View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11603_low_9 (Length: 452)
Name: NF11603_low_9
Description: NF11603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11603_low_9 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 405; Significance: 0; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 20 - 440
Target Start/End: Complemental strand, 4517874 - 4517454
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
4517874 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacctttgtcaacaccgaatacaatcac |
4517775 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4517774 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
4517675 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaa |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4517674 |
gtgatgttagtcaagacattatctctctttccgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaa |
4517575 |
T |
|
| Q |
320 |
tgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaacatggtttacctagtgttctattt |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4517574 |
tgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaacatggtttacctagtgttctattt |
4517475 |
T |
|
| Q |
420 |
agttcagctagtgcatgttca |
440 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4517474 |
agttcagctagtgcatgttca |
4517454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 4569604 - 4569264
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| |
|
|
| T |
4569604 |
atatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa----atcac |
4569509 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
4569508 |
aaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaaggttatg |
4569409 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagactt-aaagattcttcca |
318 |
Q |
| |
|
||||| |||||||||| ||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
4569408 |
gtgatattagtcaagaaattgtctctcttgatgattcaataagaaagaatttctatcaccctttttgtgaacttcttgctaaacttaaaagattcttcca |
4569309 |
T |
|
| Q |
319 |
atgatggtcatattcctcctgttagttgcttagtttctgatattg |
363 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4569308 |
atgatgatcttattcctcctgttagttgcttagtttctgatattg |
4569264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 20 - 396
Target Start/End: Complemental strand, 4581548 - 4581172
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||| ||||||| ||| || ||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
4581548 |
atatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcac |
4581449 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581448 |
aaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatggtttaactccgatagaaggcgata |
4581349 |
T |
|
| Q |
220 |
gtgatgttagtcaagacat-tatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttcca |
318 |
Q |
| |
|
||||||||| ||||||||| ||| |||| | ||| ||||| |||||||| ||| || || || ||||||||||||||||||||||| || ||| ||| |
|
|
| T |
4581348 |
gtgatgttaatcaagacatatat-gctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttcttgctagacttaatgactctgcca |
4581250 |
T |
|
| Q |
319 |
atgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaac |
396 |
Q |
| |
|
| ||||| | | ||||| |||| |||| |||||||||||| | | || |||||| ||||||||||||||||||| |
|
|
| T |
4581249 |
cttctggtcttgtccctccagttacttgcatagtttctgataatagcatgtattttacaatacaagctgctgaagaac |
4581172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 20 - 355
Target Start/End: Complemental strand, 4623841 - 4623506
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||| ||||||||||| ||||| ||||||||||| |||||| |||||| ||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
4623841 |
atatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacctttggtcacaccgaatacaatcac |
4623742 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||| ||||||||||||||||| || || ||||| |||| |
|
|
| T |
4623741 |
aaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggtttaacaccaatggaaggtgatg |
4623642 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaa |
319 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | |||| | || ||| ||| |
|
|
| T |
4623641 |
gtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatcccttttgtgaacttcttgcaaaacttcatgactctgccac |
4623542 |
T |
|
| Q |
320 |
tgatggtcatattcctcctgttagttgcttagtttc |
355 |
Q |
| |
|
|| ||||| | |||| || |||| |||||||||||| |
|
|
| T |
4623541 |
tgctggtcttgttccaccagttacttgcttagtttc |
4623506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 20 - 396
Target Start/End: Complemental strand, 4558659 - 4558283
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| | || ||||| |||||||| ||| |
|
|
| T |
4558659 |
atatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacctatgtaaacactgaatacaaccac |
4558560 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | || || |||| |
|
|
| T |
4558559 |
aaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatggtttaactccaacggatggtgatg |
4558460 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaa |
319 |
Q |
| |
|
| |||||||||||||||||| | |||||| | | ||||| |||||||| ||| || || ||| | ||||||||||||||||| || || ||| | | |
|
|
| T |
4558459 |
gcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgctagactaaatgactctgcaac |
4558360 |
T |
|
| Q |
320 |
tgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaac |
396 |
Q |
| |
|
||||| | | ||||| |||| |||| |||||||||||||||| || ||||||| ||||||||| ||||||||| |
|
|
| T |
4558359 |
atctggtcttgtccctccagttacttgcatagtttctgatattggcatgtcttttaccatacaagcttctgaagaac |
4558283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 23 - 399
Target Start/End: Complemental strand, 4627681 - 4627305
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||||||||||||||||||||||| ||||| | |||||||||| | |||||||||||||||||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
4627681 |
tccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacctttgtcaacactgaatacaatcacaaa |
4627582 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| ||||| | |
|
|
| T |
4627581 |
cgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcg |
4627482 |
T |
|
| Q |
223 |
atgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaatga |
322 |
Q |
| |
|
|||||| ||||||||| |||||||| | |||||||||||||| ||| ||| ||||| ||||||||||||||| |||| | || || ||| || |
|
|
| T |
4627481 |
atgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaacttcttgctaaacttcatgactcagccactgc |
4627382 |
T |
|
| Q |
323 |
tggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaacatg |
399 |
Q |
| |
|
||||| | || | || |||| |||||||||||| ||| | | || | ||||| |||||||||||||||||||||| |
|
|
| T |
4627381 |
tggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctgaagaacatg |
4627305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 4612312 - 4612517
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4612312 |
atatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
4612411 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||| || || | | |||||||||| |
|
|
| T |
4612412 |
aaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggtctaccttcaaacgaaggcgatg |
4612511 |
T |
|
| Q |
220 |
gtgatg |
225 |
Q |
| |
|
|||||| |
|
|
| T |
4612512 |
gtgatg |
4612517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 4618835 - 4618620
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
4618835 |
atatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaatcac |
4618736 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| || |||||||||||||| || |||| |||||||| ||||||||||||||||| || || ||||| |||| |
|
|
| T |
4618735 |
aaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggtttaacaccaatggaaggtgatg |
4618636 |
T |
|
| Q |
220 |
gtgatgttagtcaaga |
235 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4618635 |
gtgatgttagtcaaga |
4618620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 23 - 321
Target Start/End: Complemental strand, 4594541 - 4594243
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| ||| |
|
|
| T |
4594541 |
tccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaa |
4594442 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| ||| ||||| |||||| || || ||||||||| |||| || || ||||| ||||||| |
|
|
| T |
4594441 |
cgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggtg |
4594342 |
T |
|
| Q |
223 |
atgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaatg |
321 |
Q |
| |
|
|||||||||||||||| ||||||| || | || ||||||||||||||| | | ||||| |||||||||||| | |||||||| || ||| |||||| |
|
|
| T |
4594341 |
atgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttttgtgaacttcttacaagacttaatgactctaccaatg |
4594243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 20 - 396
Target Start/End: Complemental strand, 4572500 - 4572124
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| | || ||||| |||||||||||| |
|
|
| T |
4572500 |
atatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacctatgtaaacactgaatacaatcac |
4572401 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| |||||||| |||||||||| ||| ||||||||||||||||| |||||| |||||||| |||||||||||||||| |||| | || ||||||| |
|
|
| T |
4572400 |
aaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatggtttatctccaacggatggcgatg |
4572301 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaa-tttctatcaccccttctgtgaacttcttgctagacttaaagattcttcca |
318 |
Q |
| |
|
| |||||||||||||||||| | |||||| | | ||||| || ||||| |||||| || || ||| | |||||||||||||||||||| || ||| | | |
|
|
| T |
4572300 |
gcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttcta-caacctttccgcgaacttcttgctagacttaatgactctgcaa |
4572202 |
T |
|
| Q |
319 |
atgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaac |
396 |
Q |
| |
|
||||| | | | ||| ||||||||| |||||||||||||| | || | ||||||||||||||||||||||||| |
|
|
| T |
4572201 |
catctggtcttgtccgtccagttagttgcatagtttctgatattagcatgtcctttactatacaagctgctgaagaac |
4572124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 23 - 396
Target Start/End: Complemental strand, 4587163 - 4586790
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||| ||||||||||| || || ||||| ||||||||||||||| |
|
|
| T |
4587163 |
tccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaaacactgaatacaatcacaaa |
4587064 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|| ||||| || ||||||| |||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| | || || ||||||| |
|
|
| T |
4587063 |
cggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaactccaacggatggtgatggtg |
4586964 |
T |
|
| Q |
223 |
atgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaatga |
322 |
Q |
| |
|
||||||||||||||||| | |||||| | | ||||| |||||||| ||| || || ||| | |||||||||||||||||||| || ||| | | |
|
|
| T |
4586963 |
atgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgctagacttaatgactctgcaacatc |
4586864 |
T |
|
| Q |
323 |
tggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaac |
396 |
Q |
| |
|
||||| ||| ||||| || | ||| |||||||||||||| || | ||||||||||||||||||||||||| |
|
|
| T |
4586863 |
tggtcttatccctccagtcacttgtatagtttctgatattaccatgtcctttactatacaagctgctgaagaac |
4586790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 235
Target Start/End: Original strand, 4488794 - 4489006
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||||||||||||| | ||||| ||||||| |||||| |||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
4488794 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacctttgtcaacactgaatacaatcacaaa |
4488893 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| | ||| || ||||| | |
|
|
| T |
4488894 |
cgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatggtttaactccaacagatggtgatggcg |
4488993 |
T |
|
| Q |
223 |
atgttagtcaaga |
235 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4488994 |
atgttagtcaaga |
4489006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 3173537 - 3173321
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||| | ||||| |||||||||||||| |||||| ||||||||||||||||||| || || ||||| |||||||||||| |
|
|
| T |
3173537 |
atatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaatacaatcac |
3173438 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| ||||||||||||| |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||||| | || ||||| |||| |
|
|
| T |
3173437 |
aaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggtttaacttcaatggaaggtgatg |
3173338 |
T |
|
| Q |
220 |
gtgatgttagtcaagac |
236 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3173337 |
gtgatgttagtcaagac |
3173321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 29 - 236
Target Start/End: Complemental strand, 4482390 - 4482183
Alignment:
| Q |
29 |
tcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgtttg |
128 |
Q |
| |
|
|||||||||||||||| | ||||| ||| ||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
4482390 |
tcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
4482291 |
T |
|
| Q |
129 |
ctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgtta |
228 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| || ||||| |||| ||| || | |
|
|
| T |
4482290 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaattgaaggtgatgatgaagtaa |
4482191 |
T |
|
| Q |
229 |
gtcaagac |
236 |
Q |
| |
|
|||||||| |
|
|
| T |
4482190 |
gtcaagac |
4482183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 20 - 222
Target Start/End: Original strand, 4513573 - 4513775
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | | |||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
4513573 |
atatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttgttaacaccgaatacaatcac |
4513672 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||| || || |||||||||||||| |||||| ||||||||||||||| |||||||||||||| || || ||||||| |
|
|
| T |
4513673 |
aaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggtttaactccaatggatggcgatg |
4513772 |
T |
|
| Q |
220 |
gtg |
222 |
Q |
| |
|
||| |
|
|
| T |
4513773 |
gtg |
4513775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 4507445 - 4507237
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
4507445 |
atatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgaggctttcacataacctttgttaacaccgaatacaatcac |
4507346 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| || || || |||| |
|
|
| T |
4507345 |
aaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggtttaactccaatggatggtgatg |
4507246 |
T |
|
| Q |
220 |
gtgatgtta |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
4507245 |
gtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 359
Target Start/End: Original strand, 4258770 - 4259109
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |||||||| || ||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||||| |
|
|
| T |
4258770 |
atatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacctttgtcaacactgaatataatcac |
4258869 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||| ||||||| | ||||| | ||||| |||| |
|
|
| T |
4258870 |
aaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatggtctgactccagtggaaggtgatg |
4258969 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttccaa |
319 |
Q |
| |
|
| ||||||| ||||||| | ||| |||||| | || ||||||||||| ||| ||| ||||| ||||||||||||||| |||| |||| || ||| |
|
|
| T |
4258970 |
gcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttcttgctaaacttcaagactcagccac |
4259069 |
T |
|
| Q |
320 |
tgatggtcatattcctcctgttagttgcttagtttctgat |
359 |
Q |
| |
|
| |||| | |||| ||||||| |||||||||||||||| |
|
|
| T |
4259070 |
tactggtattgttccacctgttacttgcttagtttctgat |
4259109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 4603644 - 4603357
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||| |
|
|
| T |
4603644 |
atatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatcac |
4603545 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| || || ||||||||||||| |||||| || || |||||||| |||| ||||| ||||| |||| |
|
|
| T |
4603544 |
aaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaacaccgatggaaggtgatg |
4603445 |
T |
|
| Q |
220 |
gtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaa |
307 |
Q |
| |
|
| ||||||||||||| | ||| ||||| | || ||||||||||||||| | | ||||| |||||||||||| | |||||||| |
|
|
| T |
4603444 |
ataatgttagtcaagatgtaccttctatttctcaatctataagaaagaatttccttaaacccttttgtgaacttcttacaagacttaa |
4603357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 4575986 - 4575773
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||||||||||||| | ||||| ||| |||||||||| |||||||||||||||||||||||||| || || ||||| ||||||||||||||| |
|
|
| T |
4575986 |
tccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataacctttgttaacactgaatacaatcacaaa |
4575887 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | || || |||||| |
|
|
| T |
4575886 |
cgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatggtaatggtg |
4575787 |
T |
|
| Q |
223 |
atgttagtcaagac |
236 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
4575786 |
atgtaagtcaagac |
4575773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 4502943 - 4503103
Alignment:
| Q |
76 |
ttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttac |
175 |
Q |
| |
|
||||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
176 |
ctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagac |
236 |
Q |
| |
|
||||||||| || |||||||||||||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagac |
4503103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 4265654 - 4265869
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||||||||||||| | ||||| || |||| ||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
4265654 |
tccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcacaaa |
4265753 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|| ||||||||||||||||||||||| | |||||||||||| ||| |||| |||||||| || ||||||||| ||||||| || |||||| |||||| |
|
|
| T |
4265754 |
cgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatggtctaactccaatggaaggcaatggtg |
4265853 |
T |
|
| Q |
223 |
atgttagtcaagacat |
238 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
4265854 |
atgctactcaagacat |
4265869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 4562193 - 4561980
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataa-cattcgtcaacaccgaatacaatcacaa |
121 |
Q |
| |
|
|||| ||||||| ||||||||| | ||||| ||| |||||||||| |||||||| |||||||||||||||| | || || ||||| |||||||||||||| |
|
|
| T |
4562193 |
tccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatacaatcacaa |
4562094 |
T |
|
| Q |
122 |
acgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggt |
221 |
Q |
| |
|
||||||||| |||||||||||| ||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | || || |||||| |
|
|
| T |
4562093 |
acgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatggtgatggt |
4561995 |
T |
|
| Q |
222 |
gatgttagtcaagac |
236 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
4561994 |
gatattagtcaagac |
4561980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 23 - 235
Target Start/End: Complemental strand, 4565560 - 4565348
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||| || |||||||| ||||||||||| ||| |
|
|
| T |
4565560 |
tccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttgtcaacactgaatacaatcataaa |
4565461 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|| ||||| ||||||||||||||||| ||||| ||||||| | || |||| |||||| || || ||||||||| |||| ||||||||||| ||||||| |
|
|
| T |
4565460 |
cgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtctaacaccgatagaaggtgatggtg |
4565361 |
T |
|
| Q |
223 |
atgttagtcaaga |
235 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4565360 |
atgttagtcaaga |
4565348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 54 - 228
Target Start/End: Complemental strand, 4599663 - 4599489
Alignment:
| Q |
54 |
aaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcct |
153 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| ||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| || | |
|
|
| T |
4599663 |
aaactagcaaagattcttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctc |
4599564 |
T |
|
| Q |
154 |
ttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgtta |
228 |
Q |
| |
|
| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
4599563 |
gtaatggtttcactgatttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgtta |
4599489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 4471439 - 4471269
Alignment:
| Q |
29 |
tcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgtttg |
128 |
Q |
| |
|
|||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| |
|
|
| T |
4471439 |
tcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttg |
4471340 |
T |
|
| Q |
129 |
ctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
199 |
Q |
| |
|
||||| ||||||||||| | | |||||||||||||||| |||| ||||||||| |||||| ||||||| |
|
|
| T |
4471339 |
ctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
4471269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 100 - 399
Target Start/End: Original strand, 4298172 - 4298471
Alignment:
| Q |
100 |
tcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
199 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||||||||| | |||| |||||||||||||||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
200 |
aactccgatagaaggcgatggtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgct |
299 |
Q |
| |
|
||||| | ||||| ||||| ||||||| ||||||||| |||||||| | ||||| |||||||| ||| ||| ||||| |||||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgct |
4298371 |
T |
|
| Q |
300 |
agacttaaagattcttccaatgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaacatg |
399 |
Q |
| |
|
| |||| |||||| ||| || ||||| | | || || |||| |||||||||| ||||| || | || | ||||| ||||||||||| |||||||||| |
|
|
| T |
4298372 |
aaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatg |
4298471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 4462731 - 4462562
Alignment:
| Q |
30 |
caaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaacgtttgc |
129 |
Q |
| |
|
||||||||||||||| | ||||| ||||||| |||||| |||||||||||||| ||||||||||| || |||||||| |||||||||||||| | |||| |
|
|
| T |
4462731 |
caaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgc |
4462632 |
T |
|
| Q |
130 |
tcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
199 |
Q |
| |
|
|||| ||||||||||| || | | |||||||||||||| |||| ||||||||| |||||| ||||||| |
|
|
| T |
4462631 |
tcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatggttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 4255415 - 4255550
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| || || |||||||||||| | ||||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
4255415 |
atatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaaggcttt------------gtcaacaccgaatacaatcac |
4255502 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcact |
167 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4255503 |
aaacgcttgctcgaatcaagaggtccaaaagcctttgatggttccact |
4255550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 4483534 - 4483569
Alignment:
| Q |
109 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
4483569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 4496222 - 4496188
Alignment:
| Q |
110 |
atacaatcacaaacgtttgctcaaatcaagaggtc |
144 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggtc |
4496188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 4497850 - 4497899
Alignment:
| Q |
31 |
aaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttaga |
80 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| |||| | |||||||||||| |
|
|
| T |
4497850 |
aaggccatatcaatccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 359
Target Start/End: Original strand, 2045 - 2387
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
2045 |
atatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcat |
2144 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactcc---gatagaaggcg |
216 |
Q |
| |
|
||||| |||||||||||||||||||| || || ||||||||||| |||||||| ||| ||||||||||| |||||||||||||| | ||| | | |
|
|
| T |
2145 |
aaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatgatg |
2244 |
T |
|
| Q |
217 |
atggtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttc |
316 |
Q |
| |
|
||||| |||||||||||||||| ||||||||| | | ||||| ||||| || ||| |||| ||| | |||||||||||||||||| | || ||| | |
|
|
| T |
2245 |
atggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtctgc |
2344 |
T |
|
| Q |
317 |
caatgatggtcatattcctcctgttagttgcttagtttctgat |
359 |
Q |
| |
|
|||| ||||| ||| ||||| || | | |||||||||||||| |
|
|
| T |
2345 |
caattctggtcttatccctccagtaactagcttagtttctgat |
2387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 20 - 359
Target Start/End: Complemental strand, 2358 - 2016
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| ||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
2358 |
atatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcat |
2259 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactcc---gatagaaggcg |
216 |
Q |
| |
|
||||| |||||||||||||||||||| || || ||||||||||| |||||||| ||| ||||||||||| |||||||||||||| | ||| | | |
|
|
| T |
2258 |
aaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatgatg |
2159 |
T |
|
| Q |
217 |
atggtgatgttagtcaagacattatctctctttctgattcaataagaaagaatttctatcaccccttctgtgaacttcttgctagacttaaagattcttc |
316 |
Q |
| |
|
||||| |||||||||||||||| ||||||||| | | ||||| ||||| || ||| |||| ||| | |||||||||||||||||| | || ||| | |
|
|
| T |
2158 |
atggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtctgc |
2059 |
T |
|
| Q |
317 |
caatgatggtcatattcctcctgttagttgcttagtttctgat |
359 |
Q |
| |
|
|||| ||||| ||| ||||| || | | |||||||||||||| |
|
|
| T |
2058 |
caattctggtcttatccctccagtaactagcttagtttctgat |
2016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 3088279 - 3088063
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||||||||||| |
|
|
| T |
3088279 |
atatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcac |
3088180 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|| |||||||| |||||||||||| | || | |||||||||||||||||||| |||||||||||| | ||||||| ||||||| || ||||| ||| |
|
|
| T |
3088179 |
aaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagatggtctaactccaatggaaggtaatg |
3088080 |
T |
|
| Q |
220 |
gtgatgttagtcaagac |
236 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3088079 |
gtgatgttagtcaagac |
3088063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 1292 - 1079
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||| |||| | |||||||| |||||||||||| |
|
|
| T |
1292 |
atatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcac |
1193 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| || || ||||||||| |||| || ||||||| |||| |
|
|
| T |
1192 |
aaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtctaacaccactagaaggtgatg |
1093 |
T |
|
| Q |
220 |
gtgatgttagtcaa |
233 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1092 |
gtgatgttagtcaa |
1079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 5e-60; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 1676055 - 1675842
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||| |||| | |||||||| |||||||||||| |
|
|
| T |
1676055 |
atatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcac |
1675956 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| || || ||||||||| |||| || ||||||| |||| |
|
|
| T |
1675955 |
aaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtctaacaccactagaaggtgatg |
1675856 |
T |
|
| Q |
220 |
gtgatgttagtcaa |
233 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1675855 |
gtgatgttagtcaa |
1675842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 20862404 - 20862587
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| || |||||||||||| |
|
|
| T |
20862404 |
atatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataacatttgtcaatactgaatacaatcac |
20862503 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaact |
203 |
Q |
| |
|
||||| ||||| || |||| ||||||| | ||||||||||||||||||| ||| ||||||||| |||||||||||| |||| |
|
|
| T |
20862504 |
aaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagatggttcaact |
20862587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 16685201 - 16685264
Alignment:
| Q |
333 |
cctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctgaagaac |
396 |
Q |
| |
|
||||| |||| |||| |||||||||||||| | || ||||||||||||||||||||||||||| |
|
|
| T |
16685201 |
cctccagttacttgcatagtttctgatattagcatgtcttttactatacaagctgctgaagaac |
16685264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 16685029 - 16685099
Alignment:
| Q |
168 |
gattttacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacat |
238 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| |||| | || || ||||| ||||||||||||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacat |
16685099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 20862664 - 20862738
Alignment:
| Q |
286 |
gtgaacttcttgctagacttaaagattcttccaatgatggtcatattcctcctgttagttgcttagtttctgata |
360 |
Q |
| |
|
||||||||||||| | |||| | || |||||||| ||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
20862664 |
gtgaacttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgata |
20862738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 1282967 - 1282754
Alignment:
| Q |
20 |
atatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcac |
119 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||| || || || || |||||||||||| |
|
|
| T |
1282967 |
atatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttgttaatactgaatacaatcac |
1282868 |
T |
|
| Q |
120 |
aaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatg |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||| |||||| || || ||||||||| |||| | ||||||| |||| |
|
|
| T |
1282867 |
aaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtctaacatcactagaaggtgatg |
1282768 |
T |
|
| Q |
220 |
gtgatgttagtcaa |
233 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1282767 |
gtgatgttagtcaa |
1282754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 24104626 - 24104411
Alignment:
| Q |
23 |
tccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaatcacaaa |
122 |
Q |
| |
|
|||| ||||||| ||||||||| | ||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
24104626 |
tccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaa |
24104527 |
T |
|
| Q |
123 |
cgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaaggcgatggtg |
222 |
Q |
| |
|
|| |||||| ||||||||| ||| || | |||||||||||| ||| |||| ||||||||| || ||||||||| ||||||| || |||||| |||||| |
|
|
| T |
24104526 |
cgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatggtctaactccaatggaaggcaatggtg |
24104427 |
T |
|
| Q |
223 |
atgttagtcaagacat |
238 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
24104426 |
atgttactcaagacat |
24104411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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