View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11599_low_70 (Length: 232)
Name: NF11599_low_70
Description: NF11599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11599_low_70 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 37 - 215
Target Start/End: Complemental strand, 34084145 - 34083967
Alignment:
| Q |
37 |
tttggtttgtgtaactttgaagtacatgggaagctagagtactagacatcttggctgtcgagtttaagatgcagctacaatttaattttctagtttcaat |
136 |
Q |
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| T |
34084145 |
tttggtttgtgtaactttgaagtacatgggaagctagagtaccagacatcttggctgtcgagtttaagatgcagctacaatttaattttctagtttcaat |
34084046 |
T |
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| Q |
137 |
accttaccatttggtataacacaaatgagggcggcatttattttattcacgtcttttattgttctttagagtcacaatt |
215 |
Q |
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| T |
34084045 |
gccttaccatttggtataacacaaatgagggcggcatttattttattcacgtcttttattgttctttagagtcacaatt |
34083967 |
T |
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