View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11601_high_6 (Length: 269)
Name: NF11601_high_6
Description: NF11601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11601_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 47355352 - 47355598
Alignment:
| Q |
8 |
gagaagaagtgatagtagaggttgcagggaaggatgcaacaaaggagtttgacgctgttggacacagtaaagcagctcaaaacttagtcctaaaatacca |
107 |
Q |
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| T |
47355352 |
gagaagaagtgatagtagaggttgcagggaaggatgcaacaaaggagtttgatgctgttggacacagtaaagtagctcaaaacttagtcctaaaatacca |
47355451 |
T |
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| Q |
108 |
agtgggtgtacttgaaggtgccacggttgaaaaagttgatagtaaggatgttgttgaggacaatgaaccaaggagcaaagaaatgagtgcttttgtgatc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47355452 |
agtgggtgtacttgaaggtgccacggttgaaaaagttgatggtaaggatgttgttgaggacaatgaaccaaggagcaaagaaatgagtgcttttgtgatc |
47355551 |
T |
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| Q |
208 |
aaagaggacagtacgtccaaaactgtgacatttctcgagttctttgt |
254 |
Q |
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| T |
47355552 |
aaagaggacagtacgtccaaaactgtgacatttctcgagttctttgt |
47355598 |
T |
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