View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11595_high_2 (Length: 618)
Name: NF11595_high_2
Description: NF11595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11595_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 587; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 21 - 611
Target Start/End: Complemental strand, 45714126 - 45713536
Alignment:
| Q |
21 |
tgactcacttggacttgagctataatgaactcagcggtgagctaccgtccattatgtcgggtgtgcaaagccttgttgggctttacgtgcagaataacaa |
120 |
Q |
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| T |
45714126 |
tgactcacttggacttgagctataatgaactcagcggtgagctaccgtccattatgtcgggtgtgcaaagccttgttgggctttacgtgcagaataacaa |
45714027 |
T |
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| Q |
121 |
gctttcaggccatgttggggagcttttctcaaattccatgacatggaggattgagacaatgaatctaagttgcaattgctttgatggaaacttgccatgg |
220 |
Q |
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| T |
45714026 |
gctttcaggccatgttggggagcttttctcaaattccatgacatggaggattgagacaatgaatctaagttgcaattgctttgatggaaacttgccatgg |
45713927 |
T |
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| Q |
221 |
tctttaggaaatctttcctacttgacgattttggatcttcaccgaaatctgttgactggagagattcctttggaccttgggaatctaatacaacttgttt |
320 |
Q |
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| T |
45713926 |
tctttaggaaatctttcctacttgacgattttggatcttcaccgaaatctgttgactggagagattcctttggaccttgggaatctaatacaacttgttt |
45713827 |
T |
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| Q |
321 |
attttgatgtttcaggcaatcaattatctggaaagattccagagaagttatgcagcctagttaatctaaattaccttgatttctctcaaaacagattgga |
420 |
Q |
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| T |
45713826 |
attttgatgtttcaggcaatcaattatctggaaagattccagagaagttatgcagcctagttaatctaaattaccttgatttctctcaaaacagattgga |
45713727 |
T |
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| Q |
421 |
agggcctattccaataactggtatttgccaaaacctatccgaagttagatttttgggaaacagaaacctttgtgggcagatgttgggtacaaattgtgag |
520 |
Q |
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| T |
45713726 |
agggcctattccaataactggtatttgccaaaacctatccgaagttagatttttgggaaacagaaacctttgtgggcagatgttgggtacaaattgtgag |
45713627 |
T |
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| Q |
521 |
gtcaaaagcattggtagatattcattgtttaatgtatggaggcttggtggaattgccatcgcagtcatattagtaaccttgatctctgctt |
611 |
Q |
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| T |
45713626 |
gtcaaaagcattggtagatattcattgtttaatgtatggaggcttggtggaattgccatcgcagtcatattagtaaccttgatctttgctt |
45713536 |
T |
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