View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11607_high_4 (Length: 329)
Name: NF11607_high_4
Description: NF11607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11607_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 2164185 - 2164414
Alignment:
| Q |
18 |
tcaatttcaaacaaatgtgaaatttggctctttcttgctttaatgcataagcagaaccgaaaagagaagggaaaattttatattgcttttgaattggaat |
117 |
Q |
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| T |
2164185 |
tcaatttcaaacaaatgtgaaatttggctctttcttgctttaatgcataagcagaaccgaaaagagaagggaaaattttatattgcttttgaattggaat |
2164284 |
T |
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| Q |
118 |
aacttacatggattactaattctcatgtgattgattccattttcaatttttgtcnnnnnnntatattcatttcttttttaagtaaaattgtgatttgtgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
2164285 |
aacttacatggattactaattctcatgtgattgattccattttcaatttttgtcaaaaaaatatattcatttcttttttaagtaaaattgtgatttgtgt |
2164384 |
T |
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| Q |
218 |
tggttggaattgatgtgttatcagatattg |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
2164385 |
tggttggaattgatgtgttatcagatattg |
2164414 |
T |
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