View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1160_low_4 (Length: 452)

Name: NF1160_low_4
Description: NF1160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1160_low_4
NF1160_low_4
[»] chr5 (45 HSPs)
chr5 (379-452)||(38816637-38816710)
chr5 (335-440)||(22423764-22423870)
chr5 (335-408)||(3966504-3966577)
chr5 (335-440)||(36838544-36838650)
chr5 (283-408)||(6401447-6401572)
chr5 (335-408)||(18592074-18592147)
chr5 (352-408)||(21814279-21814335)
chr5 (363-440)||(9929649-9929720)
chr5 (354-408)||(37328829-37328883)
chr5 (335-408)||(21542031-21542104)
chr5 (334-391)||(30502390-30502447)
chr5 (334-391)||(30542733-30542790)
chr5 (315-408)||(39698522-39698615)
chr5 (320-408)||(32444752-32444840)
chr5 (347-407)||(41091243-41091303)
chr5 (341-396)||(6471886-6471941)
chr5 (317-408)||(21522733-21522824)
chr5 (317-408)||(21533299-21533390)
chr5 (315-397)||(39205861-39205943)
chr5 (320-401)||(6035469-6035549)
chr5 (393-442)||(8420075-8420124)
chr5 (335-408)||(11685940-11686012)
chr5 (346-391)||(14873529-14873574)
chr5 (317-398)||(15410443-15410524)
chr5 (346-391)||(17925174-17925219)
chr5 (346-391)||(28588676-28588721)
chr5 (352-389)||(39758290-39758327)
chr5 (283-379)||(6770492-6770588)
chr5 (283-439)||(13287354-13287509)
chr5 (320-387)||(5467984-5468051)
chr5 (341-408)||(7677712-7677779)
chr5 (341-391)||(16203797-16203847)
chr5 (346-388)||(18421846-18421888)
chr5 (346-384)||(24273039-24273077)
chr5 (346-384)||(24389137-24389175)
chr5 (412-442)||(24906250-24906280)
chr5 (320-386)||(27144449-27144515)
chr5 (317-387)||(34879333-34879403)
chr5 (321-399)||(38749557-38749635)
chr5 (359-408)||(21351890-21351939)
chr5 (335-404)||(32766932-32767001)
chr5 (337-382)||(35017040-35017085)
chr5 (315-391)||(6247603-6247679)
chr5 (347-387)||(23015995-23016035)
chr5 (327-391)||(23287351-23287415)
[»] chr1 (63 HSPs)
chr1 (346-442)||(44482242-44482343)
chr1 (335-408)||(25361887-25361960)
chr1 (358-440)||(48547938-48548020)
chr1 (321-439)||(10572535-10572661)
chr1 (317-397)||(6427333-6427413)
chr1 (317-408)||(5376485-5376576)
chr1 (333-403)||(10233252-10233323)
chr1 (326-408)||(9828036-9828118)
chr1 (352-406)||(34371731-34371785)
chr1 (346-408)||(47989509-47989571)
chr1 (287-391)||(2896123-2896227)
chr1 (317-379)||(9033021-9033084)
chr1 (341-408)||(21038090-21038157)
chr1 (320-391)||(36878447-36878518)
chr1 (285-400)||(38503271-38503386)
chr1 (339-397)||(7918207-7918265)
chr1 (338-404)||(12713316-12713382)
chr1 (338-404)||(12717407-12717473)
chr1 (346-391)||(1864882-1864927)
chr1 (319-408)||(9629885-9629974)
chr1 (335-408)||(17754312-17754385)
chr1 (319-408)||(36905982-36906071)
chr1 (347-391)||(13997896-13997940)
chr1 (335-391)||(14332644-14332700)
chr1 (317-397)||(20157346-20157426)
chr1 (352-408)||(25934634-25934690)
chr1 (319-391)||(39953148-39953220)
chr1 (320-391)||(13436444-13436515)
chr1 (352-391)||(30749858-30749897)
chr1 (352-391)||(30771309-30771348)
chr1 (341-399)||(1486703-1486761)
chr1 (354-408)||(5944303-5944357)
chr1 (317-391)||(9709803-9709877)
chr1 (321-391)||(29163383-29163453)
chr1 (354-408)||(31694695-31694749)
chr1 (341-391)||(40181878-40181928)
chr1 (319-401)||(40285646-40285728)
chr1 (317-386)||(398772-398841)
chr1 (346-391)||(2784568-2784613)
chr1 (320-397)||(24577182-24577259)
chr1 (308-389)||(34257914-34257995)
chr1 (335-380)||(34298437-34298482)
chr1 (346-391)||(52903261-52903306)
chr1 (360-408)||(6612156-6612204)
chr1 (317-384)||(12443469-12443536)
chr1 (320-387)||(17831537-17831604)
chr1 (346-385)||(25098563-25098602)
chr1 (320-391)||(38075972-38076043)
chr1 (338-404)||(12707862-12707928)
chr1 (353-387)||(17705592-17705626)
chr1 (346-384)||(19324574-19324612)
chr1 (346-396)||(25272494-25272544)
chr1 (341-391)||(27471568-27471618)
chr1 (341-399)||(34712377-34712435)
chr1 (354-391)||(5898268-5898305)
chr1 (346-391)||(23636051-23636096)
chr1 (354-399)||(35919270-35919315)
chr1 (318-391)||(37598816-37598888)
chr1 (326-391)||(43492496-43492561)
chr1 (315-391)||(1815238-1815314)
chr1 (360-404)||(34315738-34315782)
chr1 (352-396)||(45534187-45534231)
chr1 (348-396)||(48148034-48148082)
[»] chr3 (49 HSPs)
chr3 (326-410)||(8039818-8039902)
chr3 (315-391)||(18426930-18427006)
chr3 (320-391)||(40993337-40993409)
chr3 (333-409)||(17005603-17005679)
chr3 (325-383)||(12703998-12704056)
chr3 (326-408)||(14209105-14209187)
chr3 (317-382)||(11493372-11493437)
chr3 (335-391)||(7928451-7928507)
chr3 (346-410)||(16789024-16789088)
chr3 (326-410)||(34910309-34910393)
chr3 (317-380)||(14840304-14840367)
chr3 (320-391)||(35222924-35222995)
chr3 (348-402)||(2731826-2731880)
chr3 (317-391)||(8383240-8383314)
chr3 (346-408)||(16192735-16192797)
chr3 (315-381)||(29112292-29112358)
chr3 (346-391)||(7614417-7614462)
chr3 (346-391)||(8789552-8789597)
chr3 (335-384)||(14618782-14618831)
chr3 (315-380)||(23870572-23870637)
chr3 (315-391)||(45451536-45451610)
chr3 (320-400)||(22774063-22774143)
chr3 (347-391)||(25093515-25093559)
chr3 (317-408)||(14216875-14216966)
chr3 (317-408)||(14223004-14223095)
chr3 (341-408)||(28678310-28678377)
chr3 (361-408)||(29386496-29386543)
chr3 (337-399)||(29508447-29508510)
chr3 (320-387)||(41319316-41319383)
chr3 (404-442)||(4466538-4466576)
chr3 (412-442)||(5440965-5440995)
chr3 (335-389)||(10690266-10690320)
chr3 (404-442)||(13807237-13807275)
chr3 (341-399)||(25948881-25948939)
chr3 (320-406)||(26290357-26290443)
chr3 (341-391)||(38731225-38731275)
chr3 (341-391)||(49505156-49505206)
chr3 (341-398)||(11313795-11313852)
chr3 (346-391)||(20691331-20691376)
chr3 (320-388)||(1514603-1514671)
chr3 (347-391)||(3962795-3962839)
chr3 (335-379)||(8412959-8413003)
chr3 (353-389)||(11507479-11507515)
chr3 (326-374)||(11610513-11610561)
chr3 (404-440)||(27505334-27505370)
chr3 (341-397)||(30994878-30994934)
chr3 (346-386)||(32804547-32804587)
chr3 (335-387)||(34307786-34307838)
chr3 (320-380)||(47362548-47362608)
[»] chr4 (44 HSPs)
chr4 (315-408)||(22234875-22234969)
chr4 (318-385)||(36635308-36635375)
chr4 (317-391)||(7214524-7214597)
chr4 (317-390)||(16189691-16189765)
chr4 (347-408)||(30982863-30982924)
chr4 (320-404)||(35723373-35723458)
chr4 (335-391)||(5775360-5775416)
chr4 (346-398)||(13134462-13134514)
chr4 (329-429)||(21658778-21658878)
chr4 (317-408)||(5414157-5414248)
chr4 (317-408)||(7012049-7012140)
chr4 (354-408)||(19500843-19500897)
chr4 (326-408)||(24613686-24613768)
chr4 (309-391)||(33950111-33950193)
chr4 (317-391)||(40179638-40179712)
chr4 (326-388)||(40613442-40613504)
chr4 (315-399)||(15659754-15659836)
chr4 (335-408)||(40742592-40742665)
chr4 (360-401)||(46160922-46160963)
chr4 (315-403)||(4383349-4383436)
chr4 (335-391)||(8423720-8423776)
chr4 (341-389)||(26504303-26504351)
chr4 (352-404)||(44132633-44132685)
chr4 (335-391)||(54580025-54580081)
chr4 (309-408)||(903897-903996)
chr4 (335-408)||(4099962-4100038)
chr4 (347-389)||(17344513-17344555)
chr4 (346-384)||(22440609-22440647)
chr4 (354-391)||(482240-482277)
chr4 (334-391)||(6933275-6933332)
chr4 (346-391)||(9996852-9996897)
chr4 (315-372)||(11651155-11651212)
chr4 (359-439)||(14126064-14126145)
chr4 (335-376)||(17446072-17446113)
chr4 (346-391)||(18576039-18576084)
chr4 (319-391)||(29205431-29205501)
chr4 (359-408)||(46083976-46084025)
chr4 (360-408)||(5225598-5225646)
chr4 (359-391)||(15029790-15029822)
chr4 (396-440)||(18844423-18844467)
chr4 (354-406)||(19312355-19312407)
chr4 (404-440)||(28470448-28470484)
chr4 (287-391)||(35157987-35158091)
chr4 (329-385)||(55941011-55941067)
[»] chr2 (55 HSPs)
chr2 (317-440)||(21616745-21616864)
chr2 (352-408)||(35056886-35056942)
chr2 (314-440)||(19573959-19574078)
chr2 (335-408)||(44860321-44860394)
chr2 (352-408)||(34784967-34785023)
chr2 (308-390)||(23718000-23718082)
chr2 (308-390)||(24105672-24105754)
chr2 (334-402)||(2665881-2665947)
chr2 (359-408)||(28524451-28524500)
chr2 (339-391)||(5367197-5367249)
chr2 (283-391)||(18276470-18276578)
chr2 (326-410)||(18420417-18420501)
chr2 (319-391)||(20242729-20242801)
chr2 (319-391)||(31018575-31018647)
chr2 (335-391)||(31808078-31808134)
chr2 (337-408)||(17776590-17776661)
chr2 (317-408)||(22084815-22084908)
chr2 (317-405)||(2331777-2331863)
chr2 (335-408)||(4207858-4207930)
chr2 (340-397)||(18622612-18622669)
chr2 (320-396)||(36756341-36756417)
chr2 (326-391)||(39279667-39279732)
chr2 (326-391)||(44605141-44605206)
chr2 (360-400)||(12668416-12668456)
chr2 (352-408)||(18889576-18889632)
chr2 (352-408)||(36096360-36096416)
chr2 (335-387)||(37411250-37411302)
chr2 (347-391)||(38355889-38355933)
chr2 (393-440)||(19536361-19536408)
chr2 (341-408)||(30717515-30717582)
chr2 (352-407)||(32749811-32749866)
chr2 (393-439)||(18255945-18255991)
chr2 (317-391)||(18421946-18422020)
chr2 (362-400)||(22550245-22550283)
chr2 (317-379)||(28412333-28412395)
chr2 (393-439)||(34691770-34691816)
chr2 (341-391)||(34691807-34691857)
chr2 (393-439)||(34714182-34714228)
chr2 (341-391)||(34714219-34714269)
chr2 (354-408)||(37419763-37419817)
chr2 (346-383)||(17520080-17520117)
chr2 (335-408)||(24975310-24975383)
chr2 (335-387)||(4229414-4229466)
chr2 (376-408)||(6045901-6045933)
chr2 (360-408)||(11223848-11223896)
chr2 (368-404)||(18054792-18054828)
chr2 (364-404)||(19614213-19614253)
chr2 (354-402)||(23058433-23058481)
chr2 (336-380)||(25846743-25846787)
chr2 (335-383)||(28677910-28677958)
chr2 (346-398)||(30527590-30527642)
chr2 (346-386)||(35449525-35449565)
chr2 (359-399)||(41843466-41843506)
chr2 (404-440)||(42511322-42511358)
chr2 (335-391)||(42832278-42832334)
[»] chr6 (61 HSPs)
chr6 (318-391)||(7265595-7265668)
chr6 (321-404)||(26562676-26562759)
chr6 (317-391)||(9658862-9658936)
chr6 (315-391)||(13360374-13360450)
chr6 (317-403)||(34073337-34073423)
chr6 (320-440)||(7086781-7086904)
chr6 (341-406)||(9522898-9522963)
chr6 (319-408)||(16766682-16766771)
chr6 (341-397)||(9025490-9025546)
chr6 (317-397)||(9027161-9027241)
chr6 (352-408)||(16488575-16488631)
chr6 (320-440)||(7723199-7723323)
chr6 (320-440)||(8805524-8805645)
chr6 (346-408)||(9617446-9617508)
chr6 (319-397)||(10770670-10770748)
chr6 (317-387)||(13851719-13851789)
chr6 (283-408)||(9107355-9107480)
chr6 (326-391)||(19040344-19040409)
chr6 (365-435)||(34384931-34385003)
chr6 (320-408)||(5970093-5970181)
chr6 (335-391)||(7377980-7378036)
chr6 (352-408)||(18367854-18367910)
chr6 (319-391)||(19044449-19044521)
chr6 (320-388)||(30866149-30866217)
chr6 (335-391)||(32511668-32511724)
chr6 (341-408)||(9195739-9195806)
chr6 (346-408)||(9629395-9629457)
chr6 (346-408)||(10339110-10339173)
chr6 (341-403)||(8931592-8931654)
chr6 (320-410)||(10842518-10842608)
chr6 (354-391)||(7027262-7027299)
chr6 (346-387)||(11591876-11591917)
chr6 (335-408)||(17302348-17302421)
chr6 (319-391)||(5732512-5732584)
chr6 (336-408)||(7248360-7248432)
chr6 (317-380)||(8389485-8389546)
chr6 (283-391)||(8776975-8777083)
chr6 (393-440)||(426478-426525)
chr6 (393-440)||(5732474-5732521)
chr6 (361-408)||(10294134-10294181)
chr6 (346-405)||(14796178-14796237)
chr6 (320-403)||(24833223-24833306)
chr6 (335-440)||(2117077-2117175)
chr6 (333-391)||(7151411-7151469)
chr6 (341-391)||(7996380-7996430)
chr6 (341-391)||(8022371-8022421)
chr6 (354-408)||(8714000-8714054)
chr6 (321-399)||(9024170-9024248)
chr6 (317-391)||(20371112-20371186)
chr6 (341-391)||(21924937-21924987)
chr6 (333-391)||(32298609-32298667)
chr6 (412-442)||(34073276-34073306)
chr6 (317-391)||(34595117-34595191)
chr6 (346-391)||(1700364-1700409)
chr6 (335-388)||(4040467-4040520)
chr6 (354-391)||(6214580-6214617)
chr6 (346-391)||(13364707-13364752)
chr6 (334-391)||(20518345-20518402)
chr6 (363-408)||(28862151-28862196)
chr6 (352-408)||(4388103-4388159)
chr6 (335-391)||(14721242-14721298)
[»] scaffold0008 (1 HSPs)
scaffold0008 (317-408)||(263357-263448)
[»] chr8 (45 HSPs)
chr8 (320-391)||(4786340-4786411)
chr8 (317-387)||(34897068-34897138)
chr8 (315-408)||(15816114-15816207)
chr8 (320-391)||(14134685-14134756)
chr8 (341-440)||(25566848-25566949)
chr8 (315-392)||(12570509-12570586)
chr8 (346-402)||(11803271-11803327)
chr8 (320-391)||(13844598-13844669)
chr8 (328-407)||(14634127-14634206)
chr8 (320-403)||(24362192-24362275)
chr8 (326-408)||(29447095-29447177)
chr8 (341-399)||(34222954-34223012)
chr8 (335-408)||(4611535-4611608)
chr8 (354-403)||(11927076-11927125)
chr8 (346-391)||(33405386-33405431)
chr8 (335-391)||(7658464-7658520)
chr8 (320-392)||(12570735-12570807)
chr8 (320-392)||(18964163-18964235)
chr8 (315-391)||(20679397-20679473)
chr8 (352-408)||(26902160-26902216)
chr8 (317-408)||(22651959-22652050)
chr8 (317-408)||(29510289-29510380)
chr8 (323-390)||(31236580-31236647)
chr8 (320-390)||(39954282-39954352)
chr8 (359-408)||(29447469-29447518)
chr8 (346-391)||(33382021-33382066)
chr8 (359-391)||(8847281-8847313)
chr8 (329-381)||(13203636-13203688)
chr8 (335-399)||(16641968-16642032)
chr8 (341-388)||(27213554-27213601)
chr8 (361-408)||(28384979-28385026)
chr8 (346-393)||(40332203-40332250)
chr8 (317-391)||(926790-926864)
chr8 (341-391)||(3025558-3025608)
chr8 (354-396)||(11944685-11944727)
chr8 (341-391)||(12606831-12606881)
chr8 (346-387)||(31580133-31580174)
chr8 (353-398)||(34451032-34451077)
chr8 (346-387)||(38079011-38079052)
chr8 (315-372)||(41838144-41838201)
chr8 (335-391)||(7472517-7472573)
chr8 (363-391)||(8293854-8293882)
chr8 (341-385)||(14731719-14731763)
chr8 (335-391)||(22493495-22493551)
chr8 (317-385)||(36934653-36934721)
[»] scaffold0123 (1 HSPs)
scaffold0123 (335-408)||(44510-44583)
[»] chr7 (61 HSPs)
chr7 (319-408)||(32308105-32308194)
chr7 (320-408)||(6630897-6630985)
chr7 (346-408)||(26329367-26329429)
chr7 (335-408)||(15902823-15902896)
chr7 (346-391)||(23849460-23849505)
chr7 (341-440)||(7328639-7328743)
chr7 (317-397)||(21140978-21141058)
chr7 (317-397)||(27945024-27945104)
chr7 (347-398)||(22602705-22602756)
chr7 (335-410)||(23128644-23128719)
chr7 (341-408)||(24339649-24339716)
chr7 (320-386)||(22868028-22868094)
chr7 (317-391)||(26733287-26733361)
chr7 (335-404)||(8160417-8160486)
chr7 (355-439)||(49107841-49107923)
chr7 (335-391)||(5835248-5835304)
chr7 (283-391)||(17851380-17851488)
chr7 (335-391)||(20549792-20549848)
chr7 (335-391)||(27093415-27093471)
chr7 (335-391)||(27184830-27184886)
chr7 (346-389)||(27732243-27732286)
chr7 (283-397)||(5235935-5236049)
chr7 (362-408)||(11272571-11272617)
chr7 (335-397)||(18013070-18013132)
chr7 (317-391)||(19206033-19206107)
chr7 (321-391)||(41020483-41020553)
chr7 (346-399)||(5548688-5548741)
chr7 (346-391)||(9482946-9482991)
chr7 (346-387)||(12278847-12278888)
chr7 (346-399)||(16341508-16341561)
chr7 (346-399)||(17307905-17307958)
chr7 (341-410)||(26033444-26033513)
chr7 (359-391)||(640138-640170)
chr7 (335-399)||(7758323-7758387)
chr7 (354-402)||(18039019-18039067)
chr7 (335-410)||(29787354-29787427)
chr7 (352-391)||(18213035-18213074)
chr7 (320-391)||(22484011-22484082)
chr7 (317-408)||(37742506-37742597)
chr7 (352-391)||(39138462-39138501)
chr7 (317-391)||(598191-598265)
chr7 (317-399)||(1433437-1433519)
chr7 (362-408)||(3142063-3142109)
chr7 (341-391)||(3721100-3721150)
chr7 (346-376)||(9232644-9232674)
chr7 (354-440)||(11700823-11700909)
chr7 (341-391)||(19992008-19992058)
chr7 (341-391)||(24146823-24146873)
chr7 (346-387)||(8239056-8239097)
chr7 (335-404)||(11665429-11665498)
chr7 (362-403)||(11744178-11744219)
chr7 (412-441)||(17852091-17852120)
chr7 (354-403)||(21560523-21560572)
chr7 (362-399)||(33384576-33384613)
chr7 (346-390)||(2948695-2948739)
chr7 (360-408)||(4794915-4794963)
chr7 (412-440)||(15680900-15680928)
chr7 (335-391)||(21826274-21826330)
chr7 (315-383)||(23191877-23191945)
chr7 (283-391)||(25481851-25481959)
chr7 (335-391)||(32287465-32287521)
[»] scaffold0044 (1 HSPs)
scaffold0044 (346-410)||(53192-53256)
[»] scaffold0168 (3 HSPs)
scaffold0168 (346-440)||(21055-21149)
scaffold0168 (373-440)||(21211-21278)
scaffold0168 (373-440)||(21340-21407)
[»] scaffold0036 (1 HSPs)
scaffold0036 (338-408)||(9732-9802)
[»] scaffold1528 (1 HSPs)
scaffold1528 (335-408)||(1036-1109)
[»] scaffold0020 (2 HSPs)
scaffold0020 (341-397)||(135308-135364)
scaffold0020 (346-408)||(137792-137854)
[»] scaffold0110 (1 HSPs)
scaffold0110 (346-397)||(28862-28913)
[»] scaffold0039 (1 HSPs)
scaffold0039 (321-404)||(84962-85045)
[»] scaffold0171 (2 HSPs)
scaffold0171 (354-408)||(23531-23585)
scaffold0171 (354-399)||(23440-23485)
[»] scaffold0136 (1 HSPs)
scaffold0136 (346-408)||(3834-3896)
[»] scaffold0223 (1 HSPs)
scaffold0223 (293-440)||(20131-20279)
[»] scaffold0085 (1 HSPs)
scaffold0085 (326-387)||(26385-26446)
[»] scaffold0022 (2 HSPs)
scaffold0022 (320-397)||(99879-99956)
scaffold0022 (320-387)||(90829-90896)
[»] scaffold0623 (1 HSPs)
scaffold0623 (352-404)||(5985-6037)
[»] scaffold0306 (1 HSPs)
scaffold0306 (317-399)||(13383-13466)
[»] scaffold0152 (1 HSPs)
scaffold0152 (317-399)||(21861-21944)
[»] scaffold0004 (1 HSPs)
scaffold0004 (315-378)||(92788-92851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (317-408)||(241577-241668)
[»] scaffold0376 (1 HSPs)
scaffold0376 (361-402)||(6339-6380)
[»] scaffold0450 (1 HSPs)
scaffold0450 (412-440)||(8564-8592)
[»] scaffold0361 (1 HSPs)
scaffold0361 (315-378)||(14510-14574)
[»] scaffold0236 (1 HSPs)
scaffold0236 (352-396)||(25765-25809)
[»] scaffold0027 (1 HSPs)
scaffold0027 (394-442)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 38816710 - 38816637
Alignment:
Q  379 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcgtga 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38816710 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcgtga 38816637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 440
Target Start/End: Complemental strand, 22423870 - 22423764
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc-ggacatggctaattcgaggagtgtccgtgc 433  Q
    |||| ||||| ||||| |||||| ||||||||||| | ||||||||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||    
T  22423870 acactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtctggacacgcctaatccgaggagtgtccgtgc 22423771  T
Q  434 ttcatag 440  Q
    |||||||    
T  22423770 ttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 3966504 - 3966577
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| |||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  3966504 acaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 440
Target Start/End: Original strand, 36838544 - 36838650
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtg-tcggtgtcggacatggctaattcgaggagtgtccgtgc 433  Q
    ||||| |||| ||||| ||||||  |||||||| ||||||||||||||||||||||| ||| | |||||| |||| | ||||| | ||||||||| ||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtttggtgtccgacacgcctaatccaaggagtgtctgtgc 36838643  T
Q  434 ttcatag 440  Q
    |||||||    
T  36838644 ttcatag 36838650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 6401447 - 6401572
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    ||||||||||||||| ||||| |  ||||   | |||||||| |||||| | |||| |||||   ||| |||||| |||| ||| |||||||||||||||    
T  6401447 aagcacggatacagacacggacaccggacgcgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatg 6401546  T
Q  383 tgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||| ||||| ||||||||||    
T  6401547 tgtcggtgtcgtgtcagtgtcggaca 6401572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 18592074 - 18592147
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| | ||||||||||  |||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  18592074 acaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggaca 18592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 21814279 - 21814335
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  21814279 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 21814335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 9929649 - 9929720
Alignment:
Q  363 taattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||||||||||||      ||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929649 taattcagtgtaattatatgtgtcg------tgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 37328883 - 37328829
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 21542031 - 21542104
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| ||||||| || |  ||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  21542031 acacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 21542104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 30502447 - 30502390
Alignment:
Q  334 aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  30502447 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30502390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 30542790 - 30542733
Alignment:
Q  334 aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  30542790 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30542733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 39698522 - 39698615
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||| ||||||   ||||  |||| ||||| | |||| |||||||||||||||||||| | ||||| |||| ||||||||||||||||    
T  39698522 atacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggaca 39698615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 32444752 - 32444840
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| ||||||||||||||| ||| ||||| |||| |  |||||||||| |||||| | |||||||||||| |||||  |||||||||    
T  32444752 gacactgacacgtcaacaccattaacaatttgagaagatgacataattcaatgtaatcaaatgtgtcggtgtcgtgtcaatgtcggaca 32444840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 41091303 - 41091243
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggac 407  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggac 41091243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 6471941 - 6471886
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||| ||||| ||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 21522733 - 21522824
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | ||||  |||| ||||| | ||||  ||||||||||||||||||| |  ||||||||| ||||||||||||||||    
T  21522733 acggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggaca 21522824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 21533299 - 21533390
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | ||||  |||| ||||| | ||||  ||||||||||||||||||| |  ||||||||| ||||||||||||||||    
T  21533299 acggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggaca 21533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 397
Target Start/End: Original strand, 39205861 - 39205943
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| |||||||||||||| ||||  |||| ||||| |||||| || ||||||  |||||||||||||||| ||||| |||||    
T  39205861 atacagacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtc 39205943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 401
Target Start/End: Original strand, 6035469 - 6035549
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtg 401  Q
    ||||| |||||| | ||||| |||| ||||| ||||| | | |||||||||||||||||||| ||||||||| |||||||||    
T  6035469 gacactgacacgccgacaccgctaataatttgagaaata-atataattcagtgtaattatatttgtcggtgtcgtgtcggtg 6035549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 442  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 11685940 - 11686012
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| |||||  | ||||||| ||||||||||||||||||||||| || |||||||||||||    
T  11685940 acaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 14873529 - 14873574
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||    
T  14873529 aatttgagaaaagcacataatttagtgtaattatatgtgtcggtgt 14873574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 15410524 - 15410443
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    |||||||| |||||| | ||||| |||| ||||||||||||  | || |||||||||||| |||||||| ||||| ||||||    
T  15410524 acggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcg 15410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 17925219 - 17925174
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||    
T  17925219 aatttaagaaaatcacataattcaatgtaataatatgtgtcggtgt 17925174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 28588721 - 28588676
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  28588721 aatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 389
Target Start/End: Original strand, 39758290 - 39758327
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    |||||| |||||||||||||||||||||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 379
Target Start/End: Original strand, 6770492 - 6770588
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattat 379  Q
    |||||||||||| |||||||| |  | |||| | |||||||| |||||    |||| ||||| |||||||||||| |||||||||||||||| ||||    
T  6770492 aagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 439
Target Start/End: Complemental strand, 13287509 - 13287354
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||||||||| || ||||| |  |||||  | ||||||||  ||||||| ||||   ||| ||||| | |||| ||||||||||||||||| || | |    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaag 13287410  T
Q  383 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    ||||||||| |||||  ||||||||| | |||||  |||||||||  ||||||||||    
T  13287409 tgtcggtgtcgtgtc-ctgtcggacacgcctaatctgaggagtgtatgtgcttcata 13287354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 5468051 - 5467984
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||||||||| |||  ||| ||||| | |||| |||||||||||||||||||||| ||||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 7677712 - 7677779
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| | |||| |||||||||||||| ||||| | |||||||||| ||||||||||| ||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgaca 7677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 16203847 - 16203797
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| | ||||||| |||||||||||||||||||||||    
T  16203847 ctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 18421888 - 18421846
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  18421888 aatttgagaaaatcacataatccagtgtaattatatgtgtcgg 18421846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Complemental strand, 24273077 - 24273039
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  24273077 aatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Original strand, 24389137 - 24389175
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  24389137 aatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatagtt 442  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 27144449 - 27144515
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    ||||| |||||| | ||||| |||| ||||| || ||| ||||||||| ||||||||||||||||||    
T  27144449 gacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 34879333 - 34879403
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| ||||||||| |  |||| |||| ||||| |||||| || ||||||||||||||| ||||||||||    
T  34879333 acggatacggacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 38749635 - 38749557
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||||||| ||| |||||  ||| ||||| | ||||  |||||||||| ||||||||||||||| ||||| |||||||    
T  38749635 acacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcgg 38749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 21351939 - 21351890
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||||||||||| | ||||||||||  |||||||||| ||||    
T  21351939 cacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgaca 21351890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 32767001 - 32766932
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||| |||| ||||| |||||| | || |||||| |||||||||||||||  |||| ||||||||||||    
T  32767001 acaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcg 32766932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 35017040 - 35017085
Alignment:
Q  337 accactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  35017040 accactaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 6247603 - 6247679
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| |||||| | ||||  |||| ||||| | |||| |||||||||||||||||||| | ||||||||||    
T  6247603 atacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 6247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 23016035 - 23015995
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||| |||||| |||||||||||||||||||||| ||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 23287415 - 23287351
Alignment:
Q  327 acacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||||| ||| |||||| |||||  |||||||||| | |||||||||||||| ||||    
T  23287415 acacgtcgacaccaataataatttaggaaaatgacataattcaatataattatatgtgtcagtgt 23287351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 44482242 - 44482343
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |     |||||| ||||||||||||||||| |||||    
T  44482242 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgtgctccatag 44482341  T
Q  441 tt 442  Q
    ||    
T  44482342 tt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 25361887 - 25361960
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| | ||||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25361887 acaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 440
Target Start/End: Complemental strand, 48548020 - 48547938
Alignment:
Q  358 acacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||| |||||||| | || | ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48548020 acacataattcaatgtaattacaagtattggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 439
Target Start/End: Complemental strand, 10572661 - 10572535
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc--------ggacatggc 412  Q
    |||| |||||| | |||||||||| ||||| |||||| |||||||||| ||||||||| |||||||||||| |||| ||||||        ||||| | |    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgtcaggcacgtggacacgcc 10572562  T
Q  413 taattcgaggagtgtccgtgcttcata 439  Q
    |||||| ||||||||||||||||||||    
T  10572561 taattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 6427333 - 6427413
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||||| |||||| ||||||| |||| ||||| |||||| ||||||||||| ||||||||||||||| ||||| |||||    
T  6427333 acggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 5376576 - 5376485
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||  ||||| | ||||| |||| ||||||||||||  ||||||||||||||||||| | |||||||||| |||||| |||||||||    
T  5376576 acggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggaca 5376485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 403
Target Start/End: Original strand, 10233252 - 10233323
Alignment:
Q  333 caacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg-tggtgtcggtgtc 403  Q
    |||||||||||| || || |||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  10233252 caacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttggtgtcggtgtc 10233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 9828036 - 9828118
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| | |||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagaca 9828118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 34371731 - 34371785
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgga 406  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcgga 34371785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 408
Target Start/End: Original strand, 47989509 - 47989571
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||| |||| |||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  47989509 aatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 47989571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 2896227 - 2896123
Alignment:
Q  287 acggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    ||||||||||  ||||| || ||||| || |||||||| |||||| | ||||| |||| ||||| |||||| ||||||||||||||||  ||||| ||||    
T  2896227 acggatacagtcacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtc 2896128  T
Q  387 ggtgt 391  Q
    |||||    
T  2896127 ggtgt 2896123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 9033084 - 9033021
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaattt-aagaaaaacacataattcagtgtaattat 379  Q
    |||||||| ||||||||||||||||||| ||||| || |||| |||||||||||||||||||||    
T  9033084 acggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 21038090 - 21038157
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||||||||||  ||||||||||||||||| ||||| ||| |||| ||||||||||||||||    
T  21038090 ctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggaca 21038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 36878447 - 36878518
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| | ||||| |||| ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 400
Target Start/End: Original strand, 38503271 - 38503386
Alignment:
Q  285 gcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    |||||||||| || ||||| | ||||||| | ||||||||  ||||  | ||||| |||| ||||| |||||| || ||| |||||||||||||||||||    
T  38503271 gcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T
Q  385 tcggtgtggtgtcggt 400  Q
    |||||||  |||||||    
T  38503371 tcggtgtcctgtcggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 7918265 - 7918207
Alignment:
Q  339 cactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||| |||| |||||    
T  7918265 cactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 12713382 - 12713316
Alignment:
Q  338 ccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||| | |||||  |||||||||||    
T  12713382 ccactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcg 12713316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 12717473 - 12717407
Alignment:
Q  338 ccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||| | |||||  |||||||||||    
T  12717473 ccactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcg 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 1864927 - 1864882
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||    
T  1864927 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 9629974 - 9629885
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||||| || ||||| |||| ||||| | |||| || |||||||||||| |||||| |||||||||| |||||| |||||||||    
T  9629974 ggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggaca 9629885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 17754312 - 17754385
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| | ||||  |||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  17754312 acaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggaca 17754385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 36905982 - 36906071
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||||  ||||||| |||| ||| | |||||| |||||||||||| |||||||||||||| || || ||||| ||||||||||    
T  36905982 ggacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggaca 36906071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 13997896 - 13997940
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||| |||||||||||||||||||||||||||||||||    
T  13997896 atttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 14332700 - 14332644
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||| ||||| |||||| ||||||||| ||||||||||||||| |||||||    
T  14332700 acaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgt 14332644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 20157426 - 20157346
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| ||| ||||| || ||||| |||| ||| | |||||| |||||||||||||||||| |||||||||||||| |||||    
T  20157426 acgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 25934634 - 25934690
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||| ||| |||||||||||||||||||||| | ||||||||||||||||    
T  25934634 agaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggaca 25934690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 39953220 - 39953148
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||| ||| | ||||| |||| ||||| |||||| ||||||||| ||||||||| |||||||||||||    
T  39953220 ggacacggaaacgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgt 39953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 13436444 - 13436515
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||||| | ||||  |||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  13436444 gacacgaacacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgt 13436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 30749858 - 30749897
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgt 30749897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 30771309 - 30771348
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgt 30771348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 1486761 - 1486703
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| ||||| | |||| |||||||||||||||||||||| |||||||||| |||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 5944303 - 5944357
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||||||||||||||||||||| |||||||||| |||||| || ||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggaca 5944357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 9709803 - 9709877
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||| | | ||||| |||| ||||| |||||| ||||||||||  |||||||||||||||||||||    
T  9709803 acggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgt 9709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 29163453 - 29163383
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||| | ||||| |||| |||||| ||||| ||||||||||| | |||||||||||||||||||    
T  29163453 acacagacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgt 29163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 31694749 - 31694695
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||||||||||| |||||| | |||||||||| ||||||||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggaca 31694695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 40181878 - 40181928
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| ||||||||||||||||||||||||| |||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgt 40181928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 40285728 - 40285646
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtg 401  Q
    |||||| |||||  ||||||| |||| ||||| |||||| | |||||||||||||| | |||||||||| ||| |||||||||    
T  40285728 ggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcggtg 40285646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 398841 - 398772
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    |||||||| |||||| | ||||| |||| ||||| | |||| |||||||||||||||||||||| |||||    
T  398841 acggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 2784568 - 2784613
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||    
T  2784568 aatttaagaaaatcacataattgagtataattatatgtgtcggtgt 2784613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 24577259 - 24577182
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    ||||||||||||   |||| ||||| ||||| | |||| |||||||||||||||||||| | |||||||||| |||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 34257995 - 34257914
Alignment:
Q  308 ggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    |||||| ||||||| |  |||||||| |||||  ||| ||||||| |||| ||||||||| ||||||||||||| |||||||    
T  34257995 ggacatgatacggatattgacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattatatatgtcggt 34257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 34298437 - 34298482
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  34298437 acaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 52903261 - 52903306
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||    
T  52903261 aatttaataaaatcatataattcagtgtaattatatgtgtcggtgt 52903306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 6612204 - 6612156
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||||| | |||||||||| |||||| |||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggaca 6612156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 12443536 - 12443469
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| ||||||||| | ||||  |||| ||||| |||||| ||||||||||||||||||| ||||||    
T  12443536 acggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 17831604 - 17831537
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||||| | ||||| |||| ||||| |||||| ||||| |||||||||||| ||||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 25098602 - 25098563
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgt 385  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  25098602 aatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 38076043 - 38075972
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||| | ||||  |||| ||||| || ||| ||||||| |||||||||| ||||||||||||||    
T  38076043 gacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgt 38075972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 12707928 - 12707862
Alignment:
Q  338 ccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||| |||||||||||| || |||||| |||| |||||||||| | |||||  |||||||||||    
T  12707928 ccactaataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcg 12707862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 387
Target Start/End: Complemental strand, 17705626 - 17705592
Alignment:
Q  353 gaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||||||||||||||||||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtcg 17705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Original strand, 19324574 - 19324612
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  19324574 aatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 396
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    ||||| |||||| ||||||||| |||||||||||| |||||||||| ||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 27471618 - 27471568
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| |||||||||||||||||||| |||||| |||||    
T  27471618 ctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgt 27471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 34712435 - 34712377
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| ||||| ||||||  |||||||| |||||||||||||||||| |||| |||||||    
T  34712435 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcgg 34712377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Complemental strand, 5898305 - 5898268
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgt 5898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 23636096 - 23636051
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| ||||||  |||||||||||||||||| |||||||||||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcggtgt 23636051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 35919315 - 35919270
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| |||||||||||||||||||||| ||||| |||| |||||||    
T  35919315 aaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcgg 35919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 37598816 - 37598888
Alignment:
Q  318 cggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||||| | |||| ||||| ||||| | |||| |||| ||||||||||||||||| ||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgt 37598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 43492561 - 43492496
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| | |||||||||  ||||| |||||| ||| |||||| |||||||||| |||||||||||    
T  43492561 gacacgccgacaccactagtaatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgt 43492496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 1815238 - 1815314
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||| |||||| | |||| | |||  |||| | |||| |||||||||||||||||||| | ||||||||||    
T  1815238 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgt 1815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 34315738 - 34315782
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||||| |||||||||||||||||||| | || |||||||||    
T  34315738 acataattcggtgtaattatatgtgtcggtatcgtatcggtgtcg 34315782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 45534231 - 45534187
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    |||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  45534231 agaaaatcacataatttagtgtaagtatatatgtcggtgtggtgt 45534187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 48148082 - 48148034
Alignment:
Q  348 tttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    ||||| |||| || |||||||||||||||||||| ||||||||| ||||    
T  48148082 tttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 8039902 - 8039818
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||||| ||||||| |||| ||||| ||||||  | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8039902 gacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 18426930 - 18427006
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||||||||| | |||||||||| ||||| | |||| |||||||||| |||||||||||| |||||||||    
T  18426930 atacggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgt 18427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 40993409 - 40993337
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaa-cacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||| || ||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  40993409 gacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 40993337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 17005679 - 17005603
Alignment:
Q  333 caacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacat 409  Q
    |||||||||||| ||||| | |||| || ||||||||||||||||||| |||||||||| |||| |||||| |||||    
T  17005679 caacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacat 17005603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 12703998 - 12704056
Alignment:
Q  325 ggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgt 383  Q
    ||||||| | |||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  12703998 ggacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 14209105 - 14209187
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| | |||| ||||| ||||| | |||| |||||||||||||||||||| | ||||| |||| ||||||||||||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggaca 14209187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 11493437 - 11493372
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||||  |||||||| |||||||||| ||| | |||||| ||||||||||||||||||||||||    
T  11493437 acggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 7928451 - 7928507
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||| | |||| |||||||||||||||||||||||||||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 16789024 - 16789088
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    ||||||| |||| || ||||||||||||||||||| |||| ||||| ||||| ||||||||||||    
T  16789024 aatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatg 16789088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 410
Target Start/End: Original strand, 34910309 - 34910393
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||||| | |||| ||||| ||||| | |||| |||||||||||||||||||| | | |||||||| || |||||||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatg 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 14840367 - 14840304
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    ||||| || |||||| |||||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  14840367 acggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 35222924 - 35222995
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| | |||| ||||| | ||| |||||| ||||||||||| |||||||||||||||||||||    
T  35222924 gacacagacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgt 35222995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 402
Target Start/End: Original strand, 2731826 - 2731880
Alignment:
Q  348 tttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    |||||||||| ||||||||| |||||||||||||||||  |||| ||||||||||    
T  2731826 tttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcggtgt 2731880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 8383240 - 8383314
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||  |||||| | ||||| |||| ||||| |||||| || ||||||||||||||||||| ||||||||||    
T  8383240 acggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 16192797 - 16192735
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| ||||||  |||||||||||||||||||||||||| | ||| ||||||||||| ||||    
T  16192797 aatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagaca 16192735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 29112358 - 29112292
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatat 381  Q
    |||||||||| |||||||  ||||||||||  |||| |||||| || ||||||||||||||||||||    
T  29112358 atacggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 7614462 - 7614417
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||    
T  7614462 aatttaagaaaatcacataattcagtataattatatatgtcggtgt 7614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 8789597 - 8789552
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  8789597 aatttgagaaaatcacataattccgtgtaattatatgtgtcggtgt 8789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 14618782 - 14618831
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| |||| |||||||||||| |||||||||||||||||| |||||||    
T  14618782 acacccctaataatttaagaaaaccacataattcagtgtaataatatgtg 14618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 380
Target Start/End: Complemental strand, 23870637 - 23870572
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    ||||||||||||||||||| ||||| |||| ||||| | |||| || |||||||||||| ||||||    
T  23870637 atacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 45451536 - 45451610
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||  |||||  |||| ||||| |||||| |||||| |||||| |||| ||||||||||||||    
T  45451536 atacggacacggacacg--aacactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgt 45451610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 400
Target Start/End: Complemental strand, 22774143 - 22774063
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggt 400  Q
    ||||| |||||||| |||||||||| ||||  | |||  |||||| ||||||||||||||| ||||||||||  |||||||    
T  22774143 gacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtcatgtcggt 22774063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 25093515 - 25093559
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||| |||| ||||||||||||||||||||||||||||    
T  25093515 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 14216875 - 14216966
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||||| |||| ||||| ||||| | || | || ||||||||||||||||| | ||||| |||| ||||  ||||||||||    
T  14216875 acggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggaca 14216966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 14223004 - 14223095
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||||| |||| ||||| ||||| | || | || ||||||||||||||||| | ||||| |||| ||||  ||||||||||    
T  14223004 acggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggaca 14223095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 28678310 - 28678377
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||||| |||| ||||||||| ||| ||||| ||||||||||||| |||| |||||| ||||    
T  28678310 ctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgttggtgtcagaca 28678377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 29386543 - 29386496
Alignment:
Q  361 cataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||||||| |||||||||||||| |||| ||| |||||||    
T  29386543 cataattcagtgtaatcatatgtgtcggtgtcgtgtaggtatcggaca 29386496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 29508447 - 29508510
Alignment:
Q  337 accactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg-tggtgtcgg 399  Q
    |||||||| ||||| | |||| || |||||||||||||||||||||||||| || |||||||||    
T  29508447 accactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcgg 29508510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 41319383 - 41319316
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||||||||| |||||| ||| ||||| | ||||  |||||||||| ||||||| |||||||||    
T  41319383 gacacggacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaattgtatgtgtcg 41319316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  404 ggacatggctaattcgaggagtgtccgtgcttcatagtt 442  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatagtt 442  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 10690320 - 10690266
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    ||||| |||| ||| | |||||| ||||||||||||||||||||||| |||||||    
T  10690320 acaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  404 ggacatggctaattcgaggagtgtccgtgcttcatagtt 442  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 25948939 - 25948881
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| ||||| | |||| |||||||||||||||||||||| |||| ||||| |||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcgg 25948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 406
Target Start/End: Original strand, 26290357 - 26290443
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgga 406  Q
    ||||| |||||| | |||||| ||| ||||| |||||| |||||| ||| || |||||||||||||| |||| ||  ||||||||||    
T  26290357 gacactgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttccggtgtcgga 26290443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 38731225 - 38731275
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| | |||| |||||||||||||||| ||||||||||||||||    
T  38731225 ctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgt 38731275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 49505206 - 49505156
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgt 49505156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 11313852 - 11313795
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    |||| ||||| |||||| ||||||||| |||||||||||||||||  |||| ||||||    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 20691331 - 20691376
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| ||||||  ||||||||||||||||| ||||||||||||||    
T  20691331 aatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 1514603 - 1514671
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    |||||||||||| | ||||| |||| ||||| | | |||| ||||||| |||||||||||| |||||||    
T  1514603 gacacggacacgccgacaccgctaataatttgaaagaaacgcataatttagtgtaattataagtgtcgg 1514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 3962839 - 3962795
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||  |||||| ||||||| |||||||||||||||||    
T  3962839 atttaagaaaataacataactcagtgttattatatgtgtcggtgt 3962795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 8413003 - 8412959
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattat 379  Q
    |||| ||||| ||||| |||||||||||||||||||| |||||||    
T  8413003 acacaactaataatttgagaaaaacacataattcagtttaattat 8412959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 389
Target Start/End: Complemental strand, 11507515 - 11507479
Alignment:
Q  353 gaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggt 11507479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 11610513 - 11610561
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgta 374  Q
    |||||| ||||||| |||| ||||||| |||| ||||||||||||||||    
T  11610513 gacacgccaacaccgctaataatttaaaaaaatcacataattcagtgta 11610561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  404 ggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 30994934 - 30994878
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| |||||||||||| |||| ||||||||||||||||| || || |||| |||||    
T  30994934 ctaataatttaagaaaatcacacaattcagtgtaattatacgtatcagtgttgtgtc 30994878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 32804587 - 32804547
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  32804587 aatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 34307838 - 34307786
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||| ||||| |||||| |||||| ||||||||||||||| ||||||    
T  34307838 acaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 47362548 - 47362608
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    ||||| |||||||||||| || ||| ||||||||||||  |||||||| | ||||||||||    
T  47362548 gacaccgacacgtcaacatcagtaataatttaagaaaattacataattgaatgtaattata 47362608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 22234969 - 22234875
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaa-cacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||| | ||||| |||| ||||| | ||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  22234969 atacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgaca 22234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 36635308 - 36635375
Alignment:
Q  318 cggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgt 385  Q
    ||||||| |||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 7214597 - 7214524
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||||||| ||||||||||||| ||||| |||||| ||||||||| | |||||||||||| ||||||||    
T  7214597 acgggcacggacac-tcaacaccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt 7214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 16189691 - 16189765
Alignment:
Q  317 acggacacggacacgtc-aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    ||||| ||||||||| | |||||| |||| ||||| |||||| ||||||||||||||||||||| ||||||||||    
T  16189691 acggatacggacacggccaacaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 30982924 - 30982863
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||||| |||||| ||||||||||||||| |||||||||| ||||||||||| ||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 404
Target Start/End: Complemental strand, 35723458 - 35723373
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaa-acacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||| |||||| | ||||| |||| ||||| |||||| |||||||||||| |||||||||||||||| |||| || |||||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgtatcggtgtcg 35723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 5775416 - 5775360
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||| ||||| |||||| ||||||||| |||||||||||||||||||||||    
T  5775416 acaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 13134462 - 13134514
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  13134462 aatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtcg 13134514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 429
Target Start/End: Complemental strand, 21658878 - 21658778
Alignment:
Q  329 acgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtc 428  Q
    |||| ||||||||||| ||||| |||||| ||||||||| | | ||||| || |||||||| |  |||| |||||||||| | ||||| |||||||||||    
T  21658878 acgttaacaccactaataatttgagaaaatcacataatttactataattttaagtgtcggtttcatgtcagtgtcggacacgtctaatccgaggagtgtc 21658779  T
Q  429 c 429  Q
    |    
T  21658778 c 21658778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 5414248 - 5414157
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||| | ||||  ||||   ||| |||||| |||| ||| |||||||||||||||| ||||||| ||||| ||||||||||    
T  5414248 acggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggaca 5414157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 7012049 - 7012140
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | |||||  ||| ||||| ||||||  |||||||||||||| || ||| || ||||||| ||||||||||||||||    
T  7012049 acggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggaca 7012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 19500897 - 19500843
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||| || ||||||||||||||||  ||||| ||||||||||||||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggaca 19500843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 24613768 - 24613686
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||| ||||| ||||| |||||| ||||||||||| ||||| || | ||||||||||  |||||||||| ||||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagaca 24613686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 33950111 - 33950193
Alignment:
Q  309 gacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| ||| |||| ||||| ||||| || |||| ||||| |||||| ||||||||| | |||||| ||||||||||||||    
T  33950111 gacataacacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 40179712 - 40179638
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||||||  |||||| ||| | ||| | |||| |||||||||||||||||||||||| ||||||||    
T  40179712 acggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 40179638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    |||||| | ||||| |||| | ||| |||||| ||||||||||||||||||||||||||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 15659836 - 15659754
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||||||||| ||||  ||||||  |||| ||||| |||||| | |||||||| |||||||||||||||| ||||| |||||||    
T  15659836 atacggacacgaacac--caacactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcgg 15659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 40742592 - 40742665
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||| ||||| |||||| || |||||  ||||||||||||||||||| ||| ||||||||||| ||||    
T  40742592 acaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagaca 40742665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 46160922 - 46160963
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtg 401  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  46160922 acataattcagtgttattatatgtgtcggtgtcgtgtcggtg 46160963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 403
Target Start/End: Original strand, 4383349 - 4383436
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    |||||||||| |||||||| | || ||||| ||||| | |||| |||||||||||||||||||| |  |||| |||| |||||||||||    
T  4383349 atacggacactgacacgtcgatacaactaataatttga-aaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtc 4383436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 8423776 - 8423720
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||| |||||| ||||||||||||||||||||||  |||||||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 26504351 - 26504303
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    |||| |||||||||||| || ||| ||||||||||||||||||||||||    
T  26504351 ctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 44132685 - 44132633
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    |||||| ||| ||||||||| ||||||||||||||||||| |||| |||||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcg 44132633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 54580081 - 54580025
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| ||||| | |||| |||||||||||||||||||||| ||||||||||    
T  54580081 acacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 903897 - 903996
Alignment:
Q  309 gacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||| |||||||| |||||  |  ||||  ||| ||||| |||||| ||||||||||||||||||||||||| || || | || ||||||| |||||    
T  903897 gacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggaca 903996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 4099962 - 4100038
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaat---tatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||| ||||| ||| || ||||||||| ||||||||   ||||||||||||||| ||||| ||||||||||    
T  4099962 acaccattaaaaatttgagacaatcacataatttagtgtaataattatatgtgtcggtgtcgtgtctgtgtcggaca 4100038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 389
Target Start/End: Original strand, 17344513 - 17344555
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    ||||||||||| ||||||||| | |||||||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtgtcggt 17344555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Complemental strand, 22440647 - 22440609
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtg 384  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  22440647 aatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Complemental strand, 482277 - 482240
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||||||||||||  |||||||||    
T  482277 aaaaacacataattcagtgtaattataactgtcggtgt 482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 6933275 - 6933332
Alignment:
Q  334 aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||| ||| |||||||| | ||||||||||| |||| ||||||||| ||||    
T  6933275 aacaccactaataatgtaagaaaatctcataattcagtttaatcatatgtgtcagtgt 6933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 9996852 - 9996897
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| ||||||||||||| ||||||||||| |||||||    
T  9996852 aatttgagaaaatcacataattcagtataattatatgtctcggtgt 9996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 11651212 - 11651155
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtg 372  Q
    |||||||||| |||||||| ||||  |||| ||||||| |||| ||||||||||||||    
T  11651212 atacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 14126145 - 14126064
Alignment:
Q  359 cacataattcagtgtaattatatgtgtc-ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    |||||||||||||||||||||| |||||  || | ||||| |||||||||| | ||||| ||| ||||||  ||||||||||    
T  14126145 cacataattcagtgtaattataagtgtcatgtctcgtgtccgtgtcggacacgcctaatccgaagagtgtatgtgcttcata 14126064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 17446072 - 17446113
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaat 376  Q
    |||||||||| |||||||||||| ||||||||| ||||||||    
T  17446072 acaccactaataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 18576084 - 18576039
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| |||||||||| |||||||||||||||| |||||    
T  18576084 aatttgagaaaatcacataattcggtgtaattatatgtgttggtgt 18576039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 29205431 - 29205501
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||||  ||||||  |||| ||||| | |||| |||||||||||||||||||| | ||||||||||    
T  29205431 ggacacggacac--caacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 46084025 - 46083976
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||  ||||||||||||||||||||||| ||||| || |||||||    
T  46084025 cacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggaca 46083976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 5225646 - 5225598
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||| || ||| |||||||||||||| |||| |||||||||||    
T  5225646 acataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggaca 5225598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 15029790 - 15029822
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||||||||||||||||||| |||||    
T  15029790 cacataattcagtgtaattatatgtgttggtgt 15029822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  396 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 19312355 - 19312407
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgga 406  Q
    |||| ||||| |||||||||||||||| || ||||||| |||||| |||||||    
T  19312355 aaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcgga 19312407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  404 ggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 35158091 - 35157987
Alignment:
Q  287 acggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    |||||||| || ||||| |  ||||| || |||||||| |||||| | || | ||||| |||||   |||| ||||||||| |||||||||||| |||||    
T  35158091 acggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtc 35157992  T
Q  387 ggtgt 391  Q
    |||||    
T  35157991 ggtgt 35157987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 55941067 - 55941011
Alignment:
Q  329 acgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgt 385  Q
    |||||||||||| ||| ||||||||||||  |||||||| ||| |||| ||||||||    
T  55941067 acgtcaacaccaataataatttaagaaaattacataatttagtataatcatatgtgt 55941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 440
Target Start/End: Original strand, 21616745 - 21616864
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaat 416  Q
    ||||||||||||||| | ||||| |||| ||||| |||||| |||||||||||||||||||||||||||  ||||     ||||| |||||| |||||||    
T  21616745 acggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtacgtgt----ccggtgccggacacggctaat 21616840  T
Q  417 tcgaggagtgtccgtgcttcatag 440  Q
     | || ||||||||||||||||||    
T  21616841 ccaagaagtgtccgtgcttcatag 21616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 35056886 - 35056942
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 35056942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 314 - 440
Target Start/End: Original strand, 19573959 - 19574078
Alignment:
Q  314 aatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggct 413  Q
    |||||||||||| ||||| | |||||  ||| ||||||||||||  ||||||||||||||||||||| ||| ||      |||||||||||||||   ||    
T  19573959 aatacggacacg-acacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtggcg------tgtcggtgtcggacacacct 19574051  T
Q  414 aattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||| ||||||||||    
T  19574052 aattcgaggagtgtccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 44860321 - 44860394
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| |||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 34785023 - 34784967
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggaca 34784967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 23718000 - 23718082
Alignment:
Q  308 ggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    |||||| | |||||||| |||||  | ||||| |||| ||||| |||||  ||||||||||||||||||||||||||||||||    
T  23718000 ggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 24105672 - 24105754
Alignment:
Q  308 ggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    |||||| | |||||||| |||||  | ||||| |||| ||||| |||||  ||||||||||||||||||||||||||||||||    
T  24105672 ggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 2665947 - 2665881
Alignment:
Q  334 aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||||||||  ||||| ||||||||||    
T  2665947 aacaccactaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgt 2665881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 28524451 - 28524500
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  28524451 cacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggaca 28524500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 5367197 - 5367249
Alignment:
Q  339 cactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||||| || ||| |||||||||||||||||||||||||||||||||    
T  5367197 cactaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 18276470 - 18276578
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    ||||||||||||||| ||||| |  |||||  |||| ||||| || | | | ||||| |||| ||||| |||||| ||| ||||||||||||||||| ||    
T  18276470 aagcacggatacagacacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtg 18276569  T
Q  383 tgtcggtgt 391  Q
    |||||||||    
T  18276570 tgtcggtgt 18276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 18420501 - 18420417
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||||| ||||||  |||| ||||| |||||| ||||||||||| || ||||||| |||||||||| |||||  |||||||||||    
T  18420501 gacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 20242801 - 20242729
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||| | |||| |||||   ||| |||||| |||||||||||||||||||||||||||||||||    
T  20242801 ggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgt 20242729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 31018575 - 31018647
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||| ||||||| |||| ||||| |||||| ||||| ||| |||||||||||| ||||||||||    
T  31018575 ggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgt 31018647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 31808078 - 31808134
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||||| |||| |||||||||||||||||||||||||||| ||||    
T  31808078 acaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 17776590 - 17776661
Alignment:
Q  337 accactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||| |||||||||||| ||||||| |||||||||||||||||||| ||||   |||||||| |||||    
T  17776590 accaataataatttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggaca 17776661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 22084908 - 22084815
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaa--ttatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||||||| ||||||||  ||| ||||| |||||| || ||||||||||||||  ||||||||| |||| | ||||| ||||||||||    
T  22084908 acggatacggacacatcaacaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggaca 22084815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 2331777 - 2331863
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgg 405  Q
    |||||||  ||||||  ||||||| ||| ||||| |||||| ||||||||||||||||  | ||||||||||||| ||||| |||||||    
T  2331777 acggacattgacacgcaaacaccattaataatttgagaaaatcacataattcagtgta--tttatgtgtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 4207858 - 4207930
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||| ||||| | |||| | ||||||| ||||||||||||| ||||||| | ||||||||||||||||    
T  4207858 acaccactaataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggaca 4207930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 18622612 - 18622669
Alignment:
Q  340 actaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    ||||| ||||||| |||| |||||||||||||||||||||| |||| ||||| |||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 36756417 - 36756341
Alignment:
Q  320 gacacggacacgtcaacaccactaagaattt-aagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    ||||| |||||||| |||| ||||| ||||| |||||| | ||||||||||||||||||||| |||||||||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaata-acataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 39279667 - 39279732
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||||  ||| ||| | |||||| || ||||||||||||||||||||||||||||||    
T  39279667 gacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 44605206 - 44605141
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||| ||| ||| ||||| ||||||  |||||||||| |||||||| ||||||||||||    
T  44605206 gacacgtcaacgccaataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 12668456 - 12668416
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggt 400  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  12668456 acataattcagtgtaattataagtgtcggtgtcgtgtcggt 12668416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 18889632 - 18889576
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||||||||||||||||| ||||||||||||||  |||  ||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggaca 18889576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 36096416 - 36096360
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||| ||| |||||||||||||| ||||||||| |||||| |||||||||    
T  36096416 agaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggaca 36096360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 37411302 - 37411250
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||| ||||| |||||| ||||||||||||||| |||||||||||||    
T  37411302 acaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 38355933 - 38355889
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 30717582 - 30717515
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| | |||| |||||||||||||||||||| | |||||| ||| |||||| |||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggaca 30717515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 32749866 - 32749811
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggac 407  Q
    |||||| |||||||||||||||||| ||| ||||| |||| |||||| ||||||||    
T  32749866 agaaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggac 32749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 18421946 - 18422020
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||||| | |||| | ||| ||||||| || | |||||||||||||||||||| | ||||||||||    
T  18421946 acggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgt 18422020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 400
Target Start/End: Complemental strand, 22550283 - 22550245
Alignment:
Q  362 ataattcagtgtaattatatgtgtcggtgtggtgtcggt 400  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  22550283 ataattcagtgtaattatatgtgtcagtgttgtgtcggt 22550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 28412333 - 28412395
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattat 379  Q
    ||||||||  |||||||||||||  ||| ||||| | |||| |||||||||||||||||||||    
T  28412333 acggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 34691857 - 34691807
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| | |||| || ||||||||||||||||||||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 34714269 - 34714219
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| | |||| || ||||||||||||||||||||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 37419763 - 37419817
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||| ||||||||||||||| | ||| |||||| ||||||||||||||||    
T  37419763 aaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggaca 37419817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 383
Target Start/End: Complemental strand, 17520117 - 17520080
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgt 383  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  17520117 aatttaagaaaatcacataattcagtgtaatcatatgt 17520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 24975383 - 24975310
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| |||||| |  |||||||||||||| |||||| |||||||| ||||| ||||| ||||    
T  24975383 acaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagaca 24975310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 4229466 - 4229414
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||| ||| ||||||||| ||  ||||||||||||||||| ||||||||||    
T  4229466 acaccaataataatttaagagaatgacataattcagtgtaatcatatgtgtcg 4229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 408
Target Start/End: Complemental strand, 6045933 - 6045901
Alignment:
Q  376 ttatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||||||| |||||||||||    
T  6045933 ttatatgtgtcggtgtggtgttggtgtcggaca 6045901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 11223896 - 11223848
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||||| | ||||||||||  ||| |||||||||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggaca 11223848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 18054828 - 18054792
Alignment:
Q  368 cagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18054828 cagtgtaattatatgtgttggtgtcgtgtcggtgtcg 18054792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 19614213 - 19614253
Alignment:
Q  364 aattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||||||||||||||||||| || | ||||||||||||    
T  19614213 aattcagtgtaattatatgtgtcagtatcgtgtcggtgtcg 19614253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 23058481 - 23058433
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    |||| |||||||| ||||||||||| | |||||||||| ||||||||||    
T  23058481 aaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt 23058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 25846743 - 25846787
Alignment:
Q  336 caccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    ||||||||| ||||| |||||| ||||| ||||||||||||||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 28677910 - 28677958
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgt 383  Q
    ||||| |||| ||||| | |||| |||||||||||||||||||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 30527642 - 30527590
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    ||||| |||||| || |||||| ||||||||||||||||||||| | ||||||    
T  30527642 aatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcg 30527590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 35449525 - 35449565
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  35449525 aatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 41843466 - 41843506
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||||||||| || ||||||||||||||||||| |||||||    
T  41843466 cacataattcggtataattatatgtgtcggtgttgtgtcgg 41843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  404 ggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 42832334 - 42832278
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||| ||||||  ||||| ||||||||||||||| ||||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 7265668 - 7265595
Alignment:
Q  318 cggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||||| ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 404
Target Start/End: Original strand, 26562676 - 26562759
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||||||| | ||||  |||| ||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  26562676 acacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 9658862 - 9658936
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||||| | ||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  9658862 acggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 13360450 - 13360374
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| |||||||| |||||||||  ||||| |||||| ||||||||||||||||||||||||| |||||||    
T  13360450 atacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgt 13360374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 403
Target Start/End: Complemental strand, 34073423 - 34073337
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    |||||||| |||| | ||||| | |||| ||||| |||||| | |||||||||||||||||||||| |||||||| |||||||||||    
T  34073423 acggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 440
Target Start/End: Original strand, 7086781 - 7086904
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg---tgtcggacatggctaat 416  Q
    ||||| ||||||||  |||  |||| ||||| |||||| ||||||||| ||||||||||||||||||||||| ||||| |    ||  |||||| |||||    
T  7086781 gacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacgtgagacatgcctaat 7086880  T
Q  417 tcgaggagtgtccgtgcttcatag 440  Q
     |||||||| ||||||||||||||    
T  7086881 ccgaggagtttccgtgcttcatag 7086904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 9522898 - 9522963
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgga 406  Q
    |||| ||||||| |||| |||||||||||||||||||| | |||||||||| ||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcgga 9522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 16766682 - 16766771
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||||| | ||||  |||| ||||| | |||| |||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 9025546 - 9025490
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 9027161 - 9027241
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||||| |||||| | ||||| |||| ||||| ||| || |||||||||| |||||||||||||||||||||| |||||    
T  9027161 acggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 16488631 - 16488575
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  16488631 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 16488575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 7723323 - 7723199
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt--cgg--acatggctaa 415  Q
    ||||| |||||||  ||||  |||| ||||| |||||| || |||||||||  ||||||||||| ||||||| ||||||||||  |||  ||| | ||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattatatgtatcggtgtcgtgtcggtgttacggaaacacgcctaa 7723224  T
Q  416 ttcgaggagtgtccgtgcttcatag 440  Q
    | |||||||||||||||||||||||    
T  7723223 tccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 8805645 - 8805524
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggt---gtcggacatggctaat 416  Q
    ||||| ||||||||  |||  |||| ||||| |||||| ||||||||| |||||||||||  |||||||||| ||||| |    || ||||||| |||||    
T  8805645 gacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat--gtgtcggtgtagtgtcagacacgtgggacatgcctaat 8805548  T
Q  417 tcgaggagtgtccgtgcttcatag 440  Q
     |||||||||||||||||||||||    
T  8805547 ccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 408
Target Start/End: Original strand, 9617446 - 9617508
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||| ||  ||||||||||||    
T  9617446 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggaca 9617508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 10770748 - 10770670
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||| |||||| |||||| ||||| ||||| | |||| |||||||||||||||||||| | |||||||||| |||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 13851719 - 13851789
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||| |||||||| ||||| |||| ||||| ||||||  || |||||||||||||||||||||||||    
T  13851719 acggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 408
Target Start/End: Complemental strand, 9107480 - 9107355
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||||||||| || ||||| |  |||||  | ||||||||  ||||| | ||||  |||| ||||| | |||| |||| ||||||||||||||| | |    
T  9107480 aagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaag 9107381  T
Q  383 tgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||| ||||||||||||||||    
T  9107380 tgtcggtgtcgtgtcggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 19040344 - 19040409
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| | ||||| |||| ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgt 19040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 34385003 - 34384931
Alignment:
Q  365 attcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca--tggctaattcgaggagtgtccgtgctt 435  Q
    ||||||||||||||||||||||||| | |||| |||||| ||||  || ||||| ||||||||||||||||||    
T  34385003 attcagtgtaattatatgtgtcggtttcgtgttggtgtcagacacgtgtctaatccgaggagtgtccgtgctt 34384931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 5970181 - 5970093
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||||| ||||   ||| ||||| | |||| |||||||||||||||||||| |  ||| ||||| ||||||||||||||||    
T  5970181 gacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggaca 5970093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 7377980 - 7378036
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||| |||||| ||||||||||| |||||||||||||||||||||    
T  7377980 acaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 18367854 - 18367910
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||||||| ||||    
T  18367854 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagaca 18367910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 19044449 - 19044521
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||| | |||| ||||| ||||| |||| | ||||||||||||||| |||||||||||||||||    
T  19044449 ggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgt 19044521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 30866217 - 30866149
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    ||||| |||||  ||||||| |||| ||||| |||||| ||||||||||| ||||||||||||||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 32511724 - 32511668
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||| |||| |||||    
T  32511724 acaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgt 32511668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 9195806 - 9195739
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| ||||||  |||||||| ||||||||||||||||||||||| |||| |||||| ||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgaca 9195739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 408
Target Start/End: Original strand, 9629395 - 9629457
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt-ggtgtcggtgtcggaca 408  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  9629395 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggaca 9629457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 10339173 - 10339110
Alignment:
Q  346 aatttaagaaaaacacataattcagtgt-aattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||||| ||||||||||||||| ||||||||||||| |||  ||||||||||||||||    
T  10339173 aatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggaca 10339110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 403
Target Start/End: Complemental strand, 8931654 - 8931592
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    |||| ||||| ||||||  |||||||||||| ||||||||||||||| ||| |||||||||||    
T  8931654 ctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcggtgtc 8931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 410
Target Start/End: Original strand, 10842518 - 10842608
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||||||||||| | ||||| |||| ||||| | |||| ||||||||| |||||||| ||||||||||     ||||||||||||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcgaacacgtgtcggtgtcggacatg 10842608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 7027262 - 7027299
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||||||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgt 7027299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 387
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 17302348 - 17302421
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| |||||||||||| |||||||||  |||||||||||||||||  ||| | ||||||||| ||||    
T  17302348 acacaactaataatttaagaaaatcacataattttgtgtaattatatgtgtcattgttgggtcggtgtctgaca 17302421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 5732584 - 5732512
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| |||||| | |||||  ||| ||||| |||||| |||||| || |||||||||||||||||||||||    
T  5732584 ggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgt 5732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 7248360 - 7248432
Alignment:
Q  336 caccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||| ||| | || ||| |||||||||||| |||||||||||||| || || |||||||||| |||||    
T  7248360 caccactaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggaca 7248432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 8389546 - 8389485
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattata 380  Q
    ||||||||| ||||||  |||| ||||| |||||||||||| || |||||||||||||||||||    
T  8389546 acggacacgaacacgt--acactactaataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 8777083 - 8776975
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||||||||| || ||||| || |||||  | |||||||| |||||| | |||| ||||| ||||| | |||| |||| ||||||||||||||| | |    
T  8777083 aagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaag 8776984  T
Q  383 tgtcggtgt 391  Q
    ||| |||||    
T  8776983 tgttggtgt 8776975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 5732521 - 5732474
Alignment:
Q  393 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  5732521 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 10294134 - 10294181
Alignment:
Q  361 cataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||||    
T  10294134 catatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 14796237 - 14796178
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcgg 405  Q
    |||||||||||| |||||||||||| | |||||||| ||||||||| |||| ||| ||||    
T  14796237 aatttaagaaaatcacataattcagcgcaattatatatgtcggtgtcgtgtaggtatcgg 14796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 24833306 - 24833223
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    ||||| |||||| | |||| ||||| || ||||||||| | ||||||| |||||||||||||||  | |||| |||||||||||    
T  24833306 gacactgacacgccgacactactaataagttaagaaaatcgcataatttagtgtaattatatgtcacagtgttgtgtcggtgtc 24833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 440
Target Start/End: Original strand, 2117077 - 2117175
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgct 434  Q
    ||||| |||| ||||| | |||| ||||||||||| || ||||||| ||||||      ||||| ||||||||||| |||||  ||||||||||||||||    
T  2117077 acacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg------tgtcg-tgtcggacatgcctaatcggaggagtgtccgtgct 2117169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 7151411 - 7151469
Alignment:
Q  333 caacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||| ||||| | |||| ||||||||| ||||||||||||||||| |||||    
T  7151411 caacacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgt 7151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 7996430 - 7996380
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| || ||||||||||||||||||||| ||||||||    
T  7996430 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 7996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 8022371 - 8022421
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| || ||||||||||||||||||||| ||||||||    
T  8022371 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 8022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 8714000 - 8714054
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||||||||||||||||||| |  ||| ||||| ||||||||||||||||    
T  8714000 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggaca 8714054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 9024248 - 9024170
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||||||||||| |||| | | | ||||| ||||||  |||||||||| |||||| ||||||||| |||| |||||||    
T  9024248 acacggacacgtcgacacaaatgataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgtcgg 9024170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 20371186 - 20371112
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||  |||||| | ||||| |||| ||||| |||||| ||||||| ||| ||| |||||||||||||||||    
T  20371186 acggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgt 20371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 21924987 - 21924937
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||| | || ||||||||||||||||||||||||||||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgt 21924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 32298667 - 32298609
Alignment:
Q  333 caacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||| |||||||||  | ||||||||| ||||||||||||||||| |||||    
T  32298667 caacaccgctaataatttaagatcatcacataatttagtgtaattatatgtgttggtgt 32298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatagtt 442  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 34595117 - 34595191
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||  |||||| | |||| ||||| ||||| | |||| |||||||||||||||||||| | ||||||||||    
T  34595117 acggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 34595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 1700364 - 1700409
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||| |||| |||||| ||||||||||||||| ||||||||||    
T  1700364 aatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgt 1700409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 4040467 - 4040520
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    |||||||||| |||||||||||| | ||| ||||||| ||||||||| ||||||    
T  4040467 acaccactaataatttaagaaaatcgcattattcagtataattatatatgtcgg 4040520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 6214580 - 6214617
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6214580 aaaaacacataattaagtgtaattagatgtgtcggtgt 6214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 13364752 - 13364707
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| || ||||||||||||||| ||||||||||||||    
T  13364752 aatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 20518345 - 20518402
Alignment:
Q  334 aacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||| ||||| ||||||  |||||| ||||| ||||||||||||| |||||    
T  20518345 aacaccactaacaatttgagaaaattacataaatcagtataattatatgtgttggtgt 20518402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 28862151 - 28862196
Alignment:
Q  363 taattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||||| |||||||||||||| |||| |||||| ||||    
T  28862151 taattcagtgtaatcatatgtgtcggtgtcgtgttggtgtctgaca 28862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 4388103 - 4388159
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||||||| ||| ||||||||||||||| |||| ||| ||||||| ||||    
T  4388103 agaaaatcacataatccagggtaattatatgtgtcagtgtcgtggcggtgtctgaca 4388159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 14721242 - 14721298
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||| ||||||||||||  |||||||||| | ||||||||||||| |||||    
T  14721242 acaccattaataatttaagaaaattacataattcactataattatatgtgttggtgt 14721298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 263448 - 263357
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||| ||||||||  |||| ||||| |||||| |||||||||||||||||||||| ||||| |||| ||||||||||| ||||    
T  263448 acggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagaca 263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 4786411 - 4786340
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| | |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 34897068 - 34897138
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||| |||||||| ||||| |||| ||||| |||||| |||||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 15816207 - 15816114
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||| |||||| | |||| ||||| ||||| | |||| ||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  15816207 atacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggaca 15816114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 14134685 - 14134756
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||| |||  ||||| ||||| |||||| ||||||||||||||||||||||| |||||||||    
T  14134685 gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 25566848 - 25566949
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc--ggacatggctaattcgaggagtgtccgtgcttcat 438  Q
    |||| ||||| | |||| |||||||||||||||||||| | |||||||||| |||| ||||||  ||||| | ||||| ||||||||||| |||||||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgtctgtgcttcat 25566947  T
Q  439 ag 440  Q
    ||    
T  25566948 ag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 12570586 - 12570509
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtg 392  Q
    |||| ||||| |||||||  ||||  |||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  12570586 atacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcgatgtg 12570509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 11803271 - 11803327
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  11803271 aatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgt 11803327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 13844669 - 13844598
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||| | ||||  |||| ||||| |||||| ||||||||| |||||||||||||||||||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 14634206 - 14634127
Alignment:
Q  328 cacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggac 407  Q
    |||||| ||||| |||| ||||||||||||  | |||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtcgatgtcggac 14634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 24362275 - 24362192
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    ||||| |||||| | ||||| |||| ||||| ||| || ||||||||||||||||||||||||||||  ||| |||||||||||    
T  24362275 gacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 29447177 - 29447095
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||| ||||| ||||| |||||| ||||||||||| ||||| || | ||||||||||  |||||||||||||||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggaca 29447095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 34222954 - 34223012
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| ||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  34222954 ctaataatttaataaaatcacataattaagtgtaattatatgtgtcggtatggtgtcgg 34223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 4611535 - 4611608
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| ||||||  |||||||||||||||||||||||| ||||||  |||||||| |||||||    
T  4611535 acaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcggtatcggaca 4611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 403
Target Start/End: Complemental strand, 11927125 - 11927076
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    |||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 33405431 - 33405386
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||    
T  33405431 aatttgagaaaaacacataatttagtgtaattatatgtgtcggtgt 33405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 7658464 - 7658520
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||| ||||| ||||||  |||||||||||||||||||||| |||||||||    
T  7658464 acaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 12570807 - 12570735
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtg 392  Q
    ||||| |||||||  ||||| |||| |||||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  12570807 gacaccgacacgttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatatatgttggtgtg 12570735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 18964163 - 18964235
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtg 392  Q
    ||||| |||||||||| || |||||   ||| |||||| ||||||||||| ||||||||||||||||||||||    
T  18964163 gacactgacacgtcaagacaactaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtg 18964235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 20679473 - 20679397
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||| ||| ||||| |||| ||||| |||||| |||||| ||||||||||||||| ||||||||||    
T  20679473 atacagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 26902216 - 26902160
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||||||||||||||||||||||||||||||||| || |  ||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggaca 26902160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 22651959 - 22652050
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | ||||  |||| ||||| | |||| ||||||||||| | |||||| | |||||||||| ||||||||||||||||    
T  22651959 acggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 29510380 - 29510289
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | ||||  |||| ||||| | |||| |||| |||||||| |||||| | |||||||||| ||||||||||||||||    
T  29510380 acggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 31236647 - 31236580
Alignment:
Q  323 acggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    ||||||||| | ||||  |||| ||||| |||||| ||||||||||| ||||||||||||||||||||    
T  31236647 acggacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 390
Target Start/End: Complemental strand, 39954352 - 39954282
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    ||||| |||||| | ||||| |||| ||||| |||||| ||||||||| |||||||||||||||| |||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 29447469 - 29447518
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||| ||||    
T  29447469 cacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagaca 29447518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 33382066 - 33382021
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||    
T  33382066 aatttaagaaaatgacataattcagagtaattatatgtgtcggtgt 33382021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 8847281 - 8847313
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||||||||||||||||||    
T  8847281 cacataattcagtgtaattatatgtgtcggtgt 8847313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 13203636 - 13203688
Alignment:
Q  329 acgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatat 381  Q
    ||||||||| |||||| ||||| ||||||  ||||||||||||||||||||||    
T  13203636 acgtcaacaacactaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 16642032 - 16641968
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| ||||| ||||| ||||| |||||||||| |||||  |||||||||||||||| |||||||    
T  16642032 acacaactaataatttgagaaatacacataatttagtgtcgttatatgtgtcggtgtcgtgtcgg 16641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 27213554 - 27213601
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcgg 388  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||||    
T  27213554 ctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 28385026 - 28384979
Alignment:
Q  361 cataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||||||||||||||||||||||  |||| ||||| ||||    
T  28385026 cataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagaca 28384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 40332203 - 40332250
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtgg 393  Q
    ||||| |||||| |||||||||||||||||||| | ||||||||||||    
T  40332203 aatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgg 40332250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 926864 - 926790
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||||| ||||||  |||| ||||| |||||| | |||  ||||||||||||||| ||||||||||    
T  926864 acggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgt 926790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 3025558 - 3025608
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgt 3025608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 11944685 - 11944727
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||    
T  11944685 aaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 12606881 - 12606831
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| || |||||||| |||||||||||||||||||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 387
Target Start/End: Complemental strand, 31580174 - 31580133
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||||||| ||||||||| |||||||||||| ||||||    
T  31580174 aatttaagaaaatcacataattgagtgtaattataggtgtcg 31580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 398
Target Start/End: Complemental strand, 34451077 - 34451032
Alignment:
Q  353 gaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    ||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  34451077 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcg 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 387
Target Start/End: Original strand, 38079011 - 38079052
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  38079011 aatttaagaaaatcacatgattcagtgtaattatatgcgtcg 38079052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 41838201 - 41838144
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtg 372  Q
    |||||||||| |||||||| ||||  |||| ||||||| |||| ||||||||||||||    
T  41838201 atacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 7472573 - 7472517
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||| |||||||  ||| ||||||| | |||||||||||||||||| ||||    
T  7472573 acaccactaataatttaaagaaatcacataaattagtgtaattatatgtgtctgtgt 7472517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 391
Target Start/End: Original strand, 8293854 - 8293882
Alignment:
Q  363 taattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||||||||||||||    
T  8293854 taattcagtgtaattatatgtgtcggtgt 8293882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 14731719 - 14731763
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgt 385  Q
    |||| ||||| |||||| ||||||||| |||||||||||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 22493495 - 22493551
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| | ||||| | |||| |||||||||||||||||| |||| |||||||||    
T  22493495 acaccactgataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgt 22493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 36934653 - 36934721
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgt 385  Q
    ||||||||  ||||||| ||||| |||| ||||  | |||| ||||||||||| |||||||||||||||    
T  36934653 acggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 44583 - 44510
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  44583 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggaca 44510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 32308105 - 32308194
Alignment:
Q  319 ggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| |||||| | ||||| |||| ||||| |||||| ||||||||||||||||||| |||||||| |||| |||||||||| |||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 6630985 - 6630897
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||||| | |||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 26329429 - 26329367
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  26329429 aatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagaca 26329367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 15902823 - 15902896
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||| ||| ||||| | |||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  15902823 acaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggaca 15902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 23849505 - 23849460
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  23849505 aatttaagaaaaacacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 7328743 - 7328639
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgctt 435  Q
    |||| ||||| ||||||  |||||||| ||||||||||||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| |||||||    
T  7328743 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgctt 7328644  T
Q  436 catag 440  Q
    |||||    
T  7328643 catag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 21141058 - 21140978
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||| | |||||||| |||||||||| |||||||||||| || |||||||||||| |||||| ||||||| || |||||    
T  21141058 acggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcggagtcgtgtc 21140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 27945024 - 27945104
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||||| |||||| | |||||||||| ||||| ||||||  ||||||||||||||||||| | |||||||||| |||||    
T  27945024 acggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 398
Target Start/End: Complemental strand, 22602756 - 22602705
Alignment:
Q  347 atttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcg 398  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 23128719 - 23128644
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||||| ||| ||||| |||||| || ||||||||||||||| |||||||||||||| |||| ||||||| |||||    
T  23128719 acaccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcgaacatg 23128644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 24339649 - 24339716
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| ||||| | |||| |||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  24339649 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 22868028 - 22868094
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtc 386  Q
    ||||| |||||| | |||||||||| ||| | |||||| ||||||||||||||||||||||||||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 26733287 - 26733361
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| |||||||| ||||| |||| ||||| | |||| ||||||||||||| |||||| ||||||||||||    
T  26733287 acggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgt 26733361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 404
Target Start/End: Original strand, 8160417 - 8160486
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||| |||| ||||||||||||  |||||||| ||||||||||||||||| ||| | ||||||||||||    
T  8160417 acaccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgtcg 8160486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 49107841 - 49107923
Alignment:
Q  355 aaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 439  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||  |||  ||||||  ||||| ||||||||||| ||||||||||    
T  49107841 aaaacacataattgagtgtgattatatgtgtcggtgtcgtgttagtg--ggacatacctaatccgaggagtgtctgtgcttcata 49107923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 5835248 - 5835304
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||| | ||| ||||||  ||||||||||||||||||||||||||||||||    
T  5835248 acaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 17851380 - 17851488
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    ||||||||||||||| ||||| |  |||||  | | ||| || ||||| || | ||| |||| ||||| |||||| ||||||||||||||||||||||||    
T  17851380 aagcacggatacagacacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatg 17851479  T
Q  383 tgtcggtgt 391  Q
    |||| ||||    
T  17851480 tgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 20549792 - 20549848
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  20549792 acaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 27093471 - 27093415
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  27093471 acaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 27184830 - 27184886
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  27184830 acaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 27732286 - 27732243
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggt 389  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  27732286 aatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 5235935 - 5236049
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    |||||| |||||| ||||||| |  |||||  | || ||||| |||||||| ||||| |||| ||||||||||||  | |||||| |||||||||||||     
T  5235935 aagcacagatacaaatacggacattggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatata 5236034  T
Q  383 tgtcggtgtggtgtc 397  Q
    | ||||||| |||||    
T  5236035 tatcggtgtcgtgtc 5236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 408
Target Start/End: Complemental strand, 11272617 - 11272571
Alignment:
Q  362 ataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 11272571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 18013132 - 18013070
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| ||||| ||||||| ||||  ||||||||||||||||||||||||||| |||| |||||    
T  18013132 acactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 19206033 - 19206107
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||||||  ||||| | ||||| |||| ||||| |||||| ||||||||||| | |||||||||||||||||||    
T  19206033 acggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 41020483 - 41020553
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| |||||||| |||| ||||| ||||||  |||| ||||||||| |||||||||||||| ||||||||    
T  41020483 acactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 5548688 - 5548741
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||| |||||| || ||||||||||||||||||||||||| |||| |||||||    
T  5548688 aatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcgg 5548741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 9482946 - 9482991
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| |||| ||||||||||||||||||||||||||||    
T  9482946 aatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 9482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 387
Target Start/End: Original strand, 12278847 - 12278888
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  12278847 aatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 16341508 - 16341561
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||| |||||||    
T  16341508 aatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcgg 16341561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 17307905 - 17307958
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  17307905 aatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 26033513 - 26033444
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    |||| ||||| | |||| |||||||||||||||||||| | |||||||| | ||||||||||| ||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatg 26033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 640138 - 640170
Alignment:
Q  359 cacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||||||||||||||||||||||||||||    
T  640138 cacataattcagtgtaattatatgtgtcggtgt 640170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 7758323 - 7758387
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||||||||| ||||| ||||||  | |||||||||| ||||||| ||||||||||| |||||||    
T  7758323 acaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcgg 7758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 18039019 - 18039067
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    |||| |||||||||||||||||||| | |||||||||| ||||||||||    
T  18039019 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 29787427 - 29787354
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    ||||| |||| ||||| |||||| ||||||||||||||||||  ||||||| |||||  ||||||||| |||||||    
T  29787427 acaccgctaataatttgagaaaatcacataattcagtgtaat--tatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 18213074 - 18213035
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgt 18213035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 22484011 - 22484082
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||||| | ||||| |||| ||||| ||||||   ||||||||||| |||||||||||||||||||    
T  22484011 gacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 37742506 - 37742597
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| | |||| | |||||||||| ||||||| ||||   ||| ||||| |||||| ||||||||||||||  | |||||||||||||    
T  37742506 acggacactgccacgccgacaccactaataatttaacaaaatttcatgattcaatgtaataatatgtgtcggtgtcatatcggtgtcggaca 37742597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 39138462 - 39138501
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgt 39138501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 598191 - 598265
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||||||| ||||| || ||||| |||| |||||||||||| ||| ||||| | ||||||| || ||||||||||    
T  598191 acggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgt 598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 1433437 - 1433519
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||||||  |||||| | |||||  ||| ||||| |||||| ||||| |||  |||||||||||||||||||||| |||||||    
T  1433437 acggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcgg 1433519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 408
Target Start/End: Complemental strand, 3142109 - 3142063
Alignment:
Q  362 ataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| |||||||||||||| ||||||||| ||||||    
T  3142109 ataattcaatgtaatcatatgtgtcggtgttgtgtcggtgccggaca 3142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 3721100 - 3721150
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  3721100 ctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgt 3721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 376
Target Start/End: Original strand, 9232644 - 9232674
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaat 376  Q
    |||||||||||||||||||||||||||||||    
T  9232644 aatttaagaaaaacacataattcagtgtaat 9232674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 440
Target Start/End: Original strand, 11700823 - 11700909
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacat--ggctaattcgaggagtgtccgtgcttcatag 440  Q
    |||| ||||||||||| |||||||||  ||||| |||| || |||||||||||||   ||||||| |||||||||||| || |||||||    
T  11700823 aaaatcacataattcaatgtaattat--gtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgtccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 19992008 - 19992058
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| |||||| ||||||||||||||| ||||||||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgt 19992058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 24146823 - 24146873
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| |||||| ||||||||||| | |||||||||||||||||||    
T  24146823 ctaataattttagaaaatcacataattcaatataattatatgtgtcggtgt 24146873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 387
Target Start/End: Complemental strand, 8239097 - 8239056
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||||||| |  ||||||||||||||||||||||||||    
T  8239097 aatttaagaaaatcttataattcagtgtaattatatgtgtcg 8239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 11665498 - 11665429
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    |||| ||||| ||||| | |||| ||||||||||||| |||||||| |||||| |||  |||||||||||    
T  11665498 acacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcg 11665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 11744219 - 11744178
Alignment:
Q  362 ataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  11744219 ataattcagtgtaattatatgtgtctgtattgtgtcggtgtc 11744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 441
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatagt 441  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 403
Target Start/End: Original strand, 21560523 - 21560572
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtc 403  Q
    |||| |||||||||||||||||||| | |||||||||| || ||||||||    
T  21560523 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtc 21560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 33384613 - 33384576
Alignment:
Q  362 ataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  33384613 ataatttagtgtaattatatgtgttggtgtggtgtcgg 33384576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 2948695 - 2948739
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtg 390  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||||||    
T  2948695 aattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 4794915 - 4794963
Alignment:
Q  360 acataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||||||||||||||||| ||||||||   || |||||||||||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggaca 4794963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 440
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 21826274 - 21826330
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    |||| ||||| ||||||| |||| ||||||| ||||| |||| ||||||||||||||    
T  21826274 acacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtgt 21826330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 23191877 - 23191945
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgt 383  Q
    |||||||||| || ||| | ||||| |||| ||||| |||||| |||||| ||||||||||||| ||||    
T  23191877 atacggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 25481851 - 25481959
Alignment:
Q  283 aagcacggatacagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatg 382  Q
    ||||||||||||||| ||||| |  ||||| || | |||||  |||||| | ||||  |||| ||||| | |||| |||||||||||||||||||| | |    
T  25481851 aagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaag 25481950  T
Q  383 tgtcggtgt 391  Q
    ||| |||||    
T  25481951 tgttggtgt 25481959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 32287521 - 32287465
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt 391  Q
    ||||| |||| ||| | |||||| |||||||||||||| || |||||||||||||||    
T  32287521 acaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgt 32287465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 53192 - 53256
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatg 410  Q
    ||||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  53192 aatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 21055 - 21149
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||| |||||| ||||||| || || ||||||||||||||||| | ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21055 aatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 440
Target Start/End: Original strand, 21211 - 21278
Alignment:
Q  373 taattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||||||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21211 taattatatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 440
Target Start/End: Original strand, 21340 - 21407
Alignment:
Q  373 taattatatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 440  Q
    ||||||||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21340 taattatatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 9802 - 9732
Alignment:
Q  338 ccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||| |||| |||||| ||||    
T  9802 ccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagaca 9732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 1036 - 1109
Alignment:
Q  335 acaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||| |||| ||||| | ||||  |||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  1036 acaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggaca 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 135364 - 135308
Alignment:
Q  341 ctaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||| ||||| |||||| |||||||||| |||||||||||||||||||||| |||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 408
Target Start/End: Original strand, 137792 - 137854
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||||||| |||| ||||||||||| | |||||||| ||||| ||||| ||||||||||    
T  137792 aatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggaca 137854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 28862 - 28913
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||| |||||    
T  28862 aatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 404
Target Start/End: Complemental strand, 85045 - 84962
Alignment:
Q  321 acacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    ||||||||||| | |||||||||  |||||||||||| || ||||||  |||||||||||| |||||||||  ||||| |||||    
T  85045 acacggacacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcg 84962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 23531 - 23585
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||| |||||||||||||||||||||| ||||| |||| || |||||||||||||    
T  23531 aaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggaca 23585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 23440 - 23485
Alignment:
Q  354 aaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcgg 399  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg 23485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 3896 - 3834
Alignment:
Q  346 aatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    ||||||| |||| |||||||||||||||||||| | ||||| |||| |||| |||||||||||    
T  3896 aatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggaca 3834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 440
Target Start/End: Original strand, 20131 - 20279
Alignment:
Q  293 acagatacggataagggacataatacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtg 392  Q
    ||||||||||| |  |||||  | |||||||  |||||| | ||||  |||| ||||| | |||| |||||||||||||||||||| | ||||| ||||     
T  20131 acagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtc 20230  T
Q  393 gtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 440  Q
    |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20231 gtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 26385 - 26446
Alignment:
Q  326 gacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    |||||||| |||||||||| ||||| |||||| ||||||||||| |||  ||||||||||||    
T  26385 gacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 99879 - 99956
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtc 397  Q
    |||||||||| ||| |||||  ||| ||||| ||||||  |||||||||| ||||||||||||||| ||||| |||||    
T  99879 gacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 90829 - 90896
Alignment:
Q  320 gacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcg 387  Q
    ||||| |||||  |||||||| ||| ||||| |||||| || |||||||||||||||||||| |||||    
T  90829 gacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 6037 - 5985
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcg 404  Q
    |||||| |||| ||| |||||||||||||||||||||||| || |||||||||    
T  6037 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcg 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 13383 - 13466
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt-ggtgtcgg 399  Q
    |||||||| |||||| | |||| ||||| ||||| |||||| |||||||||||||| ||||| | | |||||||| ||||||||    
T  13383 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcgg 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 21944 - 21861
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgt-ggtgtcgg 399  Q
    |||||||| |||||| | |||| ||||| ||||| |||||| |||||||||||||| ||||| | | |||||||| ||||||||    
T  21944 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcgg 21861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 92788 - 92851
Alignment:
Q  315 atacggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaatta 378  Q
    |||||||||| |||||| | ||||| |||| ||||| ||||||  |||||||||||||||||||    
T  92788 atacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 241577 - 241668
Alignment:
Q  317 acggacacggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaattatatgtgtcggtgtggtgtcggtgtcggaca 408  Q
    |||||||| |||||| | ||||  |||| |||||   |||| ||||||||| |||||||||||  |||||||||| |||| |||||||||||    
T  241577 acggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 6339 - 6380
Alignment:
Q  361 cataattcagtgtaattatatgtgtcggtgtggtgtcggtgt 402  Q
    ||||||||| ||||||||||||||||||||| || |||||||    
T  6339 cataattcaatgtaattatatgtgtcggtgtcgtatcggtgt 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 412 - 440
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  412 ctaattcgaggagtgtccgtgcttcatag 440  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 14510 - 14574
Alignment:
Q  315 atacggacac-ggacacgtcaacaccactaagaatttaagaaaaacacataattcagtgtaatta 378  Q
    |||||||||| ||||||| | |||| ||||| ||||| | |||| ||||||||||||||||||||    
T  14510 atacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 25809 - 25765
Alignment:
Q  352 agaaaaacacataattcagtgtaattatatgtgtcggtgtggtgt 396  Q
    |||||| ||||||||| |||||||||||| |||||||||| ||||    
T  25809 agaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  394 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 442  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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