View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11596_low_8 (Length: 401)

Name: NF11596_low_8
Description: NF11596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11596_low_8
NF11596_low_8
[»] chr2 (51 HSPs)
chr2 (64-391)||(3155991-3156318)
chr2 (274-359)||(5539500-5539585)
chr2 (274-360)||(37983961-37984047)
chr2 (277-362)||(18697225-18697310)
chr2 (19-53)||(727288-727322)
chr2 (19-51)||(4014814-4014846)
chr2 (19-51)||(6731637-6731669)
chr2 (19-51)||(9160925-9160957)
chr2 (19-51)||(11061477-11061509)
chr2 (19-51)||(11543800-11543832)
chr2 (19-51)||(13267976-13268008)
chr2 (19-51)||(15920615-15920647)
chr2 (19-51)||(20251486-20251518)
chr2 (19-51)||(24381340-24381372)
chr2 (19-51)||(33607138-33607170)
chr2 (19-51)||(34481672-34481704)
chr2 (19-51)||(34667139-34667171)
chr2 (19-51)||(35476491-35476523)
chr2 (19-51)||(36216754-36216786)
chr2 (19-51)||(36754742-36754774)
chr2 (19-51)||(36755043-36755075)
chr2 (19-51)||(36794899-36794931)
chr2 (19-51)||(39070114-39070146)
chr2 (19-51)||(40812112-40812144)
chr2 (19-51)||(44276358-44276390)
chr2 (19-51)||(44948114-44948146)
chr2 (19-51)||(45049480-45049512)
chr2 (19-53)||(4694993-4695027)
chr2 (21-51)||(12236218-12236248)
chr2 (21-51)||(18778824-18778854)
chr2 (21-51)||(32023350-32023380)
chr2 (274-360)||(32487732-32487818)
chr2 (18-52)||(37644233-37644267)
chr2 (21-51)||(42133442-42133472)
chr2 (22-51)||(7607267-7607296)
chr2 (19-51)||(4772398-4772430)
chr2 (23-51)||(7588965-7588993)
chr2 (19-51)||(10202265-10202297)
chr2 (19-51)||(10392740-10392772)
chr2 (19-51)||(11091587-11091619)
chr2 (19-51)||(13774557-13774589)
chr2 (19-51)||(15897309-15897341)
chr2 (19-51)||(16010614-16010646)
chr2 (19-51)||(19593618-19593650)
chr2 (19-51)||(21840450-21840482)
chr2 (19-51)||(23458775-23458807)
chr2 (19-51)||(23497513-23497545)
chr2 (19-51)||(42007211-42007243)
chr2 (19-51)||(42414600-42414632)
chr2 (19-51)||(43035535-43035567)
chr2 (19-51)||(44887209-44887241)
[»] scaffold0094 (1 HSPs)
scaffold0094 (271-350)||(23744-23823)
[»] chr6 (44 HSPs)
chr6 (275-348)||(14392694-14392767)
chr6 (19-53)||(31205182-31205216)
chr6 (19-51)||(735538-735570)
chr6 (19-51)||(1855101-1855133)
chr6 (21-53)||(2301377-2301409)
chr6 (19-51)||(2959088-2959120)
chr6 (19-51)||(4129040-4129072)
chr6 (19-51)||(4480569-4480601)
chr6 (19-51)||(5660494-5660526)
chr6 (19-51)||(7098901-7098933)
chr6 (19-51)||(8329559-8329591)
chr6 (19-51)||(8448143-8448175)
chr6 (19-51)||(8456947-8456979)
chr6 (19-51)||(8939721-8939753)
chr6 (19-51)||(9062977-9063009)
chr6 (19-51)||(10181140-10181172)
chr6 (19-51)||(10330900-10330932)
chr6 (19-51)||(12795020-12795052)
chr6 (19-51)||(18861768-18861800)
chr6 (19-51)||(23383057-23383089)
chr6 (19-51)||(31444293-31444325)
chr6 (19-51)||(32107836-32107868)
chr6 (21-51)||(659251-659281)
chr6 (21-51)||(1686234-1686264)
chr6 (19-53)||(2395556-2395590)
chr6 (21-51)||(2675292-2675322)
chr6 (19-53)||(6266727-6266761)
chr6 (19-53)||(13507309-13507343)
chr6 (21-51)||(16496652-16496682)
chr6 (283-345)||(17798478-17798540)
chr6 (21-51)||(21513171-21513201)
chr6 (19-52)||(8977250-8977283)
chr6 (19-51)||(1241690-1241722)
chr6 (19-51)||(2314598-2314630)
chr6 (319-359)||(2821241-2821281)
chr6 (19-51)||(4083682-4083714)
chr6 (19-51)||(4996967-4996999)
chr6 (19-51)||(5603448-5603480)
chr6 (19-51)||(5626061-5626093)
chr6 (19-51)||(6453630-6453662)
chr6 (19-51)||(8116747-8116779)
chr6 (19-51)||(25121925-25121957)
chr6 (19-51)||(32643725-32643757)
chr6 (19-51)||(35164606-35164638)
[»] chr5 (74 HSPs)
chr5 (271-360)||(34423966-34424055)
chr5 (19-53)||(4228950-4228984)
chr5 (19-52)||(18115188-18115221)
chr5 (19-51)||(1833320-1833352)
chr5 (19-51)||(4165054-4165086)
chr5 (19-51)||(4874246-4874278)
chr5 (19-51)||(6029707-6029739)
chr5 (19-51)||(6219192-6219224)
chr5 (19-51)||(9640535-9640567)
chr5 (19-51)||(11968871-11968903)
chr5 (19-51)||(12878121-12878153)
chr5 (19-51)||(16496695-16496727)
chr5 (19-51)||(18625616-18625648)
chr5 (19-51)||(20695484-20695516)
chr5 (19-51)||(23074645-23074677)
chr5 (19-51)||(23311174-23311206)
chr5 (19-51)||(24443868-24443900)
chr5 (19-51)||(24652315-24652347)
chr5 (19-51)||(25328305-25328337)
chr5 (19-51)||(26267000-26267032)
chr5 (19-51)||(26802429-26802461)
chr5 (19-51)||(26809979-26810011)
chr5 (19-51)||(26825006-26825038)
chr5 (19-51)||(27389928-27389960)
chr5 (19-51)||(29119701-29119733)
chr5 (19-51)||(29806662-29806694)
chr5 (19-51)||(34856676-34856708)
chr5 (19-51)||(34930320-34930352)
chr5 (19-51)||(36569374-36569406)
chr5 (19-51)||(36790316-36790348)
chr5 (19-51)||(36854159-36854191)
chr5 (19-51)||(37191339-37191371)
chr5 (19-51)||(38683023-38683055)
chr5 (19-51)||(39528025-39528057)
chr5 (19-51)||(40044917-40044949)
chr5 (19-51)||(40318786-40318818)
chr5 (19-51)||(41071157-41071189)
chr5 (19-51)||(41958030-41958062)
chr5 (19-51)||(42448306-42448338)
chr5 (18-53)||(25984370-25984405)
chr5 (21-51)||(9902501-9902531)
chr5 (21-51)||(14808932-14808962)
chr5 (275-341)||(16160074-16160140)
chr5 (21-51)||(17869125-17869155)
chr5 (21-51)||(21728759-21728789)
chr5 (21-51)||(23310495-23310525)
chr5 (19-49)||(37941013-37941043)
chr5 (18-51)||(9716381-9716414)
chr5 (19-52)||(10109895-10109928)
chr5 (19-52)||(13549152-13549185)
chr5 (22-51)||(18474012-18474041)
chr5 (19-52)||(43070684-43070717)
chr5 (19-51)||(671060-671092)
chr5 (19-51)||(1287410-1287442)
chr5 (19-51)||(1650386-1650418)
chr5 (19-51)||(4617767-4617799)
chr5 (19-51)||(6672336-6672368)
chr5 (19-51)||(9053972-9054004)
chr5 (19-51)||(10393503-10393535)
chr5 (19-51)||(12638470-12638502)
chr5 (19-51)||(14126998-14127030)
chr5 (19-51)||(16371473-16371505)
chr5 (19-51)||(16906437-16906469)
chr5 (19-47)||(22963781-22963809)
chr5 (19-51)||(28489279-28489311)
chr5 (19-51)||(29622299-29622331)
chr5 (19-51)||(33617191-33617223)
chr5 (19-51)||(36727082-36727114)
chr5 (19-51)||(37067793-37067825)
chr5 (19-51)||(38975739-38975771)
chr5 (19-51)||(39150927-39150959)
chr5 (19-51)||(40199105-40199137)
chr5 (19-51)||(41562553-41562585)
chr5 (19-51)||(42645464-42645496)
[»] chr8 (59 HSPs)
chr8 (274-362)||(12870438-12870526)
chr8 (19-53)||(27928253-27928287)
chr8 (19-53)||(38070480-38070514)
chr8 (18-51)||(25893945-25893978)
chr8 (18-51)||(43129190-43129223)
chr8 (19-51)||(2442855-2442887)
chr8 (19-51)||(4312228-4312260)
chr8 (19-51)||(4430736-4430768)
chr8 (19-51)||(4977035-4977067)
chr8 (19-51)||(6317395-6317427)
chr8 (19-51)||(6844986-6845018)
chr8 (19-51)||(10096707-10096739)
chr8 (19-51)||(14243794-14243826)
chr8 (19-51)||(16501742-16501774)
chr8 (19-51)||(23681105-23681137)
chr8 (19-51)||(24655069-24655101)
chr8 (19-51)||(25063435-25063467)
chr8 (19-51)||(25199141-25199173)
chr8 (19-51)||(26675652-26675684)
chr8 (19-51)||(26690789-26690821)
chr8 (19-51)||(27544917-27544949)
chr8 (19-51)||(27817450-27817482)
chr8 (19-51)||(27849744-27849776)
chr8 (19-51)||(29158898-29158930)
chr8 (19-51)||(34540065-34540097)
chr8 (19-51)||(34711556-34711588)
chr8 (19-51)||(35421620-35421652)
chr8 (19-51)||(38953481-38953513)
chr8 (19-51)||(40772566-40772598)
chr8 (18-53)||(35222365-35222400)
chr8 (21-51)||(6436780-6436810)
chr8 (283-345)||(25319823-25319885)
chr8 (19-53)||(34143353-34143387)
chr8 (21-51)||(39443098-39443128)
chr8 (19-53)||(39666894-39666928)
chr8 (19-48)||(5704632-5704661)
chr8 (18-51)||(37708448-37708481)
chr8 (18-46)||(1766805-1766833)
chr8 (19-51)||(2733710-2733742)
chr8 (19-51)||(4694682-4694714)
chr8 (19-51)||(10617879-10617911)
chr8 (19-51)||(14188185-14188217)
chr8 (19-51)||(16395468-16395500)
chr8 (19-51)||(17919816-17919848)
chr8 (19-51)||(18040231-18040263)
chr8 (19-51)||(19649499-19649531)
chr8 (19-51)||(20993632-20993664)
chr8 (19-51)||(32922871-32922903)
chr8 (19-51)||(33067391-33067423)
chr8 (19-51)||(34744267-34744299)
chr8 (19-51)||(35497637-35497669)
chr8 (19-51)||(36442401-36442433)
chr8 (19-51)||(36586577-36586609)
chr8 (19-51)||(37295221-37295253)
chr8 (19-51)||(37817471-37817503)
chr8 (19-51)||(39068406-39068438)
chr8 (19-51)||(40744243-40744275)
chr8 (19-51)||(41562539-41562571)
chr8 (19-51)||(44814958-44814990)
[»] chr1 (50 HSPs)
chr1 (274-342)||(24662197-24662265)
chr1 (274-349)||(16587234-16587309)
chr1 (19-53)||(29803172-29803206)
chr1 (19-53)||(45191559-45191593)
chr1 (18-51)||(5790162-5790195)
chr1 (18-51)||(12282708-12282741)
chr1 (19-51)||(270324-270356)
chr1 (19-51)||(301011-301043)
chr1 (19-51)||(8291753-8291785)
chr1 (19-51)||(18089770-18089802)
chr1 (19-51)||(18216566-18216598)
chr1 (19-51)||(19338179-19338211)
chr1 (19-51)||(20164074-20164106)
chr1 (19-51)||(25820951-25820983)
chr1 (19-51)||(27234972-27235004)
chr1 (19-51)||(33845605-33845637)
chr1 (19-51)||(33948341-33948373)
chr1 (19-51)||(36018973-36019005)
chr1 (19-51)||(39606500-39606532)
chr1 (19-51)||(40685624-40685656)
chr1 (19-51)||(40958575-40958607)
chr1 (19-51)||(43025986-43026018)
chr1 (19-51)||(43500144-43500176)
chr1 (19-51)||(43676025-43676057)
chr1 (19-51)||(48392051-48392083)
chr1 (19-51)||(50248124-50248156)
chr1 (21-51)||(10635587-10635617)
chr1 (283-345)||(13113354-13113416)
chr1 (21-51)||(13555724-13555754)
chr1 (21-51)||(38886390-38886420)
chr1 (19-52)||(13980306-13980339)
chr1 (18-51)||(18475200-18475233)
chr1 (19-52)||(30455285-30455318)
chr1 (19-52)||(45007692-45007725)
chr1 (19-51)||(2112842-2112874)
chr1 (19-51)||(4126670-4126702)
chr1 (19-51)||(5598396-5598428)
chr1 (19-51)||(8193963-8193995)
chr1 (19-51)||(13018168-13018200)
chr1 (19-51)||(15906168-15906200)
chr1 (19-51)||(25083121-25083153)
chr1 (19-51)||(35758370-35758402)
chr1 (19-51)||(40809219-40809251)
chr1 (19-51)||(41445031-41445063)
chr1 (19-51)||(43086472-43086504)
chr1 (19-51)||(43907225-43907257)
chr1 (19-51)||(44623019-44623051)
chr1 (19-51)||(45566710-45566742)
chr1 (19-51)||(47429593-47429625)
chr1 (19-51)||(48731757-48731789)
[»] chr4 (72 HSPs)
chr4 (18-53)||(1083602-1083637)
chr4 (19-53)||(9569570-9569604)
chr4 (19-53)||(13632185-13632219)
chr4 (19-53)||(31583602-31583636)
chr4 (19-52)||(34684297-34684330)
chr4 (19-52)||(42411988-42412021)
chr4 (18-51)||(42550423-42550456)
chr4 (19-52)||(48628464-48628497)
chr4 (19-51)||(579243-579275)
chr4 (19-51)||(4379400-4379432)
chr4 (19-51)||(5333207-5333239)
chr4 (19-51)||(6487941-6487973)
chr4 (19-51)||(7512862-7512894)
chr4 (19-51)||(9747266-9747298)
chr4 (19-51)||(12821258-12821290)
chr4 (19-51)||(13389115-13389147)
chr4 (19-51)||(16476938-16476970)
chr4 (19-51)||(18813465-18813497)
chr4 (274-350)||(18991667-18991743)
chr4 (19-51)||(21378381-21378413)
chr4 (19-51)||(23974643-23974675)
chr4 (19-51)||(24550908-24550940)
chr4 (19-51)||(24712183-24712215)
chr4 (19-51)||(25003827-25003859)
chr4 (19-51)||(25698939-25698971)
chr4 (19-51)||(29428150-29428182)
chr4 (19-51)||(30044585-30044617)
chr4 (19-51)||(31263502-31263534)
chr4 (19-51)||(33416581-33416613)
chr4 (19-51)||(34567122-34567154)
chr4 (19-51)||(36526142-36526174)
chr4 (19-51)||(36608095-36608127)
chr4 (19-51)||(36860850-36860882)
chr4 (19-51)||(37050796-37050828)
chr4 (19-51)||(37166233-37166265)
chr4 (19-51)||(42856658-42856690)
chr4 (19-51)||(46488118-46488150)
chr4 (19-51)||(49882710-49882742)
chr4 (19-51)||(50779792-50779824)
chr4 (271-350)||(5786661-5786740)
chr4 (277-356)||(19497761-19497840)
chr4 (21-51)||(3848818-3848848)
chr4 (19-53)||(18371441-18371475)
chr4 (21-51)||(26872209-26872239)
chr4 (21-51)||(34660791-34660821)
chr4 (21-51)||(35828373-35828403)
chr4 (22-51)||(2574027-2574056)
chr4 (18-51)||(3780408-3780441)
chr4 (19-52)||(17481027-17481060)
chr4 (19-52)||(39997773-39997806)
chr4 (18-51)||(54420162-54420195)
chr4 (18-51)||(54907893-54907926)
chr4 (19-51)||(1982656-1982688)
chr4 (19-51)||(5396941-5396973)
chr4 (19-51)||(7944225-7944257)
chr4 (19-51)||(11371061-11371093)
chr4 (19-51)||(12315931-12315963)
chr4 (19-51)||(14285190-14285222)
chr4 (19-51)||(17815144-17815176)
chr4 (19-51)||(25586328-25586360)
chr4 (19-51)||(28010052-28010084)
chr4 (19-51)||(28033287-28033319)
chr4 (19-51)||(28187161-28187193)
chr4 (19-51)||(29894505-29894537)
chr4 (19-51)||(32104011-32104043)
chr4 (19-51)||(33583617-33583649)
chr4 (19-51)||(34123503-34123535)
chr4 (19-51)||(35318635-35318667)
chr4 (19-51)||(36752454-36752486)
chr4 (21-53)||(46553022-46553054)
chr4 (19-51)||(49319826-49319858)
chr4 (19-51)||(51675668-51675700)
[»] scaffold0515 (1 HSPs)
scaffold0515 (19-53)||(2573-2607)
[»] scaffold0306 (1 HSPs)
scaffold0306 (19-53)||(2573-2607)
[»] chr7 (60 HSPs)
chr7 (19-53)||(4227429-4227463)
chr7 (19-53)||(8946523-8946557)
chr7 (19-52)||(10061016-10061049)
chr7 (18-51)||(42653166-42653199)
chr7 (19-51)||(1869911-1869943)
chr7 (19-51)||(2354796-2354828)
chr7 (19-51)||(3497518-3497550)
chr7 (19-51)||(3861337-3861369)
chr7 (19-51)||(4674310-4674342)
chr7 (19-51)||(4887514-4887546)
chr7 (19-51)||(8856370-8856402)
chr7 (19-51)||(12014733-12014765)
chr7 (19-51)||(16816786-16816818)
chr7 (19-51)||(23789416-23789448)
chr7 (19-51)||(28382673-28382705)
chr7 (19-51)||(31717392-31717424)
chr7 (19-51)||(34708767-34708799)
chr7 (19-51)||(35157085-35157117)
chr7 (19-51)||(35376861-35376893)
chr7 (19-51)||(35849390-35849422)
chr7 (19-51)||(38678164-38678196)
chr7 (19-51)||(40011990-40012022)
chr7 (19-51)||(40013359-40013391)
chr7 (19-51)||(40656109-40656141)
chr7 (19-51)||(43723407-43723439)
chr7 (19-51)||(45237025-45237057)
chr7 (19-51)||(46275045-46275077)
chr7 (19-51)||(48612612-48612644)
chr7 (282-349)||(26159302-26159369)
chr7 (19-53)||(6369622-6369656)
chr7 (19-53)||(6378087-6378121)
chr7 (19-53)||(7264500-7264534)
chr7 (21-51)||(9380086-9380116)
chr7 (19-53)||(10166964-10166998)
chr7 (19-53)||(33906378-33906412)
chr7 (19-48)||(11074946-11074975)
chr7 (19-51)||(1323778-1323810)
chr7 (19-51)||(1582619-1582651)
chr7 (19-51)||(4069117-4069149)
chr7 (19-51)||(4106649-4106681)
chr7 (19-51)||(5222576-5222608)
chr7 (19-51)||(5508780-5508812)
chr7 (20-48)||(5841483-5841511)
chr7 (19-51)||(6327306-6327338)
chr7 (19-51)||(10703892-10703924)
chr7 (19-51)||(17895729-17895761)
chr7 (19-51)||(18945019-18945051)
chr7 (19-51)||(19258519-19258551)
chr7 (19-51)||(23138748-23138780)
chr7 (19-51)||(27396315-27396347)
chr7 (19-51)||(29151678-29151710)
chr7 (19-51)||(33512892-33512924)
chr7 (19-51)||(40809140-40809172)
chr7 (19-51)||(43133104-43133136)
chr7 (19-51)||(45041734-45041766)
chr7 (19-51)||(46734117-46734149)
chr7 (19-51)||(47086301-47086333)
chr7 (21-53)||(47182284-47182316)
chr7 (19-51)||(48467905-48467937)
chr7 (19-51)||(48729685-48729717)
[»] chr3 (81 HSPs)
chr3 (19-53)||(11076500-11076534)
chr3 (19-52)||(10071516-10071549)
chr3 (19-52)||(17501022-17501055)
chr3 (18-51)||(22371543-22371576)
chr3 (277-362)||(36730904-36730989)
chr3 (19-51)||(1242312-1242344)
chr3 (19-51)||(2096584-2096616)
chr3 (19-51)||(2666307-2666339)
chr3 (19-51)||(3440821-3440853)
chr3 (19-51)||(3917861-3917893)
chr3 (19-51)||(4232178-4232210)
chr3 (19-51)||(4976709-4976741)
chr3 (19-51)||(5998783-5998815)
chr3 (19-51)||(7552690-7552722)
chr3 (19-51)||(8128291-8128323)
chr3 (19-51)||(8381174-8381206)
chr3 (19-51)||(8508027-8508059)
chr3 (19-51)||(9583424-9583456)
chr3 (19-51)||(10229052-10229084)
chr3 (19-51)||(11029759-11029791)
chr3 (19-51)||(13525264-13525296)
chr3 (19-51)||(13777567-13777599)
chr3 (19-51)||(15003723-15003755)
chr3 (19-51)||(19163729-19163761)
chr3 (19-51)||(24910289-24910321)
chr3 (19-51)||(28170980-28171012)
chr3 (19-51)||(29212064-29212096)
chr3 (19-51)||(30703186-30703218)
chr3 (19-51)||(32960979-32961011)
chr3 (19-51)||(34397775-34397807)
chr3 (19-51)||(34481793-34481825)
chr3 (19-51)||(37312623-37312655)
chr3 (19-51)||(38127843-38127875)
chr3 (19-51)||(38485960-38485992)
chr3 (19-51)||(41464761-41464793)
chr3 (19-51)||(47410753-47410785)
chr3 (19-51)||(48555931-48555963)
chr3 (19-51)||(51112467-51112499)
chr3 (19-51)||(54097442-54097474)
chr3 (319-350)||(32517103-32517134)
chr3 (21-51)||(9610030-9610060)
chr3 (21-51)||(12948906-12948936)
chr3 (277-359)||(12950117-12950199)
chr3 (21-51)||(14868856-14868886)
chr3 (21-51)||(16737987-16738017)
chr3 (21-51)||(24650547-24650577)
chr3 (21-51)||(26764465-26764495)
chr3 (21-51)||(28266624-28266654)
chr3 (19-49)||(43426663-43426693)
chr3 (21-51)||(43605576-43605606)
chr3 (19-48)||(1562888-1562917)
chr3 (19-52)||(19921312-19921345)
chr3 (19-52)||(32597345-32597378)
chr3 (21-50)||(42296808-42296837)
chr3 (19-52)||(46311445-46311478)
chr3 (19-52)||(50238840-50238873)
chr3 (19-47)||(2558842-2558870)
chr3 (19-51)||(2788980-2789012)
chr3 (19-51)||(2900350-2900382)
chr3 (19-51)||(10047967-10047999)
chr3 (19-51)||(10473915-10473947)
chr3 (19-51)||(11056073-11056105)
chr3 (19-51)||(11312687-11312719)
chr3 (19-47)||(21507466-21507494)
chr3 (19-51)||(24273881-24273913)
chr3 (19-51)||(28196985-28197017)
chr3 (19-51)||(30740955-30740987)
chr3 (19-51)||(32591067-32591099)
chr3 (19-51)||(32946354-32946386)
chr3 (19-51)||(35240125-35240157)
chr3 (21-53)||(37124314-37124346)
chr3 (19-51)||(40559769-40559801)
chr3 (19-51)||(40639697-40639729)
chr3 (23-51)||(40840268-40840296)
chr3 (19-51)||(41921592-41921624)
chr3 (19-51)||(44879234-44879266)
chr3 (19-51)||(45475233-45475265)
chr3 (19-51)||(47069102-47069134)
chr3 (19-51)||(52256753-52256785)
chr3 (319-359)||(52344393-52344433)
chr3 (19-51)||(53669712-53669744)
[»] scaffold0244 (1 HSPs)
scaffold0244 (19-52)||(7757-7790)
[»] scaffold0595 (1 HSPs)
scaffold0595 (19-51)||(440-472)
[»] scaffold0402 (1 HSPs)
scaffold0402 (19-51)||(1242-1274)
[»] scaffold0287 (1 HSPs)
scaffold0287 (19-51)||(1059-1091)
[»] scaffold0013 (1 HSPs)
scaffold0013 (19-51)||(90664-90696)
[»] scaffold0778 (1 HSPs)
scaffold0778 (21-51)||(916-946)
[»] scaffold0669 (1 HSPs)
scaffold0669 (21-51)||(7530-7560)
[»] scaffold0024 (1 HSPs)
scaffold0024 (21-51)||(160546-160576)
[»] scaffold0882 (1 HSPs)
scaffold0882 (19-52)||(3697-3730)
[»] scaffold0530 (1 HSPs)
scaffold0530 (19-52)||(8580-8613)
[»] scaffold0122 (1 HSPs)
scaffold0122 (18-51)||(18149-18182)
[»] scaffold1185 (1 HSPs)
scaffold1185 (275-331)||(1719-1775)
[»] scaffold0432 (1 HSPs)
scaffold0432 (21-53)||(9465-9497)
[»] scaffold0008 (1 HSPs)
scaffold0008 (19-51)||(39314-39346)


Alignment Details
Target: chr2 (Bit Score: 300; Significance: 1e-168; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 64 - 391
Target Start/End: Original strand, 3155991 - 3156318
Alignment:
Q  64 aatctctattttaattttaaaataaatgtgcacattcaaatgcttttacttttgttaggagaatacgtaagaaataaagtatttctatattttaacaaac 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3155991 aatctctattttaattttaaaataaatgtgcacattcaaatgcttttacttttgttaggagaatacgtaagaaataaagtatttctatattttaacaaac 3156090  T
Q  164 agtaggaaaaattgatcctgatacaaaaaataatcatcaaaacaaaataattttatcttaagaataaagtgatatagtattgattaagttctatttaaaa 263  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3156091 agtagtaaaaattgatcctgatacaaaaaataatcatcaaaacaaaataattttatcttaagaataaagtgatatagtattgattaagttctatttaaaa 3156190  T
Q  264 ctaacagaaacatattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtcatc 363  Q
    |||||| || ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3156191 ctaacataagcatattccttcaaaggtatctctgtttgtgtggcgcctccttcgcaatagacttcctactagagacaatttggtgcagcggtgtgtcatc 3156290  T
Q  364 cagttacaagattcggtttgtatctctg 391  Q
    ||||||||||||||||||||||||||||    
T  3156291 cagttacaagattcggtttgtatctctg 3156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 5539500 - 5539585
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgt 359  Q
    ||||||||||||||||| ||||||||| |||| ||| |||| ||||| ||||||||||||| |||||||||||||| |||| ||||    
T  5539500 catattccttcaaaggtgtctctgtttgtgtggcgcctcctacgcaacagacttcctactaaagacaatttggtgcggcggagtgt 5539585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 37984047 - 37983961
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtc 360  Q
    ||||||| ||||||||| ||||| ||| |||| ||| | ||||| ||  |||||||||||| |||||||||||||| ||||||||||    
T  37984047 catattctttcaaaggtgtctctatttgtgtggcgcctacttcgaaactgacttcctactaaagacaatttggtgcggcggcgtgtc 37983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 18697310 - 18697225
Alignment:
Q  277 attccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtcat 362  Q
    |||||||||||||| ||| ||||| |||| ||| | |||||||||||| |||| || | |||||  ||||||||||||||||||||    
T  18697310 attccttcaaaggtgtctttgtttctgtggcgccttcttcgcaatagaattccaacaaaagacagcttggtgcagcggcgtgtcat 18697225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 727322 - 727288
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  727322 agtttataatggctttgccatttcgtctatctatc 727288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4014846 - 4014814
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4014846 agtttataatggctttgccatttcgtctatcta 4014814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6731637 - 6731669
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6731637 agtttataatggctttgccatttcgtctatcta 6731669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 9160925 - 9160957
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  9160925 agtttataatggctttgccatttcgtctatcta 9160957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 11061477 - 11061509
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  11061477 agtttataatggctttgccatttcgtctatcta 11061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11543832 - 11543800
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  11543832 agtttataatggctttgccatttcgtctatcta 11543800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 13268008 - 13267976
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  13268008 agtttataatggctttgccatttcgtctatcta 13267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 15920647 - 15920615
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  15920647 agtttataatggctttgccatttcgtctatcta 15920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20251518 - 20251486
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  20251518 agtttataatggctttgccatttcgtctatcta 20251486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 24381340 - 24381372
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24381340 agtttataatggctttgccatttcgtctatcta 24381372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 33607138 - 33607170
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  33607138 agtttataatggctttgccatttcgtctatcta 33607170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34481704 - 34481672
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34481704 agtttataatggctttgccatttcgtctatcta 34481672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34667139 - 34667171
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34667139 agtttataatggctttgccatttcgtctatcta 34667171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35476523 - 35476491
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  35476523 agtttataatggctttgccatttcgtctatcta 35476491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36216786 - 36216754
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36216786 agtttataatggctttgccatttcgtctatcta 36216754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36754774 - 36754742
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36754774 agtttataatggctttgccatttcgtctatcta 36754742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36755043 - 36755075
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36755043 agtttataatggctttgccatttcgtctatcta 36755075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36794899 - 36794931
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36794899 agtttataatggctttgccatttcgtctatcta 36794931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 39070114 - 39070146
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  39070114 agtttataatggctttgccatttcgtctatcta 39070146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40812112 - 40812144
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40812112 agtttataatggctttgccatttcgtctatcta 40812144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 44276358 - 44276390
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  44276358 agtttataatggctttgccatttcgtctatcta 44276390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 44948114 - 44948146
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  44948114 agtttataatggctttgccatttcgtctatcta 44948146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 45049480 - 45049512
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  45049480 agtttataatggctttgccatttcgtctatcta 45049512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 4695027 - 4694993
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||| ||||||||||||||||||    
T  4695027 agtttataatggctttaccatttcgtctatctatc 4694993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 12236218 - 12236248
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  12236218 tttataatggctttgccatttcgtctatcta 12236248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 18778854 - 18778824
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  18778854 tttataatggctttgccatttcgtctatcta 18778824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 32023350 - 32023380
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  32023350 tttataatggctttgccatttcgtctatcta 32023380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 32487818 - 32487732
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtc 360  Q
    ||||||||||||||| | ||||||||| ||||  || |||||||||| | ||||  ||||| ||||||||||| || |||| |||||    
T  32487818 catattccttcaaagttgtctctgtttgtgtggtgcctccttcgcaacaaactttttactaaagacaatttggcgcggcggagtgtc 32487732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 37644267 - 37644233
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| |||||||||||||||||||||||    
T  37644267 aagtttataatagctttgccatttcgtctatctat 37644233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 42133472 - 42133442
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  42133472 tttataatggctttgccatttcgtctatcta 42133442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 7607296 - 7607267
Alignment:
Q  22 ttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||    
T  7607296 ttataatggctttgccatttcgtctatcta 7607267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4772398 - 4772430
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||| ||||||||||||||||||||||||||    
T  4772398 agtttacaatggctttgccatttcgtctatcta 4772430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 7588965 - 7588993
Alignment:
Q  23 tataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||    
T  7588965 tataatggctttgccatttcgtctatcta 7588993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10202265 - 10202297
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  10202265 agtttataatggctttgtcatttcgtctatcta 10202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10392740 - 10392772
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||| |||||||||||||||||||||||||    
T  10392740 agtttattatggctttgccatttcgtctatcta 10392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11091619 - 11091587
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  11091619 agtttataatagctttgccatttcgtctatcta 11091587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13774557 - 13774589
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  13774557 agtttataatggctttcccatttcgtctatcta 13774589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 15897309 - 15897341
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  15897309 agtttataatgcctttgccatttcgtctatcta 15897341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 16010646 - 16010614
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  16010646 agtttataatggctttgtcatttcgtctatcta 16010614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 19593618 - 19593650
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||| ||||||    
T  19593618 agtttataatggctttgccatttcgtttatcta 19593650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 21840482 - 21840450
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  21840482 agtttataatggctttgccatttcttctatcta 21840450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23458775 - 23458807
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||| |||||||||    
T  23458775 agtttataatggctttgccattttgtctatcta 23458807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23497545 - 23497513
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  23497545 agtttataatggctttgtcatttcgtctatcta 23497513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 42007243 - 42007211
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  42007243 agtttataatggctttgctatttcgtctatcta 42007211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 42414600 - 42414632
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  42414600 agtttataatagctttgccatttcgtctatcta 42414632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 43035535 - 43035567
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  43035535 agtttataatggctttaccatttcgtctatcta 43035567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 44887209 - 44887241
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||| |||||    
T  44887209 agtttataatggctttgccatttcgtccatcta 44887241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 23744 - 23823
Alignment:
Q  271 aaacatattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgca 350  Q
    |||||||||||||||||||| ||||| ||| |||| ||| |||||||||| || |||||||| | ||||||| |||||||    
T  23744 aaacatattccttcaaaggtttctctatttgtgtggcgcctccttcgcaacaggcttcctacaaaagacaatctggtgca 23823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 14392767 - 14392694
Alignment:
Q  275 atattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtg 348  Q
    |||||||||||||||| ||||||||| ||||  || ||||||| || |||| |||||||| |||||||||||||    
T  14392767 atattccttcaaaggtgtctctgtttgtgtggtgcctccttcgaaacagacatcctactaaagacaatttggtg 14392694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 31205216 - 31205182
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  31205216 agtttataatggctttgccatttcgtctatctatc 31205182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 735538 - 735570
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  735538 agtttataatggctttgccatttcgtctatcta 735570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1855101 - 1855133
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1855101 agtttataatggctttgccatttcgtctatcta 1855133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 2301409 - 2301377
Alignment:
Q  21 tttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||    
T  2301409 tttataatggctttgccatttcgtctatctatc 2301377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2959088 - 2959120
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  2959088 agtttataatggctttgccatttcgtctatcta 2959120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4129040 - 4129072
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4129040 agtttataatggctttgccatttcgtctatcta 4129072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4480569 - 4480601
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4480569 agtttataatggctttgccatttcgtctatcta 4480601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 5660494 - 5660526
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  5660494 agtttataatggctttgccatttcgtctatcta 5660526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 7098901 - 7098933
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  7098901 agtttataatggctttgccatttcgtctatcta 7098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8329591 - 8329559
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8329591 agtttataatggctttgccatttcgtctatcta 8329559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8448175 - 8448143
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8448175 agtttataatggctttgccatttcgtctatcta 8448143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8456979 - 8456947
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8456979 agtttataatggctttgccatttcgtctatcta 8456947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 8939721 - 8939753
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8939721 agtttataatggctttgccatttcgtctatcta 8939753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9063009 - 9062977
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  9063009 agtttataatggctttgccatttcgtctatcta 9062977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10181140 - 10181172
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  10181140 agtttataatggctttgccatttcgtctatcta 10181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10330900 - 10330932
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  10330900 agtttataatggctttgccatttcgtctatcta 10330932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 12795052 - 12795020
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  12795052 agtttataatggctttgccatttcgtctatcta 12795020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 18861800 - 18861768
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  18861800 agtttataatggctttgccatttcgtctatcta 18861768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23383089 - 23383057
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23383089 agtttataatggctttgccatttcgtctatcta 23383057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 31444325 - 31444293
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  31444325 agtttataatggctttgccatttcgtctatcta 31444293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32107868 - 32107836
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  32107868 agtttataatggctttgccatttcgtctatcta 32107836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 659251 - 659281
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  659251 tttataatggctttgccatttcgtctatcta 659281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 1686264 - 1686234
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  1686264 tttataatggctttgccatttcgtctatcta 1686234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 2395590 - 2395556
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  2395590 agtttataatggctttgtcatttcgtctatctatc 2395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 2675292 - 2675322
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  2675292 tttataatggctttgccatttcgtctatcta 2675322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 6266727 - 6266761
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||| ||||||||||    
T  6266727 agtttataatggctttgccatttcatctatctatc 6266761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 13507343 - 13507309
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||||||||||||| |||||||    
T  13507343 agtttataatggctttgccatttcgtccatctatc 13507309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 16496682 - 16496652
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  16496682 tttataatggctttgccatttcgtctatcta 16496652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 17798540 - 17798478
Alignment:
Q  283 tcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttg 345  Q
    |||||||| ||||||||| |||| ||| ||||||||||| ||||||| ||| ||| |||||||    
T  17798540 tcaaaggtgtctctgtttgtgtggcgcctccttcgcaatcgacttccgactcgaggcaatttg 17798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 21513171 - 21513201
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  21513171 tttataatggctttgccatttcgtctatcta 21513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 8977250 - 8977283
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||||||||| |||||||||||||||||||||    
T  8977250 agtttataatggttttgccatttcgtctatctat 8977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1241690 - 1241722
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||| ||||||||||    
T  1241690 agtttataatggctttgccattccgtctatcta 1241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 2314630 - 2314598
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  2314630 agtttataatgactttgccatttcgtctatcta 2314598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 2821281 - 2821241
Alignment:
Q  319 aatagacttcctactagagacaatttggtgcagcggcgtgt 359  Q
    ||||||||||||||| | ||||||||||||| |||||||||    
T  2821281 aatagacttcctactcgtgacaatttggtgcggcggcgtgt 2821241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4083682 - 4083714
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||| |||||||||    
T  4083682 agtttataatggctttgccattttgtctatcta 4083714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4996967 - 4996999
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  4996967 agtttataatagctttgccatttcgtctatcta 4996999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5603480 - 5603448
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  5603480 agtttataatgactttgccatttcgtctatcta 5603448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5626093 - 5626061
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  5626093 agtttataatggctttaccatttcgtctatcta 5626061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 6453662 - 6453630
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||| |||||||||||||||||||||||||||    
T  6453662 agtttgtaatggctttgccatttcgtctatcta 6453630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8116779 - 8116747
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  8116779 agtttataatagctttgccatttcgtctatcta 8116747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 25121925 - 25121957
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  25121925 agtttataatggctttgtcatttcgtctatcta 25121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32643757 - 32643725
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  32643757 agtttataatggctttaccatttcgtctatcta 32643725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35164638 - 35164606
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  35164638 agtttataatggctttgtcatttcgtctatcta 35164606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 34423966 - 34424055
Alignment:
Q  271 aaacatattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtc 360  Q
    |||||||||||||||||||| ||||||||| |||| ||  | |||||||| |||||||| || | ||| |||||||||| ||||| ||||    
T  34423966 aaacatattccttcaaaggtgtctctgtttgtgtggcgtcttcttcgcaacagacttcccacaaaagataatttggtgcggcggcatgtc 34424055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 4228950 - 4228984
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  4228950 agtttataatggctttgccatttcgtctatctatc 4228984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 18115188 - 18115221
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  18115188 agtttataatggctttgccatttcgtctatctat 18115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1833352 - 1833320
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1833352 agtttataatggctttgccatttcgtctatcta 1833320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4165054 - 4165086
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4165054 agtttataatggctttgccatttcgtctatcta 4165086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4874278 - 4874246
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4874278 agtttataatggctttgccatttcgtctatcta 4874246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6029707 - 6029739
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6029707 agtttataatggctttgccatttcgtctatcta 6029739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 6219224 - 6219192
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6219224 agtttataatggctttgccatttcgtctatcta 6219192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9640567 - 9640535
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  9640567 agtttataatggctttgccatttcgtctatcta 9640535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 11968871 - 11968903
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  11968871 agtttataatggctttgccatttcgtctatcta 11968903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 12878153 - 12878121
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  12878153 agtttataatggctttgccatttcgtctatcta 12878121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16496695 - 16496727
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  16496695 agtttataatggctttgccatttcgtctatcta 16496727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 18625648 - 18625616
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  18625648 agtttataatggctttgccatttcgtctatcta 18625616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20695516 - 20695484
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  20695516 agtttataatggctttgccatttcgtctatcta 20695484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23074677 - 23074645
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23074677 agtttataatggctttgccatttcgtctatcta 23074645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23311206 - 23311174
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23311206 agtttataatggctttgccatttcgtctatcta 23311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 24443900 - 24443868
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24443900 agtttataatggctttgccatttcgtctatcta 24443868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 24652347 - 24652315
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24652347 agtttataatggctttgccatttcgtctatcta 24652315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25328337 - 25328305
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25328337 agtttataatggctttgccatttcgtctatcta 25328305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 26267032 - 26267000
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26267032 agtttataatggctttgccatttcgtctatcta 26267000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 26802429 - 26802461
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26802429 agtttataatggctttgccatttcgtctatcta 26802461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 26809979 - 26810011
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26809979 agtttataatggctttgccatttcgtctatcta 26810011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 26825006 - 26825038
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26825006 agtttataatggctttgccatttcgtctatcta 26825038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27389960 - 27389928
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  27389960 agtttataatggctttgccatttcgtctatcta 27389928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29119701 - 29119733
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  29119701 agtttataatggctttgccatttcgtctatcta 29119733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29806662 - 29806694
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  29806662 agtttataatggctttgccatttcgtctatcta 29806694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34856676 - 34856708
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34856676 agtttataatggctttgccatttcgtctatcta 34856708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34930320 - 34930352
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34930320 agtttataatggctttgccatttcgtctatcta 34930352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36569374 - 36569406
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36569374 agtttataatggctttgccatttcgtctatcta 36569406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36790348 - 36790316
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36790348 agtttataatggctttgccatttcgtctatcta 36790316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36854191 - 36854159
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36854191 agtttataatggctttgccatttcgtctatcta 36854159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37191339 - 37191371
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  37191339 agtttataatggctttgccatttcgtctatcta 37191371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 38683023 - 38683055
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  38683023 agtttataatggctttgccatttcgtctatcta 38683055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 39528025 - 39528057
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  39528025 agtttataatggctttgccatttcgtctatcta 39528057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40044949 - 40044917
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40044949 agtttataatggctttgccatttcgtctatcta 40044917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40318818 - 40318786
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40318818 agtttataatggctttgccatttcgtctatcta 40318786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 41071157 - 41071189
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  41071157 agtttataatggctttgccatttcgtctatcta 41071189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 41958062 - 41958030
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  41958062 agtttataatggctttgccatttcgtctatcta 41958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 42448306 - 42448338
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  42448306 agtttataatggctttgccatttcgtctatcta 42448338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 25984405 - 25984370
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||||||||||||||||| ||||    
T  25984405 aagtttataatggctttgccatttcgtctatttatc 25984370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 9902531 - 9902501
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  9902531 tttataatggctttgccatttcgtctatcta 9902501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 14808932 - 14808962
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  14808932 tttataatggctttgccatttcgtctatcta 14808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 16160074 - 16160140
Alignment:
Q  275 atattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaa 341  Q
    |||| ||||||||||| |||||||| ||||| ||  |||||||||| || |||||||||| ||||||    
T  16160074 atatcccttcaaaggtgtctctgttgttgtggcgtctccttcgcaacaggcttcctactaaagacaa 16160140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 17869155 - 17869125
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  17869155 tttataatggctttgccatttcgtctatcta 17869125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 21728759 - 21728789
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  21728759 tttataatggctttgccatttcgtctatcta 21728789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 23310495 - 23310525
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  23310495 tttataatggctttgccatttcgtctatcta 23310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 37941013 - 37941043
Alignment:
Q  19 agtttataatggctttgccatttcgtctatc 49  Q
    |||||||||||||||||||||||||||||||    
T  37941013 agtttataatggctttgccatttcgtctatc 37941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 9716381 - 9716414
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| |||||||||||||||    
T  9716381 aagtttataatggctttgtcatttcgtctatcta 9716414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 10109928 - 10109895
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||||||||||||||||||||| |||||||||    
T  10109928 agtttataatggctttgccatttcatctatctat 10109895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 13549185 - 13549152
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||| |||||||||||||||||||||||||||    
T  13549185 agtttaaaatggctttgccatttcgtctatctat 13549152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 18474012 - 18474041
Alignment:
Q  22 ttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||    
T  18474012 ttataatggctttgccatttcgtctatcta 18474041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 43070717 - 43070684
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  43070717 agtttataatgactttgccatttcgtctatctat 43070684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 671092 - 671060
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  671092 agtttataatgactttgccatttcgtctatcta 671060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1287410 - 1287442
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||| ||||||||||    
T  1287410 agtttataatggctttgccattacgtctatcta 1287442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1650386 - 1650418
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  1650386 agtttataatggctttgccatttcgcctatcta 1650418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4617799 - 4617767
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||| |||||    
T  4617799 agtttataatggctttgccatttcgtccatcta 4617767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6672336 - 6672368
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  6672336 agtttataatggttttgccatttcgtctatcta 6672368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9054004 - 9053972
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  9054004 agtttataatggctttgtcatttcgtctatcta 9053972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10393535 - 10393503
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  10393535 agtttataatggctttgtcatttcgtctatcta 10393503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 12638502 - 12638470
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  12638502 agtttataatggttttgccatttcgtctatcta 12638470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14126998 - 14127030
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  14126998 agtttataatggctttgtcatttcgtctatcta 14127030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 16371505 - 16371473
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  16371505 agtttataatggctttaccatttcgtctatcta 16371473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16906437 - 16906469
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  16906437 agtttataatggctttgccatttcatctatcta 16906469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 22963781 - 22963809
Alignment:
Q  19 agtttataatggctttgccatttcgtcta 47  Q
    |||||||||||||||||||||||||||||    
T  22963781 agtttataatggctttgccatttcgtcta 22963809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 28489279 - 28489311
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  28489279 agtttataatgactttgccatttcgtctatcta 28489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29622299 - 29622331
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  29622299 agtttataatggctttgctatttcgtctatcta 29622331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 33617191 - 33617223
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||| |||||||||||||||||||||||||    
T  33617191 agtttattatggctttgccatttcgtctatcta 33617223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36727082 - 36727114
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  36727082 agtttataatgactttgccatttcgtctatcta 36727114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37067793 - 37067825
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  37067793 agtttataatgactttgccatttcgtctatcta 37067825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38975771 - 38975739
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  38975771 agtttataatggctttgtcatttcgtctatcta 38975739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 39150959 - 39150927
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  39150959 agtttataatggctttgacatttcgtctatcta 39150927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40199137 - 40199105
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  40199137 agtttataatggttttgccatttcgtctatcta 40199105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 41562553 - 41562585
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||| ||||||    
T  41562553 agtttataatggctttgccatttcgtttatcta 41562585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 42645496 - 42645464
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  42645496 agtttataatggctttgtcatttcgtctatcta 42645464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 12870526 - 12870438
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtcat 362  Q
    ||||||||||||||||| | | ||||| |||||| | ||||||| |||||| | ||||||| |||||| ||||||| |||| |||||||    
T  12870526 catattccttcaaaggtgtttatgtttgtgtgacacctccttcgtaatagattgcctactaaagacaacttggtgcggcggtgtgtcat 12870438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 27928253 - 27928287
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  27928253 agtttataatggctttgccatttcgtctatctatc 27928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 38070514 - 38070480
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  38070514 agtttataatggctttgccatttcgtctatctatc 38070480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 25893945 - 25893978
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  25893945 aagtttataatggctttgccatttcgtctatcta 25893978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43129190 - 43129223
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  43129190 aagtttataatggctttgccatttcgtctatcta 43129223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2442855 - 2442887
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  2442855 agtttataatggctttgccatttcgtctatcta 2442887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4312228 - 4312260
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4312228 agtttataatggctttgccatttcgtctatcta 4312260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4430768 - 4430736
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4430768 agtttataatggctttgccatttcgtctatcta 4430736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4977067 - 4977035
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4977067 agtttataatggctttgccatttcgtctatcta 4977035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6317395 - 6317427
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6317395 agtttataatggctttgccatttcgtctatcta 6317427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 6845018 - 6844986
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6845018 agtttataatggctttgccatttcgtctatcta 6844986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10096707 - 10096739
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  10096707 agtttataatggctttgccatttcgtctatcta 10096739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14243794 - 14243826
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  14243794 agtttataatggctttgccatttcgtctatcta 14243826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16501742 - 16501774
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  16501742 agtttataatggctttgccatttcgtctatcta 16501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23681105 - 23681137
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23681105 agtttataatggctttgccatttcgtctatcta 23681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 24655069 - 24655101
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24655069 agtttataatggctttgccatttcgtctatcta 24655101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 25063435 - 25063467
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25063435 agtttataatggctttgccatttcgtctatcta 25063467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 25199141 - 25199173
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25199141 agtttataatggctttgccatttcgtctatcta 25199173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 26675652 - 26675684
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26675652 agtttataatggctttgccatttcgtctatcta 26675684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 26690789 - 26690821
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  26690789 agtttataatggctttgccatttcgtctatcta 26690821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27544949 - 27544917
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  27544949 agtttataatggctttgccatttcgtctatcta 27544917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27817482 - 27817450
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  27817482 agtttataatggctttgccatttcgtctatcta 27817450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27849776 - 27849744
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  27849776 agtttataatggctttgccatttcgtctatcta 27849744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29158898 - 29158930
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  29158898 agtttataatggctttgccatttcgtctatcta 29158930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34540097 - 34540065
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34540097 agtttataatggctttgccatttcgtctatcta 34540065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34711588 - 34711556
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34711588 agtttataatggctttgccatttcgtctatcta 34711556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35421652 - 35421620
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  35421652 agtttataatggctttgccatttcgtctatcta 35421620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38953513 - 38953481
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  38953513 agtttataatggctttgccatttcgtctatcta 38953481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40772598 - 40772566
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40772598 agtttataatggctttgccatttcgtctatcta 40772566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 35222365 - 35222400
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatctatc 53  Q
    |||||| |||||||||||||||||||||||||||||    
T  35222365 aagtttgtaatggctttgccatttcgtctatctatc 35222400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 6436780 - 6436810
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  6436780 tttataatggctttgccatttcgtctatcta 6436810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 25319885 - 25319823
Alignment:
Q  283 tcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttg 345  Q
    |||||||| ||||||||| |||| ||| ||||||||||| ||||||| ||| ||| |||||||    
T  25319885 tcaaaggtgtctctgtttgtgtggcgcctccttcgcaatcgacttccgactcgaggcaatttg 25319823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 34143387 - 34143353
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||| ||||||||||||||||||||||||    
T  34143387 agtttataatagctttgccatttcgtctatctatc 34143353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 39443128 - 39443098
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  39443128 tttataatggctttgccatttcgtctatcta 39443098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 39666928 - 39666894
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||||||||||||| |||||||    
T  39666928 agtttataatggctttgccatttcgtccatctatc 39666894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 5704661 - 5704632
Alignment:
Q  19 agtttataatggctttgccatttcgtctat 48  Q
    ||||||||||||||||||||||||||||||    
T  5704661 agtttataatggctttgccatttcgtctat 5704632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 37708481 - 37708448
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| |||||||||||||||    
T  37708481 aagtttataatggctttgtcatttcgtctatcta 37708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 1766805 - 1766833
Alignment:
Q  18 aagtttataatggctttgccatttcgtct 46  Q
    |||||||||||||||||||||||||||||    
T  1766805 aagtttataatggctttgccatttcgtct 1766833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2733710 - 2733742
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  2733710 agtttataatagctttgccatttcgtctatcta 2733742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4694714 - 4694682
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||| ||||    
T  4694714 agtttataatggctttgccatttcgtctgtcta 4694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10617879 - 10617911
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  10617879 agtttataatgactttgccatttcgtctatcta 10617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14188185 - 14188217
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  14188185 agtttataatgactttgccatttcgtctatcta 14188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16395468 - 16395500
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  16395468 agtttataatgactttgccatttcgtctatcta 16395500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 17919848 - 17919816
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  17919848 agtttataatggctttgtcatttcgtctatcta 17919816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 18040231 - 18040263
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  18040231 agtttataatggctttaccatttcgtctatcta 18040263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 19649531 - 19649499
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  19649531 agtttataatggctttgtcatttcgtctatcta 19649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 20993632 - 20993664
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  20993632 agtttataatagctttgccatttcgtctatcta 20993664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32922903 - 32922871
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  32922903 agtttataatggctttgtcatttcgtctatcta 32922871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 33067423 - 33067391
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  33067423 agtttataatgactttgccatttcgtctatcta 33067391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34744299 - 34744267
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||| |||||||||    
T  34744299 agtttataatggctttgccattttgtctatcta 34744267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35497669 - 35497637
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||| |||||||||    
T  35497669 agtttataatggctttgccattttgtctatcta 35497637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36442401 - 36442433
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  36442401 agtttataatggctttaccatttcgtctatcta 36442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36586577 - 36586609
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  36586577 agtttataatggctttgtcatttcgtctatcta 36586609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37295221 - 37295253
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  37295221 agtttataatggctttgtcatttcgtctatcta 37295253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37817471 - 37817503
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  37817471 agtttataatggctttgtcatttcgtctatcta 37817503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 39068438 - 39068406
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  39068438 agtttataatggctttgtcatttcgtctatcta 39068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40744275 - 40744243
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  40744275 agtttataatggttttgccatttcgtctatcta 40744243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 41562539 - 41562571
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  41562539 agtttataatggttttgccatttcgtctatcta 41562571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 44814958 - 44814990
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  44814958 agtttataatggctttgccatttcatctatcta 44814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 24662197 - 24662265
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaat 342  Q
    |||||||| ||||||||   ||||||| |||| ||| | ||||||||||||||||||||||||||||||    
T  24662197 catattccatcaaaggtgagtctgtttgtgtggcgccttcttcgcaatagacttcctactagagacaat 24662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 16587234 - 16587309
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgc 349  Q
    |||||||| |||||||| ||||||||| |||| ||| ||||| |||| |||||||||||||  |||| ||||||||    
T  16587234 catattccatcaaaggtgtctctgtttgtgtggcgcctcctttgcaacagacttcctactattgacagtttggtgc 16587309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 29803206 - 29803172
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  29803206 agtttataatggctttgccatttcgtctatctatc 29803172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 45191593 - 45191559
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  45191593 agtttataatggctttgccatttcgtctatctatc 45191559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 5790162 - 5790195
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  5790162 aagtttataatggctttgccatttcgtctatcta 5790195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12282708 - 12282741
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  12282708 aagtttataatggctttgccatttcgtctatcta 12282741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 270356 - 270324
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  270356 agtttataatggctttgccatttcgtctatcta 270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 301011 - 301043
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  301011 agtttataatggctttgccatttcgtctatcta 301043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8291785 - 8291753
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8291785 agtttataatggctttgccatttcgtctatcta 8291753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 18089802 - 18089770
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  18089802 agtttataatggctttgccatttcgtctatcta 18089770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 18216566 - 18216598
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  18216566 agtttataatggctttgccatttcgtctatcta 18216598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 19338211 - 19338179
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  19338211 agtttataatggctttgccatttcgtctatcta 19338179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20164106 - 20164074
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  20164106 agtttataatggctttgccatttcgtctatcta 20164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25820983 - 25820951
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25820983 agtttataatggctttgccatttcgtctatcta 25820951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27235004 - 27234972
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  27235004 agtttataatggctttgccatttcgtctatcta 27234972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 33845637 - 33845605
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  33845637 agtttataatggctttgccatttcgtctatcta 33845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 33948341 - 33948373
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  33948341 agtttataatggctttgccatttcgtctatcta 33948373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36018973 - 36019005
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36018973 agtttataatggctttgccatttcgtctatcta 36019005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 39606500 - 39606532
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  39606500 agtttataatggctttgccatttcgtctatcta 39606532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40685624 - 40685656
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40685624 agtttataatggctttgccatttcgtctatcta 40685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40958607 - 40958575
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40958607 agtttataatggctttgccatttcgtctatcta 40958575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 43025986 - 43026018
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  43025986 agtttataatggctttgccatttcgtctatcta 43026018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 43500176 - 43500144
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  43500176 agtttataatggctttgccatttcgtctatcta 43500144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 43676057 - 43676025
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  43676057 agtttataatggctttgccatttcgtctatcta 43676025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 48392051 - 48392083
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  48392051 agtttataatggctttgccatttcgtctatcta 48392083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 50248124 - 50248156
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  50248124 agtttataatggctttgccatttcgtctatcta 50248156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 10635587 - 10635617
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  10635587 tttataatggctttgccatttcgtctatcta 10635617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 13113354 - 13113416
Alignment:
Q  283 tcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttg 345  Q
    |||||||| ||||||||| |||| ||| ||||||||||| ||||||| ||| ||| |||||||    
T  13113354 tcaaaggtgtctctgtttgtgtggcgcctccttcgcaatcgacttccgactcgaggcaatttg 13113416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 13555754 - 13555724
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  13555754 tttataatggctttgccatttcgtctatcta 13555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 38886420 - 38886390
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  38886420 tttataatggctttgccatttcgtctatcta 38886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 13980339 - 13980306
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||||||| |||||||||||||||||||||||    
T  13980339 agtttataatagctttgccatttcgtctatctat 13980306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 18475200 - 18475233
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| |||||||||    
T  18475200 aagtttataatggctttgccattttgtctatcta 18475233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 30455285 - 30455318
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  30455285 agtttataatgactttgccatttcgtctatctat 30455318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 45007725 - 45007692
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||| ||||||||||||||||    
T  45007725 agtttataatggctttgtcatttcgtctatctat 45007692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2112842 - 2112874
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  2112842 agtttataatggctttgtcatttcgtctatcta 2112874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4126670 - 4126702
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  4126670 agtttataatgcctttgccatttcgtctatcta 4126702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 5598396 - 5598428
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  5598396 agtttataatggctttgtcatttcgtctatcta 5598428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8193995 - 8193963
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  8193995 agtttataatgactttgccatttcgtctatcta 8193963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13018168 - 13018200
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  13018168 agtttataatggctttgtcatttcgtctatcta 13018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 15906200 - 15906168
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  15906200 agtttataatggctttaccatttcgtctatcta 15906168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25083153 - 25083121
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  25083153 agtttataatggctttgtcatttcgtctatcta 25083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35758370 - 35758402
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  35758370 agtttataatggctttaccatttcgtctatcta 35758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40809251 - 40809219
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  40809251 agtttataatggctttgcaatttcgtctatcta 40809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 41445063 - 41445031
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||| |||||||||||||||||||||||||    
T  41445063 agtttattatggctttgccatttcgtctatcta 41445031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 43086504 - 43086472
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  43086504 agtttataatggctttgtcatttcgtctatcta 43086472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 43907257 - 43907225
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  43907257 agtttataatggctttgtcatttcgtctatcta 43907225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 44623051 - 44623019
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  44623051 agtttataatggctttgtcatttcgtctatcta 44623019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 45566742 - 45566710
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  45566742 agtttataatgactttgccatttcgtctatcta 45566710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 47429625 - 47429593
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  47429625 agtttataatggctttgtcatttcgtctatcta 47429593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 48731789 - 48731757
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  48731789 agtttataatggctttgtcatttcgtctatcta 48731757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 1083602 - 1083637
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  1083602 aagtttataatggctttgccatttcgtctatctatc 1083637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 9569570 - 9569604
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  9569570 agtttataatggctttgccatttcgtctatctatc 9569604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 13632185 - 13632219
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  13632185 agtttataatggctttgccatttcgtctatctatc 13632219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 31583636 - 31583602
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  31583636 agtttataatggctttgccatttcgtctatctatc 31583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 34684297 - 34684330
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  34684297 agtttataatggctttgccatttcgtctatctat 34684330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 42412021 - 42411988
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  42412021 agtttataatggctttgccatttcgtctatctat 42411988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 42550456 - 42550423
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  42550456 aagtttataatggctttgccatttcgtctatcta 42550423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 48628497 - 48628464
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  48628497 agtttataatggctttgccatttcgtctatctat 48628464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 579275 - 579243
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  579275 agtttataatggctttgccatttcgtctatcta 579243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4379400 - 4379432
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4379400 agtttataatggctttgccatttcgtctatcta 4379432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5333239 - 5333207
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  5333239 agtttataatggctttgccatttcgtctatcta 5333207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6487941 - 6487973
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  6487941 agtttataatggctttgccatttcgtctatcta 6487973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 7512862 - 7512894
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  7512862 agtttataatggctttgccatttcgtctatcta 7512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9747298 - 9747266
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  9747298 agtttataatggctttgccatttcgtctatcta 9747266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 12821258 - 12821290
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  12821258 agtttataatggctttgccatttcgtctatcta 12821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13389115 - 13389147
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  13389115 agtttataatggctttgccatttcgtctatcta 13389147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 16476970 - 16476938
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  16476970 agtttataatggctttgccatttcgtctatcta 16476938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 18813465 - 18813497
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  18813465 agtttataatggctttgccatttcgtctatcta 18813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 350
Target Start/End: Original strand, 18991667 - 18991743
Alignment:
Q  274 catattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgca 350  Q
    ||||| ||||| ||||| ||||||||  ||||  || ||||||| |||||||||||||||| |||||| ||||||||    
T  18991667 catatcccttctaaggtgtctctgttggtgtggtgcctccttcgtaatagacttcctactaaagacaacttggtgca 18991743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 21378381 - 21378413
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  21378381 agtttataatggctttgccatttcgtctatcta 21378413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23974675 - 23974643
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23974675 agtttataatggctttgccatttcgtctatcta 23974643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 24550908 - 24550940
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24550908 agtttataatggctttgccatttcgtctatcta 24550940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 24712183 - 24712215
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24712183 agtttataatggctttgccatttcgtctatcta 24712215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 25003827 - 25003859
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25003827 agtttataatggctttgccatttcgtctatcta 25003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25698971 - 25698939
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  25698971 agtttataatggctttgccatttcgtctatcta 25698939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29428150 - 29428182
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  29428150 agtttataatggctttgccatttcgtctatcta 29428182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 30044617 - 30044585
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  30044617 agtttataatggctttgccatttcgtctatcta 30044585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 31263534 - 31263502
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  31263534 agtttataatggctttgccatttcgtctatcta 31263502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 33416613 - 33416581
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  33416613 agtttataatggctttgccatttcgtctatcta 33416581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34567122 - 34567154
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34567122 agtttataatggctttgccatttcgtctatcta 34567154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36526174 - 36526142
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36526174 agtttataatggctttgccatttcgtctatcta 36526142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36608095 - 36608127
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36608095 agtttataatggctttgccatttcgtctatcta 36608127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36860882 - 36860850
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  36860882 agtttataatggctttgccatttcgtctatcta 36860850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37050796 - 37050828
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  37050796 agtttataatggctttgccatttcgtctatcta 37050828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37166233 - 37166265
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  37166233 agtttataatggctttgccatttcgtctatcta 37166265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 42856658 - 42856690
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  42856658 agtttataatggctttgccatttcgtctatcta 42856690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 46488150 - 46488118
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  46488150 agtttataatggctttgccatttcgtctatcta 46488118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 49882742 - 49882710
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  49882742 agtttataatggctttgccatttcgtctatcta 49882710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 50779824 - 50779792
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  50779824 agtttataatggctttgccatttcgtctatcta 50779792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 5786740 - 5786661
Alignment:
Q  271 aaacatattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgca 350  Q
    ||||||||||| |||||||| ||| ||||  |||| ||| |||||||||| || |||||||||| ||||||  |||||||    
T  5786740 aaacatattccatcaaaggtttctgtgttggtgtggcgcctccttcgcaacaggcttcctactaaagacaacctggtgca 5786661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 356
Target Start/End: Complemental strand, 19497840 - 19497761
Alignment:
Q  277 attccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcg 356  Q
    |||||||||||||| ||| ||||| |||| ||||| |||||||||||| |||| || | |||||| ||||| || |||||    
T  19497840 attccttcaaaggtgtctttgtttgtgtggcgctttcttcgcaatagaattccaacaaaagacaacttggttcaacggcg 19497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 3848848 - 3848818
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  3848848 tttataatggctttgccatttcgtctatcta 3848818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 18371441 - 18371475
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  18371441 agtttataatggctttgtcatttcgtctatctatc 18371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 26872209 - 26872239
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  26872209 tttataatggctttgccatttcgtctatcta 26872239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 34660821 - 34660791
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  34660821 tttataatggctttgccatttcgtctatcta 34660791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 35828373 - 35828403
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  35828373 tttataatggctttgccatttcgtctatcta 35828403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 2574027 - 2574056
Alignment:
Q  22 ttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||    
T  2574027 ttataatggctttgccatttcgtctatcta 2574056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 3780408 - 3780441
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| |||||||||||||||    
T  3780408 aagtttataatggctttgtcatttcgtctatcta 3780441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 17481027 - 17481060
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||| ||||||||||||||||    
T  17481027 agtttataatggctttgtcatttcgtctatctat 17481060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 39997806 - 39997773
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  39997806 agtttataatgactttgccatttcgtctatctat 39997773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 54420195 - 54420162
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| ||||||||||||||||||||||    
T  54420195 aagtttataatagctttgccatttcgtctatcta 54420162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 54907926 - 54907893
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||| ||||||    
T  54907926 aagtttataatggctttgccatttcgtatatcta 54907893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1982656 - 1982688
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||| |||||||||    
T  1982656 agtttataatggctttgccattttgtctatcta 1982688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5396973 - 5396941
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||| ||||||    
T  5396973 agtttataatggctttgccatttcgtgtatcta 5396941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 7944257 - 7944225
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  7944257 agtttataatggctttgccatttcatctatcta 7944225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11371093 - 11371061
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  11371093 agtttataatgactttgccatttcgtctatcta 11371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 12315963 - 12315931
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  12315963 agtttataatggctttgccatttcatctatcta 12315931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14285190 - 14285222
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  14285190 agtttataatggctttgccatttcatctatcta 14285222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 17815176 - 17815144
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  17815176 agtttataatggctttgccatttcgactatcta 17815144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25586360 - 25586328
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  25586360 agtttataatggctttgtcatttcgtctatcta 25586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 28010084 - 28010052
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  28010084 agtttataatggctttgccatttcatctatcta 28010052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 28033287 - 28033319
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  28033287 agtttataatgactttgccatttcgtctatcta 28033319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 28187193 - 28187161
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  28187193 agtttataatgactttgccatttcgtctatcta 28187161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29894505 - 29894537
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  29894505 agtttataatagctttgccatttcgtctatcta 29894537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32104043 - 32104011
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  32104043 agtttataatggctttgccatttcatctatcta 32104011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 33583649 - 33583617
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||| |||||||||||||||||||||||    
T  33583649 agtttataacggctttgccatttcgtctatcta 33583617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34123503 - 34123535
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  34123503 agtttataatggctttgtcatttcgtctatcta 34123535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35318635 - 35318667
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  35318635 agtttataatggttttgccatttcgtctatcta 35318667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36752454 - 36752486
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  36752454 agtttataatggctttgtcatttcgtctatcta 36752486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 46553022 - 46553054
Alignment:
Q  21 tttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||| ||||||||||||||||||||||    
T  46553022 tttataatggttttgccatttcgtctatctatc 46553054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 49319826 - 49319858
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||| |||||||||||||||||||    
T  49319826 agtttataatggcgttgccatttcgtctatcta 49319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 51675700 - 51675668
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  51675700 agtttataatggctttgtcatttcgtctatcta 51675668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 2573 - 2607
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  2573 agtttataatggctttgccatttcgtctatctatc 2607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 2573 - 2607
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  2573 agtttataatggctttgccatttcgtctatctatc 2607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 4227429 - 4227463
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  4227429 agtttataatggctttgccatttcgtctatctatc 4227463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 8946523 - 8946557
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  8946523 agtttataatggctttgccatttcgtctatctatc 8946557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 10061049 - 10061016
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  10061049 agtttataatggctttgccatttcgtctatctat 10061016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 42653199 - 42653166
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  42653199 aagtttataatggctttgccatttcgtctatcta 42653166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1869911 - 1869943
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1869911 agtttataatggctttgccatttcgtctatcta 1869943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 2354828 - 2354796
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  2354828 agtttataatggctttgccatttcgtctatcta 2354796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 3497550 - 3497518
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  3497550 agtttataatggctttgccatttcgtctatcta 3497518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 3861369 - 3861337
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  3861369 agtttataatggctttgccatttcgtctatcta 3861337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4674342 - 4674310
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4674342 agtttataatggctttgccatttcgtctatcta 4674310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4887546 - 4887514
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4887546 agtttataatggctttgccatttcgtctatcta 4887514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 8856370 - 8856402
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8856370 agtttataatggctttgccatttcgtctatcta 8856402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 12014765 - 12014733
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  12014765 agtttataatggctttgccatttcgtctatcta 12014733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16816786 - 16816818
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  16816786 agtttataatggctttgccatttcgtctatcta 16816818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23789448 - 23789416
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  23789448 agtttataatggctttgccatttcgtctatcta 23789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 28382673 - 28382705
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  28382673 agtttataatggctttgccatttcgtctatcta 28382705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 31717392 - 31717424
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  31717392 agtttataatggctttgccatttcgtctatcta 31717424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34708767 - 34708799
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34708767 agtttataatggctttgccatttcgtctatcta 34708799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35157117 - 35157085
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  35157117 agtttataatggctttgccatttcgtctatcta 35157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 35376893 - 35376861
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  35376893 agtttataatggctttgccatttcgtctatcta 35376861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35849390 - 35849422
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  35849390 agtttataatggctttgccatttcgtctatcta 35849422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38678196 - 38678164
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  38678196 agtttataatggctttgccatttcgtctatcta 38678164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40012022 - 40011990
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40012022 agtttataatggctttgccatttcgtctatcta 40011990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40013359 - 40013391
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40013359 agtttataatggctttgccatttcgtctatcta 40013391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 40656141 - 40656109
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  40656141 agtttataatggctttgccatttcgtctatcta 40656109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 43723407 - 43723439
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  43723407 agtttataatggctttgccatttcgtctatcta 43723439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 45237025 - 45237057
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  45237025 agtttataatggctttgccatttcgtctatcta 45237057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 46275045 - 46275077
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  46275045 agtttataatggctttgccatttcgtctatcta 46275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 48612612 - 48612644
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  48612612 agtttataatggctttgccatttcgtctatcta 48612644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 26159302 - 26159369
Alignment:
Q  282 ttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgc 349  Q
    ||||||||| ||||||||| |||| ||| | ||||| || ||||||||||||| ||| ||||||||||    
T  26159302 ttcaaaggtgtctctgtttgtgtggcgcgttcttcgtaacagacttcctactaaagataatttggtgc 26159369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 6369622 - 6369656
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||| ||||||||||||||||||    
T  6369622 agtttataatggctttaccatttcgtctatctatc 6369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 6378087 - 6378121
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||| ||||||||||||||||||    
T  6378087 agtttataatggctttaccatttcgtctatctatc 6378121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 7264500 - 7264534
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||| |||||||||||||||||||||||    
T  7264500 agtttataatgactttgccatttcgtctatctatc 7264534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 9380086 - 9380116
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  9380086 tttataatggctttgccatttcgtctatcta 9380116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 10166964 - 10166998
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  10166964 agtttataatggctttgtcatttcgtctatctatc 10166998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 33906378 - 33906412
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  33906378 agtttataatggctttgtcatttcgtctatctatc 33906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 11074975 - 11074946
Alignment:
Q  19 agtttataatggctttgccatttcgtctat 48  Q
    ||||||||||||||||||||||||||||||    
T  11074975 agtttataatggctttgccatttcgtctat 11074946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1323778 - 1323810
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  1323778 agtttataatgactttgccatttcgtctatcta 1323810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1582651 - 1582619
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  1582651 agtttataatagctttgccatttcgtctatcta 1582619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4069149 - 4069117
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  4069149 agtttataatggctttgccatttcgcctatcta 4069117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4106649 - 4106681
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  4106649 agtttataatggctttgccatttcatctatcta 4106681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5222608 - 5222576
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  5222608 agtttataatgactttgccatttcgtctatcta 5222576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 5508780 - 5508812
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||| |||||||||||||||||||||||||||    
T  5508780 agtttgtaatggctttgccatttcgtctatcta 5508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 5841511 - 5841483
Alignment:
Q  20 gtttataatggctttgccatttcgtctat 48  Q
    |||||||||||||||||||||||||||||    
T  5841511 gtttataatggctttgccatttcgtctat 5841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 6327306 - 6327338
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  6327306 agtttataatgactttgccatttcgtctatcta 6327338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10703924 - 10703892
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  10703924 agtttataatggctttgtcatttcgtctatcta 10703892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 17895729 - 17895761
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  17895729 agtttataatggctttgtcatttcgtctatcta 17895761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 18945019 - 18945051
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  18945019 agtttataatggctttgccatttcatctatcta 18945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 19258519 - 19258551
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||| ||||    
T  19258519 agtttataatggctttgccatttcgtctttcta 19258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23138748 - 23138780
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  23138748 agtttataatggctttgctatttcgtctatcta 23138780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 27396347 - 27396315
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  27396347 agtttataatggttttgccatttcgtctatcta 27396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 29151678 - 29151710
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  29151678 agtttataatggctttaccatttcgtctatcta 29151710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 33512892 - 33512924
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  33512892 agtttataatggctttgtcatttcgtctatcta 33512924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40809140 - 40809172
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  40809140 agtttataatgactttgccatttcgtctatcta 40809172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 43133136 - 43133104
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  43133136 agtttataatggctttgccatttcgcctatcta 43133104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 45041766 - 45041734
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  45041766 agtttataatgactttgccatttcgtctatcta 45041734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 46734149 - 46734117
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||| ||||||||||    
T  46734149 agtttataatggctttgccattccgtctatcta 46734117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 47086333 - 47086301
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  47086333 agtttataatggctttaccatttcgtctatcta 47086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 47182316 - 47182284
Alignment:
Q  21 tttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||||||||||||||| |||||||||||    
T  47182316 tttataatggctttgccattttgtctatctatc 47182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 48467905 - 48467937
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  48467905 agtttataatggctttgtcatttcgtctatcta 48467937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 48729717 - 48729685
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||| ||||    
T  48729717 agtttataatggctttgccatttcgtctgtcta 48729685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 11076500 - 11076534
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  11076500 agtttataatggctttgccatttcgtctatctatc 11076534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 10071549 - 10071516
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  10071549 agtttataatggctttgccatttcgtctatctat 10071516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 17501022 - 17501055
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  17501022 agtttataatggctttgccatttcgtctatctat 17501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 22371543 - 22371576
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  22371543 aagtttataatggctttgccatttcgtctatcta 22371576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 36730989 - 36730904
Alignment:
Q  277 attccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgtcat 362  Q
    |||||||||||||| ||| ||||| |||| ||| | |||||||||||| |||| || | |||||| |||||||  |||||||||||    
T  36730989 attccttcaaaggtgtctttgtttatgtggcgccttcttcgcaatagaattccaacaaaagacaacttggtgcgacggcgtgtcat 36730904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1242312 - 1242344
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1242312 agtttataatggctttgccatttcgtctatcta 1242344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 2096616 - 2096584
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  2096616 agtttataatggctttgccatttcgtctatcta 2096584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2666307 - 2666339
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  2666307 agtttataatggctttgccatttcgtctatcta 2666339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 3440821 - 3440853
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  3440821 agtttataatggctttgccatttcgtctatcta 3440853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 3917861 - 3917893
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  3917861 agtttataatggctttgccatttcgtctatcta 3917893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4232210 - 4232178
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4232210 agtttataatggctttgccatttcgtctatcta 4232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4976741 - 4976709
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  4976741 agtttataatggctttgccatttcgtctatcta 4976709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 5998815 - 5998783
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  5998815 agtttataatggctttgccatttcgtctatcta 5998783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 7552690 - 7552722
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  7552690 agtttataatggctttgccatttcgtctatcta 7552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 8128323 - 8128291
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8128323 agtttataatggctttgccatttcgtctatcta 8128291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 8381174 - 8381206
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8381174 agtttataatggctttgccatttcgtctatcta 8381206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 8508027 - 8508059
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  8508027 agtttataatggctttgccatttcgtctatcta 8508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9583456 - 9583424
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  9583456 agtttataatggctttgccatttcgtctatcta 9583424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10229052 - 10229084
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  10229052 agtttataatggctttgccatttcgtctatcta 10229084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 11029759 - 11029791
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  11029759 agtttataatggctttgccatttcgtctatcta 11029791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13525264 - 13525296
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  13525264 agtttataatggctttgccatttcgtctatcta 13525296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13777567 - 13777599
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  13777567 agtttataatggctttgccatttcgtctatcta 13777599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 15003723 - 15003755
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  15003723 agtttataatggctttgccatttcgtctatcta 15003755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 19163729 - 19163761
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  19163729 agtttataatggctttgccatttcgtctatcta 19163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 24910321 - 24910289
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  24910321 agtttataatggctttgccatttcgtctatcta 24910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 28171012 - 28170980
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  28171012 agtttataatggctttgccatttcgtctatcta 28170980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 29212096 - 29212064
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  29212096 agtttataatggctttgccatttcgtctatcta 29212064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 30703186 - 30703218
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  30703186 agtttataatggctttgccatttcgtctatcta 30703218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32961011 - 32960979
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  32961011 agtttataatggctttgccatttcgtctatcta 32960979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 34397775 - 34397807
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34397775 agtttataatggctttgccatttcgtctatcta 34397807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34481825 - 34481793
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  34481825 agtttataatggctttgccatttcgtctatcta 34481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 37312623 - 37312655
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  37312623 agtttataatggctttgccatttcgtctatcta 37312655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38127875 - 38127843
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  38127875 agtttataatggctttgccatttcgtctatcta 38127843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38485992 - 38485960
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  38485992 agtttataatggctttgccatttcgtctatcta 38485960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 41464761 - 41464793
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  41464761 agtttataatggctttgccatttcgtctatcta 41464793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 47410785 - 47410753
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  47410785 agtttataatggctttgccatttcgtctatcta 47410753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 48555931 - 48555963
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  48555931 agtttataatggctttgccatttcgtctatcta 48555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 51112499 - 51112467
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  51112499 agtttataatggctttgccatttcgtctatcta 51112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 54097474 - 54097442
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  54097474 agtttataatggctttgccatttcgtctatcta 54097442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 350
Target Start/End: Complemental strand, 32517134 - 32517103
Alignment:
Q  319 aatagacttcctactagagacaatttggtgca 350  Q
    ||||||||||||||||||||||||||||||||    
T  32517134 aatagacttcctactagagacaatttggtgca 32517103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 9610030 - 9610060
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  9610030 tttataatggctttgccatttcgtctatcta 9610060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 12948906 - 12948936
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  12948906 tttataatggctttgccatttcgtctatcta 12948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 12950199 - 12950117
Alignment:
Q  277 attccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttcctactagagacaatttggtgcagcggcgtgt 359  Q
    ||||||| |||||| ||| ||| | |||| ||| | ||||||||||||||||| || | |||||| ||||||| |||||||||    
T  12950199 attcctttaaaggtgtctttgtgtgtgtggcgccttcttcgcaatagacttccaacaaaagacaacttggtgcggcggcgtgt 12950117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 14868886 - 14868856
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  14868886 tttataatggctttgccatttcgtctatcta 14868856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 16738017 - 16737987
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  16738017 tttataatggctttgccatttcgtctatcta 16737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 24650577 - 24650547
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  24650577 tttataatggctttgccatttcgtctatcta 24650547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 26764495 - 26764465
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  26764495 tttataatggctttgccatttcgtctatcta 26764465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 28266624 - 28266654
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  28266624 tttataatggctttgccatttcgtctatcta 28266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 43426663 - 43426693
Alignment:
Q  19 agtttataatggctttgccatttcgtctatc 49  Q
    |||||||||||||||||||||||||||||||    
T  43426663 agtttataatggctttgccatttcgtctatc 43426693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 43605606 - 43605576
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  43605606 tttataatggctttgccatttcgtctatcta 43605576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 1562888 - 1562917
Alignment:
Q  19 agtttataatggctttgccatttcgtctat 48  Q
    ||||||||||||||||||||||||||||||    
T  1562888 agtttataatggctttgccatttcgtctat 1562917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 19921345 - 19921312
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  19921345 agtttataatgactttgccatttcgtctatctat 19921312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 32597378 - 32597345
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||||||||||||| |||||||||||||||||    
T  32597378 agtttataatggctttaccatttcgtctatctat 32597345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 42296808 - 42296837
Alignment:
Q  21 tttataatggctttgccatttcgtctatct 50  Q
    ||||||||||||||||||||||||||||||    
T  42296808 tttataatggctttgccatttcgtctatct 42296837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 46311478 - 46311445
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  46311478 agtttataatgactttgccatttcgtctatctat 46311445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 50238873 - 50238840
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    |||||||||||| |||||||||||||||||||||    
T  50238873 agtttataatggttttgccatttcgtctatctat 50238840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 2558842 - 2558870
Alignment:
Q  19 agtttataatggctttgccatttcgtcta 47  Q
    |||||||||||||||||||||||||||||    
T  2558842 agtttataatggctttgccatttcgtcta 2558870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 2789012 - 2788980
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  2789012 agtttataatggctttgccatttcatctatcta 2788980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 2900350 - 2900382
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||| ||||||||||||||||||||||    
T  2900350 agtttataatagctttgccatttcgtctatcta 2900382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10047967 - 10047999
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  10047967 agtttataatggctttgccatttcgcctatcta 10047999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10473947 - 10473915
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  10473947 agtttataatggctttgccatttcatctatcta 10473915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11056105 - 11056073
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  11056105 agtttataatggctttgtcatttcgtctatcta 11056073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 11312687 - 11312719
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||| |||||||||||||||||||    
T  11312687 agtttataatggcattgccatttcgtctatcta 11312719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 21507494 - 21507466
Alignment:
Q  19 agtttataatggctttgccatttcgtcta 47  Q
    |||||||||||||||||||||||||||||    
T  21507494 agtttataatggctttgccatttcgtcta 21507466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 24273913 - 24273881
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||| ||||    
T  24273913 agtttataatggctttgccatttcgtctttcta 24273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 28197017 - 28196985
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  28197017 agtttataatggctttgcaatttcgtctatcta 28196985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 30740955 - 30740987
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||| ||||||||||||||    
T  30740955 agtttataatggctttgcaatttcgtctatcta 30740987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 32591067 - 32591099
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||| ||||||||||    
T  32591067 agtttataatggctttgccattccgtctatcta 32591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32946386 - 32946354
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  32946386 agtttataatggctttaccatttcgtctatcta 32946354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35240125 - 35240157
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||| ||||||||||||||||||||||||||||    
T  35240125 agttcataatggctttgccatttcgtctatcta 35240157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 37124314 - 37124346
Alignment:
Q  21 tttataatggctttgccatttcgtctatctatc 53  Q
    ||||||||| |||||||||||||||||||||||    
T  37124314 tttataatgactttgccatttcgtctatctatc 37124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40559769 - 40559801
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  40559769 agtttataatggctttgtcatttcgtctatcta 40559801  T

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Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 40639697 - 40639729
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||||||||| |||||||||||||||    
T  40639697 agtttataatggctttgtcatttcgtctatcta 40639729  T

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Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 40840268 - 40840296
Alignment:
Q  23 tataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||    
T  40840268 tataatggctttgccatttcgtctatcta 40840296  T

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Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 41921592 - 41921624
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  41921592 agtttataatggctttgccatttcatctatcta 41921624  T

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Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 44879266 - 44879234
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  44879266 agtttataatggttttgccatttcgtctatcta 44879234  T

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Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 45475265 - 45475233
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  45475265 agtttataatggttttgccatttcgtctatcta 45475233  T

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Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 47069102 - 47069134
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||| ||||||||||||||||||||    
T  47069102 agtttataatggttttgccatttcgtctatcta 47069134  T

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Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 52256785 - 52256753
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    ||||||||||| |||||||||||||||||||||    
T  52256785 agtttataatgactttgccatttcgtctatcta 52256753  T

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Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 52344433 - 52344393
Alignment:
Q  319 aatagacttcctactagagacaatttggtgcagcggcgtgt 359  Q
    ||||||||||||||||||||||| ||||| || ||||||||    
T  52344433 aatagacttcctactagagacaacttggttcatcggcgtgt 52344393  T

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Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 53669744 - 53669712
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||| ||||||||    
T  53669744 agtttataatggctttgccatttcatctatcta 53669712  T

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Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 7790 - 7757
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||||||||||    
T  7790 agtttataatggctttgccatttcgtctatctat 7757  T

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Target: scaffold0595 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 440 - 472
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  440 agtttataatggctttgccatttcgtctatcta 472  T

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Target: scaffold0402 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1274 - 1242
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1274 agtttataatggctttgccatttcgtctatcta 1242  T

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Target: scaffold0287 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1091 - 1059
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  1091 agtttataatggctttgccatttcgtctatcta 1059  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 90664 - 90696
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||||    
T  90664 agtttataatggctttgccatttcgtctatcta 90696  T

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Target: scaffold0778 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 916 - 946
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  916 tttataatggctttgccatttcgtctatcta 946  T

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Target: scaffold0669 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 7530 - 7560
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  7530 tttataatggctttgccatttcgtctatcta 7560  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 160546 - 160576
Alignment:
Q  21 tttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||||||    
T  160546 tttataatggctttgccatttcgtctatcta 160576  T

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Target: scaffold0882 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 3730 - 3697
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  3730 agtttataatgactttgccatttcgtctatctat 3697  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 8613 - 8580
Alignment:
Q  19 agtttataatggctttgccatttcgtctatctat 52  Q
    ||||||||||||||||||||||||||| ||||||    
T  8613 agtttataatggctttgccatttcgtcaatctat 8580  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 18149 - 18182
Alignment:
Q  18 aagtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||||||||||||||| |||||    
T  18149 aagtttataatggctttgccatttcgtcaatcta 18182  T

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Target: scaffold1185 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 1719 - 1775
Alignment:
Q  275 atattccttcaaaggtatctctgtttttgtgacgcttccttcgcaatagacttccta 331  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||| || |||| |||||    
T  1719 atattccttcaaaggtgtctttgtttgtgtgacgcctccttcgaaacagacatccta 1775  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 9465 - 9497
Alignment:
Q  21 tttataatggctttgccatttcgtctatctatc 53  Q
    |||||||||||||||||||||| ||||||||||    
T  9465 tttataatggctttgccatttcatctatctatc 9497  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 39346 - 39314
Alignment:
Q  19 agtttataatggctttgccatttcgtctatcta 51  Q
    |||||||||||||||| ||||||||||||||||    
T  39346 agtttataatggcttttccatttcgtctatcta 39314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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