View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11601_low_7 (Length: 255)
Name: NF11601_low_7
Description: NF11601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11601_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31950632 - 31950388
Alignment:
| Q |
1 |
ttgcagatgatttgcatgatgataacagttcaagatgctcttcacaagggacatattcaaactggaactattattctatggatgaccatgaacacaatat |
100 |
Q |
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| T |
31950632 |
ttgcagatgatttgcatgatgataacagttcaagatgctcctcacaagggacatattcaaactggaactattattctatggatgaccatgaacacaatat |
31950533 |
T |
|
| Q |
101 |
agcctcaatcagaaaagataagcttcccatcatgaagagtcacaattgcaaccattgtaaaattgtaggaggatcacataattgttcatcaagtaaaagt |
200 |
Q |
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| T |
31950532 |
agcctcaatcagaaaagataagcttcccatcatgaagagtcacaattgcaaccattgtaaaattataggaggatcacagaattgttcatcaagtaaaagt |
31950433 |
T |
|
| Q |
201 |
aagatggtgatggaaaatcgaaaactgacacggaataggtctctg |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31950432 |
aagatggtgatggaaaatcgaaaactgacacggaataggtctctg |
31950388 |
T |
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