View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1160_low_11 (Length: 268)

Name: NF1160_low_11
Description: NF1160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1160_low_11
NF1160_low_11
[»] chr6 (7 HSPs)
chr6 (69-236)||(9513337-9513503)
chr6 (71-236)||(720394-720570)
chr6 (117-202)||(5474271-5474355)
chr6 (111-236)||(24316742-24316865)
chr6 (64-205)||(11121580-11121715)
chr6 (64-109)||(31737904-31737949)
chr6 (64-100)||(5474387-5474423)
[»] chr4 (9 HSPs)
chr4 (58-218)||(22310372-22310533)
chr4 (64-236)||(34851323-34851506)
chr4 (73-202)||(34446464-34446599)
chr4 (64-199)||(2191615-2191753)
chr4 (166-205)||(37010459-37010498)
chr4 (166-205)||(19327193-19327232)
chr4 (64-113)||(1206792-1206841)
chr4 (58-109)||(19327294-19327345)
chr4 (166-236)||(29688789-29688860)
[»] chr2 (7 HSPs)
chr2 (119-236)||(9894020-9894136)
chr2 (71-236)||(31078804-31078958)
chr2 (119-205)||(30750616-30750701)
chr2 (146-201)||(30750435-30750489)
chr2 (58-108)||(30750532-30750582)
chr2 (111-236)||(27544857-27544981)
chr2 (149-205)||(9160512-9160567)
[»] chr7 (4 HSPs)
chr7 (69-191)||(15456185-15456306)
chr7 (64-236)||(21292450-21292615)
chr7 (166-205)||(37573335-37573374)
chr7 (166-217)||(5287567-5287619)
[»] chr8 (5 HSPs)
chr8 (73-202)||(11958821-11958953)
chr8 (133-236)||(3941547-3941649)
chr8 (111-214)||(17648635-17648737)
chr8 (171-236)||(8776959-8777024)
chr8 (72-151)||(3735876-3735957)
[»] chr1 (12 HSPs)
chr1 (70-234)||(15853115-15853290)
chr1 (69-236)||(32830047-32830225)
chr1 (115-202)||(36085618-36085702)
chr1 (111-201)||(18525705-18525794)
chr1 (146-201)||(1609368-1609422)
chr1 (131-205)||(1345384-1345457)
chr1 (115-201)||(9089979-9090063)
chr1 (69-156)||(10399354-10399442)
chr1 (64-108)||(18525818-18525862)
chr1 (72-113)||(5965363-5965404)
chr1 (180-236)||(14500993-14501050)
chr1 (169-205)||(5965263-5965299)
[»] chr3 (3 HSPs)
chr3 (111-236)||(587113-587236)
chr3 (79-202)||(46028460-46028593)
chr3 (111-205)||(637184-637277)
[»] scaffold0115 (1 HSPs)
scaffold0115 (62-138)||(17108-17184)
[»] chr5 (7 HSPs)
chr5 (111-205)||(6764087-6764188)
chr5 (64-185)||(32611818-32611934)
chr5 (64-236)||(17110341-17110524)
chr5 (115-205)||(29731107-29731194)
chr5 (64-108)||(6764019-6764063)
chr5 (69-139)||(16044686-16044757)
chr5 (69-113)||(29731222-29731266)
[»] scaffold0014 (2 HSPs)
scaffold0014 (131-234)||(20168-20271)
scaffold0014 (64-103)||(15864-15903)


Alignment Details
Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 9513503 - 9513337
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcgggg 168  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| | |||||| ||| | |||| |||||||||||| | |||    
T  9513503 acataaaacctgacccagtcaacaaccctaacgggcaaaaacaaaaaatgatccataaagtgggtccaacgctaaacaattataacaattaagcac-ggg 9513405  T
Q  169 tctaaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtactgtcaactacctgcaaca 236  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||  |||||| |||||||||    
T  9513404 tctaaagtttggcgaatgaatcgatcgtcaacactaatcggatcacgtaccatcaactccctgcaaca 9513337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 720570 - 720394
Alignment:
Q  71 ataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataa-----------agatccacaaagtagatccaaccctatataattctaacaatta 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||           | ||||||||||| |||||||||||| | | |||||||||||     
T  720570 ataaaacatgacccagtcaacaaccctaacgggcaaaaccaaaaaataaaaaataaaaaatccacaaagtggatccaaccctaaagatttctaacaattg 720471  T
Q  160 agcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
    ||| |||| |||||||||||||||||||| |||||||||||||| |||  ||||||||||| |||||| |||||||||    
T  720470 agctcggg-tctaaagtttggcgaatgaaccgatcgtcaacacgaaatcggatcacgtactatcaactccctgcaaca 720394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 5474355 - 5474271
Alignment:
Q  117 agatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacac 202  Q
    ||||||| ||||| |||||||||||| | |||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  5474355 agatccaaaaagtggatccaaccctaaacaattataacaattaagcgcatg-tctaaagtttggcgaatgaatcgatcgtcaacac 5474271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 24316865 - 24316742
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattaga 210  Q
    ||||||| |||||||| || |||||||||||| | |||||||||| |||| |||||| |||| |||||| |||||||| || ||||||||||||||  ||    
T  24316865 aaataaaaatccacaaggtggatccaaccctaaacaattctaaca-ttaaacgcggg-tctatagtttgtcgaatgaaccgctcgtcaacacgaatcgga 24316768  T
Q  211 tcacgtactgtcaactacctgcaaca 236  Q
    ||||||||   ||||| |||||||||    
T  24316767 tcacgtaccagcaactccctgcaaca 24316742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 11121715 - 11121580
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaac-caaataaagatccacaaagtagatccaaccctatataattctaacaattaagc 162  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||  ||| || |||||| ||| ||||||||| |||| | ||||||    ||||| |    
T  11121715 gggggacataacaattgacccagtcaacaaccctaacgggcaaaacataaaaaatgatccataaaatagatccaaacctaaacaattct----attaatc 11121620  T
Q  163 gcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
       ||||  ||||||||| ||||||||||||||||||||||||    
T  11121619 ---gggttaaaagtttggtgaatgaatcgatcgtcaacacgaa 11121580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 31737904 - 31737949
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaac 109  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  31737904 gggggacataaaacctgacccagtcaacaaccctagcgggcaaaac 31737949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 5474423 - 5474387
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaac 100  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  5474423 gggggacataaaacctgacccagtcaacaaccctaac 5474387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 22310372 - 22310533
Alignment:
Q  58 aaaataggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaa--gatccacaaagtagatccaaccctatataattctaaca 155  Q
    |||| ||||| ||||||||| |||||||||||| |||| ||||||||||||| ||| |||  |||||||||||| ||| |||||||| | ||||||||||    
T  22310372 aaaacagggggacataaaacctgacccagtcaataaccttaacgggcaaaacaaaaaaaaaagatccacaaagtggattcaaccctaaaaaattctaaca 22310471  T
Q  156 attaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtac 218  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| |||| ||||  ||||||||||    
T  22310472 attaagcgc-gggtctaaagtttagcgaatgaatcaatcgttaacatgaatcggatcacgtac 22310533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 34851323 - 34851506
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataa-----------agatccacaaagtagatccaaccctatataattcta 152  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||           | ||||||||||| |||||||||||| | | |||||    
T  34851323 gggggacataaaacctgacccagtcaacaaccttaacgggcaaaaccaaaaaataaaaaataaaaaatccacaaagtggatccaaccctaaagatttcta 34851422  T
Q  153 acaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
    |||||| ||| |||  |||||||||||||||||||| |||||||||||||| ||| |||||||||||  |||||| |||||||||    
T  34851423 acaattgagctcgga-tctaaagtttggcgaatgaaccgatcgtcaacacgaaatcagatcacgtaccatcaactccctgcaaca 34851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 34446464 - 34446599
Alignment:
Q  73 aaaacttgacccagtcaacaaccctaacgggcaaaaccaaat-------aaagatccacaaagtagatccaaccctatataattctaacaattaagcgcg 165  Q
    ||||||||||||||||||||||||||||||||||||  |||        ||| ||||||||||| |||||||||||| | || |||||||||| ||||      
T  34446464 aaaacttgacccagtcaacaaccctaacgggcaaaaataaaataaaataaaaaatccacaaagtggatccaaccctaaacaaatctaacaatttagcg-t 34446562  T
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacac 202  Q
    |||||||||||||||| ||||||| ||||||| ||||    
T  34446563 gggtctaaagtttggcaaatgaattgatcgtcgacac 34446599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 2191615 - 2191753
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataa----agatccacaaagtagatccaaccctatataattctaacaatta 159  Q
    |||| ||||||||| |||||||||||||||||||||||  |||||||||| ||    | ||| |||||||||||||||||||| | | |||||||||||     
T  2191615 gggggacataaaacctgacccagtcaacaaccctaacgaacaaaaccaaaaaataaaaaatctacaaagtagatccaaccctaaagatttctaacaattg 2191714  T
Q  160 agcgcggggtctaaagtttggcgaatgaatcgatcgtcaa 199  Q
    ||| |  | ||||||||||||  ||| || ||||||||||    
T  2191715 agctc-agatctaaagtttggtaaataaaccgatcgtcaa 2191753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 37010459 - 37010498
Alignment:
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37010459 gggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 37010498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 19327232 - 19327193
Alignment:
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19327232 gggtctaaagtttggtgaatgaatcgatcgtcaacacgaa 19327193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 1206841 - 1206792
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaa 113  Q
    |||| ||| ||||| ||| |||||||||||||||||||||||||||||||    
T  1206841 gggggacaaaaaacctgatccagtcaacaaccctaacgggcaaaaccaaa 1206792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 19327345 - 19327294
Alignment:
Q  58 aaaataggggaacataaaacttgacccagtcaacaaccctaacgggcaaaac 109  Q
    ||||| |||| ||||||||| ||| ||||||||||||||||| |||||||||    
T  19327345 aaaattgggggacataaaacctgaaccagtcaacaaccctaatgggcaaaac 19327294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 29688789 - 29688860
Alignment:
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacacgaattaga-tcacgtactgtcaactacctgcaaca 236  Q
    |||| |||||||||| ||||||| |||||||||||||||| | || ||||||||  |||||| |||||||||    
T  29688789 gggtttaaagtttggtgaatgaaacgatcgtcaacacgaaatcgattcacgtaccatcaactccctgcaaca 29688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 9894136 - 9894020
Alignment:
Q  119 atccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtac 218  Q
    ||||||| ||| |||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| |    
T  9894136 atccacatagtggatccaaccctaaacaattctaacaattaagcgcgggg-ctaaagtttgtcgaatgaatcgatcgtcaacacgaatcagatcacgtgc 9894038  T
Q  219 tgtcaactacctgcaaca 236  Q
      |||||| |||||||||    
T  9894037 catcaactccctgcaaca 9894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 31078804 - 31078958
Alignment:
Q  71 ataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtc 170  Q
    |||||||  ||| |||||||||||||||||||||||| | ||| ||||||||||||||| ||| ||||||||         |||||||||||||||| ||    
T  31078804 ataaaacccgactcagtcaacaaccctaacgggcaaacctaaa-aaagatccacaaagtggattcaacccta---------aacaattaagcgcggg-tc 31078892  T
Q  171 taaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtactgtcaactacctgcaaca 236  Q
    ||||||||||||||| ||| |||||||||||||||| |||||| ||||  |||||| |||||||||    
T  31078893 taaagtttggcgaataaattgatcgtcaacacgaatcagatcatgtaccatcaactccctgcaaca 31078958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 30750616 - 30750701
Alignment:
Q  119 atccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||| | |||||| ||| | || ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  30750616 atccacaaagtgggtccaacactaaacaaatctaacaattaagcgcggg-tctgaagtttggcgaatgaatcgatcgtcaacacgaa 30750701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 30750435 - 30750489
Alignment:
Q  146 aattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaaca 201  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  30750435 aattctaacaattaagcgtgag-tctaaagtttggcgaatgaatcgatcgtcaaca 30750489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 30750532 - 30750582
Alignment:
Q  58 aaaataggggaacataaaacttgacccagtcaacaaccctaacgggcaaaa 108  Q
    ||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  30750532 aaaattgggggacataaaatctgacccagtcaacaaccctaacgggcaaaa 30750582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 27544857 - 27544981
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattaga 210  Q
    ||||||| ||||| ||| | ||| |||||||| | | || |||||||||||| | || | |||| |||||| |||||| ||| |||||||||||| | ||    
T  27544857 aaataaaaatccaaaaaatggattcaaccctaaacatttgtaacaattaagctcaggtt-taaaatttggcaaatgaaccgaccgtcaacacgaaatgga 27544955  T
Q  211 tcacgtactgtcaactacctgcaaca 236  Q
    |||| |||  |||||| |||||||||    
T  27544956 tcacataccatcaactccctgcaaca 27544981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 9160567 - 9160512
Alignment:
Q  149 tctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||||||||  | |||||||||||||||| |||| ||| |||||||||||    
T  9160567 tctaacaattaagcgcatg-tctaaagtttggcgaacgaattgattgtcaacacgaa 9160512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 15456185 - 15456306
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcgggg 168  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||| || |||||||||||| | | |||||||| | ||||||||||||||||| | |||    
T  15456185 acataaaacatgacccagtcaacaatcctaacgggcaaaaacaaaaaacgatccacaaagtgggtgcaaccctaaacaattctaacaattaagcac-ggg 15456283  T
Q  169 tctaaagtttggcgaatgaatcg 191  Q
    | |||||||||||||||||||||    
T  15456284 tttaaagtttggcgaatgaatcg 15456306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 236
Target Start/End: Complemental strand, 21292615 - 21292450
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaaccctatataattctaacaattaagcg 163  Q
    |||| |||| |||| ||||||||||||||||| ||||| |||||| |||| ||| ||||||||||| ||||  |||||| | ||||||    ||||||      
T  21292615 gggggacattaaacctgacccagtcaacaaccataacgagcaaaa-caaaaaaaaatccacaaagtggatctgaccctaaacaattct----attaag-- 21292523  T
Q  164 cggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
      |||||||||||||| ||||||||||||||||||| | | |||  ||||||| ||| |||||| |||||||||    
T  21292522 -agggtctaaagtttgacgaatgaatcgatcgtcaaaatgaaatcggatcacgcactatcaacttcctgcaaca 21292450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 37573335 - 37573374
Alignment:
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  37573335 gggtctaaagtttggcgaatgaatcgatcctcaacacgaa 37573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 5287567 - 5287619
Alignment:
Q  166 gggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgta 217  Q
    ||||||| | |||||||||||||||||||||||||||| ||| ||||||||||    
T  5287567 gggtctatattttggcgaatgaatcgatcgtcaacacgaaatcagatcacgta 5287619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 11958953 - 11958821
Alignment:
Q  73 aaaacttgacccagtcaacaaccctaacgggcaaaacca----aataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcgggg 168  Q
    ||||| |||||||||||||||||||||||| |||||| |    || ||||||||||||||| |||||||||||| | || |||||||||||||||| |||    
T  11958953 aaaacctgacccagtcaacaaccctaacggacaaaacaaaaataaaaaagatccacaaagtggatccaaccctaaacaaatctaacaattaagcgc-ggg 11958855  T
Q  169 tctaaagtttggcgaatgaatcgatcgtcaacac 202  Q
    |||||||||||| |||||||| |||| |||||||    
T  11958854 tctaaagtttggtgaatgaatagatcatcaacac 11958821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 3941547 - 3941649
Alignment:
Q  133 tccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtactgtcaactacctgc 232  Q
    |||||||||| | ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||  ||||| |||   |||||| |||||    
T  3941547 tccaaccctaaacaattctaacaattaaacgcggg-tctaaagcttggcgaatgaatcgatcgtcaacacaaatcggatcatgtatcatcaacttcctgc 3941645  T
Q  233 aaca 236  Q
    ||||    
T  3941646 aaca 3941649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 17648635 - 17648737
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattaga 210  Q
    ||||||| |||||| ||||| | |||||| || | | ||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||| ||    
T  17648635 aaataaaaatccacgaagtaaaaccaaccttaaacatttctaacaactaagctcggg-tctaaagtttggcgaatgaaccgatcgtcaacacaaattgga 17648733  T
Q  211 tcac 214  Q
    ||||    
T  17648734 tcac 17648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 8776959 - 8777024
Alignment:
Q  171 taaagtttggcgaatgaatcgatcgtcaacacgaattagatcacgtactgtcaactacctgcaaca 236  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||  |||||  |||||||||    
T  8776959 taaagtttggcgaatgaatcgatcgtcaacatgaatcggatcacgtaccatcaaccccctgcaaca 8777024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 3735957 - 3735876
Alignment:
Q  72 taaaacttgacccagtcaacaaccctaacgggcaaaac--caaataaagatccacaaagtagatccaaccctatataattct 151  Q
    |||||||||||||||||||||||||||| || ||||||   ||| ||| | ||||||||| ||| |||||||| | ||||||    
T  3735957 taaaacttgacccagtcaacaaccctaatggacaaaacattaaaaaaaaacccacaaagtggattcaaccctagacaattct 3735876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 234
Target Start/End: Original strand, 15853115 - 15853290
Alignment:
Q  70 cataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataa-----------agatccacaaagtagatccaaccctatataattctaacaatt 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||           | ||||||||||| |||||||||||| | | |||||||||||    
T  15853115 cataaaacctgacccagtcaacaaccctaacgggcaaaaccaaaaaataaaaaataaaaaatccacaaagtggatccaaccctaaagatttctaacaatt 15853214  T
Q  159 aagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaa 234  Q
     ||| |||| |||||| ||||||||||||| |||||||||||||| |||| ||||||||||  |||||| |||||||    
T  15853215 gagctcggg-tctaaaatttggcgaatgaaccgatcgtcaacacgaaattggatcacgtaccatcaactccctgcaa 15853290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 32830225 - 32830047
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataa-----------agatccacaaagtagatccaaccctatataattctaacaat 157  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||           | ||||||||||| ||||||||| || | | ||||||||||    
T  32830225 acataaaacctgacccagtaaacaaccctaacgggcaaaaccaaaaaataaaaaataaaaaatccacaaagtggatccaaccttaaagatttctaacaat 32830126  T
Q  158 taagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
    | ||| |||| ||||||||||| |||||||| |||||||||||||| |||  ||||||||||  |||||| |||||||||    
T  32830125 tgagctcggg-tctaaagtttgacgaatgaaccgatcgtcaacacgaaatcggatcacgtaccatcaactccctgcaaca 32830047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 36085618 - 36085702
Alignment:
Q  115 aaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacac 202  Q
    ||||| ||||||||||||||||||  || | ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||    
T  36085618 aaagacccacaaagtagatccaactttaaacaattctaacaaataagcg---ggtctaaagtttggcgaatgaatcgatcgtcaacac 36085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 18525794 - 18525705
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaaca 201  Q
    ||||||| ||||||| ||| |||| ||||||| | || |||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  18525794 aaataaaaatccacacagtggatctaaccctaaacaaatctaacaattaagcgcagg-tctaaagtttggcgaataaatcgatcgtcaaca 18525705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 1609422 - 1609368
Alignment:
Q  146 aattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaaca 201  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  1609422 aattctaacaattaagcgtgag-tctaaagtttggcgaatgaatcgatcgtcaaca 1609368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 1345384 - 1345457
Alignment:
Q  131 gatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    |||||||||||| | ||||  |||||||||  ||||| |||||| ||||||||||||||||||||||||||||||    
T  1345384 gatccaaccctaaacaatttcaacaattaaatgcggg-tctaaactttggcgaatgaatcgatcgtcaacacgaa 1345457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 9090063 - 9089979
Alignment:
Q  115 aaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaaca 201  Q
    ||||||||||||||| |||||||||||| | |||| |||||||||||| | | |||||||| |||| ||||||| ||||||||||||    
T  9090063 aaagatccacaaagtggatccaaccctaaacaattttaacaattaagctc-gagtctaaag-ttggtgaatgaaacgatcgtcaaca 9089979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 10399354 - 10399442
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaacc-aaataaagatccacaaagtagatccaaccctatataattctaacaa 156  Q
    |||||||||  |||||| | |||||||||||| ||||||||  ||| ||||||||||||||| |||||||||||| | |||| ||||||    
T  10399354 acataaaacccgacccaattaacaaccctaacaggcaaaacataaaaaaagatccacaaagtggatccaaccctaaacaattataacaa 10399442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 18525862 - 18525818
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaa 108  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  18525862 gggggacataaaacctgacccagtcaacaaccctaacgggcaaaa 18525818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 5965404 - 5965363
Alignment:
Q  72 taaaacttgacccagtcaacaaccctaacgggcaaaaccaaa 113  Q
    |||||| |||||||||||||||||||||  ||||||||||||    
T  5965404 taaaacctgacccagtcaacaaccctaataggcaaaaccaaa 5965363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 14501050 - 14500993
Alignment:
Q  180 gcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
    |||||||||||||||||||||||| ||| |||||||||||  |||||| ||| |||||    
T  14501050 gcgaatgaatcgatcgtcaacacgaaatcagatcacgtacaatcaactccctacaaca 14500993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 5965299 - 5965263
Alignment:
Q  169 tctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  5965299 tctaaattttggcgaatgaaccgatcgtcaacacgaa 5965263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 587113 - 587236
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattaga 210  Q
    ||||||| |||||||| || |||||||||||| | |||||||||| ||||||||||| ||||||||||| |||||||| || ||||||||||||||  ||    
T  587113 aaataaaaatccacaaggtggatccaaccctaaacaattctaaca-ttaagcgcggg-tctaaagtttgtcgaatgaaccgctcgtcaacacgaatcgga 587210  T
Q  211 tcacgtactgtcaactacctgcaaca 236  Q
    ||||||||   ||||| |||||||||    
T  587211 tcacgtaccagcaactccctgcaaca 587236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 46028593 - 46028460
Alignment:
Q  79 tgacccagtcaacaaccctaacgggcaaaaccaaataa-----------agatccacaaagtagatccaaccctatataattctaacaattaagcgcggg 167  Q
    ||||||||||||||||||||||||||||||||||| ||           | ||||||||||| |||||||||||| | | ||||||||||| ||| ||||    
T  46028593 tgacccagtcaacaaccctaacgggcaaaaccaaaaaataaaaaataaaaaatccacaaagtggatccaaccctaaagatttctaacaattgagctcggg 46028494  T
Q  168 gtctaaagtttggcgaatgaatcgatcgtcaacac 202  Q
     |||||||||||||||||||| |||||||||||||    
T  46028493 -tctaaagtttggcgaatgaaccgatcgtcaacac 46028460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 637184 - 637277
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||| ||||||||||||||| |||||||| | | || |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||    
T  637184 aaataaatatccacaaagtagattcaaccctaaacagttataacaattaagcacggg-tctaaagtttgacgagtgaatcgatcgtcaacacgaa 637277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 17108 - 17184
Alignment:
Q  62 taggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaac 138  Q
    ||||| |||||||||| | ||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  17108 tagggaaacataaaacctaacccagtcaacaaccctaatgggaaaaaccaaataaagatccataaagtggatccaac 17184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 6764087 - 6764188
Alignment:
Q  111 aaataaagatccacaaagtagatccaaccctatataattctaacaattaagcgcgg-------ggtctaaagtttggcgaatgaatcgatcgtcaacacg 203  Q
    ||||||| ||||||||||| |||||||||||| | || |||||||||||||||| |       ||||||||||||||||||||||||||| |||||||||    
T  6764087 aaataaaaatccacaaagtggatccaaccctaaacaaatctaacaattaagcgcagaagcgcgggtctaaagtttggcgaatgaatcgattgtcaacacg 6764186  T
Q  204 aa 205  Q
    ||    
T  6764187 aa 6764188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 32611818 - 32611934
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaaccaaataaagatccacaaagtagatccaaccctatataattctaacaattaagcg 163  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||| |    ||| ||||||||||| ||||||||| || | | ||||||||||| |||     
T  32611818 gggggacataaaacctgatccagtaaacaaccctaacgggcaaaatc----aaaaatccacaaagtggatccaaccttaaagatttctaacaattgagct 32611913  T
Q  164 cggggtctaaagtttggcgaat 185  Q
    | ||||||||||||||||||||    
T  32611914 c-gggtctaaagtttggcgaat 32611934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 236
Target Start/End: Complemental strand, 17110524 - 17110341
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaacc-----------aaataaagatccacaaagtagatccaaccctatataattcta 152  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||           ||||||| || || ||||| ||| |||||||| | | || ||    
T  17110524 gggggacataaaacctgacccagtcaacaaccctaacggacaaaaccaaaaactaaaaaaataaaaattcaaaaagtggattcaaccctaaacatttgta 17110425  T
Q  153 acaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacg-aattagatcacgtactgtcaactacctgcaaca 236  Q
    |||||||||| |  |||||||  ||| |||||||||||||||||||||||| |||  ||||||||||  |||||| |||||||||    
T  17110424 acaattaagctc-aggtctaattttttgcgaatgaatcgatcgtcaacacgaaatcggatcacgtaccatcaacttcctgcaaca 17110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 29731194 - 29731107
Alignment:
Q  115 aaagatccacaaagtagatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaa 205  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||  | | ||||||||| |||||||||| ||||||||||||||||    
T  29731194 aaagatccacaaa-tggatccaaccctaaacaattctaacaattaagcatgag-tctaaagtt-ggcgaatgaaacgatcgtcaacacgaa 29731107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 6764019 - 6764063
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacgggcaaaa 108  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||    
T  6764019 gggggacataaaatctgacccagtcaacaaccctaacgggcaaaa 6764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 16044757 - 16044686
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaac-caaataaagatccacaaagtagatccaacc 139  Q
    ||||||||| ||||||||| | ||||||||||||||||| |  ||| |||||||||||||||  ||||||||    
T  16044757 acataaaacctgacccagtaagcaaccctaacgggcaaaccataaaaaaagatccacaaagtgaatccaacc 16044686  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 29731266 - 29731222
Alignment:
Q  69 acataaaacttgacccagtcaacaaccctaacgggcaaaaccaaa 113  Q
    ||||||||| |||| |||||||||||||||||||| |||| ||||    
T  29731266 acataaaacctgactcagtcaacaaccctaacgggaaaaatcaaa 29731222  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 20168 - 20271
Alignment:
Q  131 gatccaaccctatataattctaacaattaagcgcggggtctaaagtttggcgaatgaatcgatcgtcaacacgaattag-atcacgtactgtcaactacc 229  Q
    |||||||||||| | || ||||||| |||||||||||  |||||||||||| ||| ||||||||||||||||||| | | |||||||||  |||||| ||    
T  20168 gatccaaccctaaacaaatctaacatttaagcgcgggc-ctaaagtttggcaaataaatcgatcgtcaacacgaaatcgaatcacgtaccatcaactccc 20266  T
Q  230 tgcaa 234  Q
    |||||    
T  20267 tgcaa 20271  T

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Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 15864 - 15903
Alignment:
Q  64 ggggaacataaaacttgacccagtcaacaaccctaacggg 103  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  15864 ggggaacataaaacctgacccagtcaacaaccctaacggg 15903  T

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