View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11599_low_47 (Length: 269)
Name: NF11599_low_47
Description: NF11599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11599_low_47 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 9 - 269
Target Start/End: Original strand, 2035126 - 2035386
Alignment:
| Q |
9 |
atgaagcataaatgtgatgtaacatagatcaaggtgttaatttatagtaatttataacttgtatgttactaaaaaatgaggatataagttatcatnnnnn |
108 |
Q |
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| T |
2035126 |
atgaagcataaatgtgatgtaacatagatcaaggtgttaatttatagtaattcataacttgtatgttactaaaaaacgaggatataagttatcataaaaa |
2035225 |
T |
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| Q |
109 |
nntcagttgagcaataaatttagatgcaatgtgtatctaaatgaagtaaaaaagaaaataccacatggaaacaagagacagttaaaatgtaagttctggc |
208 |
Q |
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| T |
2035226 |
aatcatttgagcaataaatttagatgcaatgtgtatctaaatgaagtaaaaaagaaaataccacatggaaacaagagacagttaaaatgtaagttctggc |
2035325 |
T |
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| Q |
209 |
cctacattgattgtttagattactttatttagatgaaacaagattaatttaagcatatgtt |
269 |
Q |
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| T |
2035326 |
cctacattgattgtttagattactttatttagatgaaacaagattaatttaagcatatgtt |
2035386 |
T |
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