||| | | |||||||||||||||| |
|
|
| T |
42354711 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaatgattctgaataaagactgaataatattgataataaagacaatttcaactacattcatat |
42354809 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt-nnnnnnnntaaaccgatagagtttcgt |
299 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
42354810 |
attacaataggttcatcatgactcaatcaaa-ggaattagctagacatgattaaataaagaaacaacatagtaaaaaaaaataaaccgatagagtttcgt |
42354908 |
T |
 |
| Q |
300 |
cgatgtcgacgttgctcctcaatcttctttcaatctgtgttgttcttctctct |
352 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42354909 |
cgatgtcggcgttgctcctcaatcttctttcaatctttgttgttcttctctct |
42354961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10963326 - 10963095
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
10963326 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
10963227 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10963226 |
agtcatacaaa-caattatatgaaaagcaatgaacacacgtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
10963128 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
10963127 |
atattacaaaaggttcatcatggctcaatcaaa |
10963095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10966835 - 10966604
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
10966835 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
10966736 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10966735 |
agtcatacaaa-caattatatgaaaagcaatgaacacacgtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
10966637 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
10966636 |
atattacaaaaggttcatcatggctcaatcaaa |
10966604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 30158231 - 30158509
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
30158231 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatgtaattgcacgaagctagggttaat |
30158330 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatg-----aacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--a |
193 |
Q |
| |
|
||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30158331 |
agtcatacaaagcaattatctgaaaagcaatgaacacaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactga |
30158430 |
T |
 |
| Q |
194 |
ttcatatattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
30158431 |
ttcatatattacaatagggtcatcatggcttaatcaataaggaaattagctagacatgatcaaacgaataaacaacata |
30158509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10959819 - 10959588
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || |
|
|
| T |
10959819 |
ttgaatcaaacaggattactatttcagaattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttgat |
10959720 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10959719 |
agtcatac-aagcaattatatgaaaagcaatgaacacaagtaattctgaataaaggctgaataacattaataataaagagagtatcaactactgattcat |
10959621 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| |
|
|
| T |
10959620 |
atattacaaaaggttcatcatgcctcaatcaaa |
10959588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 2784040 - 2783789
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |
|
|
| T |
2784040 |
ttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttgcacgaagctagggttaat |
2783941 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaacta--cattcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
2783940 |
agtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaatactaaagagaggatcaactactcattcat |
2783841 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa-aggg-aattagctagacat |
248 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
2783840 |
atattacaatagattcatcatggcttaatcaagagggaaattagctagacat |
2783789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 15 - 348
Target Start/End: Complemental strand, 9154720 - 9154387
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||| || | ||| ||||||| |||| || |
|
|
| T |
9154720 |
attactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttaggattactagtcatgcaaa-ca |
9154622 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggt |
212 |
Q |
| |
|
|| |||| |||||||||||| |||| ||||||||||||||||| || ||| || |||||||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
9154621 |
atcatatgaaaagcaatgaatacaaataattctgaataaagaccgagtaatatcgataataaagagatt-tcaactactgattcatatattacaataggt |
9154523 |
T |
 |
| Q |
213 |
tcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgtt |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||| |||| |||||||||||||||| |
|
|
| T |
9154522 |
tcatcatggctcaatcaaagggaattagctagacatgattaaatacataaacaacatagtaaaaaaaataaacagataaagttccgtcgatgtcgacgtt |
9154423 |
T |
 |
| Q |
313 |
gctcctcaatcttctttcaatctgtgttgttcttct |
348 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| |
|
|
| T |
9154422 |
gctcctcaatcttcttccaattcgtgttgttcttct |
9154387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 9157907 - 9157658
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||| || |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||| || ||||| | |
|
|
| T |
9157907 |
ttgaattaaatagaattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttact |
9157808 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||| |
|
|
| T |
9157807 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagt-tcaactactgattcat |
9157710 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatga |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9157709 |
atattacaataggttcatcatggctcaatcaaaggaaattagctagacatga |
9157658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 2279818 - 2280138
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2279818 |
ttgaatcaaacaaaattactaattcaggattaaaagttagggttagtagtcattcaattcctaatatcaattcatgtaatttcaagaagctaaggttaat |
2279917 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| | ||||||| || |||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||| |||| | |||| |
|
|
| T |
2279918 |
agtcatac-aggcaattaaat-gaaagcaatgaacacaaataattctgaataaaaactgaataacattattaaataagagagtatcagctactaaatcat |
2280015 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcg |
298 |
Q |
| |
|
|||||| || ||||||||||||||||||||| | | |||||||||||||||| |||| ||| ||||||||| || |||||||||||| || || |
|
|
| T |
2280016 |
atattataa-aggttcatcatggctcaatcatatgaaattagctagacatgaataaagaaacaaacaacattgtaaagaaaataaaccgatagaattccg |
2280114 |
T |
 |
| Q |
299 |
tcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||| || || |||||||||||||| |
|
|
| T |
2280115 |
tcgttgccggcgttgctcctcaat |
2280138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29233786 - 29234013
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
29233786 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
29233884 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||| ||| | ||||||||||||||| |||||| |
|
|
| T |
29233885 |
agtcatac-aagcaattatatgaaaaacaatgaacacaaataattctgaataaagactgaataatattattaaatacgagagtatcaactactaattcat |
29233983 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
29233984 |
atattacaa-aggttcatcatggctcaatca |
29234013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44508727 - 44508481
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||| |||||| |||||||||||||| ||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
44508727 |
ttgaattaaacagaattactatttcaggattaaaagctcgggttagtagtcattcaattcttaagatcaatttatgtgattgcaagaagctagggttaat |
44508628 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| |||| |||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||| | |||||| |||||| |
|
|
| T |
44508627 |
agtcatgcaaa-caatcatatgaaaaacaatgaacacaaataattctgaataaagattgaataatattgataataaagagagttttaactactgattcat |
44508529 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagac |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
44508528 |
atattacaataggttcatcatggctcaattaaagggaattaactagac |
44508481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5887182 - 5887409
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
5887182 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
5887280 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
5887281 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
5887379 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
5887380 |
atattacaa-cggttcatcatggctcaatca |
5887409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 18883132 - 18882901
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
18883132 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaatccctaagatcaatttatgtgattgtaagaagctagggttaat |
18883033 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| | |||||||| |||||| |
|
|
| T |
18883032 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagattttcaactactgattcat |
18882934 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
18882933 |
atattacaatagattcatcatggctcaatcaaa |
18882901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5897166 - 5897393
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
5897166 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-taagaagctagggttaat |
5897264 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
5897265 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
5897363 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
5897364 |
atattacaa-cggttcatcatggctcaatca |
5897393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23374928 - 23375155
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
23374928 |
ttgaatcaaacagaattactaattcaggattaaaagatagggttaaaagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
23375026 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
23375027 |
agtcatac-gagcaattatatgaaaagcaatgaacacaaataattctgaataaaaactgaataatattattaaataagagagtatcaactactaattcat |
23375125 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
23375126 |
atattacaa-cggttcatcatggctcaatca |
23375155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6173551 - 6173778
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
6173551 |
ttgaatcaaacatgattactaattcaggattaaaatctagggttagtggtcattcaattcctaatatcaattcatgtaatttcaagaagctagggttaat |
6173650 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
6173651 |
agtcatacaaa-caattaaat-gaaagcaatgaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
6173748 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||| ||||| |
|
|
| T |
6173749 |
atattacaa-aggttcatcatggcttaatca |
6173778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16414954 - 16415180
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| |||| |||| |||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
16414954 |
ttgaatcaaacagaattactaattcaagattaaaagctagggttaatagtcatttaattcataatatcaattcatataatt-caagaagctagggttaat |
16415052 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
16415053 |
agtcatac-aagcaattatat-gaaagcaataaacacaagcgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
16415150 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
16415151 |
atattacaa-aggttcatcatggctcaatca |
16415180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18515928 - 18516154
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| |||| |||| |||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
18515928 |
ttgaatcaaacagaattactaattcaagattaaaagctagggttaatagtcatttaattcataatatcaattcatataatt-caagaagctagggttaat |
18516026 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
18516027 |
agtcatac-aagcaattatat-gaaagcaataaacacaagcgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
18516124 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
18516125 |
atattacaa-aggttcatcatggctcaatca |
18516154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16314788 - 16315014
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
16314788 |
ttgaatcgaacagaattactaattcaggattaaaatctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
16314886 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||| |||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
16314887 |
agtcatac-aagcaattatat-gaaagcaataaacataagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
16314984 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
|||| |||| |||||||| |||||||||||| |
|
|
| T |
16314985 |
atatcacaa-aggttcattatggctcaatca |
16315014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18495782 - 18496008
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
18495782 |
ttgaatcgaacagaattactaattcaggattaaaatctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
18495880 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||| |||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
18495881 |
agtcatac-aagcaattatat-gaaagcaataaacataagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
18495978 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
|||| |||| |||||||| |||||||||||| |
|
|
| T |
18495979 |
atatcacaa-aggttcattatggctcaatca |
18496008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 116 - 272
Target Start/End: Original strand, 25888727 - 25888884
Alignment:
| Q |
116 |
ttatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggtt |
213 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
25888727 |
ttatgtaaaaaacaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcatatattacaatagatt |
25888826 |
T |
 |
| Q |
214 |
catcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| || |||||||||||| |
|
|
| T |
25888827 |
catcatggcttaatcaaa-agaattagctagacatgattaaaggaataaacaacatagt |
25888884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 19868901 - 19868744
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||| |
|
|
| T |
19868901 |
ttgaattaaacataattactatttcaggattaaaagctagggttaatagtcattcaattcctaagatcaatttatgtaattggaagaagctagggttaat |
19868802 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| ||||||||| |||| |||||||| ||||||| |||||||||||||||||| |
|
|
| T |
19868801 |
agtcatgcaaagcaatcatatgaaaagcaacaaacacaaataattctgaataaagact |
19868744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 20536784 - 20537004
Alignment:
| Q |
8 |
aaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||||| ||||||| || | |||| |||||| || |||||||||||||| |
|
|
| T |
20536784 |
aaacagaattactatttcaggattaaaagatagggttaatagtcaattaattcctaagatcaattaatatgattg-aagaagttagggttaatagtcata |
20536882 |
T |
 |
| Q |
108 |
caaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattac |
205 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||| ||||| ||||||||||||| |||| ||| ||||||||||| | ||||| || ||||| ||||||| |
|
|
| T |
20536883 |
caaa-caatcataagaaaagcaatgaacacaaataattttgaataaagactgcataatattgataataaagag--tttcaaccactgattcacatattac |
20536979 |
T |
 |
| Q |
206 |
aataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
20536980 |
cataggttcatcatgtttcaatcaa |
20537004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4250304 - 4250148
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
4250304 |
ttgaattaaacagaattactatttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttaat |
4250205 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4250204 |
agtcatgcaaa-caatcatacgaaaagcaatgaacacaaataattctgaataaagact |
4250148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 28327362 - 28327206
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
28327362 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattgaaagaagctagggttagt |
28327263 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
28327262 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
28327206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 28330687 - 28330531
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
28330687 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattgaaagaagctagggttagt |
28330588 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
28330587 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
28330531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 27054789 - 27054633
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
27054789 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
27054690 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| ||||||||||||| |||| |
|
|
| T |
27054689 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataatgact |
27054633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 3305768 - 3305612
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| ||| |||| |||||||| ||||||||||||| ||| |||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
3305768 |
ttgaattaaacagaattactatttcattattaaaagttagggttagtagtcattcaatttctattatcaatttatgtgattgaaagaagctagggttagt |
3305669 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
3305668 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
3305612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 183
Target Start/End: Complemental strand, 18551582 - 18551406
Alignment:
| Q |
6 |
tcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtca |
105 |
Q |
| |
|
|||||||| || ||||||||||| || | ||||||||||| |||||| | || |||||| ||||||| || ||||| ||||||||| ||||| ||| || |
|
|
| T |
18551582 |
tcaaacagaatcactatttcaggtttaatagctagggttagtagtcaattaactcctaagatcaattaatacaattgaaagaagctagggttagtagcca |
18551483 |
T |
 |
| Q |
106 |
tacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagt |
183 |
Q |
| |
|
|||||| |||| ||| |||| |||| | || |||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
18551482 |
tacaaa-caatcataagaaaatcaataagcatgtataattctgaataaagactgaatgttattgataataaagagagt |
18551406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 54736330 - 54736406
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgt |
77 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||| ||| ||| ||||||||| ||| ||||||| |||| |
|
|
| T |
54736330 |
ttgaattaaacagaattactatttcaggattaaaagctaggattagtagcgattcaattcttaagatcaatttatgt |
54736406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4226051 - 4226122
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaatt |
72 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||| | |||||||||| |||| ||||||| |
|
|
| T |
4226051 |
ttgaattaaacaaaattactatttcaggattaaaagctagggttagcaatcattcaatttctaagatcaatt |
4226122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 37641786 - 37641513
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
37641786 |
ttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
37641687 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37641686 |
agtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
37641587 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
37641586 |
atattacaataggtttatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacata |
37641513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17902987 - 17903217
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
17902987 |
ttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaatttcaagaagctagggttaat |
17903086 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
17903087 |
agtcatac-aagaaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaataacattaataattaagagagtatcaactactaattcat |
17903184 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| |
|
|
| T |
17903185 |
atattacaaaatgttcatcatggctcaatcaaa |
17903217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28918293 - 28918065
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| || || |||| ||||||| |
|
|
| T |
28918293 |
ttgaatcaaacagaattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaatttatttaatttcatgatgctagggttaat |
28918194 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28918193 |
agtcatacaacacaattatatgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
28918094 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaat |
227 |
Q |
| |
|
||||||||| ||||||||||||||||||| |
|
|
| T |
28918093 |
atattacaaaaggttcatcatggctcaat |
28918065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 49716289 - 49715988
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
49716289 |
ttgaatcaaacagtattactatttcaagattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaatttcaagaagctagggttaat |
49716190 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||| |||||| |
|
|
| T |
49716189 |
agtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaatagcattattaat-aagagaatatcaactactaattcat |
49716093 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtt |
295 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
49716092 |
atattacaa-aggttcatcatggctcaatcaaactaagagtttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtt |
49715994 |
T |
 |
| Q |
296 |
tcgtcg |
301 |
Q |
| |
|
||||| |
|
|
| T |
49715993 |
ccgtcg |
49715988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 49719773 - 49719471
Alignment:
| Q |
1 |
ttgaatcaaacaggattactattt-caggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaa |
99 |
Q |
| |
|
||||||||||||| |||||| ||| || |||| ||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
49719773 |
ttgaatcaaacagtattacttttttcaagattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaatttcaagaagctagggttaa |
49719674 |
T |
 |
| Q |
100 |
tagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attca |
197 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||| ||||| |
|
|
| T |
49719673 |
tagtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaatagcattattaat-aagagaatatcaactactaattca |
49719577 |
T |
 |
| Q |
198 |
tatattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagt |
294 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||| |||||||||||||| |
|
|
| T |
49719576 |
tatattacaa-aggttcatcatggctcaatcaaactaagagtttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagt |
49719478 |
T |
 |
| Q |
295 |
ttcgtcg |
301 |
Q |
| |
|
| ||||| |
|
|
| T |
49719477 |
tccgtcg |
49719471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16839133 - 16839360
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
16839133 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
16839231 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
16839232 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
16839330 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
16839331 |
atattacaa-cggttcatcatggctcaatca |
16839360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16849063 - 16849290
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
16849063 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
16849161 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
16849162 |
agtcat-ccgagcaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
16849260 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
16849261 |
atattacaa-cggttcatcatggctcaatca |
16849290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20964375 - 20964148
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |
|
|
| T |
20964375 |
ttgaatcaaacaaaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaatacatgtaatttcaagaagctatggttaat |
20964276 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |
|
|
| T |
20964275 |
agtcatac-aagcaattaaat-gaaagcaatgaacacaaataattctgaataaagactgaataacattattaaataagagagtatcaactactaaatcat |
20964178 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
20964177 |
atattacaa-aggttcatcatggctcaatca |
20964148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24200444 - 24200670
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
24200444 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
24200542 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| ||| |||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
24200543 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattttgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
24200640 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| |
|
|
| T |
24200641 |
atattacaa-aggttcatcattgctcaatca |
24200670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20981278 - 20981051
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||| || ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
20981278 |
ttgaatcaaacaaaattattaattcaggattaaaagctagggttagtagtcattcaattcttaatatcaattcatgtaatttcaagaagttagggttaat |
20981179 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| | ||||||| || |||||||||||||||| |||||||||||| |||||||||||||||| ||| |||| |||||||||||| | |||| |
|
|
| T |
20981178 |
agtcatac-atgcaattaaat-gaaagcaatgaacacaaataattctgaatatagactgaataacattattaaataagatagtatcaactactaaatcat |
20981081 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
20981080 |
atattacaa-aggttcatcatggctcaatca |
20981051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 23441484 - 23441640
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
23441484 |
ttgaattaaacagaattactatttcaggataaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattgaaagaagctagggttagt |
23441583 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
23441584 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
23441640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33898244 - 33898088
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||| |||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
33898244 |
ttgaattaaacagaattactaattcaagattaaaagctagggttagtagtcattcaattcctaacatcaatttatgtgattgaaagaagctagggttagt |
33898145 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
33898144 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
33898088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 34552884 - 34553040
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||| |||| |||| ||||| ||| ||||| | |
|
|
| T |
34552884 |
ttgaataaaacagaattactatttcaggattaaaagatagggttaatagtcattcaattactaagatcaatttatgtgattgaaagaaactagggttagt |
34552983 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||| || | | ||||| |||||||||||||||||| |
|
|
| T |
34552984 |
agtcatacaaa-caatcataaaaaaaacattaagcacaaataattctgaataaagact |
34553040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18392311 - 18392155
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| |||||||| ||||||||||||| |||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
18392311 |
ttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaatttctaagatcaatttatgtgattgaaagaagctagggttagt |
18392212 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| |||| || | | ||||| |||||||||||||||||| |
|
|
| T |
18392211 |
agtcatacaaa-caatcataagaaaaccattaagcacaaataattctgaataaagact |
18392155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3087925 - 3088035
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||||| || | ||| |||||| || ||||| | |
|
|
| T |
3087925 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagttattcaattcctaagatcaatttatatggttgaaagaagttagggttatt |
3088024 |
T |
 |
| Q |
101 |
agtcatacaaa |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
3088025 |
agtcatacaaa |
3088035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6195736 - 6195580
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| |||| || |||| |||||||||||||||||| ||||||| |||| |||| ||||||| | ||||| | |
|
|
| T |
6195736 |
ttgaattaaacataattactatttcaagattaaaagttatggttggtagtcattcaattcctaagatcaatttatgtgattgaaagaagccagggttagt |
6195637 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| |||||| | | ||||| |||||||||||||||||| |
|
|
| T |
6195636 |
agtcatacaaa-caatcataagaaaagcgttaagcacaaataattctgaataaagact |
6195580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50197160 - 50197230
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaat |
71 |
Q |
| |
|
|||||| |||||| || ||||||||| |||| |||||||| |||| |||||||||||||||||| |||||| |
|
|
| T |
50197160 |
ttgaattaaacagaataactatttcaagattaaaagctagagttagtagtcattcaattcctaagatcaat |
50197230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 26)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22654181 - 22653949
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22654181 |
ttgaatcaaacaagattactatttcaggattaaaagttggggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
22654082 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaacta--cattcat |
198 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22654081 |
agtcatacaaagcaataatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactattgattcat |
22653982 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
22653981 |
atattacaataggttcatcatggctcaatcaaa |
22653949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 14187920 - 14187688
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || |
|
|
| T |
14187920 |
ttgaatcaaacaggattactacttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagttagggtttat |
14187821 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14187820 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
14187721 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||| || |||||||||| |||||| |
|
|
| T |
14187720 |
atattacaatagatttatcatggctcgatcaaa |
14187688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27863754 - 27863986
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27863754 |
ttgaatcaaacagaattactatttcaggattaaaagttagggttaatagtcattcaattcctaagatcaattcatgtaattgcaagaagctagggttaat |
27863853 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27863854 |
agtcatacaaaacaatcatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
27863953 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |
|
|
| T |
27863954 |
atagtacaataggttcatcatggctcaatcaaa |
27863986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 5964175 - 5963902
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
5964175 |
ttgaatcaaacaggattactatttcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
5964076 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |
|
|
| T |
5964075 |
agtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaatcgcattaataatacagagagtatcaactactgattcat |
5963976 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
5963975 |
atattacaataggatcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacata |
5963902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 20262474 - 20262246
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
20262474 |
ttgaatcaaacaggattactatttctggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaatttcaagaagttagggttaat |
20262375 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20262374 |
agtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactaattcat |
20262277 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |
|
|
| T |
20262276 |
atattacaa-aggttcatcatggctcaatcaa |
20262246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21049104 - 21048876
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
21049104 |
ttgaatcaaacaggattactatttctggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaatttcaagaagttagggttaat |
21049005 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21049004 |
agtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactaattcat |
21048907 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |
|
|
| T |
21048906 |
atattacaa-aggttcatcatggctcaatcaa |
21048876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 30645392 - 30645120
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| ||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
30645392 |
ttgaattaaacagaattactatttcaaaattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagttagggttaat |
30645293 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||| |
|
|
| T |
30645292 |
agtcatgcaaa-caatcatatcaaaagcaatgaacacaaataattctgaataaagactggataatattaataataaagagagtttcaactattaattcat |
30645194 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||| |
|
|
| T |
30645193 |
atattacaataggttcatcataactcaatcaaagggaattagttagacatgattaaaggaataaacaacatagt |
30645120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 47 - 322
Target Start/End: Original strand, 18696171 - 18696449
Alignment:
| Q |
47 |
tagtcattcaattcctaatatcaattcatgtaattgcaag-aagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaatt |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |
|
|
| T |
18696171 |
tagtcattcaattcctaatatcaattcatgtaatttcaaggaagttagggttaatagtcatacaa-gcaattatataaaaa-caatgaacacaaataatt |
18696268 |
T |
 |
| Q |
146 |
ctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaa---agggaattag |
240 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| || | | | ||| |
|
|
| T |
18696269 |
ctaaataaagactgaataacattaataataaagagagtatcaacttctaattcatatattacaa-aggttcatcatggctcaatgaaactaagaatttaa |
18696367 |
T |
 |
| Q |
241 |
ctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
18696368 |
ctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgatgactttgctcctcaat |
18696449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24434950 - 24434723
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||| ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
24434950 |
ttgaaccaaacagaattattaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
24434852 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
24434851 |
agtcatac-gagtaattatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
24434753 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
24434752 |
atattacaa-cggttcatcatggctcaatca |
24434723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24444996 - 24444769
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||| ||||||| |||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
24444996 |
ttgaaccaaacagaattattaattcaggattaaaagctaggattaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
24444898 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
24444897 |
agtcatac-gagtaattatatgaaaagaaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
24444799 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
24444798 |
atattacaa-cggttcatcatggctcaatca |
24444769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24903684 - 24903910
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| |
|
|
| T |
24903684 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaattcatataaattcaagaagctagggttaat |
24903783 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||| | || ||| ||||||||||||||||| | ||| |
|
|
| T |
24903784 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaataata-tattaaataagagagtatcaactactaaaccat |
24903880 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
24903881 |
atattacaa-aggttcatcatggctcaatca |
24903910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 17543969 - 17543742
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| | ||| |||||| ||||||| |
|
|
| T |
17543969 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatataaattcaataagctagggttaat |
17543870 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
17543869 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
17543772 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||| | | ||||||||||||| ||||| |
|
|
| T |
17543771 |
atattacga-aagttcatcatggctaaatca |
17543742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17013232 - 17013459
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| | ||| |||||| ||||||| |
|
|
| T |
17013232 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatataaattcaataagctagggttaat |
17013331 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
17013332 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaatattattattaaataagagagtatcaactactaaatcat |
17013429 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||| | | ||||||||||||| ||||| |
|
|
| T |
17013430 |
atattacga-aagttcatcatggctaaatca |
17013459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 31981267 - 31981038
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
31981267 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaatatcaatttatgtgattgtaagaagctatggttaat |
31981168 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| ||| |||| |||| |||| |||||||||||| ||||| |||||||| ||| |||||||| ||||| |||||||| |||||| |
|
|
| T |
31981167 |
agtcattgaaa-caatcatatgaaaatcaatgaacacaaataatt-----------ctgaataatattgataataaaaagagtttcaactactgattcat |
31981080 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattag |
240 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31981079 |
atattacaataggtttatcatggctcaatcaaagggaattag |
31981038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 31984908 - 31984592
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||| |||||||||||| ||||||| | ||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
31984908 |
ttgaattaaacagaattattatttcaggattaaaagctatgattagtagtcattcaattcctaagatcaatttatgtgattgtaagaagctatggttaat |
31984809 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaat-----aataaagagagtatcaactac--a |
193 |
Q |
| |
|
|||||| | || |||| |||| |||||||||||| ||| |||||||||||||||| ||| || |||||| ||||| |||||||| | |
|
|
| T |
31984808 |
agtcatgc-aaccaatcatatgaaaagcaatgaataca----------aataaagactgaataatattgataataaaataaaaagagtttcaactactga |
31984720 |
T |
 |
| Q |
194 |
ttcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagag |
293 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||| || |||| || ||| || |||||||||||| ||||||||||||| |
|
|
| T |
31984719 |
ttcatatattacaataggtttatcatggcccaatcaaagggaattagttaaacat-atcaaaggaataaacaacatagtaaagaaaataaaccgatagag |
31984621 |
T |
 |
| Q |
294 |
tttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||||||| ||||| | || ||||||||| |
|
|
| T |
31984620 |
cttcgtcgttgtcggctttactcctcaat |
31984592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5827945 - 5827789
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||| |||||| ||| ||||||||||||| |||||||||||||||||| || |||| |||| |||| ||||||||| ||||||| |
|
|
| T |
5827945 |
ttgaattaaacagaattactctttcagaattaaaagctagggttagtagtcattcaattcctaagattaatttatgtgattgaaagaagctagggttaat |
5827846 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||| |||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5827845 |
agtcaagcaaa-caatcataagaaaagcaatgaacacaaataattctgaataaagact |
5827789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9467046 - 9466889
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
9467046 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
9466947 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactg |
159 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| ||||| ||||||||||||| |
|
|
| T |
9466946 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattatgaataaagactg |
9466889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 39660157 - 39660313
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
39660157 |
ttgaattaaacaaaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
39660256 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
39660257 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
39660313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 13332006 - 13331851
Alignment:
| Q |
2 |
tgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaata |
101 |
Q |
| |
|
||||| |||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| || |
|
|
| T |
13332006 |
tgaattaaacagaattactatttcagaattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagta |
13331907 |
T |
 |
| Q |
102 |
gtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||| || |||| ||| ||||||| | | ||||| ||||| |||||||||||| |
|
|
| T |
13331906 |
gtcatacgaa-caatcataagaaaagcattaagcacaaataattatgaataaagact |
13331851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 23613248 - 23613140
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatct |
324 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| | ||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
23613248 |
aatcaaaggaaattagctagacatggttaaatacataaataacatagtaaagaaaataaaccgatagagtttcgtcgttgtcgacgttgct-ctcaatct |
23613150 |
T |
 |
| Q |
325 |
tctttcaatc |
334 |
Q |
| |
|
|||||||||| |
|
|
| T |
23613149 |
tctttcaatc |
23613140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 452954 - 452843
Alignment:
| Q |
110 |
aagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaa |
207 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
452954 |
aagcaattata-agaaagcaatgaacacaagtaattctgaataaagactgaataacatt----------agagtatcaactactaattcatatattacaa |
452866 |
T |
 |
| Q |
208 |
taggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|| |||||||| ||||||||||| |
|
|
| T |
452865 |
-agattcatcatagctcaatcaaa |
452843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 18721693 - 18721790
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
18721693 |
aatcaaaggaaattagctagacatggttaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtcggcgttgctcctcaat |
18721790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 25595069 - 25595166
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
25595069 |
aatcaatggaaattagctagacatgattaaatacataaacaacatagtaaaaaaaataaaccgatagagtttcgtcgttgtcggcgttgctcctcaat |
25595166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 25591890 - 25591976
Alignment:
| Q |
230 |
aagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctc |
316 |
Q |
| |
|
|||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
25591890 |
aaggaaattagctagacatgattaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtcgacgttgctc |
25591976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 453006 - 452959
Alignment:
| Q |
42 |
gttaatagtcattcaattcctaatatcaattcatgtaattgcaagaag |
89 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
453006 |
gttagtagtcaatcaattcctaatatcaattcatgtaatttcaagaag |
452959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 45155692 - 45155729
Alignment:
| Q |
235 |
aattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
45155692 |
aattagctagacatgattaaagaaataaacaacatagt |
45155729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 26548012 - 26547739
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
26548012 |
ttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
26547913 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26547912 |
agtcatacaaaacaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
26547813 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
26547812 |
atattaaaataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacata |
26547739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 26551571 - 26551298
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
26551571 |
ttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
26551472 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26551471 |
agtcatacaaaacaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
26551372 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgattaaataaagaaacaacata |
270 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
26551371 |
atattaaaataggttcatcatggcttaatcaacaaggaaattagctagacatgatcaaacgaataaacaacata |
26551298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 4732031 - 4732263
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4732031 |
ttgaatcaaacatgattactatttcatgattaaaagctagggttaatagtcatccaattcctaatatcaattcatgtaattgcaagaagctagggttaat |
4732130 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
4732131 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataagattaataataaagagaagatcaactactgattcat |
4732230 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
4732231 |
atattacaataggttcaacatggctcaatcaaa |
4732263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 28562559 - 28562810
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |
|
|
| T |
28562559 |
ttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttgcacgaagctagggttaat |
28562658 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
28562659 |
agtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagaggatcaactactgattcat |
28562758 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa-aggg-aattagctagacat |
248 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
28562759 |
atattacaatagattcatcatggcttaatcaagagggaaattagctagacat |
28562810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 28566127 - 28566378
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |
|
|
| T |
28566127 |
ttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttgcacgaagctagggttaat |
28566226 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
28566227 |
agtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagaggatcaactactgattcat |
28566326 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa-aggg-aattagctagacat |
248 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
28566327 |
atattacaatagattcatcatggcttaatcaagagggaaattagctagacat |
28566378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 34652955 - 34653225
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||| || ||||||| |
|
|
| T |
34652955 |
ttgaattaaacaaaattattatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttaat |
34653054 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||| |
|
|
| T |
34653055 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactactaattcat |
34653153 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaata-aagaaacaacatagt |
272 |
Q |
| |
|
|||||||||||| | |||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| |
|
|
| T |
34653154 |
atattacaatagat---tcatggctcaatcaaatggaattagctagacatgattaaaaagaataaacaacatagt |
34653225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 25185286 - 25185073
Alignment:
| Q |
20 |
tatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattat |
119 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||| |||||||| ||| |||| || |
|
|
| T |
25185286 |
tattttaggattaaaagctagggttaatagtcattcaattcctaaaatcaatttatgtgattgcaagaagctagggttattagtcatataaaacaatcat |
25185187 |
T |
 |
| Q |
120 |
ataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatc |
217 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25185186 |
ataaaaagcaatgaacacaagtatttctaaataaagattgaataatattaataacaaagagagtatcaactactgattcatatattacaataggttcatc |
25185087 |
T |
 |
| Q |
218 |
atggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
25185086 |
atggctcaatcaaa |
25185073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19686088 - 19685855
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
19686088 |
ttgaattaaacagaattactatttcaggattaaaagctagggttattagtcattcaattcctaagatcaatttatgtgattgtaagaagctagggttaat |
19685989 |
T |
 |
| Q |
101 |
agtcatacaaagcaat--tatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attc |
196 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||| |
|
|
| T |
19685988 |
agtcatgcaaa-caatcatatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactactgattc |
19685890 |
T |
 |
| Q |
197 |
atatattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |
|
|
| T |
19685889 |
atatattacaatagatttatcatggctcaatcaaa |
19685855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19689471 - 19689238
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
19689471 |
ttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagctagggttaat |
19689372 |
T |
 |
| Q |
101 |
agtcatacaaagcaat--tatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attc |
196 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||| |
|
|
| T |
19689371 |
agtcatgcaaa-caatcatatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactactgattc |
19689273 |
T |
 |
| Q |
197 |
atatattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
19689272 |
atatattacaatagattcatcatggctcaatcaaa |
19689238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26726864 - 26726638
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
26726864 |
ttgaatcaaacagatttactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctatggttaat |
26726766 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
26726765 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagacttaataatattattaaataagagagtatcaactactaaatcat |
26726668 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
26726667 |
atattacaa-aggttcatcatggctcaatca |
26726638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17944569 - 17944409
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
17944569 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaat |
17944470 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
17944469 |
agtcatgcaaa-caatcatataaaaagcaatgaacataaataattctgaataaagactgaat |
17944409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 66 - 248
Target Start/End: Complemental strand, 2453186 - 2453008
Alignment:
| Q |
66 |
atcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataac |
165 |
Q |
| |
|
||||||| |||| |||||||||| || ||||||||||||| ||||| |||| |||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
2453186 |
atcaatttatgtggttgcaagaagttagggttaatagtcat-----gcaatcatatgaaaagcaatgaatacaaataattctgaataaagactgaataat |
2453092 |
T |
 |
| Q |
166 |
attaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaaagggaattagctagacat |
248 |
Q |
| |
|
||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2453091 |
attgataataaa-agagtttcaactactaattcatatattacaataggttcatcatggctcaatcaaagggaattagctagacat |
2453008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40800116 - 40800234
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
40800116 |
ttgaatcaaacaggattactatttcaggattaaaaggtagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
40800215 |
T |
 |
| Q |
101 |
agtcatacaaagcaattat |
119 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
40800216 |
agtcatacaaaacaattat |
40800234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33921060 - 33920904
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
33921060 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttaat |
33920961 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33920960 |
agtcatgcaaa-caatcatacgaaaagcaatgaacacaaataattctgaataaagact |
33920904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1810608 - 1810765
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||| |||| |||||||||||||||||||||| |||| ||||||| ||||||||| |||||| || ||||||| |
|
|
| T |
1810608 |
ttgaattaaacagaattacaatttcaggattaaaagttagggttaatagtcattcaatttctaagatcaatttatgtaattgtaagaagttagggttaat |
1810707 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| |||| |||| |||||||||||| ||||||| |||||||||| |
|
|
| T |
1810708 |
agtcatgcaaaacaatcatatgaaaaacaatgaacacaaataattctcaataaagact |
1810765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26337901 - 26337745
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||| ||| ||||||| |
|
|
| T |
26337901 |
ttgaattaaacagaattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaaactagggttaat |
26337802 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| || | |||| ||| ||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
26337801 |
agtcattcata-caatcatacgaaaagcaataaacacaaataattctgaataaagact |
26337745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2500208 - 2500362
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
2500208 |
ttgaattaaacagaattactatttcaggattaaaagctagggttaatagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
2500307 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaaga |
156 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| || ||||||||||||| |
|
|
| T |
2500308 |
agtcatacaaa-caatcataagaaaagcattaagcacaaatatttctgaataaaga |
2500362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9690681 - 9690525
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||| ||||||||| ||||| |||||||||||| ||||||| |||| |||| || |||||| ||||||| |
|
|
| T |
9690681 |
ttgaattaaacataattactatttcaggattaaaaactagggttagtagtcgttcaattcctaagatcaatttatgtgattgaaataagctagggttaat |
9690582 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| || ||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
9690581 |
agtcatgcaaa-caatcgtacgaaaagcaatgaacacaaataattatgaataaagact |
9690525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 3195063 - 3194943
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
|||| |||||||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||| ||||||||||| || ||||||||||||| |||| || |
|
|
| T |
3195063 |
attattatttcaggattaaaagctaaggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaaa-ca |
3194965 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaaca |
136 |
Q |
| |
|
|| |||| |||||||||||||| |
|
|
| T |
3194964 |
atcatatgaaaagcaatgaaca |
3194943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 33321124 - 33321276
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| ||||| || |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
33321124 |
ttgaattaaacagaattactatttcaggattaaaagttagggctagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
33321223 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaa |
154 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| ||||| |||||||| |
|
|
| T |
33321224 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattttgaataaa |
33321276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 3194925 - 3194845
Alignment:
| Q |
193 |
attcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaata-aagaaacaacatagt |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||||||| |
|
|
| T |
3194925 |
attcatatattacaataggttcatcatggctcaatcaaagggaattagctatacatgattaaaaagaataaacaacatagt |
3194845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 21333103 - 21333213
Alignment:
| Q |
235 |
aattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatc |
334 |
Q |
| |
|
|||||||||||||| || ||| || |||||||||||| ||||||||||||||| ||||| || || | |||||||||||| ||||||||||| |
|
|
| T |
21333103 |
aattagctagacataataaaaggaataaacaacatagtaaagaaaataaaccgatagagttccgtcgctgccggc-ttgctcctcaattttctttcaatc |
21333201 |
T |
 |
| Q |
335 |
tgtgttgttctt |
346 |
Q |
| |
|
||||||||||| |
|
|
| T |
21333202 |
ggtgttgttctt |
21333213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 21336119 - 21336229
Alignment:
| Q |
235 |
aattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatc |
334 |
Q |
| |
|
|||||||||||||| || ||| || |||||||||||| ||||||||||||||| ||||| || || | |||||||||||| ||||||||||| |
|
|
| T |
21336119 |
aattagctagacataataaaaggaataaacaacatagtaaagaaaataaaccgatagagttccgtcgctgccggc-ttgctcctcaattttctttcaatc |
21336217 |
T |
 |
| Q |
335 |
tgtgttgttctt |
346 |
Q |
| |
|
||||||||||| |
|
|
| T |
21336218 |
ggtgttgttctt |
21336229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 39192080 - 39192043
Alignment:
| Q |
281 |
taaaccgatagagtttcgtcgatgtcgacgttgctcct |
318 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
39192080 |
taaatcgatagagtttcgtcgttgtcgacgttgctcct |
39192043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 14969586 - 14969334
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
14969586 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaat |
14969487 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14969486 |
agtcatacaaagcaattatctgaaaagcaatga--acaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcat |
14969389 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca--aagggaattagctagacatgat |
251 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||| |
|
|
| T |
14969388 |
atattacaataggttcatcatggcttaatcaacaaggaaattagcaagacatgat |
14969334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 11410683 - 11410382
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
11410683 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaatttcaagaagctagggttaat |
11410584 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |
|
|
| T |
11410583 |
agtcatac-aagcaattatat-gaaagcaatggacacaagtaattctgaataaagactgaataacattattaat-aagagagtatcaactactaattcat |
11410487 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtt |
295 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
11410486 |
atattacaa-aggttcatcatggctcaatcaaactaagagtttagctagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtt |
11410388 |
T |
 |
| Q |
296 |
tcgtcg |
301 |
Q |
| |
|
||||| |
|
|
| T |
11410387 |
ccgtcg |
11410382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 17231774 - 17231545
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
17231774 |
ttgaatcaaacaggattacaatttcagaattaaaagatagggttaatagtcattcaattcctaatatcaattcatgtaatttcaagaagatagggttaat |
17231675 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
17231674 |
agtcatac-aagcaattatat-gaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcgactactaattcat |
17231577 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |
|
|
| T |
17231576 |
atattacaa-agcttcatcatggctcaatcaaa |
17231545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22920447 - 22920220
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
22920447 |
ttgaatcaaacagaattactaattcaggataaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
22920349 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
22920348 |
agtcatac-aagcaattatatgaaaagcaatgaacacaaataactctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
22920250 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
22920249 |
atattacaa-aggttcatcatggctcaatca |
22920220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13095898 - 13096112
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
13095898 |
ttgaatcaaacaggattactatttcatgattaaaagttagggttagtagtcattcaattcctaatatcaattcatgtaatttcaagaagttagggttaat |
13095997 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
13095998 |
agtcatac-aagcaattatat-gaaatcaatgaatacaagtaattctgaataaagactgaataacattattaataaagagagtatcaactactaattcat |
13096095 |
T |
 |
| Q |
199 |
atattacaataggttcat |
216 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
13096096 |
atattacaa-aggttcat |
13096112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 34502261 - 34502024
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||| |||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
34502261 |
ttgaattaaacagaattactacttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagctagggttaat |
34502162 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||| |
|
|
| T |
34502161 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaataattctgaataaagactgaataatattgataataaagagagtttcaactactgattcat |
34502063 |
T |
 |
| Q |
199 |
at------attacaataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
|| |||||||||| |||||||||||||||||||| |
|
|
| T |
34502062 |
atattacaattacaatagattcatcatggctcaatcaaa |
34502024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 16 - 209
Target Start/End: Original strand, 3827018 - 3827225
Alignment:
| Q |
16 |
ttactatttcaggattgaaagctagggttaatagtcattcaa-------------ttcctaatatcaattcatgtaattgcaagaagctaaggttaatag |
102 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
3827018 |
ttactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcctaatatcaattcatgtaattgcaagaagttagggttaatag |
3827117 |
T |
 |
| Q |
103 |
tcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatat |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
3827118 |
tcatacaaagcaattatataaaaaacaataaatacaaataattctgaataaagactgaataacattaataataaa-agagtatcaactactaattcatat |
3827216 |
T |
 |
| Q |
201 |
attacaata |
209 |
Q |
| |
|
| ||||||| |
|
|
| T |
3827217 |
aatacaata |
3827225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 2330548 - 2330318
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||| || ||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||| |||| |||| ||||| ||| |||||| |
|
|
| T |
2330548 |
ttgaattaaatagaattactatttcaggattaaaagctagggttagtagtcattcaatttctaagatcaatttatgttattgaaagaatctagagttaat |
2330449 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| ||| |||| |||| |||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||| |||||||| || ||| |
|
|
| T |
2330448 |
agtcatgcaaa-taatcatatgaaaaacaatgaacacaaataattatgaataaagactgaataatattgataataaagagagcttcaactactgatccat |
2330350 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
2330349 |
atattacaataggttcatcatggctcaatcaa |
2330318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 17696500 - 17696276
Alignment:
| Q |
8 |
aaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcata |
107 |
Q |
| |
|
|||||| ||||| ||||||||||| | ||| |||| || ||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||||||| |
|
|
| T |
17696500 |
aaacagaattacaatttcaggattaagagccagggctagtagtcattcaatttctaagatcaatttatgtgattgcaagaagttagggttaatagtcata |
17696401 |
T |
 |
| Q |
108 |
caaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataa-cattaataataaagagagtatcaactac--attcatatatta |
204 |
Q |
| |
|
|||| || | |||| |||||| |||||||||| ||||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
17696400 |
caaa-cagtcatatgaaaagcgatgaacacaaataattctaaataaagactgaataatcattgataataaagagagt-tcaactactgattcatatatta |
17696303 |
T |
 |
| Q |
205 |
caataggttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
17696302 |
caataggttcatcatggctcaatcaaa |
17696276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 31262689 - 31262427
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||| || |||||| |
|
|
| T |
31262689 |
ttgaattaaacagaactactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagagttaat |
31262590 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
| |||| |||| |||| |||| ||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| |||| ||| | |
|
|
| T |
31262589 |
aatcatgcaaa-caatcatatgaaaagcaatgaacacaaataattctgaataaagaccgaataaaattgataataaagagagtttcaaatac-------t |
31262498 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
| | | |||| |||||| ||||| ||||||||| |||||| |||| ||||||||| ||| |||||||||||| |
|
|
| T |
31262497 |
aattc-atagattcatcttggcttaatcaaaggaaattagttagatatgattaaagaaataaacaacatagt |
31262427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9313985 - 9314145
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| | ||||| ||||| |||||||||||||||||| ||||||| |||| ||||||| |||||| ||||||| |
|
|
| T |
9313985 |
ttgaattaaacagaattactatttcaggattaagagctatggttagtagtcattcaattcctaagatcaatttatgtgattgcaataagctagggttaat |
9314084 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
9314085 |
agtcatgcaaa-caatcatataaaaagcaatgaacataaataattctgaataaagactgaat |
9314145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28117758 - 28117598
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
28117758 |
ttgaattaaacaaaattactatttcaggattaaaagctagggttagtagtcattcaattcctaaaatcaatttatgtgattgcaagaagctagggttaat |
28117659 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
| |||| ||| |||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
28117658 |
aatcat-gaaaacaatcatataaaaagcaatgaacataaataattctgaataaagactgaat |
28117598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12746724 - 12746568
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
12746724 |
ttgaattaaacagaattactatttcacgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttaat |
12746625 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12746624 |
agtcatgcaaa-caatcatacgaaaagcaatgaacacaaataattctgaataaagact |
12746568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 31123334 - 31123117
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
||||||||||||||||| |||||||||| | |||||| | ||| ||||| ||||||| | | |||| ||||||||| ||||||||||||| |||| || |
|
|
| T |
31123334 |
attactatttcaggattaaaagctagggaaagtagtcaattaatacctaagatcaattaacatgattgaaagaagctagggttaatagtcatgcaaa-ca |
31123236 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac---attcatatattacaatagg |
211 |
Q |
| |
|
|| ||| |||||||||||| |||| |||||||||||||||||| ||| |||| |||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
31123235 |
atcataataaaagcaatgaaaacaaataattctgaataaagactacatatcatttataataaagagagt-tcaactacttggttcacatattacaatagc |
31123137 |
T |
 |
| Q |
212 |
ttcatcatggctcaatcaaa |
231 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
31123136 |
ttcataatggctcaatcaaa |
31123117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 35027333 - 35027489
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
35027333 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagt |
35027432 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||| ||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
35027433 |
agtcatataaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
35027489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 33679402 - 33679544
Alignment:
| Q |
15 |
attactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagca |
114 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||| |||| |||| |||||| || ||||||||||||| |||| || |
|
|
| T |
33679402 |
attactatttcaggattaaaagctagggttagtagtcattcaattcctaagataaatttatgtgattgaaagaagttagggttaatagtcatgcaaa-ca |
33679500 |
T |
 |
| Q |
115 |
attatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|| ||| ||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
33679501 |
atcatacgaaaagcaatgaacacaaataattctaaataaagact |
33679544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5618509 - 5618656
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
5618509 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagaagtcattcaattcttaa-atcaatttatgtgattgcaagaagctagggttaat |
5618607 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaa |
150 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||| ||||||| ||||| |||| |
|
|
| T |
5618608 |
agtcatgcaaa-caatcatatgaaaagcaataaacacaaataattatgaa |
5618656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28894681 - 28894837
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||| | |
|
|
| T |
28894681 |
ttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagttagggttagt |
28894780 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| ||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
28894781 |
agtcatacaaa-caatcataagaaaagcattaagcacaaataattctgaataaagact |
28894837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 7560435 - 7560605
Alignment:
| Q |
61 |
ctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactga |
160 |
Q |
| |
|
|||| ||||||| || | |||| ||||||||| ||||||| |||||||||| |||| ||| |||| || |||||| || |||||||||||||||||||| |
|
|
| T |
7560435 |
ctaagatcaattaatatgattgaaagaagctagggttaattgtcatacaaa-caatcataagaaaaacactgaacataaataattctgaataaagactga |
7560533 |
T |
 |
| Q |
161 |
ataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
|||| ||| |||||||||||||| |||||||| ||||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
7560534 |
ataatattgataataaagagagtttcaactactgattcacatatcacaataggttcatcatggttcaatcaa |
7560605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 2331200 - 2330981
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||| ||||||| |||| |||||| | |||| |||||||||||||||||| ||||||| |||| |||| ||||||||| | | ||| |
|
|
| T |
2331200 |
ttgaattaaacagaattgatatttcatgattaaaagctggtgttagtagtcattcaattcctaagatcaatttatgttattgaaagaagctaggatcaat |
2331101 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||||| ||||| ||||||| ||| ||||||||||||| |||||||| || ||| |
|
|
| T |
2331100 |
agtcatgcaaa-caatcatatgaaaagcaatgaacacaaataatt-----------atgaataatattgataataaagagagcttcaactactgatccat |
2331013 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
2331012 |
atattacaataggttcatcatggctcaatcaa |
2330981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 23388511 - 23388608
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
23388511 |
aatcaaaggaaattagctagacatggttaaatacataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgtcggcgttgctcctcaat |
23388608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 9953679 - 9953572
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatct |
324 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| | |||||||||| | ||| ||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
9953679 |
aatcaaaggaaattagctagacatggttaaatacataaacaacataataaaaaaaataagccgatagagtttcgtcgttgtcggcgttgctcctcaa--t |
9953582 |
T |
 |
| Q |
325 |
tctttcaatc |
334 |
Q |
| |
|
|||||||||| |
|
|
| T |
9953581 |
tctttcaatc |
9953572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 22464240 - 22464173
Alignment:
| Q |
94 |
ggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
||||||||||||| |||| |||| ||||||||||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
22464240 |
ggttaatagtcatgcaaa-caatcatataaaaagcaatgaacataaataattctgaataaaaactgaat |
22464173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 5738496 - 5738572
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcg |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||| |
|
|
| T |
5738496 |
aatcaaaggaaattagctagacatgattaaaataataaacaacatagtaaagaaaataaaccgatagagttccgtcg |
5738572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 15579130 - 15579186
Alignment:
| Q |
16 |
ttactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaatt |
72 |
Q |
| |
|
||||||||||| |||| ||| |||||||| |||||||||||||||||| ||||||| |
|
|
| T |
15579130 |
ttactatttcatgattaaaatatagggttagtagtcattcaattcctaagatcaatt |
15579186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5618414 - 5618457
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggtt |
44 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
5618414 |
ttgaattaaacagaattactatttcaggattaaaagctagggtt |
5618457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 20189837 - 20189882
Alignment:
| Q |
203 |
tacaataggttcatcatggctcaatcaaagggaattagctagacat |
248 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
20189837 |
tacaatagattcatcttggcttaatcaaaggaaattagctagacat |
20189882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 22146154 - 22146109
Alignment:
| Q |
203 |
tacaataggttcatcatggctcaatcaaagggaattagctagacat |
248 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
22146154 |
tacaatagattcatcttggcttaatcaaaggaaattagctagacat |
22146109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0062 (Bit Score: 166; Significance: 9e-89; HSPs: 2)
Name: scaffold0062
Description:
Target: scaffold0062; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 53082 - 53405
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||| |
|
|
| T |
53082 |
ttgaatcaaacactattactatttcaagattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaatttcaggaagttagggttaat |
53181 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
53182 |
agtcatac-aagcaattatataaaaa-caatgaacacaaataattctaaataaagactgaataacattaataataaagagagtatcaacttctaattcat |
53279 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaa---agggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtt |
295 |
Q |
| |
|
||||||||| ||||||||||||||||||| || | | | ||| ||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
53280 |
atattacaa-aggttcatcatggctcaatgaaactaagaatttaactagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtt |
53378 |
T |
 |
| Q |
296 |
tcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
|||||| || ||| |||||||||||| |
|
|
| T |
53379 |
tcgtcgttgatgactttgctcctcaat |
53405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0062; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 47 - 334
Target Start/End: Original strand, 68027 - 68316
Alignment:
| Q |
47 |
tagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattc |
146 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||| ||||||| || |||||||||||||| || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
68027 |
tagtcattcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcatataa-gcaattatataaaaa-caatgaacacaagtaattc |
68124 |
T |
 |
| Q |
147 |
tgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctcaatcaa---agggaattagc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || | | ||| | |
|
|
| T |
68125 |
tgaataaagactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatggctcaatgaaactaataatttaac |
68223 |
T |
 |
| Q |
242 |
tagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcgatgtcgacgttgctcctcaatcttctttcaatc |
334 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||| | |||||| |
|
|
| T |
68224 |
tagacatgatcaaataaataaacaacatagtaaagaaaataaaccgatagagtttcgtcgttgatgactttgctcctcaatcttttctcaatc |
68316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214 (Bit Score: 145; Significance: 3e-76; HSPs: 3)
Name: scaffold0214
Description:
Target: scaffold0214; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 19974 - 19675
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
19974 |
ttgaattaaacataattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagttagggttaat |
19875 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| |||| |||| ||||| |||||||||| |||||||| ||||||| ||||||| ||| |||||||||||||| |||||||| |||||| |
|
|
| T |
19874 |
agtcatgcaaa-caataatatgaaaag--atgaacacaaataattctggataaagagtgaataatattgataataaagagagtttcaactactgattcat |
19778 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcg |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||| |||| |
|
|
| T |
19777 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacataattaaagaattaaacaacatagtaaagaaaataaaccgatagagcttcg |
19678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 13525 - 13225
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||||| ||| |||||| |||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
13525 |
ttgaattaaacataattcctatttgaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagttagggttaat |
13426 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||| |||| ||| |||| ||||||| | ||||||| ||||| || ||||||||||||||| ||| |||||||| ||||| |||| ||| |||||| |
|
|
| T |
13425 |
agtcatgcaaaa-aatcatatgaaaagcagttaacacaaataattttggataaagactgaataatattgataataaa-agagtttcaattactgattcat |
13328 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcg |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||| |
|
|
| T |
13327 |
atattacaataggttcatcatggctcaatcaaagggaattagctagacataattaaaaaaataaacaacatagtaaagaaaataaaccgatagagcttcg |
13228 |
T |
 |
| Q |
299 |
tcg |
301 |
Q |
| |
|
||| |
|
|
| T |
13227 |
tcg |
13225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 301
Target Start/End: Complemental strand, 27514 - 27241
Alignment:
| Q |
28 |
gattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaatagtcatacaaagcaattatataaaaag |
127 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||| || ||||||||||||| |||| ||| |||| ||||| |
|
|
| T |
27514 |
gattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaaa-aatcatatgaaaag |
27416 |
T |
 |
| Q |
128 |
caatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcatatattacaataggttcatcatggctca |
225 |
Q |
| |
|
|| | ||||||| ||||| || ||||||||||||||| ||| |||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
27415 |
cagttaacacaaataattttggataaagactgaataatattgataataaa-agagtttcaattactgattcatatattacaataggttcatcatggctca |
27317 |
T |
 |
| Q |
226 |
atcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtcg |
301 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| ||||||| |
|
|
| T |
27316 |
atcaaagggaattagctagacataattaaaaaaataaacaacatagtaaagaaaataaaccgatagagcttcgtcg |
27241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 28860 - 29087
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
28860 |
ttgaatcaaacaggattactaattcaagattaaaagctagggttagtagtcattcaattcctaatatcaattcatataatttcaagaagctagggttaat |
28959 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
28960 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaatactattattaaataagagagtatcaactactaaatcat |
29057 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
29058 |
atattacaa-aggttcatcatggctcaatca |
29087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27280 - 27053
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
27280 |
ttgaatcaaacagaattactaattcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatataatt-caagaagctagggttaat |
27182 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
27181 |
agtcatac-tagcaattatctgaaaagcaatgaacacaaataattctgaataaagactgaataatattattaaataagagagtatcaactactaattcat |
27083 |
T |
 |
| Q |
199 |
atattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |
|
|
| T |
27082 |
atattacaa-cggttcattatggctcaatca |
27053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 27079 - 27285
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| || ||||||| |
|
|
| T |
27079 |
ttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataaattcaagaagttagggttaat |
27178 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactac--attcat |
198 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||| |
|
|
| T |
27179 |
agtcatac-aagcaattatat-gaaagcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagtatcaactactaaatcat |
27276 |
T |
 |
| Q |
199 |
atattacaa |
207 |
Q |
| |
|
||||||||| |
|
|
| T |
27277 |
atattacaa |
27285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 31347 - 31492
Alignment:
| Q |
83 |
caagaagctaaggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagag |
182 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
31347 |
caagaagctagggttaatagtcatacaa-gcaattatatgaaa-gcaataaacacaagtgattctgaataaagactgaataatattattaaataagagag |
31444 |
T |
 |
| Q |
183 |
tatcaactac--attcatatattacaataggttcatcatggctcaatca |
229 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31445 |
tatcaactactaaatcatatattacaa-aggttcatcatggctcaatca |
31492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0360 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0360
Description:
Target: scaffold0360; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 6204 - 5960
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||| |
|
|
| T |
6204 |
ttgaatcaaacaggattcctatttcagaattaaaagctagagttagtagtcattcaattcctaatatcaattcatgtaatt----gaagctatgattaat |
6109 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
| |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
6108 |
aatcatac-aagcaattatat-gaaagcaataaacacaagtaattctgaataaagactgaataacattattaataaagaaagtatcaacta----tatat |
6015 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaaca |
265 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||| |||| ||| ||||| |
|
|
| T |
6014 |
atta----------atcatggctcaatcaaagggaattagctaaacatgaataaagaaacaaaca |
5960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0360; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 2367 - 2075
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| | ||||| |
|
|
| T |
2367 |
ttgaatcaaacaggattactatttcaggattaaaagctagggttagtagtcattcaattcctaatatcaa---------------gaagctatgattaat |
2283 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactacattcatat |
200 |
Q |
| |
|
| |||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
2282 |
aatcatacaa-gcaattatatgaaa-gcaatgaacacaactaattctgaataaagactgaataacattattaataaagaaagtatcaacta----tatat |
2189 |
T |
 |
| Q |
201 |
attacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagagtttcgtc |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| | |||| ||| |||||||||| | ||||||||||||||| |||| |
|
|
| T |
2188 |
atta----------atcatggctcaatcaaagggaattagctagacatcaataaagaaacaaacaacataataaagaaaataaaccgatagagttccgtc |
2099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7156 - 6996
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
7156 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaatttctaagatcaatttatgtgattgcaagaagctagggttaat |
7057 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaat |
162 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
7056 |
agtcatgcaaa-caatcatataaaaagcaatgaacataaataattctgaataaagactgaat |
6996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 13510 - 13354
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| ||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||| |||| |||| |||||| || ||||||| |
|
|
| T |
13510 |
ttgaattaaatagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattgaaagaagttagggttaat |
13411 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13410 |
agtcatgcaaa-caattatacaaaaagcaatgaacacaaataattctgaataaagact |
13354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 227266 - 226950
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||| |||||||||||| ||||||| | ||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
227266 |
ttgaattaaacagaattattatttcaggattaaaagctatgattagtagtcattcaattcctaagatcaatttatgtgattgtaagaagctatggttaat |
227167 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagactgaataacattaat-----aataaagagagtatcaactac--a |
193 |
Q |
| |
|
|||||| | || |||| |||| |||||||||||| ||| |||||||||||||||| ||| || |||||| ||||| |||||||| | |
|
|
| T |
227166 |
agtcatgc-aaccaatcatatgaaaagcaatgaataca----------aataaagactgaataatattgataataaaataaaaagagtttcaactactga |
227078 |
T |
 |
| Q |
194 |
ttcatatattacaataggttcatcatggctcaatcaaagggaattagctagacatgattaaataaagaaacaacatagtnnnnnnnntaaaccgatagag |
293 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||| || |||| || ||| || |||||||||||| ||||||||||||| |
|
|
| T |
227077 |
ttcatatattacaataggtttatcatggcccaatcaaagggaattagttaaacat-atcaaaggaataaacaacatagtaaagaaaataaaccgatagag |
226979 |
T |
 |
| Q |
294 |
tttcgtcgatgtcgacgttgctcctcaat |
322 |
Q |
| |
|
||||||| ||||| | || ||||||||| |
|
|
| T |
226978 |
cttcgtcgttgtcggctttactcctcaat |
226950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0401 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0401
Description:
Target: scaffold0401; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4177 - 4021
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |
|
|
| T |
4177 |
ttgaatgaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttaat |
4078 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| | || |||| ||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
4077 |
agtcatgc-aaccaatcatacgaaaaccaatgaacacaaataattctgaataaagact |
4021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1048 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1048
Description:
Target: scaffold1048; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1320 - 1192
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||| |
|
|
| T |
1320 |
ttgaatcaaacagatttactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt-caaaaagctagggttaat |
1222 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaat |
131 |
Q |
| |
|
|||||||| |||||||||||| ||||||||| |
|
|
| T |
1221 |
agtcatac-aagcaattatatgaaaagcaat |
1192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0911 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0911
Description:
Target: scaffold0911; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4481 - 4327
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||| | |
|
|
| T |
4481 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagt |
4382 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
||||||||||| |||| ||| |||||||| | ||||| |||||||||||||||||| |
|
|
| T |
4381 |
agtcatacaaa-caatcataagaaaagcaa--agcacaaataattctgaataaagact |
4327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29240 - 29084
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| | ||||| |
|
|
| T |
29240 |
ttgaattaaacagaattactatttcaggaataaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctaggtttaat |
29141 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| | || |||| |||| |||| | ||||||||| |||||||||||||||||| |
|
|
| T |
29140 |
agtcatgc-aatcaatcatatgaaaatctttgaacacaaataattctgaataaagact |
29084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 53037 - 52881
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaagctaaggttaat |
100 |
Q |
| |
|
|||||| |||||| |||| ||||||| |||| |||| |||||||| |||||||||||||||||| ||||||| |||| |||| ||||||||| | ||||| |
|
|
| T |
53037 |
ttgaattaaacagaattattatttcaagattaaaagatagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctaggattaat |
52938 |
T |
 |
| Q |
101 |
agtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaagact |
158 |
Q |
| |
|
|||||| |||| |||| ||| |||||| ||||||||| |||||||||||||||||| |
|
|
| T |
52937 |
agtcatgcaaa-caatcatacgaaaagctttgaacacaaataattctgaataaagact |
52881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0637
Description:
Target: scaffold0637; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2109 - 2022
Alignment:
| Q |
1 |
ttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattgcaagaa |
88 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||| |||| |||| ||||| |
|
|
| T |
2109 |
ttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcagttcctaagatcaatttatgtgattgaaagaa |
2022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 26843 - 26803
Alignment:
| Q |
281 |
taaaccgatagagtttcgtcgatgtcgacgttgctcctcaa |
321 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26843 |
taaaccgatagagtttcgtcgttgtcgacgttgctcctcaa |
26803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0381 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 5811 - 5858
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacatagt |
272 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||||||| |
|
|
| T |
5811 |
aatcaaaggaaattagctagacatgattaaaataataaacaacatagt |
5858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 62227 - 62183
Alignment:
| Q |
225 |
aatcaaagggaattagctagacatgattaaataaagaaacaacat |
269 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
62227 |
aatcaaaggaaattagctagacatgattaaaataataaacaacat |
62183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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