View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11596_low_7 (Length: 412)
Name: NF11596_low_7
Description: NF11596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11596_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 20 - 401
Target Start/End: Original strand, 30605115 - 30605496
Alignment:
| Q |
20 |
taatttttccattaaatgataaatacgtgttggtagtagcaacttcactcaactaaagcagagtctggttagtacaactgaactaactaacaattccctc |
119 |
Q |
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| T |
30605115 |
taatttttccattaaatgataaatacgtgttggtagtagcaacttcactcaactaaagcagagtctggttagtacaactgaactaactaacaattccctc |
30605214 |
T |
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| Q |
120 |
accgcactgcagcagatgggtttttgtccgtgttttggagatgaaacttccgaagttccactagcggatcgtgacccggttctacttgtttcgggtatgg |
219 |
Q |
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| T |
30605215 |
accgcactgcagcagatgggtttttgtccgtgttttggagatgaaacttccgaagttccactagcggatcgtgacccggttctacttgtttcgggtatgg |
30605314 |
T |
|
| Q |
220 |
gtggctccatccttcattctaagcccaagaaattcgggttcaccactcgtgtttgggttagaatctccctcgctgacttggagtttcgtaagaagatttg |
319 |
Q |
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| T |
30605315 |
gtggctccatccttcattctaagcccaagaaattcgggttcaccactcgtgtttgggttagaatctccctcgctgacttggagtttcgtaagaagatttg |
30605414 |
T |
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| Q |
320 |
gtcactctacaatcctgaaacaggtacttactactgttactttctataaacttgttttgagtttccatttatatgcattcat |
401 |
Q |
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| T |
30605415 |
gtcactctacaatcctgaaacaggtacttactactgttactttctataaacttgttttgagtttccatttatatgcattcat |
30605496 |
T |
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