View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11601_low_4 (Length: 292)
Name: NF11601_low_4
Description: NF11601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11601_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 25874068 - 25874331
Alignment:
| Q |
19 |
caaataataaataaaattttaaacattatgcatgtattatctgctaatctgacatcaatatcaaagcagagttaaagagtgctttctaggatttaaaact |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
25874068 |
caaataataaataaaattttaaacattatgcatgtattatctgctaatctgacatcaatatcaaagcagagttaaagagtgctttctaggatttaaaatt |
25874167 |
T |
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| Q |
119 |
gtagaaatgtaaactgataaggtaagcaaaccctaaaacatctgacttagatatgctagaggtcgaaggaatgacttacctgacgagcaggtctcattac |
218 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25874168 |
gtagaaatgtaaactgataaggtaagcaaaacctaaaacatctgacttagatatgctagaggtcgaaggaatgacttacctgacgagcaggtctcattac |
25874267 |
T |
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| Q |
219 |
aagtactgttctcccatgcttgtcagtataatttgatctgtagatctttccggtctctgcttct |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
25874268 |
aagtactgttctcccatgcttgtcagtataatttgatctgtagatctttccggtttctgcttct |
25874331 |
T |
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