View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11599_low_54 (Length: 252)
Name: NF11599_low_54
Description: NF11599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11599_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 31525933 - 31526151
Alignment:
| Q |
20 |
tagctgctgtggtttgaggtctggttcacccatcatggaaactgagttgactagtagtagtagaggaaggggttttggtagcatttttggttccactgtt |
119 |
Q |
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| T |
31525933 |
tagctgctgtggtttgaggtctggttcacccatcatggaaactgagttgactagtagtagtagaggaaggggttttggtagcatttttggttccactgtt |
31526032 |
T |
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| Q |
120 |
aagcctagaccaaccaggtttcaaacttctggtttgtgttctgtttcttttctgatataaatgttgactttgatttgtttcgtttgttagttatatatat |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
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| T |
31526033 |
aagcctagaccaaccaggtttcaaacttctggtttgtgttctgtttcttttctgatataaatgtcgactttgatttgtttcgtttgttagt----tatat |
31526128 |
T |
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| Q |
220 |
ggttgatttgtcgtttagttcat |
242 |
Q |
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|||||||| |||||||||||||| |
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| T |
31526129 |
ggttgattcgtcgtttagttcat |
31526151 |
T |
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