View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11603_low_7 (Length: 454)

Name: NF11603_low_7
Description: NF11603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11603_low_7
NF11603_low_7
[»] chr2 (44 HSPs)
chr2 (101-437)||(792630-792966)
chr2 (5-53)||(792208-792256)
chr2 (1-53)||(20116616-20116668)
chr2 (1-53)||(7787106-7787158)
chr2 (1-53)||(10823110-10823162)
chr2 (1-53)||(18902534-18902586)
chr2 (1-53)||(25540408-25540460)
chr2 (1-53)||(34722730-34722782)
chr2 (9-53)||(44773321-44773365)
chr2 (1-48)||(331551-331598)
chr2 (1-52)||(39201513-39201564)
chr2 (1-47)||(10026626-10026672)
chr2 (1-47)||(10046487-10046533)
chr2 (1-53)||(2550918-2550970)
chr2 (1-53)||(2784982-2785034)
chr2 (1-49)||(3811699-3811747)
chr2 (1-53)||(7747324-7747376)
chr2 (1-53)||(8410181-8410233)
chr2 (1-53)||(12455360-12455412)
chr2 (1-53)||(14169613-14169665)
chr2 (1-53)||(16325645-16325697)
chr2 (1-45)||(22593184-22593228)
chr2 (1-53)||(24179618-24179670)
chr2 (1-53)||(25549778-25549830)
chr2 (1-53)||(28616383-28616435)
chr2 (1-49)||(35443873-35443921)
chr2 (1-53)||(38005452-38005504)
chr2 (1-53)||(41031910-41031962)
chr2 (1-53)||(44139534-44139586)
chr2 (1-53)||(44945643-44945695)
chr2 (1-52)||(6358156-6358207)
chr2 (1-52)||(37560223-37560274)
chr2 (3-53)||(29422267-29422317)
chr2 (3-53)||(44023347-44023397)
chr2 (1-49)||(3643895-3643943)
chr2 (1-53)||(9360752-9360804)
chr2 (5-53)||(12864278-12864326)
chr2 (1-49)||(20963118-20963166)
chr2 (1-53)||(21642000-21642052)
chr2 (1-49)||(26805346-26805394)
chr2 (1-53)||(34346291-34346343)
chr2 (1-53)||(35946788-35946840)
chr2 (1-53)||(38962813-38962865)
chr2 (1-53)||(41220685-41220737)
[»] chr8 (16 HSPs)
chr8 (1-49)||(43027359-43027407)
chr8 (1-53)||(45521222-45521274)
chr8 (1-53)||(15884560-15884612)
chr8 (1-53)||(4479300-4479352)
chr8 (1-53)||(11785969-11786021)
chr8 (1-53)||(18374064-18374116)
chr8 (1-49)||(26570978-26571026)
chr8 (3-53)||(8997548-8997598)
chr8 (1-53)||(583866-583918)
chr8 (1-53)||(2964130-2964182)
chr8 (1-49)||(8803108-8803156)
chr8 (1-53)||(43032955-43033007)
chr8 (1-53)||(44893282-44893334)
chr8 (1-51)||(24938568-24938618)
chr8 (1-49)||(10927660-10927708)
chr8 (1-49)||(39969923-39969971)
[»] chr7 (36 HSPs)
chr7 (1-53)||(38578871-38578923)
chr7 (1-53)||(13095911-13095963)
chr7 (1-53)||(39420890-39420942)
chr7 (1-53)||(45960007-45960059)
chr7 (1-53)||(48551910-48551962)
chr7 (1-53)||(48804736-48804788)
chr7 (2-52)||(4228759-4228809)
chr7 (4-53)||(8734690-8734739)
chr7 (9-53)||(1606002-1606046)
chr7 (1-53)||(1797513-1797565)
chr7 (1-53)||(3353477-3353529)
chr7 (1-53)||(5039422-5039474)
chr7 (1-49)||(5069823-5069871)
chr7 (1-53)||(27028332-27028384)
chr7 (3-51)||(28396166-28396214)
chr7 (1-53)||(38988953-38989004)
chr7 (1-49)||(42032149-42032197)
chr7 (1-53)||(43346783-43346835)
chr7 (1-53)||(48244360-48244412)
chr7 (3-53)||(22573867-22573917)
chr7 (1-50)||(22974020-22974069)
chr7 (4-53)||(34127649-34127698)
chr7 (1-42)||(49142684-49142725)
chr7 (1-53)||(9685780-9685832)
chr7 (1-53)||(10047880-10047932)
chr7 (1-53)||(14535344-14535396)
chr7 (1-53)||(14650370-14650422)
chr7 (1-49)||(17748390-17748438)
chr7 (1-49)||(19914711-19914759)
chr7 (1-53)||(22993371-22993423)
chr7 (1-53)||(23658232-23658284)
chr7 (1-53)||(32823296-32823348)
chr7 (1-53)||(34659279-34659331)
chr7 (1-53)||(39474993-39475045)
chr7 (1-49)||(41267932-41267980)
chr7 (1-53)||(41945526-41945578)
[»] chr5 (40 HSPs)
chr5 (1-53)||(39099783-39099835)
chr5 (1-53)||(14728134-14728186)
chr5 (1-53)||(28857197-28857249)
chr5 (1-53)||(42086378-42086430)
chr5 (3-53)||(28857002-28857052)
chr5 (1-53)||(9805055-9805107)
chr5 (1-53)||(9812923-9812975)
chr5 (1-53)||(12705065-12705117)
chr5 (1-53)||(21375402-21375454)
chr5 (1-53)||(42291509-42291561)
chr5 (1-52)||(6764462-6764513)
chr5 (1-52)||(41801028-41801079)
chr5 (4-49)||(38296738-38296783)
chr5 (1-53)||(1538482-1538534)
chr5 (1-49)||(2485247-2485295)
chr5 (1-53)||(8513570-8513622)
chr5 (1-53)||(12766182-12766234)
chr5 (5-53)||(13887510-13887558)
chr5 (1-53)||(20525889-20525941)
chr5 (1-53)||(23383708-23383760)
chr5 (1-49)||(27648433-27648481)
chr5 (1-52)||(11845806-11845857)
chr5 (1-48)||(18294493-18294540)
chr5 (10-53)||(21487674-21487717)
chr5 (1-52)||(27484212-27484263)
chr5 (1-51)||(7308370-7308420)
chr5 (3-53)||(36783296-36783346)
chr5 (1-46)||(24875396-24875441)
chr5 (1-46)||(35245017-35245062)
chr5 (1-53)||(5079382-5079433)
chr5 (1-53)||(9168257-9168309)
chr5 (1-53)||(14588621-14588673)
chr5 (1-49)||(15034126-15034174)
chr5 (1-53)||(20255420-20255472)
chr5 (1-53)||(24463890-24463942)
chr5 (1-53)||(37263291-37263343)
chr5 (1-53)||(38897723-38897775)
chr5 (5-53)||(40060339-40060387)
chr5 (1-53)||(41163464-41163516)
chr5 (1-53)||(42861222-42861274)
[»] chr4 (44 HSPs)
chr4 (1-53)||(7246650-7246702)
chr4 (1-50)||(54946304-54946353)
chr4 (1-53)||(38166082-38166134)
chr4 (1-53)||(40780865-40780917)
chr4 (1-52)||(8889077-8889128)
chr4 (1-51)||(37194865-37194915)
chr4 (1-53)||(1940781-1940833)
chr4 (1-53)||(15839939-15839991)
chr4 (1-53)||(17080098-17080150)
chr4 (1-53)||(47682386-47682438)
chr4 (1-53)||(49952149-49952202)
chr4 (1-53)||(4738673-4738725)
chr4 (1-53)||(5472852-5472904)
chr4 (1-53)||(6032647-6032699)
chr4 (1-49)||(12703553-12703601)
chr4 (1-53)||(16450355-16450407)
chr4 (1-53)||(24166505-24166557)
chr4 (1-53)||(29895842-29895894)
chr4 (1-49)||(30317288-30317336)
chr4 (1-53)||(36145219-36145271)
chr4 (1-53)||(43468402-43468454)
chr4 (1-49)||(46108746-46108794)
chr4 (1-53)||(48015077-48015129)
chr4 (1-53)||(48317279-48317331)
chr4 (1-53)||(49260669-49260721)
chr4 (1-53)||(55921089-55921141)
chr4 (1-48)||(20421828-20421875)
chr4 (7-53)||(48834704-48834750)
chr4 (1-46)||(20532420-20532465)
chr4 (1-46)||(31635758-31635803)
chr4 (1-46)||(41162893-41162938)
chr4 (1-53)||(2559362-2559414)
chr4 (1-53)||(3159473-3159525)
chr4 (1-53)||(8064802-8064854)
chr4 (1-53)||(13552157-13552209)
chr4 (1-53)||(14567294-14567346)
chr4 (1-53)||(16645173-16645225)
chr4 (1-53)||(25406567-25406619)
chr4 (1-49)||(31588741-31588789)
chr4 (1-53)||(38168311-38168363)
chr4 (1-53)||(42722581-42722633)
chr4 (1-49)||(43458668-43458716)
chr4 (1-53)||(47078513-47078565)
chr4 (1-49)||(50485998-50486046)
[»] chr3 (48 HSPs)
chr3 (1-53)||(47219194-47219246)
chr3 (1-53)||(28572216-28572268)
chr3 (1-49)||(29127969-29128017)
chr3 (10-53)||(21325123-21325166)
chr3 (1-52)||(26361973-26362024)
chr3 (2-53)||(36043679-36043730)
chr3 (3-53)||(7328895-7328945)
chr3 (1-53)||(3507538-3507590)
chr3 (1-49)||(7310712-7310760)
chr3 (1-53)||(7650277-7650329)
chr3 (1-53)||(15320236-15320288)
chr3 (1-53)||(44064594-44064646)
chr3 (1-53)||(45877504-45877556)
chr3 (1-53)||(49021208-49021260)
chr3 (1-53)||(53649777-53649829)
chr3 (1-52)||(47164156-47164207)
chr3 (1-47)||(30767258-30767304)
chr3 (1-53)||(2029272-2029324)
chr3 (1-53)||(3136699-3136751)
chr3 (1-49)||(4638204-4638252)
chr3 (1-53)||(19873422-19873474)
chr3 (1-53)||(22909833-22909885)
chr3 (1-53)||(23511617-23511669)
chr3 (1-53)||(26207806-26207858)
chr3 (4-52)||(34374448-34374496)
chr3 (1-49)||(35316006-35316054)
chr3 (1-49)||(47471881-47471929)
chr3 (1-53)||(50405608-50405660)
chr3 (1-53)||(54261276-54261328)
chr3 (1-53)||(55069684-55069736)
chr3 (1-52)||(41630518-41630569)
chr3 (1-47)||(33251712-33251758)
chr3 (1-51)||(43330739-43330789)
chr3 (1-42)||(7648790-7648831)
chr3 (7-48)||(8683250-8683291)
chr3 (1-50)||(26043862-26043911)
chr3 (3-48)||(32522031-32522076)
chr3 (1-53)||(6462462-6462514)
chr3 (1-53)||(13893976-13894028)
chr3 (1-53)||(19147011-19147063)
chr3 (1-53)||(24506653-24506705)
chr3 (1-53)||(25295010-25295062)
chr3 (1-53)||(29762160-29762212)
chr3 (1-49)||(47749114-47749162)
chr3 (1-53)||(48342070-48342122)
chr3 (1-53)||(50753346-50753398)
chr3 (1-53)||(51060286-51060338)
chr3 (1-53)||(54237498-54237550)
[»] chr1 (42 HSPs)
chr1 (1-51)||(5504082-5504132)
chr1 (1-53)||(10172976-10173028)
chr1 (1-53)||(31576552-31576604)
chr1 (3-48)||(14254278-14254323)
chr1 (1-53)||(3850747-3850799)
chr1 (1-53)||(26325863-26325915)
chr1 (1-53)||(26660189-26660240)
chr1 (1-49)||(34697386-34697434)
chr1 (1-53)||(50371839-50371891)
chr1 (11-53)||(6899619-6899661)
chr1 (3-53)||(9659184-9659234)
chr1 (3-49)||(32142855-32142901)
chr1 (2-52)||(44969716-44969766)
chr1 (2-47)||(1764208-1764253)
chr1 (4-53)||(37339874-37339923)
chr1 (5-53)||(892307-892355)
chr1 (1-53)||(4581687-4581739)
chr1 (1-53)||(8764042-8764094)
chr1 (1-53)||(10422839-10422891)
chr1 (1-53)||(11397894-11397946)
chr1 (1-53)||(17642009-17642061)
chr1 (1-53)||(30927732-30927784)
chr1 (1-53)||(41663861-41663913)
chr1 (1-53)||(43959826-43959878)
chr1 (5-53)||(51437512-51437560)
chr1 (10-53)||(34878626-34878669)
chr1 (1-52)||(35211178-35211229)
chr1 (3-49)||(32150931-32150977)
chr1 (1-51)||(33498846-33498896)
chr1 (4-53)||(17389825-17389874)
chr1 (1-38)||(38791630-38791667)
chr1 (12-53)||(45536784-45536825)
chr1 (5-53)||(8905168-8905216)
chr1 (1-49)||(10336567-10336615)
chr1 (1-53)||(16263596-16263648)
chr1 (1-53)||(16956517-16956569)
chr1 (1-53)||(18915918-18915970)
chr1 (1-53)||(38859121-38859173)
chr1 (1-53)||(40288482-40288534)
chr1 (21-53)||(40702585-40702617)
chr1 (1-53)||(49078165-49078217)
chr1 (1-53)||(50094955-50095007)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-53)||(6908-6960)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-53)||(224370-224422)
scaffold0011 (1-52)||(186570-186621)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-53)||(42836-42888)
scaffold0009 (1-53)||(9495-9547)
[»] chr6 (31 HSPs)
chr6 (1-53)||(5029871-5029923)
chr6 (1-53)||(5253227-5253279)
chr6 (1-53)||(8932715-8932767)
chr6 (1-53)||(8938765-8938817)
chr6 (1-53)||(8944181-8944233)
chr6 (1-53)||(9633629-9633681)
chr6 (1-53)||(14326051-14326103)
chr6 (1-53)||(14419061-14419113)
chr6 (1-53)||(17114901-17114953)
chr6 (1-53)||(6606101-6606153)
chr6 (1-53)||(8611978-8612030)
chr6 (1-53)||(13391340-13391392)
chr6 (1-53)||(14107362-14107414)
chr6 (1-53)||(14783424-14783476)
chr6 (1-53)||(30788857-30788909)
chr6 (1-48)||(34954628-34954675)
chr6 (1-47)||(29444775-29444821)
chr6 (1-53)||(2271307-2271359)
chr6 (1-53)||(19089552-19089604)
chr6 (1-53)||(21898702-21898754)
chr6 (1-49)||(30410499-30410547)
chr6 (10-53)||(3601147-3601190)
chr6 (1-51)||(15643840-15643890)
chr6 (1-50)||(33940065-33940114)
chr6 (6-34)||(1928419-1928447)
chr6 (1-53)||(8149801-8149853)
chr6 (1-53)||(12606484-12606536)
chr6 (1-53)||(12635868-12635920)
chr6 (1-53)||(13036008-13036060)
chr6 (1-53)||(13468987-13469039)
chr6 (6-50)||(13584453-13584497)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-51)||(41097-41147)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-53)||(12723-12775)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-53)||(155715-155767)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-53)||(68567-68619)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-53)||(1618-1670)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-53)||(12626-12678)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-49)||(17443-17491)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-53)||(8705-8757)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-53)||(623-675)
scaffold0002 (1-53)||(319475-319527)
[»] scaffold0004 (2 HSPs)
scaffold0004 (3-53)||(94984-95035)
scaffold0004 (1-51)||(7841-7891)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-53)||(19308-19360)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-53)||(58037-58089)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-53)||(250029-250081)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-53)||(65156-65208)


Alignment Details
Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 101 - 437
Target Start/End: Original strand, 792630 - 792966
Alignment:
Q  101 agtatgttttatcttacttacgtttacttcttaccttggtcacttctgtaattactacattagatgacttctttctatgaaattgcagttactttagagg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792630 agtatgttttatcttacttacgtttacttcttaccttggtcacttctgtaattactacattagatgacttctttctatgaaattgcagttactttagagg 792729  T
Q  201 agtatactagttgaaattactcttcataaaaccgaagttgtccatacggttatttcacacaaactttatgatgatgcttattaaaaacacacaaacttcg 300  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792730 agtatactagttgaaattgctcttcataaaaccgaagttgttcatacggttatttcacacaaactttatgatgatgcttattaaaaacacacaaacttcg 792829  T
Q  301 tgattagttgcatttcccaaactaatgcatttattttgggggaagaaaagggaaaatcaaaagtcaagtgttttgattgtaaaagcaattttaatttttt 400  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792830 tgattagttgcatttcccaaaataatgcatttatttagggggaagaaaagggaaaatcaaaagtcaagtgttttgattgtaaaagcaattttaatttttt 792929  T
Q  401 gttttgcgaaatctctgttacataaagggaatgacac 437  Q
    |||||||||||||||||||||||||||||||||||||    
T  792930 gttttgcgaaatctctgttacataaagggaatgacac 792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 792208 - 792256
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  792208 cgcatgagccggattagtcgcccatctttggtgggtcggaaaccggtgc 792256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20116668 - 20116616
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  20116668 tctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgc 20116616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7787106 - 7787158
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||    
T  7787106 tctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtgc 7787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10823110 - 10823162
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  10823110 tctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgc 10823162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18902586 - 18902534
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  18902586 tctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgc 18902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25540460 - 25540408
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||    
T  25540460 tctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 25540408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34722730 - 34722782
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||||||| || |||||||||||    
T  34722730 tctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgc 34722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 44773321 - 44773365
Alignment:
Q  9 tgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  44773321 tgagccggattagtcgctcacctttgatgggtcggaaaccggtgc 44773365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 331551 - 331598
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  331551 tctacgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39201564 - 39201513
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||||||||||||||||||||||  || ||||| |||||||||||||||||    
T  39201564 tctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10026672 - 10026626
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  10026672 tctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10046533 - 10046487
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  10046533 tctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2550918 - 2550970
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||||||  |||| ||||| | ||||||||||    
T  2550918 tctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgc 2550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2784982 - 2785034
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| | ||||||||| ||||| |||||| |||||||||||||||    
T  2784982 tctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgc 2785034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3811747 - 3811699
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||| ||||||| ||||| |||||| |||||||    
T  3811747 tctacgcatgagccggattactcgcccacctttggtgggtcagaaaccg 3811699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7747324 - 7747376
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||  ||||||||||||||||||    
T  7747324 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 7747376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8410181 - 8410233
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||||||  ||||  |||||||||||||||||    
T  8410181 tctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgc 8410233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12455360 - 12455412
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| || | ||| ||||||||||||||||||    
T  12455360 tctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgc 12455412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14169665 - 14169613
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| | | | ||| ||||||||||||||||||    
T  14169665 tctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgc 14169613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16325645 - 16325697
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||| ||||||||| ||| | ||| ||||||||||||||||||    
T  16325645 tctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgc 16325697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22593184 - 22593228
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaa 45  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  22593184 tctacgcatgagccggattagtcgtccacctttggtgggtcggaa 22593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24179618 - 24179670
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||||||||| |||||   ||||||||||    
T  24179618 tctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgc 24179670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25549778 - 25549830
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  25549778 tctacgcacgagccggattagtcgtccatctttgatggatcgtaaatcggtgc 25549830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28616435 - 28616383
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| ||||||||||||||||||  |||||| |||||||||||    
T  28616435 tctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgc 28616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35443921 - 35443873
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  35443921 tctacgcatgagccggattagtcgtccattattgatggatcggaaaccg 35443873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38005452 - 38005504
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| |||||||||||||||||||||| ||||| ||| |||||||| |||||    
T  38005452 tctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgc 38005504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41031962 - 41031910
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||| |||| ||||| ||||||||||||| ||||    
T  41031962 tctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgc 41031910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44139534 - 44139586
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| |  || ||||||||||||||||||    
T  44139534 tctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgc 44139586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44945643 - 44945695
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||  ||| ||||||||||||||    
T  44945643 tctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgc 44945695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6358207 - 6358156
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||||||||||||||||||| ||| | ||| ||||||| |||||||||    
T  6358207 tctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtg 6358156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37560223 - 37560274
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| ||||||||||| ||| ||| ||||||||||||| |||||||||    
T  37560223 tctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtg 37560274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29422267 - 29422317
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||||||||||| ||| ||||||||| ||||||| ||||||    
T  29422267 tacgcacgagccggattagtcgtccacctttgatggatcggaaatcggtgc 29422317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 44023347 - 44023397
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||| || |||||||| ||||||||| ||||| ||||||||||||    
T  44023347 tacgcatgagtcgaattagtcgtccatctttggtgggttggaaaccggtgc 44023397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3643943 - 3643895
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||| |||||||||| ||| ||||| |||| |||||||||    
T  3643943 tctacgcatgagctggattagtcgtccacctttggtgggccggaaaccg 3643895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9360804 - 9360752
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||| |||||||||||| ||||  |||| |||||||||||||    
T  9360804 tctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgc 9360752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12864278 - 12864326
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||| ||||||||| ||| | ||| ||||||||||||||||||    
T  12864278 cgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgc 12864326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20963166 - 20963118
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||| ||||| | ||||||||||||| ||||||||||||| ||||||    
T  20963166 tctacgtatgaggcagattagtcgcccacctttgatgggtcgaaaaccg 20963118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21642000 - 21642052
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||| |||| ||||||  ||||| ||||||| ||||||||||    
T  21642000 tctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaaccggtgc 21642052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26805346 - 26805394
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||| ||||||||||||||| ||||| ||| ||| ||||||    
T  26805346 tctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccg 26805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34346343 - 34346291
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| | ||||| |||| || ||||| ||||||||||||||||||    
T  34346343 tctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgc 34346291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35946788 - 35946840
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| | ||| |||||||||||| |||||    
T  35946788 tctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgc 35946840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38962813 - 38962865
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| |||||||||||| ||| ||||| |||||| ||||| |||||    
T  38962813 tctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgc 38962865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41220685 - 41220737
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||| ||||||||  || ||||  ||||||||||||||||||    
T  41220685 tctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgc 41220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43027359 - 43027407
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43027359 tctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccg 43027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45521222 - 45521274
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  45521222 tctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgc 45521274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15884612 - 15884560
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  15884612 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 15884560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4479352 - 4479300
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  4479352 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgc 4479300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11785969 - 11786021
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||| ||||| |||| |||||||||||| ||||||||||||||    
T  11785969 tctacgcatgagccagattaatcgctcatctttgatggatcggaaaccggtgc 11786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18374064 - 18374116
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||    
T  18374064 tctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgc 18374116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26570978 - 26571026
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  26570978 tctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccg 26571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 8997598 - 8997548
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| |||||||||  |||||||| ||||||||||||||||||    
T  8997598 tacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgc 8997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 583866 - 583918
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||||||| ||||||||| |  |||||||||||    
T  583866 tctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgc 583918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2964130 - 2964182
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| || |||||||||||||||| ||||| |||||| |||||||||||    
T  2964130 tctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgc 2964182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8803108 - 8803156
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| |||||||||||||||||||||  || ||||||||||||||    
T  8803108 tctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccg 8803156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43032955 - 43033007
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| || ||||||||||||||||||| ||||| |||||| |||||||||||    
T  43032955 tctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgc 43033007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44893334 - 44893282
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||| |||| || | ||||||||||||||||||||||    
T  44893334 tctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgc 44893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24938618 - 24938568
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    ||||||||||| |||||||||||  ||| ||||||||| ||||||||||||    
T  24938618 tctacgcatgaaccggattagtcatccacctttgatggatcggaaaccggt 24938568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10927660 - 10927708
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||||||||||||||  || ||||  ||||||||||||||    
T  10927660 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccg 10927708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39969971 - 39969923
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||| |||||| | ||||||||||||||| ||||||| ||||||||||    
T  39969971 tctacacatgagtcagattagtcgcccatcattgatggatcggaaaccg 39969923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38578923 - 38578871
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  38578923 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 38578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13095911 - 13095963
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  13095911 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39420890 - 39420942
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| | | |||||||||| |||||||||||||    
T  39420890 tctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45960059 - 45960007
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||| ||||||||||||||| || ||||||||| ||||||||||||||    
T  45960059 tctacgcataagccggattagtcgctcacctttgatggatcggaaaccggtgc 45960007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48551910 - 48551962
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  48551910 tctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgc 48551962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48804736 - 48804788
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  48804736 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 48804788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 4228809 - 4228759
Alignment:
Q  2 ctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||| |||||    
T  4228809 ctacgcatgagccggattagtcgcccaccattgatgggtcgaaaatcggtg 4228759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 8734739 - 8734690
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  8734739 acgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgc 8734690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 1606002 - 1606046
Alignment:
Q  9 tgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  1606002 tgagccggattagtcgcccacctttggtggatcggaaaccggtgc 1606046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1797513 - 1797565
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||| |||||| ||||||||||||| ||| ||||||||||    
T  1797513 tctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtgc 1797565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3353477 - 3353529
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  3353477 tctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgc 3353529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5039474 - 5039422
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||| ||| ||| ||||||||||    
T  5039474 tctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgc 5039422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5069871 - 5069823
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||  |||||||||||||||||| ||||| ||||||||||||||    
T  5069871 tctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccg 5069823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27028332 - 27028384
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| ||||||| ||||||||||| || ||||| ||||||||||||||||||    
T  27028332 tctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgc 27028384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 28396214 - 28396166
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||||||||||||||||| | | ||||| ||||||||||||||||    
T  28396214 tacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38988953 - 38989004
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| ||||||||||||| |||||||| |||||| |||||||||||    
T  38988953 tctacgcatgaaccggattagtcgctcatctttggtgggtc-gaaaccggtgc 38989004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42032149 - 42032197
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||||| |||||| | ||| ||||||||||||||||||||    
T  42032149 tctacgcatgagccgaattagttgtccacctttgatgggtcggaaaccg 42032197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43346835 - 43346783
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| | |||||||||||||||| |||||||| ||||||||||||| ||||    
T  43346835 tctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgc 43346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48244412 - 48244360
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||| ||| ||| ||||||||||    
T  48244412 tctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgc 48244360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 22573867 - 22573917
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||| ||| ||||| ||||||||| | ||||||||||    
T  22573867 tacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgc 22573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22974020 - 22974069
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccgg 50  Q
    |||||||||||||| ||||||||| ||| ||||| |||||| ||||||||    
T  22974020 tctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccgg 22974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34127698 - 34127649
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| ||||||||||||||||||| ||||| ||||||  ||||||||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgc 34127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49142725 - 49142684
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcg 42  Q
    |||||||| ||||||||||||| ||||| |||||||||||||    
T  49142725 tctacgcacgagccggattagttgcccacctttgatgggtcg 49142684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9685780 - 9685832
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||  ||| | ||||||| | ||||||||||||    
T  9685780 tctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgc 9685832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10047932 - 10047880
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| | |||||||| ||| | ||| ||||||||||||||||||    
T  10047932 tctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgc 10047880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14535344 - 14535396
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||| |||||||||||||| | |||||||||| ||||| |||||    
T  14535344 tctacgcacgagctggattagtcgcccaccattgatgggtcagaaactggtgc 14535396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14650370 - 14650422
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||| |||||||| || ||||| ||||| | ||||||||||    
T  14650370 tctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgc 14650422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17748438 - 17748390
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||| | ||||||||||||||| ||| ||||| ||||||||||||||    
T  17748438 tctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccg 17748390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19914759 - 19914711
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||| ||||| ||||||| ||||||||||| | ||||||    
T  19914759 tctacgcatgagccagattaatcgcccacctttgatgggttgtaaaccg 19914711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22993423 - 22993371
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| || ||||||||||||| || ||||| |||||| |||||||||||    
T  22993423 tctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgc 22993371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23658232 - 23658284
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| || ||||||||||||||| ||||||||| |||||| |||||| ||||    
T  23658232 tctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgc 23658284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32823296 - 32823348
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||  | | |||||||||||||||| |||||    
T  32823296 tctacgcacgagccggattagtcgcagaccattgatgggtcggaaacgggtgc 32823348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34659279 - 34659331
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| | ||| || |||| ||||||||||    
T  34659279 tctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgc 34659331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39474993 - 39475045
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||  ||||||| ||||| ||||    
T  39474993 tctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgc 39475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41267980 - 41267932
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||   ||||||||| ||| ||||||||||||||||||||    
T  41267980 tctacgcatgagttagattagtcgtccacctttgatgggtcggaaaccg 41267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41945526 - 41945578
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||| || |||||||| ||||||    
T  41945526 tctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgc 41945578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39099835 - 39099783
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  39099835 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14728134 - 14728186
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  14728134 tctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgc 14728186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28857197 - 28857249
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  28857197 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 28857249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42086378 - 42086430
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  42086378 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 42086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 28857002 - 28857052
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  28857002 tacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 28857052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9805055 - 9805107
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  9805055 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgc 9805107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9812923 - 9812975
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  9812923 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgc 9812975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12705065 - 12705117
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  12705065 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgc 12705117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21375402 - 21375454
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||    
T  21375402 tctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgc 21375454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42291561 - 42291509
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||    
T  42291561 tctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgc 42291509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6764513 - 6764462
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||    
T  6764513 tctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtg 6764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41801028 - 41801079
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| |||||    
T  41801028 tctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtg 41801079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 38296783 - 38296738
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  38296783 acgcacgagtcggattagtcgcccacctttgatgggtcggaaaccg 38296738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1538482 - 1538534
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| ||| ||| | ||| ||||||||||||||||||    
T  1538482 tctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgc 1538534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2485247 - 2485295
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||| ||||| |||||||||||| || ||||||||||||||||||||    
T  2485247 tctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccg 2485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8513570 - 8513622
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| ||||||||| ||| ||||| ||||||||||||||||||    
T  8513570 tctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgc 8513622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12766182 - 12766234
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| || ||||||||||||| ||||| |||||| |||||||||||    
T  12766182 tctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgc 12766234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 13887510 - 13887558
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| ||||||||||||||||||| |||| ||||||||||| |||||||    
T  13887510 cgcacgagccggattagtcgcccacctttaatgggtcggaacccggtgc 13887558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20525889 - 20525941
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||| ||||||||||||||    
T  20525889 tctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgc 20525941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23383708 - 23383760
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||| ||| ||||| |||||||||||| |||||    
T  23383708 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgc 23383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27648481 - 27648433
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||||||||    
T  27648481 tctacgtatgagccggattagtcgtccatctttggtggatcggaaaccg 27648433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11845857 - 11845806
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||| |||||||| |||| ||||||| ||||||||||| |||||||||||    
T  11845857 tctacgtatgagccgaattaatcgcccacctttgatgggttggaaaccggtg 11845806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18294540 - 18294493
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    ||||| ||||| |||||||| ||||||||||||| |||||||||||||    
T  18294540 tctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 21487674 - 21487717
Alignment:
Q  10 gagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||    
T  21487674 gagccggattagtcgcccacctttaatgggtcgaaaaccggtgc 21487717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27484212 - 27484263
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||||||||| ||||||||| || ||||||||||| ||| |||||||||||    
T  27484212 tctacgcatgaaccggattagacgtccatctttgataggttggaaaccggtg 27484263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7308420 - 7308370
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    ||||||||||||||||||||||||| || ||||||||| ||  ||||||||    
T  7308420 tctacgcatgagccggattagtcgctcacctttgatggatcaaaaaccggt 7308370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 36783296 - 36783346
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||| ||| | ||| ||||| ||||||||||||    
T  36783296 tacgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgc 36783346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24875396 - 24875441
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaa 46  Q
    |||||||| ||||||||||| ||| ||| |||||||||||||||||    
T  24875396 tctacgcacgagccggattaatcgtccacctttgatgggtcggaaa 24875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35245062 - 35245017
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaa 46  Q
    |||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  35245062 tctacgcatgagcctgattagttgcccacctttgatggttcggaaa 35245017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5079382 - 5079433
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| | ||||| ||||||||||    
T  5079382 tctacgcacgagccggattagtcgcccacctttggt-ggtcgaaaaccggtgc 5079433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9168309 - 9168257
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||  ||||||| ||| ||||||    
T  9168309 tctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgc 9168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14588673 - 14588621
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| || | || ||||||||||    
T  14588673 tctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgc 14588621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15034126 - 15034174
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||| ||||||| | ||| ||||||||| ||||||||||    
T  15034126 tctacgcatgagcctgattagttgtccacctttgatggatcggaaaccg 15034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20255420 - 20255472
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||| ||| ||||| || ||||||||| |||||    
T  20255420 tctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgc 20255472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24463942 - 24463890
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| ||| ||||||||||||||||||| ||||  ||||||| ||||||||||    
T  24463942 tctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtgc 24463890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37263291 - 37263343
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||  ||| ||||||||||||||    
T  37263291 tctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgc 37263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38897775 - 38897723
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||| ||||| ||||| ||| ||||||||| ||||    
T  38897775 tctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgc 38897723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 40060339 - 40060387
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||| ||| ||| | ||||||||| ||||||||||||    
T  40060339 cgcatgagccggattaatcgtccaccattgatgggttggaaaccggtgc 40060387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41163516 - 41163464
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||| ||| ||||  |||||||||||| |||||    
T  41163516 tctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgc 41163464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42861274 - 42861222
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| ||| ||| | ||| ||||||||| ||||||||    
T  42861274 tctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgc 42861222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7246702 - 7246650
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  7246702 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 7246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54946304 - 54946353
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccgg 50  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  54946304 tctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccgg 54946353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38166082 - 38166134
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  38166082 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 38166134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40780917 - 40780865
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  40780917 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 40780865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8889077 - 8889128
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  8889077 tctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37194865 - 37194915
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  37194865 tctacgcatgagccggattagttgcccgtcattgatgggtcggaaaccggt 37194915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1940833 - 1940781
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  1940833 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgc 1940781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15839991 - 15839939
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  15839991 tctacgcatgagccggattagtcgcccttctttgataggttggaaaccagtgc 15839939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17080098 - 17080150
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||||||| ||| ||||||||||    
T  17080098 tctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgc 17080150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47682438 - 47682386
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  47682438 tctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgc 47682386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49952202 - 49952149
Alignment:
Q  1 tctacgcatgagccggattagtcgc-ccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||  || ||||||||||| ||||||||||||    
T  49952202 tctacgcatgagccggattagtcgcgtcacctttgatgggttggaaaccggtgc 49952149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4738673 - 4738725
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| | |||||||| ||| ||||| ||||||||||||||||||    
T  4738673 tctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgc 4738725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5472904 - 5472852
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||| |||| |||||    
T  5472904 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgc 5472852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6032699 - 6032647
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||||||||||||| | | ||||| ||||||||||||||||||    
T  6032699 tctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgc 6032647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12703601 - 12703553
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||| ||||||||||||||||||||||| | || ||||||||||    
T  12703601 tctacgcataagccggattagtcgcccatctttaaaggatcggaaaccg 12703553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16450355 - 16450407
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||| ||||||||| ||| ||||| | ||||||||||||||||    
T  16450355 tctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgc 16450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24166505 - 24166557
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| |||||||| |||| ||||||||| ||||||||||||||    
T  24166505 tctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgc 24166557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29895842 - 29895894
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||| ||||||||||||||    
T  29895842 tctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgc 29895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30317288 - 30317336
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  30317288 tctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccg 30317336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36145271 - 36145219
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| |||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  36145271 tctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgc 36145219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43468402 - 43468454
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||| |  || ||||||||| ||||||||    
T  43468402 tctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgc 43468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46108746 - 46108794
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  46108746 tctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccg 46108794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48015129 - 48015077
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||| |||||  |||||||| ||||||||||||||    
T  48015129 tctacgcacgagccggattagtagcccaattttgatggatcggaaaccggtgc 48015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48317331 - 48317279
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| | ||||||||| ||||||| ||||    
T  48317331 tctacgcacgagccggattagtcgcccaccgttgatgggttggaaaccagtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49260721 - 49260669
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  49260721 tctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgc 49260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 55921089 - 55921141
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||||||||| |||| || ||||| ||||||||||||||||||    
T  55921089 tctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55921141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20421828 - 20421875
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  20421828 tctacgcatgagccagattaatcgtccatcattgatgggtcggaaacc 20421875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 48834750 - 48834704
Alignment:
Q  7 catgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||||||||| | ||||| ||||||||||||||||||    
T  48834750 catgagtcggattagtcgcctacctttggtgggtcggaaaccggtgc 48834704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20532465 - 20532420
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaa 46  Q
    |||||||||||||||||| ||||||||| ||||| ||| |||||||    
T  20532465 tctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31635803 - 31635758
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaa 46  Q
    ||||||||||||  |||||| |||||||||||||||||||| ||||    
T  31635803 tctacgcatgagttggattaatcgcccatctttgatgggtcagaaa 31635758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41162938 - 41162893
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaa 46  Q
    |||| |||||||||| |||||||||||| ||||||||| |||||||    
T  41162938 tctatgcatgagccgaattagtcgcccacctttgatggatcggaaa 41162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2559362 - 2559414
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||  |||||||||| ||| ||| ||||| ||||||||||||||||||    
T  2559362 tctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgc 2559414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3159525 - 3159473
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| |||||||||| || | ||| ||||||||||||||||||    
T  3159525 tctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8064854 - 8064802
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | || || ||||| ||||||||||    
T  8064854 tctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgc 8064802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13552157 - 13552209
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||  ||| | ||||||| | ||||||||||||    
T  13552157 tctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgc 13552209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14567294 - 14567346
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| |  ||||| ||||||||||| ||||||    
T  14567294 tctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgc 14567346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16645173 - 16645225
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| |||||| | ||||||||||||| || || ||||||||||||||||||    
T  16645173 tctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgc 16645225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25406619 - 25406567
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||  | |||||||||  || ||||||||||||||||||||||||    
T  25406619 tctacgcatgaatcagattagtcgttcacctttgatgggtcggaaaccggtgc 25406567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31588741 - 31588789
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||||||||||||||| ||  |||| ||| ||||||||||    
T  31588741 tctacgcatgagccggattagtcgctcacttttggtggatcggaaaccg 31588789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38168311 - 38168363
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||  ||||| ||||||||||||    
T  38168311 tctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgc 38168363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42722633 - 42722581
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||  ||||||| ||||||||||    
T  42722633 tctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgc 42722581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43458668 - 43458716
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||| | ||||||||||||||| ||| |||||||| |||||||||||    
T  43458668 tctacggacgagccggattagtcgtccacctttgatgagtcggaaaccg 43458716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47078513 - 47078565
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| || | ||| ||||||||||||| ||||    
T  47078513 tctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgc 47078565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50485998 - 50486046
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| ||||||||||||||||||| | ||  ||||||||||||||    
T  50485998 tctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccg 50486046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47219194 - 47219246
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  47219194 tctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgc 47219246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28572268 - 28572216
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  28572268 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 28572216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29127969 - 29128017
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  29127969 tctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccg 29128017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 21325123 - 21325166
Alignment:
Q  10 gagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  21325123 gagccggattaatcgcccatctttgatgggtcggaaaccggtgc 21325166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26362024 - 26361973
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  26362024 tctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtg 26361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 36043730 - 36043679
Alignment:
Q  2 ctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 36043679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 7328895 - 7328945
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  7328895 tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgc 7328945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3507590 - 3507538
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  3507590 tctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 3507538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7310760 - 7310712
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  7310760 tctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccg 7310712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7650277 - 7650329
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  7650277 tctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgc 7650329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15320236 - 15320288
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  15320236 tctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgc 15320288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44064594 - 44064646
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| ||||||||||||| || ||||| ||||||||||||||||||    
T  44064594 tctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgc 44064646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45877504 - 45877556
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||||||    
T  45877504 tctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgc 45877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49021260 - 49021208
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  49021260 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 49021208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53649777 - 53649829
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||||||||    
T  53649777 tctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgc 53649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47164156 - 47164207
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| |||||||||||||||| |||||||| ||| |||||||||||||    
T  47164156 tctacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtg 47164207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30767304 - 30767258
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  30767304 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2029324 - 2029272
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||||||| | ||||||||||| ||||| ||||    
T  2029324 tctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgc 2029272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3136751 - 3136699
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||| ||| ||||| | ||||||||||||||||    
T  3136751 tctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgc 3136699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4638204 - 4638252
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| ||||||||||||| ||||| |||| |||||||||||||||    
T  4638204 tctacgcacgagccggattagtagcccacctttaatgggtcggaaaccg 4638252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19873422 - 19873474
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||||||||  |||||||||||| |||||    
T  19873422 tctacgcacgagccggattagtcgtccatcttttgtgggtcggaaactggtgc 19873474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22909833 - 22909885
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||| ||||||||  || ||||||||||||||||||| ||||    
T  22909833 tctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgc 22909885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23511617 - 23511669
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||    
T  23511617 tctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgc 23511669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26207858 - 26207806
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||||  ||  ||||||||||||||||||    
T  26207858 tctacgcatgagccggattagtcggccattattagtgggtcggaaaccggtgc 26207806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 34374496 - 34374448
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||| || |||||||||||||| |||||| |||||||||||||||||    
T  34374496 acgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtg 34374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35316006 - 35316054
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  35316006 tctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccg 35316054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47471881 - 47471929
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||||| |||||||| ||| ||||| ||||||||||||||    
T  47471881 tctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccg 47471929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50405660 - 50405608
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  50405660 tctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54261276 - 54261328
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||  ||||||||||||||||||    
T  54261276 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 54261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 55069736 - 55069684
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||| |||| || ||||| ||||||||||||||||||    
T  55069736 tctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41630569 - 41630518
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||| |||||||||||||||||||||| ||||| | |||||||||| ||||    
T  41630569 tctacacatgagccggattagtcgcccacctttggttggtcggaaactggtg 41630518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33251712 - 33251758
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    |||||||||||||||||||||||| |||  |||||||||||| ||||    
T  33251712 tctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43330789 - 43330739
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||| ||||||||||||||||||| ||||| ||||||  ||||||||    
T  43330789 tctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7648790 - 7648831
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcg 42  Q
    |||||||| ||||||||||||||||||| ||||| |||||||    
T  7648790 tctacgcacgagccggattagtcgcccacctttgttgggtcg 7648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 8683291 - 8683250
Alignment:
Q  7 catgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||||||||||| ||| ||||| |||||||||||||    
T  8683291 catgagccggattagtcgtccacctttggtgggtcggaaacc 8683250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26043862 - 26043911
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccgg 50  Q
    ||||||||||||||||||||||||| || ||||| || ||| ||||||||    
T  26043862 tctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 32522031 - 32522076
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||| | ||||||||| ||| |||||||||||||||||||    
T  32522031 tacgcatgagtcagattagtcgtccacctttgatgggtcggaaacc 32522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6462462 - 6462514
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||||  ||  ||||| ||||||||||||    
T  6462462 tctacgcatgagccggattagtcgaccattattagtgggttggaaaccggtgc 6462514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13893976 - 13894028
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| || ||||||||||||||||||| ||||| ||| ||| ||||||||||    
T  13893976 tctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgc 13894028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19147011 - 19147063
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| ||| |||| |||||||||| ||| ||||| ||||||||||||||||||    
T  19147011 tctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgc 19147063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24506705 - 24506653
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| | |||||||||| || | ||| ||||||||||||||||||    
T  24506705 tctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgc 24506653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25295010 - 25295062
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| ||||||||||||||||||| ||| | ||| ||||| ||||||||||||    
T  25295010 tctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgc 25295062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29762212 - 29762160
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| |||||||| |||||||||| ||| | ||| ||||||||||||||||||    
T  29762212 tctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgc 29762160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47749162 - 47749114
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||| |||||| |||||||||||| ||||| | ||||||||||||    
T  47749162 tctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccg 47749114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48342070 - 48342122
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| || ||||||||| ||||||||| ||| |||||||| |||||    
T  48342070 tctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgc 48342122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50753398 - 50753346
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||| |||||||||||  |||| ||| ||||||||||||||||||    
T  50753398 tctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgc 50753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51060338 - 51060286
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| | |||||||||| ||| | ||| ||||||||||||||||||    
T  51060338 tctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgc 51060286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54237498 - 54237550
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||| ||||| ||| | ||  ||||||||||||||||||    
T  54237498 tctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgc 54237550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5504082 - 5504132
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  5504082 tctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggt 5504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10173028 - 10172976
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  10173028 tctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgc 10172976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31576604 - 31576552
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  31576604 tctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgc 31576552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 14254323 - 14254278
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  14254323 tacgcatgagccggattagtcgtccacctttgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3850799 - 3850747
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||| ||||||||||||||| |||| |||||||||||||||||||    
T  3850799 tctacgcacgaggcggattagtcgcccacctttaatgggtcggaaaccggtgc 3850747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26325863 - 26325915
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  26325863 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 26325915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26660189 - 26660240
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  26660189 tctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgc 26660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34697386 - 34697434
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  34697386 tctacgcatgagccggattagtcgcccacttttgatgggttggaaaccg 34697434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50371891 - 50371839
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||||||||||||    
T  50371891 tctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgc 50371839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 6899619 - 6899661
Alignment:
Q  11 agccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  6899619 agccggattagtcgcccacctttgatggatcggaaaccggtgc 6899661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 9659234 - 9659184
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||    
T  9659234 tacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgc 9659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 32142901 - 32142855
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  32142901 tacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccg 32142855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 44969716 - 44969766
Alignment:
Q  2 ctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||||||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  44969716 ctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtg 44969766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 1764253 - 1764208
Alignment:
Q  2 ctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  1764253 ctacgcatgaggcggattagtcgcccacctttgataggtcggaaac 1764208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 37339874 - 37339923
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  37339874 acgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgc 37339923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 892355 - 892307
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||||| ||| ||||||| ||||||    
T  892355 cgcatgagccggattagtcgcccacctttggtggatcggaaatcggtgc 892307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4581739 - 4581687
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||| |||||| ||| ||||| ||||||||||||||||||    
T  4581739 tctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgc 4581687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8764042 - 8764094
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| | ||| ||||||||||||||||||    
T  8764042 tctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgc 8764094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10422839 - 10422891
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| ||||| |  |||||||||||||||    
T  10422839 tctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgc 10422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11397946 - 11397894
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||| ||| ||||| ||||||||||| ||||||    
T  11397946 tctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgc 11397894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17642061 - 17642009
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| ||||| |||||||||||| |||||    
T  17642061 tctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgc 17642009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30927784 - 30927732
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| |||  |||| |||||| |||||||||||    
T  30927784 tctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41663913 - 41663861
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||| ||| | ||| ||||||||||||||||||    
T  41663913 tctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgc 41663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43959878 - 43959826
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||  ||| ||||||||||||||    
T  43959878 tctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgc 43959826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 51437512 - 51437560
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  51437512 cgcatgagccggattagtcatccacctttggtgggtcggaaaccggtgc 51437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 34878626 - 34878669
Alignment:
Q  10 gagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  34878626 gagccggattagtcacccacctttgatgggtcggaaatcggtgc 34878669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35211229 - 35211178
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    ||||||||||||| | |||||||| ||| ||||| |||||||||||||||||    
T  35211229 tctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtg 35211178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 32150977 - 32150931
Alignment:
Q  3 tacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||| ||||||||| || ||||||||||||| ||||||    
T  32150977 tacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccg 32150931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33498896 - 33498846
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| ||| ||||    
T  33498896 tctacgcatgagccggattagtcgtccacctttgatggatcgtaaagcggt 33498846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 17389825 - 17389874
Alignment:
Q  4 acgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||| |||||||||| ||||   |||||||||||||||||||||    
T  17389825 acgcatgagctggattagtcgtccattgctgatgggtcggaaaccggtgc 17389874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38791667 - 38791630
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgg 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  38791667 tctacgcatgagccgaattagtcgtccatctttgatgg 38791630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 45536784 - 45536825
Alignment:
Q  12 gccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  45536784 gccggattagtcgcccaccaatgatgggtcggaaaccggtgc 45536825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8905216 - 8905168
Alignment:
Q  5 cgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||||||||||    
T  8905216 cgcatgagccagattaatcgaccacctttgattggtcggaaaccggtgc 8905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10336567 - 10336615
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    |||||||||||||||||||| ||| ||| ||||||||| ||| ||||||    
T  10336567 tctacgcatgagccggattaatcgtccacctttgatggatcgaaaaccg 10336615  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16263596 - 16263648
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||| ||||||| |||||| |||  |||||||| ||||||||||||||    
T  16263596 tctacgcataagccggaatagtcgtccacttttgatggatcggaaaccggtgc 16263648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16956517 - 16956569
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||| | || ||||| ||||||||||||| ||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgc 16956569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18915918 - 18915970
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| || | ||| ||||| ||||||||||||    
T  18915918 tctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgc 18915970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38859173 - 38859121
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||| | ||||| ||||||| ||||||||||||| ||||||||||    
T  38859173 tctacgcacgagtcagattaatcgcccacctttgatgggtcgaaaaccggtgc 38859121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40288534 - 40288482
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| || |||||||||||||||| |||| ||| ||||||||||||| ||||    
T  40288534 tctacacacgagccggattagtcgctcatccttggtgggtcggaaaccagtgc 40288482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 40702585 - 40702617
Alignment:
Q  21 gtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||||||||    
T  40702585 gtcgcccacctttgatgggtcggaaaccggtgc 40702617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49078165 - 49078217
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || | ||| | ||||||||||||||||    
T  49078165 tctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgc 49078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50094955 - 50095007
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||| ||| | ||  ||||||||||||||||||    
T  50094955 tctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgc 50095007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6908 - 6960
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  6908 tctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 224370 - 224422
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  224370 tctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgc 224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 186570 - 186621
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtg 52  Q
    |||||||| |||||||||||||||  |||||||  |||||||||||||||||    
T  186570 tctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtg 186621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42888 - 42836
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  42888 tctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 42836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9495 - 9547
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||  |||||||| ||| ||||| |||||| |||||||||||    
T  9495 tctacgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgc 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5029871 - 5029923
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  5029871 tctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgc 5029923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5253279 - 5253227
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  5253279 tctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgc 5253227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8932715 - 8932767
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  8932715 tctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgc 8932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8938765 - 8938817
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  8938765 tctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgc 8938817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8944181 - 8944233
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  8944181 tctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgc 8944233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9633681 - 9633629
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  9633681 tctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 9633629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14326051 - 14326103
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  14326051 tctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgc 14326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14419061 - 14419113
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  14419061 tctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgc 14419113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17114953 - 17114901
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  17114953 tctacgcatgagccggattagtcgcccacctttgataggtcggaaatcggtgc 17114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6606153 - 6606101
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  6606153 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 6606101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8612030 - 8611978
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  8612030 tctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgc 8611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13391340 - 13391392
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||||||| ||| |||||||| ||||||||||    
T  13391340 tctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtgc 13391392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14107414 - 14107362
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||||||  ||  ||||||||||||||||||    
T  14107414 tctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgc 14107362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14783476 - 14783424
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  14783476 tctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 14783424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30788909 - 30788857
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  30788909 tctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 30788857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34954675 - 34954628
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaacc 48  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  34954675 tctacgcatgagccagattagtcgtccacctttgatgggtcggaaacc 34954628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29444821 - 29444775
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaac 47  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||    
T  29444821 tctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2271359 - 2271307
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| ||| |||||||||||| |||||| ||||    
T  2271359 tctacgcacgagccggattagtcgtccacctttgatgggtcagaaaccagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19089552 - 19089604
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||| | | ||||| ||||||||||||||||||    
T  19089552 tctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgc 19089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21898702 - 21898754
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||||||||||||  || ||||  ||||||||||||||||||    
T  21898702 tctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 21898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30410499 - 30410547
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  30410499 tctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccg 30410547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 3601147 - 3601190
Alignment:
Q  10 gagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||    
T  3601147 gagccggattagtcgtccacctttggtgggtcggaaaccggtgc 3601190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15643890 - 15643840
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||||||| ||||||||||||||| ||||  ||||||| ||||||||    
T  15643890 tctacgcatgagtcggattagtcgcccacctttagtgggtcgaaaaccggt 15643840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33940065 - 33940114
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccgg 50  Q
    ||||| || ||||||||||||||| |||||||||| |||||| |||||||    
T  33940065 tctacacacgagccggattagtcgtccatctttgacgggtcgaaaaccgg 33940114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 1928419 - 1928447
Alignment:
Q  6 gcatgagccggattagtcgcccatctttg 34  Q
    |||||||||||||||||||||||||||||    
T  1928419 gcatgagccggattagtcgcccatctttg 1928447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8149853 - 8149801
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||| ||||| |||||||| ||| ||||| ||||| ||||||||||||    
T  8149853 tctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgc 8149801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12606484 - 12606536
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| || |  ||||||||||||    
T  12606484 tctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgc 12606536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12635868 - 12635920
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||  ||||||||||||||||||   ||| ||||||||||||||||||    
T  12635868 tctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgc 12635920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13036060 - 13036008
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||| ||||||||| |||   ||| ||||||||||||||||||    
T  13036060 tctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgc 13036008  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13468987 - 13469039
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||| ||||||||||||| | ||| ||||| ||||||||||||    
T  13468987 tctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgc 13469039  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 13584497 - 13584453
Alignment:
Q  6 gcatgagccggattagtcgcccatctttgatgggtcggaaaccgg 50  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||||    
T  13584497 gcatgagccggattaatcgtccacctttggtgggtcggaaaccgg 13584453  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41097 - 41147
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    |||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  41097 tctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

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Target: scaffold0376 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12723 - 12775
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| || |||||||||||||||| |||||||||||| |||||||||||    
T  12723 tctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgc 12775  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 155767 - 155715
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||| |||||||    
T  155767 tctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgc 155715  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 68567 - 68619
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  68567 tctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgc 68619  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1670 - 1618
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||||  |||||||||||| ||||| ||||||| ||||||||||    
T  1670 tctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgc 1618  T

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Target: scaffold0209 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12626 - 12678
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||| ||||||||||||||| ||||||||| |  |||||||||||    
T  12626 tctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgc 12678  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17443 - 17491
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccg 49  Q
    ||||| || ||||||||||||||||||| | ||||||||||||||||||    
T  17443 tctacacacgagccggattagtcgcccaccattgatgggtcggaaaccg 17491  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8757 - 8705
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| |||||||||| ||| ||||| |||||||||||| |||||    
T  8757 tctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgc 8705  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 623 - 675
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||| ||||||| |||||||||| || ||||| ||||||||||||||||||    
T  623 tctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgc 675  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 319475 - 319527
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||| |||||||| |||||||||| ||| ||||| |||| |||||||||||||    
T  319475 tctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgc 319527  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 95035 - 94984
Alignment:
Q  3 tacgcatgagccggattagtcgcccatc-tttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||||| | |||| ||||||||||| ||||||    
T  95035 tacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgc 94984  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7891 - 7841
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggt 51  Q
    ||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||    
T  7891 tctacgcattagctggattagtcgcccacctttggtggatcggaaaccggt 7841  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19308 - 19360
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||||||||||||||||||| ||||  ||  ||| ||||||||||||||    
T  19308 tctacgcatgagccggattagtcggccattattagtggatcggaaaccggtgc 19360  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 58089 - 58037
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||  |||||||||||| ||||||| ||| ||||| ||||||||    
T  58089 tctacgcatgagttggattagtcgcctatctttggtggatcggataccggtgc 58037  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 250081 - 250029
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    |||||||| |||||||||||||||| |  ||||| ||||||||||| ||||||    
T  250081 tctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgc 250029  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 65208 - 65156
Alignment:
Q  1 tctacgcatgagccggattagtcgcccatctttgatgggtcggaaaccggtgc 53  Q
    ||||||||||||| ||||||||||| ||  |||||| | ||||||||||||||    
T  65208 tctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgc 65156  T

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