View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1159_low_46 (Length: 229)
Name: NF1159_low_46
Description: NF1159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1159_low_46 |
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Alignment Details
Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8072349 - 8072238
Alignment:
| Q |
1 |
cctttttaaaccttaggttattttaaaaaagaatgcatttgacacaaatcaagtcatatcttaaaagaaatatataatttggtccaccaccatgtacctt |
100 |
Q |
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| T |
8072349 |
cctttttaaaccttaggttattttaaaaaagaatgcatttgacacaaatcaagtcatatcttaaaagaaatatataatttggtccaccaccatgtacctt |
8072250 |
T |
|
| Q |
101 |
ctgaggttgcca |
112 |
Q |
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|||||||||||| |
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| T |
8072249 |
ctgaggttgcca |
8072238 |
T |
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