View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11599_low_46 (Length: 279)

Name: NF11599_low_46
Description: NF11599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11599_low_46
NF11599_low_46
[»] chr2 (28 HSPs)
chr2 (20-279)||(23922147-23922414)
chr2 (1-71)||(34041594-34041664)
chr2 (1-72)||(28846690-28846761)
chr2 (1-72)||(40416396-40416467)
chr2 (1-71)||(39714992-39715062)
chr2 (1-71)||(42327401-42327471)
chr2 (6-73)||(5147690-5147757)
chr2 (1-71)||(29503271-29503341)
chr2 (1-70)||(16918584-16918653)
chr2 (1-67)||(3001383-3001449)
chr2 (8-74)||(4438992-4439058)
chr2 (1-71)||(37480075-37480145)
chr2 (1-71)||(42602554-42602624)
chr2 (4-71)||(7799044-7799111)
chr2 (4-71)||(14500277-14500344)
chr2 (1-71)||(42922414-42922485)
chr2 (1-71)||(19244109-19244179)
chr2 (1-71)||(19322768-19322838)
chr2 (1-51)||(41202270-41202320)
chr2 (1-71)||(45672235-45672305)
chr2 (5-54)||(12994386-12994435)
chr2 (1-50)||(23465927-23465976)
chr2 (5-74)||(42860345-42860414)
chr2 (7-71)||(1729816-1729880)
chr2 (7-51)||(3677365-3677409)
chr2 (1-73)||(11062358-11062430)
chr2 (9-73)||(16381668-16381732)
chr2 (1-37)||(25637185-25637221)
[»] chr4 (37 HSPs)
chr4 (1-73)||(47044715-47044787)
chr4 (1-72)||(37109357-37109428)
chr4 (1-73)||(28635694-28635766)
chr4 (14-72)||(2606435-2606493)
chr4 (1-71)||(7539590-7539660)
chr4 (1-55)||(38869784-38869838)
chr4 (1-71)||(51948480-51948550)
chr4 (1-71)||(55427206-55427276)
chr4 (1-73)||(9241031-9241103)
chr4 (4-72)||(31759667-31759735)
chr4 (1-72)||(19238583-19238654)
chr4 (17-72)||(37443701-37443756)
chr4 (4-74)||(1730498-1730568)
chr4 (5-71)||(8030214-8030280)
chr4 (1-71)||(12798684-12798754)
chr4 (1-51)||(24827845-24827895)
chr4 (1-71)||(39509070-39509140)
chr4 (1-51)||(43728415-43728465)
chr4 (1-51)||(51954134-51954184)
chr4 (5-66)||(26489885-26489946)
chr4 (1-54)||(30938225-30938278)
chr4 (5-73)||(31826607-31826675)
chr4 (1-73)||(33619204-33619276)
chr4 (1-72)||(5795415-5795486)
chr4 (1-36)||(41346969-41347004)
chr4 (1-71)||(4249177-4249247)
chr4 (1-71)||(7949460-7949530)
chr4 (1-71)||(19680794-19680864)
chr4 (5-51)||(21660154-21660200)
chr4 (5-51)||(21668918-21668964)
chr4 (5-71)||(51250532-51250598)
chr4 (26-71)||(27965541-27965586)
chr4 (39-72)||(45060977-45061010)
chr4 (4-73)||(46545709-46545778)
chr4 (1-53)||(16581711-16581763)
chr4 (1-53)||(23377974-23378026)
chr4 (1-72)||(37274465-37274537)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-72)||(41639-41710)
[»] chr8 (27 HSPs)
chr8 (1-72)||(23361655-23361726)
chr8 (1-71)||(16852340-16852410)
chr8 (1-70)||(29858055-29858124)
chr8 (1-73)||(23874388-23874460)
chr8 (1-71)||(968362-968432)
chr8 (3-69)||(2203494-2203560)
chr8 (1-71)||(19703493-19703563)
chr8 (1-69)||(3624582-3624650)
chr8 (4-71)||(5264544-5264611)
chr8 (16-71)||(20994479-20994534)
chr8 (1-71)||(12988428-12988498)
chr8 (1-71)||(18540298-18540368)
chr8 (1-55)||(35690070-35690124)
chr8 (1-71)||(44780120-44780190)
chr8 (1-54)||(18546368-18546421)
chr8 (15-71)||(31381356-31381412)
chr8 (1-72)||(11819775-11819846)
chr8 (1-71)||(4830487-4830557)
chr8 (1-71)||(26688865-26688935)
chr8 (1-71)||(30483890-30483960)
chr8 (1-47)||(31087264-31087310)
chr8 (14-71)||(32157191-32157248)
chr8 (1-53)||(6536538-6536590)
chr8 (15-71)||(6569791-6569847)
chr8 (17-69)||(7286209-7286261)
chr8 (1-69)||(8794351-8794419)
chr8 (1-73)||(27750728-27750800)
[»] chr1 (37 HSPs)
chr1 (1-71)||(25297772-25297842)
chr1 (6-71)||(25494080-25494145)
chr1 (1-73)||(9165201-9165273)
chr1 (1-69)||(33700779-33700847)
chr1 (1-68)||(15786326-15786393)
chr1 (1-72)||(16893393-16893464)
chr1 (5-44)||(17439944-17439983)
chr1 (1-71)||(2799862-2799932)
chr1 (1-55)||(6650611-6650665)
chr1 (1-55)||(8177188-8177242)
chr1 (5-71)||(8904414-8904480)
chr1 (1-47)||(12587294-12587340)
chr1 (1-71)||(19528333-19528403)
chr1 (1-71)||(36371470-36371540)
chr1 (5-71)||(40257399-40257465)
chr1 (4-70)||(44126396-44126462)
chr1 (1-71)||(51814494-51814564)
chr1 (1-50)||(27223136-27223185)
chr1 (7-71)||(31794276-31794340)
chr1 (5-72)||(50901580-50901648)
chr1 (5-72)||(17745266-17745333)
chr1 (1-68)||(24730387-24730454)
chr1 (4-71)||(41508831-41508898)
chr1 (1-72)||(47753713-47753784)
chr1 (1-71)||(521218-521288)
chr1 (1-71)||(4566548-4566618)
chr1 (1-71)||(6122794-6122864)
chr1 (1-71)||(7219924-7219994)
chr1 (5-71)||(12259260-12259326)
chr1 (1-71)||(16169984-16170054)
chr1 (1-71)||(21547486-21547556)
chr1 (1-55)||(52336780-52336834)
chr1 (4-73)||(10526821-10526890)
chr1 (5-73)||(7743335-7743403)
chr1 (17-53)||(20449220-20449256)
chr1 (17-53)||(20534986-20535022)
chr1 (9-53)||(44046162-44046206)
[»] chr7 (33 HSPs)
chr7 (1-73)||(39631842-39631914)
chr7 (1-72)||(26459416-26459487)
chr7 (1-69)||(7744118-7744186)
chr7 (1-72)||(7801179-7801250)
chr7 (1-72)||(22760862-22760933)
chr7 (1-72)||(48771937-48772008)
chr7 (5-71)||(23552118-23552184)
chr7 (1-71)||(25590611-25590681)
chr7 (1-71)||(45709714-45709784)
chr7 (1-66)||(41519270-41519335)
chr7 (1-73)||(18363694-18363766)
chr7 (1-72)||(5579240-5579311)
chr7 (1-72)||(15137552-15137623)
chr7 (5-72)||(25021345-25021412)
chr7 (1-72)||(30442487-30442558)
chr7 (2-73)||(42836008-42836079)
chr7 (1-71)||(17041018-17041088)
chr7 (1-71)||(20335837-20335907)
chr7 (5-71)||(23301612-23301678)
chr7 (1-71)||(23945861-23945931)
chr7 (1-71)||(35119383-35119453)
chr7 (1-71)||(43215184-43215254)
chr7 (1-74)||(24513794-24513867)
chr7 (14-54)||(36803646-36803686)
chr7 (1-51)||(8108601-8108651)
chr7 (5-71)||(23735237-23735303)
chr7 (1-47)||(26703149-26703195)
chr7 (14-71)||(26526290-26526347)
chr7 (3-72)||(37233580-37233649)
chr7 (5-73)||(17113793-17113861)
chr7 (6-70)||(22927477-22927541)
chr7 (4-36)||(25242031-25242063)
chr7 (1-53)||(25655234-25655286)
[»] chr6 (18 HSPs)
chr6 (11-72)||(9433606-9433667)
chr6 (4-71)||(13330087-13330154)
chr6 (1-51)||(11423586-11423636)
chr6 (1-71)||(33549104-33549174)
chr6 (1-72)||(30127399-30127470)
chr6 (9-71)||(12188317-12188379)
chr6 (1-71)||(12234513-12234583)
chr6 (9-51)||(24641204-24641246)
chr6 (1-71)||(31622997-31623067)
chr6 (5-54)||(3715469-3715518)
chr6 (5-70)||(6758432-6758497)
chr6 (9-72)||(1056699-1056762)
chr6 (4-47)||(3172777-3172820)
chr6 (5-67)||(6776617-6776679)
chr6 (1-71)||(12253707-12253777)
chr6 (5-37)||(9626066-9626098)
chr6 (5-69)||(32613150-32613214)
chr6 (31-71)||(34877109-34877149)
[»] chr5 (24 HSPs)
chr5 (4-72)||(14495814-14495882)
chr5 (5-72)||(29075780-29075847)
chr5 (1-71)||(87429-87499)
chr5 (1-51)||(16773827-16773877)
chr5 (1-74)||(17028270-17028343)
chr5 (4-51)||(1410668-1410715)
chr5 (1-72)||(25627056-25627127)
chr5 (1-71)||(21589288-21589358)
chr5 (17-71)||(26598524-26598578)
chr5 (5-71)||(30883208-30883274)
chr5 (1-67)||(37148030-37148096)
chr5 (1-69)||(18596007-18596075)
chr5 (15-71)||(21549157-21549213)
chr5 (1-72)||(6844728-6844799)
chr5 (5-67)||(12883844-12883906)
chr5 (1-71)||(14285161-14285231)
chr5 (1-71)||(26078057-26078127)
chr5 (1-71)||(30109314-30109384)
chr5 (1-71)||(34984806-34984876)
chr5 (1-67)||(43241688-43241754)
chr5 (1-74)||(7918475-7918548)
chr5 (1-33)||(4793094-4793126)
chr5 (1-37)||(30000150-30000186)
chr5 (1-53)||(43442214-43442266)
[»] chr3 (44 HSPs)
chr3 (3-51)||(4844519-4844567)
chr3 (3-51)||(4870215-4870263)
chr3 (1-72)||(51903884-51903955)
chr3 (1-71)||(10499115-10499185)
chr3 (1-71)||(10828739-10828809)
chr3 (1-71)||(30311306-30311376)
chr3 (1-71)||(31520611-31520681)
chr3 (9-71)||(31788984-31789046)
chr3 (1-71)||(46518628-46518698)
chr3 (1-73)||(10445145-10445218)
chr3 (1-70)||(47454623-47454692)
chr3 (1-64)||(2667869-2667932)
chr3 (1-72)||(14186647-14186717)
chr3 (1-72)||(14339609-14339680)
chr3 (14-73)||(28928898-28928957)
chr3 (5-72)||(35111179-35111246)
chr3 (5-72)||(40063618-40063685)
chr3 (1-71)||(4222141-4222211)
chr3 (5-71)||(8051214-8051280)
chr3 (1-71)||(27093367-27093437)
chr3 (1-71)||(36720381-36720451)
chr3 (1-71)||(37788471-37788541)
chr3 (7-48)||(28531070-28531111)
chr3 (1-37)||(44743861-44743897)
chr3 (1-73)||(49494152-49494224)
chr3 (1-68)||(30510205-30510272)
chr3 (1-68)||(39253701-39253767)
chr3 (21-71)||(203090-203140)
chr3 (1-71)||(2597226-2597296)
chr3 (9-55)||(2709393-2709439)
chr3 (1-71)||(5499413-5499483)
chr3 (1-55)||(7975434-7975488)
chr3 (1-71)||(11642215-11642285)
chr3 (1-47)||(13808891-13808937)
chr3 (1-71)||(15048067-15048137)
chr3 (1-71)||(16354898-16354968)
chr3 (13-71)||(26988996-26989053)
chr3 (1-71)||(34104520-34104590)
chr3 (4-66)||(34928950-34929012)
chr3 (1-50)||(38550410-38550459)
chr3 (1-73)||(13164765-13164837)
chr3 (4-36)||(31608533-31608565)
chr3 (1-29)||(45308908-45308936)
chr3 (1-37)||(52769989-52770025)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-51)||(11548-11598)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-71)||(15329-15399)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-71)||(42526-42596)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-68)||(94977-95044)
scaffold0002 (1-73)||(142151-142223)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-55)||(19968-20022)
[»] scaffold0086 (1 HSPs)
scaffold0086 (14-71)||(47382-47439)
[»] scaffold0361 (1 HSPs)
scaffold0361 (4-71)||(5233-5299)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-72)||(19857-19924)
[»] scaffold1367 (1 HSPs)
scaffold1367 (1-51)||(846-896)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-51)||(2476-2526)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-51)||(13052-13102)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-72)||(61668-61725)
[»] scaffold0021 (1 HSPs)
scaffold0021 (8-64)||(157000-157056)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 279
Target Start/End: Original strand, 23922147 - 23922414
Alignment:
Q  20 gagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatccagaaagatacttgaatttcatgttttcattgatcgaccacgatt 119  Q
    |||||||||  ||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23922147 gagcatactttcaggtcccaagtcaataccactaggtcaatccaaatgggttatccagaaagatacttgaatttcatgttttcattgatcgaccatgatt 23922246  T
Q  120 tttatatcaatgtaagatga--------agatcgcttccacttataaatacatgttcagaaattagaccttatatcattcaatgtgacacgcttaacgcc 211  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  23922247 tttatatcaatgtaagatgaagatatgaagatcgcttccacttataaatacatgttcagaaattagatcttatattattcaatgtgacatgcttaacgcc 23922346  T
Q  212 cgcgtcaaaatgaaatttgtgtcaaaaaacaatggattcttaaggaggatgataacccaattattatt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23922347 cgcgtcaaaatgaaatttgtgtcaaaaaacaatggattcttaaggaggatgagaacccaattattatt 23922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34041594 - 34041664
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28846761 - 28846690
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||| |||| | ||||||||||    
T  28846761 aacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40416396 - 40416467
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||  ||||||||||||||||||| | | ||||||||||||||||| ||| ||||||||||||    
T  40416396 aacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39715062 - 39714992
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||||||| | | ||| |||||||||||    
T  39715062 aacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42327401 - 42327471
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  42327401 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 5147690 - 5147757
Alignment:
Q  6 gagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||||| ||| |||||||||||||||||||  ||||||||||||||||  ||| |||||||||||||    
T  5147690 gagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttat 5147757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29503341 - 29503271
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||| ||| ||  ||||||||||||| ||| |||||||||||    
T  29503341 aacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16918584 - 16918653
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    ||||| |||||| ||||||||||| |||||||||||| ||  ||||||||||||| ||| ||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3001449 - 3001383
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtg 67  Q
    ||||||||| ||| |||||||||| ||||| |||||  ||||||||||||||||| ||| |||||||    
T  3001449 aacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4438992 - 4439058
Alignment:
Q  8 gacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    ||||| ||||||||||| |||| ||||||| |||| ||||||| |||| ||| ||||||||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttatc 4439058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37480145 - 37480075
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||| ||| ||| ||| ||||||||| ||| ||| |||||||||||    
T  37480145 aacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42602624 - 42602554
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| ||| ||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  42602624 aacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 7799044 - 7799111
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||  ||| ||| ||||||||| ||| ||| |||||||||||    
T  7799044 ctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14500344 - 14500277
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| ||||||||||| |||||||||||  |||   ||||||||||| ||| |||||||||||    
T  14500344 ctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42922485 - 42922414
Alignment:
Q  1 aacctgagacctc-gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||  ||||||||||| |||||||| | | ||| ||||||||||||| ||| |||||||||||    
T  42922485 aacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19244179 - 19244109
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| | ||||||||| |||| ||| ||| |||||||||||| |||  ||| |||||||||||    
T  19244179 aacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19322838 - 19322768
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||| ||||||| || |||||||| |||||||| ||| ||  |||||||||||| |||| |||||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41202320 - 41202270
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||| |||| |||||||||||||||||||||||||  | |||||||||||    
T  41202320 aacctaagacttcgaggaggagcatactcccagatctcaggtcaataccac 41202270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45672235 - 45672305
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| |||||||| |||||||| || ||  ||| ||| ||||| ||| |||||||||||||||    
T  45672235 aacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaatccaagtgggtt 45672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 12994386 - 12994435
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactag 54  Q
    ||||||||  |||||||||| |||||||| ||| ||||||||||||||||    
T  12994386 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccactag 12994435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23465927 - 23465976
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaatacca 50  Q
    |||||||||| | ||||||||||||||||||| |||||||  ||||||||    
T  23465927 aacctgagactttgaggaggagcatactcccaaatcctaaaccaatacca 23465976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 42860414 - 42860345
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    |||||||||||||||||||| |||||||| ||  ||||||||| ||| ||| |||  ||||| |||||||    
T  42860414 tgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggttatc 42860345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 1729880 - 1729816
Alignment:
Q  7 agacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||| ||||||||||| |||||||  ||| ||| ||||||||||||  ||| |||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3677365 - 3677409
Alignment:
Q  7 agacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||||||||||| |||||||||  |||||||||| |||||||||    
T  3677365 agacctcgaggagaagcatactcttagatcctaagccaataccac 3677409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11062430 - 11062358
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||| |||||| |||| |||||||  | | ||| ||||| ||||||| ||| |||||||||||||    
T  11062430 aacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttat 11062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 16381668 - 16381732
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||| ||||||||| | |||| ||||||| ||| | ||||||||||| ||| |||||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggttat 16381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25637221 - 25637185
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcc 37  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  25637221 aacctgagacctcgagaaggagcacactcccagatcc 25637185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47044787 - 47044715
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||| |||||||||||||||||    
T  47044787 aacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37109357 - 37109428
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| |||||||| ||| ||| ||||||||||||| ||| ||||||||||||    
T  37109357 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28635766 - 28635694
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||| ||||||| |||||||||| |||||||||||| |||||| |||||| ||| ||| |||||||||||||    
T  28635766 aacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 2606493 - 2606435
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||||| ||||||||||    
T  2606493 gaggaggagcatactcacagatcctaaaccaataccactaggccaatctaagtgggtta 2606435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7539660 - 7539590
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||| |||||||||||||||||||| || |||||||||||||  ||||| || ||||||    
T  7539660 aacctgagaccttgagaaggagcatactcccagatccaaaatcaataccactagaccaatctaaatgggtt 7539590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38869838 - 38869784
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    |||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||    
T  38869838 aacctgagaccttgaggaggagcacactcccagatcccaagccaataccactagg 38869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 51948550 - 51948480
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||| ||| ||||| |||||| |||||||||| || ||| ||| |||||||||||    
T  51948550 aacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 55427206 - 55427276
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||| ||||||| |||||||| ||| ||| ||||||||| ||| ||| |||||||||||    
T  55427206 aacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9241031 - 9241103
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||| ||||||||| ||| ||| |||||||||||||    
T  9241031 aacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 31759667 - 31759735
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||| ||||||||||| |||||||  ||| ||| |||||||||||| |||| ||||||||||||    
T  31759667 ctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19238583 - 19238654
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||| ||||||||||||||||||| |||||||  ||| ||| ||||||||| ||| ||| ||||||||||||    
T  19238583 aacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 37443756 - 37443701
Alignment:
Q  17 gaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||| | |||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 1730498 - 1730568
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    ||||||| | || |||||||| |||| ||| ||| ||| ||||||||||||||||| ||||||||||||||    
T  1730498 ctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggttatc 1730568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 8030214 - 8030280
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| ||||||||||| |||||||  ||| ||| | ||||||||||| |||||||||||||||    
T  8030214 tgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12798754 - 12798684
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| ||||||||||| |||| |||||||||||  ||  |||||||||| |||||| |||||||||||    
T  12798754 aacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtt 12798684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24827895 - 24827845
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||||||||||  |||||||| ||| |||||||||||||    
T  24827895 aacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccac 24827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39509140 - 39509070
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||||||| ||| || |||||  ||  ||| |||||||||||    
T  39509140 aacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43728465 - 43728415
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||| | ||||||||||| ||||||||||| ||||||||||||||    
T  43728465 aacctgagactttgaggaggagcacactcccagatcataagtcaataccac 43728415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51954184 - 51954134
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||| ||||    
T  51954184 aacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccac 51954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 26489885 - 26489946
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagt 66  Q
    ||||| |||||||| ||||| |||| ||| ||| ||||||||||||| ||||||||||||||    
T  26489885 tgagatctcgaggaagagcacactctcaggtccaaagtcaataccaccaggtcaatccaagt 26489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30938225 - 30938278
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactag 54  Q
    |||||||||||||||||||||||| ||||| |||||| ||  ||||||||||||    
T  30938225 aacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31826675 - 31826607
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||| ||||||||||| |||| || |||| ||| | ||||||||||| ||| |||||||||||||    
T  31826675 tgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggttat 31826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33619276 - 33619204
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||| ||||||| ||||||| ||  ||||||||||||||| ||||||||| | | ||| |||||||||||||    
T  33619276 aacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggttat 33619204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5795415 - 5795486
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||||||||| || | | ||||||| ||||| ||  ||| ||||||||||||    
T  5795415 aacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggtta 5795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41346969 - 41347004
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatc 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  41346969 aacctgagacttcgaggaggagcatactcccagatc 41347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4249247 - 4249177
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||| | |||| ||| | ||||||||||| ||| | |||||||||    
T  4249247 aacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7949460 - 7949530
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| ||||||| ||||| ||  |||||||||||    
T  7949460 aacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19680794 - 19680864
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| ||||| ||||| |||||||  ||| |||  |||||||||||| |||||||||||||||    
T  19680794 aacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 21660154 - 21660200
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||||    
T  21660154 tgagacctcgaggaagagcacactcccagatctcaagtcaataccac 21660200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 21668918 - 21668964
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||||    
T  21668918 tgagacctcgaggaagagcacactcccagatctcaagtcaataccac 21668964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 51250532 - 51250598
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| || |||| |||||| |||||||||||| ||| ||||||||| ||| ||| |||||||||||    
T  51250532 tgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 27965541 - 27965586
Alignment:
Q  26 actcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||| ||||||||||||| ||| |||||||||||    
T  27965541 actcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 45061010 - 45060977
Alignment:
Q  39 aagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||||||||||| ||||||||||||    
T  45061010 aagtcaataccactaggtcaacccaagtgggtta 45060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 46545778 - 46545709
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||| || ||||||||||| |||| ||| ||  ||| ||||||||||||| ||| |||||||||||||    
T  46545778 ctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16581763 - 16581711
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||||| ||||||||||| |||||||| | | ||| |||||||||||    
T  16581763 aacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23378026 - 23377974
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||||| ||||||||||| |||||||| ||| ||| ||||| |||||    
T  23378026 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37274465 - 37274537
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaa-taccactaggtcaatccaagtgggtta 72  Q
    ||||| |||||| ||||||||||| |||||||| ||| ||| ||| ||| |||||| ||| ||||||||||||    
T  37274465 aacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41639 - 41710
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||| ||||||||||||    
T  41639 aacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23361655 - 23361726
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| ||||||| |||| ||||||||||||| ||||||| ||||||||||||    
T  23361655 aacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16852410 - 16852340
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  16852410 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29858055 - 29858124
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    |||||||||||||||||||||||| |||||| | ||| ||| ||||||||| ||| ||||||||||||||    
T  29858055 aacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23874388 - 23874460
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||||||||||| ||| | |||||| ||| ||| ||||||||||||| ||| |||||||||||||    
T  23874388 aacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggttat 23874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 968432 - 968362
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||| |||  ||||||||||    
T  968432 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 2203560 - 2203494
Alignment:
Q  3 cctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||||| ||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19703493 - 19703563
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||| ||| ||| ||| ||||||||||||| ||| |||||||||||    
T  19703493 aacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3624650 - 3624582
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||||||| || |||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||    
T  3624650 aacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5264611 - 5264544
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||||||||||| | |||||| | | ||| ||||||||||||| ||| |||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  16 ggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| |||||||| ||| ||||||||||||||||| ||| |||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12988498 - 12988428
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| |||| ||||||||||| ||| |||| | | ||| ||||||||||||| |||||||||||||||    
T  12988498 aacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18540368 - 18540298
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| |||||| || | |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  18540368 aacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35690070 - 35690124
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    |||||||||||| ||||||||||| || ||||||||| ||| |||||||||||||    
T  35690070 aacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactagg 35690124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44780120 - 44780190
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||  ||| ||| |||| |||||||| ||| |||||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18546368 - 18546421
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactag 54  Q
    ||||||||||||||||||||||||| ||| ||| ||| || |||||||||||||    
T  18546368 aacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactag 18546421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 31381412 - 31381356
Alignment:
Q  15 aggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| ||| |||||| | ||||||||||||||| ||||||||| |||||||    
T  31381412 aggaggagcacacttccagattccaagtcaataccactatgtcaatccaggtgggtt 31381356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11819846 - 11819775
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| |||||||  ||| ||| | ||||||||||| ||| |||| |||||||    
T  11819846 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtta 11819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4830557 - 4830487
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||||||||||| || |||| ||||||| ||   |||||||| ||| ||| |||||||||||    
T  4830557 aacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26688935 - 26688865
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| ||| ||||| ||| ||| |||||||||||    
T  26688935 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30483890 - 30483960
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||   ||||||||||| ||||||| |||| ||| |||||||||| || ||| |||||||||||    
T  30483890 aacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31087264 - 31087310
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaata 47  Q
    |||||||||||||||||||| | |||||||||||||| ||| |||||    
T  31087264 aacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 32157248 - 32157191
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||||||| || ||| ||||||||||||| ||| ||| |||| ||||||    
T  32157248 gaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6536590 - 6536538
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| |||||||||||    
T  6536590 aacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  15 aggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| |||||||||||| ||| ||||| ||||||| ||| | |||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 7286261 - 7286209
Alignment:
Q  17 gaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||| |||||||||||| ||  ||||||||||||||||| | |||||||    
T  7286261 gaggagcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8794351 - 8794419
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||||||  ||||||||||| ||| |||| | | ||| ||||||||||| | |||||||||||||    
T  8794351 aacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27750800 - 27750728
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||| ||||||||||| |||||||  ||| ||| | ||||||| ||| ||| |||| ||||||||    
T  27750800 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggttat 27750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25297842 - 25297772
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||  ||| |||||||||||    
T  25297842 aacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 25494080 - 25494145
Alignment:
Q  6 gagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||| |||| ||||| |||||| ||| |||||||||||||||||| ||||||||||    
T  25494080 gagacctcgaggagaagcaaactcctagatcccaagccaataccactaggtcaattcaagtgggtt 25494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9165201 - 9165273
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||| | ||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||||    
T  9165201 aacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33700779 - 33700847
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||||||| ||||||||||| |||||||||| | ||| ||||||||||||| ||| |||||||||    
T  33700779 aacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15786326 - 15786393
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgg 68  Q
    |||||||||||| ||||||||||| |||||||||||| ||| |||||| |||||  ||| ||||||||    
T  15786326 aacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16893464 - 16893393
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||||||||||||| | ||||||| |||  ||| ||||||||  ||||||| ||||||||||||    
T  16893464 aacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 17439983 - 17439944
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtca 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17439983 tgagacctcgaggaggagcacactcccagatcctaagtca 17439944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2799932 - 2799862
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||||||  ||| | ||||||||||| ||| | |||||||||    
T  2799932 aacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6650665 - 6650611
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    |||||||||| | |||||||||||||||||| ||||| ||| |||||||||||||    
T  6650665 aacctgagacattgaggaggagcatactccccgatcccaagccaataccactagg 6650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8177188 - 8177242
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    ||||||| |||| ||||||||||| |||||||||||| ||| |||||||||||||    
T  8177188 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactagg 8177242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 8904480 - 8904414
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| ||||||||||| |||| || |||| |||||||||| |||||| ||| |||||||||||    
T  8904480 tgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12587340 - 12587294
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaata 47  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||    
T  12587340 aacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19528333 - 19528403
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||  |||||| ||| ||||||||| ||| ||| |||||||||||    
T  19528333 aacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36371540 - 36371470
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| ||||||||||| |||||||| | | ||| ||||||||||||| ||| |||||||||||    
T  36371540 aacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 40257465 - 40257399
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||| |||||||| ||  ||| ||||||||| ||| ||| |||||||||||    
T  40257465 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 44126462 - 44126396
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    ||||||||||| ||||||||| |||||||| ||| | ||||||||||| ||| ||| ||||||||||    
T  44126462 ctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 51814564 - 51814494
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||| ||||||  ||||||||||||  ||| ||| |||||||||||    
T  51814564 aacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27223136 - 27223185
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaatacca 50  Q
    |||||||||||| || || ||||| |||||||||||||||||||||||||    
T  27223136 aacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  7 agacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||| ||||||||||| |||||||  ||| ||| ||||||||||||| ||| |||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 50901648 - 50901580
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaa-taccactaggtcaatccaagtgggtta 72  Q
    |||||||||||||||||||| ||| |||| ||| ||| ||| |||||||||| ||| ||||||||||||    
T  50901648 tgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 17745266 - 17745333
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||||||||||| || | ||| ||| ||| ||||||||||||| ||| ||||||| ||||    
T  17745266 tgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24730454 - 24730387
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgg 68  Q
    |||||| ||||| || |||||||| |||||||||||  ||| ||||||||||||| ||| ||||||||    
T  24730454 aacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 41508898 - 41508831
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| ||||||||||| |||||||||||| ||  || |||||| ||| ||| |||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47753784 - 47753713
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| | ||| |||||| |||||||||| || ||||||| | || |||||||    
T  47753784 aacctgagaccttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacctaaatgggtta 47753713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 521288 - 521218
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| |  |||||||||| || |||| |||  ||||||||| || ||||||||||||||||||||    
T  521288 aacctgagactttaaggaggagcacacccccaaatctcaagtcaatatcagtaggtcaatccaagtgggtt 521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4566618 - 4566548
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||  ||||||||||| |||||||| | | ||| ||||| ||||||| ||| |||||||||||    
T  4566618 aacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6122864 - 6122794
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||  ||| ||| | ||||||||||| ||| |||| ||||||    
T  6122864 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7219924 - 7219994
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| ||||||||||||| |||| ||  ||| | |||||||||||| |||||||| |||| ||||    
T  7219924 aacctgagacttcgaggaggagcacactctcatgtcccaggtcaataccactgggtcaatcaaagtaggtt 7219994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 12259326 - 12259260
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||| ||||||||||||| ||||||| |||| |||| |||| ||||| | ||| |||||||||||    
T  12259326 tgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16169984 - 16170054
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| |||| |||||||| || |||||||| ||| ||||||||||||| |||  || |||||||||||    
T  16169984 aacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21547486 - 21547556
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| ||||||||||||||||  ||||||  ||| ||| ||||||||||||| ||| |||||| ||||    
T  21547486 aacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52336780 - 52336834
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    ||||||||| ||  |||||||||| |||||||||||| ||| |||||||||||||    
T  52336780 aacctgagatcttaaggaggagcacactcccagatcccaagccaataccactagg 52336834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 10526890 - 10526821
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||||||| ||||||||||| |||||||| ||| ||| |||||||||| |  ||| |||| ||||||||    
T  10526890 ctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggttat 10526821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 7743335 - 7743403
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||| |||||||| || ||||||| || |  ||| |||||||||||| ||| |||||||||||||    
T  7743335 tgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggttat 7743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20449220 - 20449256
Alignment:
Q  17 gaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||| |||||||||| |||||||||||||||    
T  20449220 gaggagcataatcccagatcccaagtcaataccacta 20449256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20534986 - 20535022
Alignment:
Q  17 gaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||| |||||||||| |||||||||||||||    
T  20534986 gaggagcataatcccagatcccaagtcaataccacta 20535022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 44046162 - 44046206
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||| ||||||||||| |||||||||||| ||| |||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39631914 - 39631842
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||| |||||||||| ||||||||| ||| ||| ||||||||||||| ||| |||||||||||||    
T  39631914 aacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26459416 - 26459487
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| |||||||| ||| ||| ||||||||||||| ||| ||||||||||||    
T  26459416 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7744118 - 7744186
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    |||||||||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| | |||||||    
T  7744118 aacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7801250 - 7801179
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| || |||||||| |||||||| ||| ||||||||||||| ||| ||| ||||||||||||    
T  7801250 aacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22760933 - 22760862
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||  ||| ||||||||||||    
T  22760933 aacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48772008 - 48771937
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||| |||||||||| |||||||||||| ||| ||||||||| | | ||| ||||||||||||    
T  48772008 aacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 23552184 - 23552118
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| ||||||||||| |||||||| ||| ||||||||| ||||||| ||| |||||||||||    
T  23552184 tgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25590681 - 25590611
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||| ||||||||||||||||||| |||||||||||  ||| ||||||||  ||||||| |||||||||||    
T  25590681 aacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45709714 - 45709784
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||| ||||||| |||  |||||||||||| ||| |||| ||||||    
T  45709714 aacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41519270 - 41519335
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagt 66  Q
    |||||||||||| ||||||||||| ||||| | |||| ||||||||||||||||| ||| ||||||    
T  41519270 aacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18363766 - 18363694
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||| ||||||||||| ||||||| |||  ||| | ||||||||||| ||| |||||||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttat 18363694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5579240 - 5579311
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| ||| ||||| ||||||| ||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtta 5579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15137623 - 15137552
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| ||||| | |||| |||||| |||||| ||| ||| ||||||||||||    
T  15137623 aacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||| | ||||||||||| |||||||| ||| ||| ||||||||||||| ||| ||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30442558 - 30442487
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||| |||||| ||||||||||| |||||||| ||| ||| |||||||||| || ||| ||||||||||||    
T  30442558 aacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 42836008 - 42836079
Alignment:
Q  2 acctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||||| ||| ||||| ||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 42836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17041018 - 17041088
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||| |||||||| ||| |||| |||||||  ||| |||||||||||    
T  17041018 aacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20335837 - 20335907
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||  ||| ||| ||||||| ||||  ||| |||||||||||    
T  20335837 aacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 23301612 - 23301678
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| |||||||||| |||||||  ||| ||||||||||||| ||| ||| |||||||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23945931 - 23945861
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||| | |||||||| | || ||| | |||||||||||||| |||||||| |||||||||||    
T  23945931 aacctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggtt 23945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35119453 - 35119383
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| | || ||||| |||||||| ||||||||| ||||||||||||||||| ||| |||| ||||||    
T  35119453 aacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43215254 - 43215184
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| ||||||||||||  ||| |||||||||||    
T  43215254 aacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24513867 - 24513794
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    ||||||||||||| ||||| || | ||||||| |||  ||| ||||||||||||| ||| ||||||||||||||    
T  24513867 aacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggttatc 24513794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 36803646 - 36803686
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactag 54  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  36803646 gaggaggagcatactcccaggtcccaagtcaataccactag 36803686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8108651 - 8108601
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||||||||||| |||||||||  ||||||| |||| |||||||||||||    
T  8108651 aacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccac 8108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 23735237 - 23735303
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||| | ||||||||||| | ||||| || ||||| |||||||||||| |||| |||||||||||    
T  23735237 tgagactttgaggaggagcacaatcccaaattctaagccaataccactagatcaacccaagtgggtt 23735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26703195 - 26703149
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaata 47  Q
    |||||||||||||||| ||||||| |||||||||||| ||| |||||    
T  26703195 aacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 26526347 - 26526290
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||| |||| || |||||||||||||||||| ||  |||||||| ||||||    
T  26526347 gaggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggtt 26526290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 37233580 - 37233649
Alignment:
Q  3 cctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||  |||||||||| ||||||| |||| ||| ||||| ||| | ||||| ||||||||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtta 37233649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 17113861 - 17113793
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||| |||||| |||| |||||||| | ||||| |||||| |||||| ||  |||||||||||||    
T  17113861 tgagaccttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggttat 17113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 22927541 - 22927477
Alignment:
Q  6 gagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    |||||||  ||||| |||| ||||| |||||| |||| |||||||||||| ||| ||||||||||    
T  22927541 gagacctttaggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 25242063 - 25242031
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatc 36  Q
    |||||||||||||||||||||||||| ||||||    
T  25242063 ctgagacctcgaggaggagcatactctcagatc 25242031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25655234 - 25655286
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    ||||||| |||| |||||||| || |||| ||||||| |||||||||||||||    
T  25655234 aacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccacta 25655286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 9433606 - 9433667
Alignment:
Q  11 ctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||| ||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  9433606 ctcgaggaagagcacactcccagatcccaagtcaataccacagggtcaatccaagtgggtta 9433667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 13330154 - 13330087
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| |||||||||| ||||||||  | | ||||||||||||||||||||| |||||||||||    
T  13330154 ctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggtcaacccaagtgggtt 13330087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11423636 - 11423586
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  11423636 aacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccac 11423586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33549174 - 33549104
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||  ||| |||||||||||    
T  33549174 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30127470 - 30127399
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||||| |||||||| ||||||||| || ||| ||||||||| ||  ||| ||||||||||||    
T  30127470 aacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 12188317 - 12188379
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||| ||||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12234513 - 12234583
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||||||  |||||| |||||||| ||| ||||||||||||| ||| ||| | |||||||||    
T  12234513 aacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 24641204 - 24641246
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaataccac 24641246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31622997 - 31623067
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||| |||||||||  |  ||| |||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3715518 - 3715469
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactag 54  Q
    ||||||||||| ||| ||||||||||||||||  ||||||||||||||||    
T  3715518 tgagacctcgacgagaagcatactcccagatctcaagtcaataccactag 3715469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6758432 - 6758497
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    ||||||||||||| |||||| ||||||| |||||||| ||||||||| ||| |||  |||||||||    
T  6758432 tgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 1056699 - 1056762
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||| ||||| |||||||||||||  ||| | | ||||||||||||||||| ||||||||||||    
T  1056699 accttgaggatgagcatactcccaagtcccaggccaataccactaggtcaacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 3172777 - 3172820
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaata 47  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||    
T  3172777 ctgagacctcgatgaggagcatactcccaggtcccaagtcaata 3172820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 6776617 - 6776679
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtg 67  Q
    |||||| ||||||||||||| || ||||||||| ||| ||||||||| ||| ||| |||||||    
T  6776617 tgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12253777 - 12253707
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| |||||| ||||| |||| |||||||||| ||| ||||  ||||||| |||||||||||    
T  12253777 aacctaagaccttgaggagcagcatgctccaagatcctaagccaacaccatcaggtcaacccaagtgggtt 12253707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 9626098 - 9626066
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcc 37  Q
    |||||||||||||||||||||||||| ||||||    
T  9626098 tgagacctcgaggaggagcatactcctagatcc 9626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 32613150 - 32613214
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    ||||| || ||| ||||||| ||||||||| || ||||||||||||| ||| ||| |||||||||    
T  32613150 tgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 34877109 - 34877149
Alignment:
Q  31 cagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||| ||||||||||| ||| |||||||||||    
T  34877109 cagatcctaagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 14495814 - 14495882
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||  ||| |||| |||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 29075847 - 29075780
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||| |||||||||||||| |||||||||||| ||| |||||||||||||  || ||||||||||||    
T  29075847 tgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 87429 - 87499
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||||| | ||| ||||||||||||| ||| | |||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16773877 - 16773827
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  16773877 aacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 16773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17028270 - 17028343
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    |||||||||||| ||||||||||| |||||||  ||| ||  |||||| |||||||||| ||||||||||||||    
T  17028270 aacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggttatc 17028343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 1410668 - 1410715
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccac 1410715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25627127 - 25627056
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| |||||||  | | ||| ||||||||||||| ||| ||||||||||||    
T  25627127 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21589358 - 21589288
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| |||||||| |||| |||||||| ||| ||| ||||||||| ||| ||| |||||||||||    
T  21589358 aacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 26598578 - 26598524
Alignment:
Q  17 gaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| |||| ||||||| ||| ||||||||||||| |||||||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggtt 26598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 30883208 - 30883274
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| ||||||||||| |||||||| ||| ||| ||||||||||||  ||| |||||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37148096 - 37148030
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtg 67  Q
    |||||||||||| ||||||||||| |||| ||| ||  | ||||||||||||| |||||||||||||    
T  37148096 aacctgagaccttgaggaggagcacactcacaggtctcaggtcaataccactaagtcaatccaagtg 37148030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18596007 - 18596075
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtggg 69  Q
    ||||| |||||| ||||||||||| | |||||| ||  ||| |||||||||||| ||||||||||||||    
T  18596007 aacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  15 aggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||| |||||||| ||| ||| ||||||||||||| ||| |||||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6844799 - 6844728
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||| ||||||||||||||| || ||||||| || | |||||||||||||  || ||| ||||||||||||    
T  6844799 aaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 12883906 - 12883844
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtg 67  Q
    ||||||||| |||||||||| |||||||||||| ||   |||||||  |||||||||||||||    
T  12883906 tgagacctcaaggaggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14285231 - 14285161
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||| | | ||| |||| ||||| || ||| |||||||||||    
T  14285231 aacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26078057 - 26078127
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| || ||| ||||||||||||  ||| ||  ||||||||||||| ||| |||||||||||    
T  26078057 aacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30109314 - 30109384
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||| |||||||||| |||||||| ||  ||| ||||||||| | | ||| |||||||||||    
T  30109314 aacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34984876 - 34984806
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| ||||||||||| |||||||| | | ||| ||||||||||||  ||| |||||||||||    
T  34984876 aacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43241688 - 43241754
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtg 67  Q
    ||||||||||||| |||| | ||| ||||| |||||| ||||||||||||||||  ||| |||||||    
T  43241688 aacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7918475 - 7918548
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttatc 74  Q
    ||||| |||||| |||||||||   |||||||| | | ||| ||||||||||||| ||| ||||||||||||||    
T  7918475 aacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggttatc 7918548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4793094 - 4793126
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccag 4793126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30000186 - 30000150
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcc 37  Q
    |||||||||||||||||||| |||||||||| |||||    
T  30000186 aacctgagacctcgaggaggtgcatactcccggatcc 30000150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43442266 - 43442214
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccacta 53  Q
    |||||||||||| ||||||||||| |||||||||||  ||  |||||||||||    
T  43442266 aacctgagaccttgaggaggagcacactcccagatctcaaaccaataccacta 43442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 4844519 - 4844567
Alignment:
Q  3 cctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  4844519 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccac 4844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 4870215 - 4870263
Alignment:
Q  3 cctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  4870215 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccac 4870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51903884 - 51903955
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||||| |||||||||||| |||||||||||| ||| ||||||||  ||||||| ||| ||||||||    
T  51903884 aacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10499115 - 10499185
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||| |||| ||||| |||||||||||| ||| ||||||||| ||| ||| |||||||||||    
T  10499115 aacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10828739 - 10828809
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||  || |||||||||||||||| ||||||| ||||| ||||||||||  |||||||||||    
T  10828739 aacctgagaccttaagtaggagcatactcccaggtcctaagacaatatcactaggtcagcccaagtgggtt 10828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30311376 - 30311306
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||||||| ||| | ||||||||||| ||| ||| |||||||    
T  30311376 aacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31520611 - 31520681
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||||||||||||||| |||||||||||| ||| |||| |||| ||| ||| |||||||||||    
T  31520611 aacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||| |||||||||||| ||| ||||| ||||||| ||| |||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46518698 - 46518628
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| |||| ||||||||||| |||||||||||| ||| ||||||||||| | ||| |||||||||||    
T  46518698 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10445145 - 10445218
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaa-taccactaggtcaatccaagtgggttat 73  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||| | |||||||| ||| |||||||||||||    
T  10445145 aacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggttat 10445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47454623 - 47454692
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggt 70  Q
    |||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||  ||| ||||||||||    
T  47454623 aacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2667932 - 2667869
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaa 64  Q
    |||||||||||||||||| ||||| |||||||||||| ||| ||||||||| ||| ||| ||||    
T  2667932 aacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14186717 - 14186647
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||| ||||||||||| ||||| || ||| ||| ||||||||||||| ||| ||||||||||||    
T  14186717 aacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14339680 - 14339609
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||| | ||||||||||| ||||||| |||| ||| ||||||||| ||| |||||||| |||||||    
T  14339680 aacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 28928898 - 28928957
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||||||||| |||| ||||||| ||| ||||||||||||| |||||||||||| ||||    
T  28928898 gaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtggattat 28928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 35111246 - 35111179
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    |||||||||||||| ||||| |||||||| ||  || ||||| |||||||| ||||||||||||||||    
T  35111246 tgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtta 35111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 40063685 - 40063618
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||  ||||||||||||||| ||||||| ||| |||||| |||| ||||| ||||||||||||    
T  40063685 tgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtta 40063618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4222211 - 4222141
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||| | ||||||||||| |||||||||||| ||| ||||||||||| | ||| |||||||||||    
T  4222211 aacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 8051280 - 8051214
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||||| |||||||| |||| ||| ||| ||||||||| ||| ||| |||||||||||    
T  8051280 tgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27093367 - 27093437
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| |||||||  | | ||| ||||||||||||| ||| |||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36720451 - 36720381
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||| |||||||||||||||| ||||||| |||| ||| ||||||||| ||  ||| |||||||||||    
T  36720451 aacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37788471 - 37788541
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| ||||| || | | |||||||||||||| || ||| |||||||||||    
T  37788471 aacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 28531070 - 28531111
Alignment:
Q  7 agacctcgaggaggagcatactcccagatcctaagtcaatac 48  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  28531070 agacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44743861 - 44743897
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44743861 aacctgagacctcgaggaggagcacactcccagatcc 44743897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49494152 - 49494224
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    |||||||||||||||||| ||||| ||||||| ||   |||||||||||||||||  || ||||||| |||||    
T  49494152 aacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagttat 49494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30510205 - 30510272
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgg 68  Q
    |||||||||||||||| ||||||||||||| || ||| ||| || |||||| ||| ||| ||||||||    
T  30510205 aacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39253767 - 39253701
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgg 68  Q
    |||||||||||| || |||||||| |||||||||||| ||||| | ||||||||||||| | ||||||    
T  39253767 aacctgagaccttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtgg 39253701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 203140 - 203090
Alignment:
Q  21 agcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||| |||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  203140 agcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2597226 - 2597296
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||||| |||||||||| ||||| | |||| ||| ||||||||| ||  ||| |||||||||||    
T  2597226 aacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 2709439 - 2709393
Alignment:
Q  9 acctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    |||||||||||||||||||| |||||||| ||  |||||||||||||    
T  2709439 acctcgaggaggagcatacttccagatcccaacacaataccactagg 2709393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5499413 - 5499483
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| ||||||  |||||||||| |||| ||||||  ||||||||||||| ||| ||| |||||||||||    
T  5499413 aaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7975488 - 7975434
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    ||||| |||||| ||||||||||| |||||||||||| ||| | |||||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactagg 7975434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11642215 - 11642285
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| |||||||| || | || ||||||| ||||  |||||| |||| |||||||||||||||    
T  11642215 aacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13808891 - 13808937
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaata 47  Q
    |||||||||||| ||||||||||| ||| |||||||| |||||||||    
T  13808891 aacctgagacctagaggaggagcacactgccagatcccaagtcaata 13808937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15048067 - 15048137
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| ||||||||||| | |||||||||| ||| | |||||| || | ||| |||||||||||    
T  15048067 aacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16354898 - 16354968
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||  ||||||||||| |||| ||| | | ||| ||||||||||||| ||| |||||||||||    
T  16354898 aacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 26989053 - 26988996
Alignment:
Q  13 cgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||| |||| ||||||| ||| ||||||||||||| ||| |||||||||||    
T  26989053 cgaggaggagcaaactctcagatcc-aagccaataccactaggccaacccaagtgggtt 26988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34104520 - 34104590
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||| |||||| ||  ||||||||||| |||||| |||||| ||||||| | |||||| |||||||||||    
T  34104520 aacctcagaccttgataaggagcatactaccagattctaagttaataccattgggtcaacccaagtgggtt 34104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 34928950 - 34929012
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagt 66  Q
    |||||||||  ||||||||||||||| ||| ||||||||| ||| |||||| |||| ||||||    
T  34928950 ctgagaccttaaggaggagcatactctcaggtcctaagtccatatcactagatcaacccaagt 34929012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38550410 - 38550459
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaatacca 50  Q
    ||||| ||||||| |||||||||| ||||||| | |||||||||||||||    
T  38550410 aacctcagacctcaaggaggagcacactcccaaaccctaagtcaatacca 38550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13164765 - 13164837
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||| |||||| |||||| |||| ||||| || ||| ||| ||| ||||| ||||||||| |||||||||||    
T  13164765 aacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggttat 13164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 31608533 - 31608565
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatc 36  Q
    ||||||||||||||||||||| |||||||||||    
T  31608533 ctgagacctcgaggaggagcacactcccagatc 31608565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 45308908 - 45308936
Alignment:
Q  1 aacctgagacctcgaggaggagcatactc 29  Q
    |||||||||||||||||||||||||||||    
T  45308908 aacctgagacctcgaggaggagcatactc 45308936  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52769989 - 52770025
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcc 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  52769989 aacctgagacctcaaggaggagcacactcccagatcc 52770025  T

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Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11598 - 11548
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  11598 aacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

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Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15329 - 15399
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||  ||| |||||||||||    
T  15329 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

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Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42526 - 42596
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||||   |||||||||||||||||||||| | ||||||||||||||||| ||| |||| ||||||    
T  42526 aacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 94977 - 95044
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgg 68  Q
    |||||||||||| ||||||||||| |||||||| | | ||| ||||||||||||| ||| ||||||||    
T  94977 aacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 142223 - 142151
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggttat 73  Q
    ||||| |||||| |||||| |||| ||||| || ||| ||| ||| ||||| ||||||||| |||||||||||    
T  142223 aacctaagaccttgaggagtagcacactccaaggtccaaagccaacaccaccaggtcaatcaaagtgggttat 142151  T

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Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19968 - 20022
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccactagg 55  Q
    |||||||||||| |||||||||||||||||||| | | ||| |||||||||||||    
T  19968 aacctgagaccttgaggaggagcatactcccaggttccaagccaataccactagg 20022  T

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Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 47439 - 47382
Alignment:
Q  14 gaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    |||||||| ||||||||||||||||||| ||||||||| |||  || |||||||||||    
T  47439 gaggaggaacatactcccagatcctaagccaataccacaaggcaaacccaagtgggtt 47382  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5299 - 5233
Alignment:
Q  4 ctgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtt 71  Q
    ||||||||| ||| ||||||| ||||||| || ||||||||||||||| || |||| |||||||||||    
T  5299 ctgagaccttgag-aggagcacactcccatattctaagtcaataccaccagatcaacccaagtgggtt 5233  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 19857 - 19924
Alignment:
Q  5 tgagacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||||| |||||||||| |||||||||||| ||| ||||||||  | | |||| |||||||||||    
T  19857 tgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtta 19924  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 846 - 896
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||| ||||||||||||| | |||||||||| ||| |||||||||    
T  846 aacctgagacttcgaggaggagcacattcccagatcccaagccaataccac 896  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2476 - 2526
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||| ||||||||||| |||||||||||| ||  |||||||||    
T  2476 aacctgagaccttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13052 - 13102
Alignment:
Q  1 aacctgagacctcgaggaggagcatactcccagatcctaagtcaataccac 51  Q
    |||||||||||| ||||||||||| |||||||||||  ||| |||||||||    
T  13052 aacctgagaccttgaggaggagcacactcccagatctcaagccaataccac 13102  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 61668 - 61725
Alignment:
Q  15 aggaggagcatactcccagatcctaagtcaataccactaggtcaatccaagtgggtta 72  Q
    ||||||| ||||||||||| ||| ||| |||||||||||| |||| ||| ||||||||    
T  61668 aggaggaccatactcccaggtcccaagccaataccactagatcaacccatgtgggtta 61725  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 157000 - 157056
Alignment:
Q  8 gacctcgaggaggagcatactcccagatcctaagtcaataccactaggtcaatccaa 64  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||  ||||||| ||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

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