View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1160_high_3 (Length: 399)
Name: NF1160_high_3
Description: NF1160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1160_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 10470268 - 10470124
Alignment:
| Q |
9 |
accacagaccaatccaatagtgaaagaacataaagttccagaaaagaaacatcatgatctctcaagtactcgagagttgaaatgctgctccttgctcaat |
108 |
Q |
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| T |
10470268 |
accacagaccaatccaacagtgaaagaacataaagttcctgaaaagaaacatcatgatctctcaagtactcgagagttgaaatgctgctccttgctcaat |
10470169 |
T |
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| Q |
109 |
aggtaacgtggtccgtaatacgcagcagaataaagaacgcatagc |
153 |
Q |
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| T |
10470168 |
aggtaacgtggtccgtaatacgcagcagaataaagaacgcatagc |
10470124 |
T |
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