View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11602_high_21 (Length: 301)
Name: NF11602_high_21
Description: NF11602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11602_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 48 - 265
Target Start/End: Complemental strand, 39392586 - 39392374
Alignment:
| Q |
48 |
tgcttttcaccatttgtataaatataaatactttccacacattagagacacacttgcaagttgtacacccaaactatcaaaaaccttagcacaaaatgca |
147 |
Q |
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| T |
39392586 |
tgcttttcaccatttgtataaatataaatactttccacacattagatacacacttgcaagttgtacacccaaactatcaaaaaccttagcacaaaatgca |
39392487 |
T |
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| Q |
148 |
ttagttaaatacctccattccttcccctttacacataaaaatccactcactcactgatgttgaaactgaacatgcaatgcaatgctatgctccaatcctc |
247 |
Q |
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| T |
39392486 |
ttagttaaatacctccattccttcccctttacacataaaaatccactcactcactgatgttgaaactaaacatgcaatgcaa-----tgctccaatcctc |
39392392 |
T |
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| Q |
248 |
actaactgattacactat |
265 |
Q |
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|||||||||||||||||| |
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| T |
39392391 |
actaactgattacactat |
39392374 |
T |
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