View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11610_low_4 (Length: 336)

Name: NF11610_low_4
Description: NF11610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11610_low_4
NF11610_low_4
[»] chr3 (22 HSPs)
chr3 (1-291)||(12100254-12100552)
chr3 (15-132)||(24204984-24205102)
chr3 (24-132)||(3730111-3730217)
chr3 (24-132)||(25074796-25074911)
chr3 (24-118)||(21149074-21149169)
chr3 (24-118)||(25365469-25365564)
chr3 (85-132)||(34185055-34185102)
chr3 (15-132)||(15864831-15864948)
chr3 (86-132)||(52369857-52369903)
chr3 (63-132)||(27505299-27505367)
chr3 (37-132)||(40993278-40993373)
chr3 (89-132)||(49651719-49651762)
chr3 (86-132)||(4987223-4987269)
chr3 (24-73)||(12704659-12704709)
chr3 (25-79)||(35994734-35994788)
chr3 (86-132)||(40052382-40052428)
chr3 (86-132)||(55401145-55401191)
chr3 (37-70)||(1830364-1830397)
chr3 (87-128)||(3631755-3631796)
chr3 (87-132)||(20503536-20503581)
chr3 (84-132)||(16789588-16789636)
chr3 (37-73)||(25892481-25892517)
[»] chr1 (20 HSPs)
chr1 (24-132)||(22794021-22794130)
chr1 (25-121)||(18190062-18190159)
chr1 (82-132)||(42359392-42359442)
chr1 (37-127)||(21145488-21145574)
chr1 (82-132)||(16297224-16297274)
chr1 (9-68)||(40747780-40747840)
chr1 (25-132)||(1486647-1486760)
chr1 (85-132)||(10233325-10233372)
chr1 (25-122)||(40181879-40181977)
chr1 (86-132)||(113363-113409)
chr1 (37-75)||(6936400-6936438)
chr1 (86-132)||(9828125-9828171)
chr1 (37-132)||(20157287-20157388)
chr1 (86-132)||(40917830-40917876)
chr1 (92-132)||(7918157-7918197)
chr1 (37-132)||(11412710-11412806)
chr1 (86-134)||(11634064-11634112)
chr1 (37-132)||(18337350-18337445)
chr1 (84-132)||(21365995-21366043)
chr1 (25-79)||(36878469-36878525)
[»] chr7 (18 HSPs)
chr7 (37-121)||(12278856-12278940)
chr7 (86-132)||(32287406-32287452)
chr7 (89-132)||(24339726-24339769)
chr7 (86-132)||(5409774-5409820)
chr7 (63-132)||(9778553-9778621)
chr7 (24-132)||(23751907-23752015)
chr7 (83-132)||(35749954-35750003)
chr7 (11-73)||(29812666-29812729)
chr7 (63-130)||(43250051-43250118)
chr7 (86-132)||(598278-598324)
chr7 (86-132)||(6490786-6490832)
chr7 (86-132)||(17852070-17852116)
chr7 (86-132)||(43027407-43027453)
chr7 (25-132)||(20549799-20549907)
chr7 (37-73)||(17780086-17780122)
chr7 (37-69)||(18233604-18233636)
chr7 (37-73)||(23930240-23930276)
chr7 (87-131)||(40287306-40287350)
[»] chr6 (13 HSPs)
chr6 (37-133)||(12235461-12235557)
chr6 (81-132)||(9107302-9107353)
chr6 (85-132)||(31959219-31959266)
chr6 (86-132)||(8389411-8389457)
chr6 (25-132)||(34595142-34595250)
chr6 (25-132)||(28152107-28152214)
chr6 (24-132)||(34446572-34446687)
chr6 (86-132)||(8776911-8776957)
chr6 (10-107)||(13689161-13689259)
chr6 (86-132)||(9025448-9025494)
chr6 (24-73)||(12086347-12086397)
chr6 (24-73)||(17168465-17168515)
chr6 (37-104)||(4420149-4420217)
[»] chr5 (14 HSPs)
chr5 (24-132)||(18586232-18586340)
chr5 (24-109)||(7997132-7997218)
chr5 (25-132)||(21190999-21191107)
chr5 (37-109)||(21137710-21137786)
chr5 (87-132)||(38464316-38464361)
chr5 (37-106)||(26205723-26205798)
chr5 (85-133)||(39268540-39268588)
chr5 (86-132)||(2419937-2419983)
chr5 (24-73)||(5467980-5468030)
chr5 (86-132)||(14873592-14873638)
chr5 (86-127)||(17088361-17088402)
chr5 (87-132)||(19820331-19820376)
chr5 (25-73)||(31264446-31264495)
chr5 (24-75)||(18607097-18607149)
[»] chr8 (11 HSPs)
chr8 (24-132)||(30067971-30068080)
chr8 (24-132)||(39820436-39820544)
chr8 (86-132)||(29510236-29510282)
chr8 (82-129)||(40064028-40064075)
chr8 (24-69)||(14692467-14692512)
chr8 (63-132)||(44067574-44067643)
chr8 (37-132)||(1676733-1676828)
chr8 (85-132)||(22652056-22652103)
chr8 (25-132)||(3025559-3025667)
chr8 (63-132)||(16641912-16641980)
chr8 (76-132)||(16987973-16988029)
[»] scaffold0652 (1 HSPs)
scaffold0652 (25-132)||(405-513)
[»] chr4 (15 HSPs)
chr4 (15-132)||(24343505-24343629)
chr4 (69-132)||(53381533-53381596)
chr4 (24-132)||(18513178-18513293)
chr4 (37-121)||(39507073-39507157)
chr4 (86-132)||(3947704-3947750)
chr4 (86-132)||(23292929-23292975)
chr4 (92-132)||(40784029-40784069)
chr4 (15-73)||(20743280-20743339)
chr4 (86-133)||(28084594-28084641)
chr4 (86-132)||(19482749-19482795)
chr4 (24-73)||(31243550-31243600)
chr4 (87-132)||(715548-715593)
chr4 (87-132)||(752874-752919)
chr4 (64-132)||(17876214-17876282)
chr4 (37-73)||(30520438-30520474)
[»] chr2 (17 HSPs)
chr2 (87-132)||(18840956-18841001)
chr2 (25-131)||(37411188-37411295)
chr2 (11-73)||(25544475-25544538)
chr2 (24-132)||(34006933-34007043)
chr2 (86-132)||(37419824-37419870)
chr2 (87-132)||(2438662-2438707)
chr2 (37-73)||(11308006-11308042)
chr2 (69-132)||(10535688-10535751)
chr2 (85-132)||(44860400-44860447)
chr2 (86-132)||(15657945-15657991)
chr2 (87-133)||(21091794-21091840)
chr2 (86-132)||(26769592-26769638)
chr2 (86-132)||(38117102-38117148)
chr2 (24-72)||(10535762-10535811)
chr2 (82-135)||(17776664-17776717)
chr2 (87-132)||(18622673-18622718)
chr2 (24-79)||(12748691-12748747)
[»] scaffold0007 (1 HSPs)
scaffold0007 (63-132)||(225200-225269)
[»] scaffold0199 (1 HSPs)
scaffold0199 (37-132)||(1970-2065)
[»] scaffold0128 (1 HSPs)
scaffold0128 (85-132)||(32773-32820)
[»] scaffold0003 (1 HSPs)
scaffold0003 (86-132)||(241675-241721)
[»] scaffold0793 (1 HSPs)
scaffold0793 (87-132)||(4824-4869)


Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-118; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 12100254 - 12100552
Alignment:
Q  1 aaggacaccagacaccgactcgcataataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccggg 100  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12100254 aaggacaccggacaccgaatcgcataataatttgacaaatgatataattcagtgtaataataggtgtcgtgtctgacactaacgcgtgtccgacaccggg 12100353  T
Q  101 acacacctagtccgaggagtgcccgtgcttcacaggcgggaatct---------aaattctattaattttaagtaatgacctaacattaactcaccaata 191  Q
    |||||||||||||||||||||||||||||||||||||||||||           |||  |||  ||||||||||||||||||||||||||||||||||||    
T  12100354 acacacctagtccgaggagtgcccgtgcttcacaggcgggaataagtgaaaataaaacactag-aattttaagtaatgacctaacattaactcaccaata 12100452  T
Q  192 aattgtattttcatcttaacataaaatctgaaaattcaaattaggacaatacctaatgcaactcatcccctaattctccatatctcattgaaatatatat 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12100453 aattgtattttcatcttaacataaaatctgaaaattcaaattaggacaatagctaatgcaactcatcccctaattcttcatatctcattgaaatatatat 12100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 24205102 - 24204984
Alignment:
Q  15 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtcc 113  Q
    ||||| || |||||||||||| ||| ||||||||| ||||||||| ||| |||||||||| |||||| ||| |||||||||||| |||||| |||| | |    
T  24205102 ccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggacactgacgcgtgtccgacaccaggacacgcctaattc 24205003  T
Q  114 gaggagtgcccgtgcttca 132  Q
    |||||||| ||||||||||    
T  24205002 gaggagtgtccgtgcttca 24204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 3730217 - 3730111
Alignment:
Q  24 ataataatttgaca-aatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| || |  ||||   |||||||||||||||| |||||||||||     
T  3730217 ataataatttgagataatgacataattcagtgtaatcataggtgtcgtgtctgacaccaatgcatgtc---caccgggacacacctaatccgaggagtgt 3730121  T
Q  123 ccgtgcttca 132  Q
    || |||||||    
T  3730120 ccatgcttca 3730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 25074796 - 25074911
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataatagg-----tgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgag 116  Q
    |||||||||||| ||| |||||||||| |||||||| |||||     ||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||    
T  25074796 ataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgag 25074895  T
Q  117 gagtgcccgtgcttca 132  Q
    |||||  |||||||||    
T  25074896 gagtgttcgtgcttca 25074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 21149074 - 21149169
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagga 118  Q
    |||||||||||| ||| ||||||||||||||||||| | || ||||| |||| ||||| |||||||||| |||||| | ||||||||| ||||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatcaaagatgtcgttgtcggacaccaacgtgtgtctgacacc-gaacacacctaatccgagga 21149169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 25365469 - 25365564
Alignment:
Q  24 ataataatttgacaa-atgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagga 118  Q
    |||||||||||| || |||||||||||| ||||||| ||| |||||||||| |||||  | |||||| ||||||| |||||| |||| || |||||    
T  25365469 ataataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcggacaccgatgtgtgttcgacaccaggacacgcctaatctgagga 25365564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 34185102 - 34185055
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  34185102 tgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 34185055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 15864831 - 15864948
Alignment:
Q  15 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtcc 113  Q
    ||||| || |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||  ||||| |||| |||||||| |||| |||    
T  15864831 ccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacacgtgtctgaca-cgggacacgcctaatcc 15864929  T
Q  114 gaggagtgcccgtgcttca 132  Q
     | ||||| ||||||||||    
T  15864930 aaagagtgtccgtgcttca 15864948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 52369857 - 52369903
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  52369857 gtgtccaacaccgggacacacctattccgaggagtgtccgtgcttca 52369903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 27505299 - 27505367
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||| | |  ||||||||||||||||||  |||| ||||||||||| ||||||||||    
T  27505299 ggtgtcgtgtctgacacga-cacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttca 27505367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 40993373 - 40993278
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||| ||||||||||||||||| ||| |||||| |||| ||||| | |   |||||||||||||||||| |||| ||||||||||| || |||||||    
T  40993373 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacga-cacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttca 40993278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 49651762 - 49651719
Alignment:
Q  89 tccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||    
T  49651762 tccgacaccgggacacacctaatccgagaagtgtccgtgcttca 49651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 4987269 - 4987223
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||||||||| |||| |||||    
T  4987269 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttca 4987223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 12704709 - 12704659
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||| ||| |||||||||||| |||||| ||||||||||||||    
T  12704709 ataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtc 12704659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 35994788 - 35994734
Alignment:
Q  25 taataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacac 79  Q
    ||||||||||| |||| ||||||||||||||||| | | |||||||||| |||||    
T  35994788 taataatttgaaaaatcacataattcagtgtaattacaagtgtcgtgtcggacac 35994734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 40052382 - 40052428
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| |||||||||||  |||||||||    
T  40052382 gtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttca 40052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 55401145 - 55401191
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  55401145 gtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 55401191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 1830364 - 1830397
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgt 70  Q
    |||||||||||||||||||||| |||||||||||    
T  1830364 aaatgacataattcagtgtaatcataggtgtcgt 1830397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 3631755 - 3631796
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgc 128  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  3631755 tgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 20503536 - 20503581
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  20503536 tgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttca 20503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 16789636 - 16789588
Alignment:
Q  84 gtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||| ||||||||||||| ||| ||||||| || |||||||    
T  16789636 gtgtgtccgacaacgggacacacctaatcctaggagtgtccatgcttca 16789588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 25892481 - 25892517
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  25892481 aaatgatataattcagtgtaatcataggtgtcgtgtc 25892517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 22794130 - 22794021
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    |||||||||||| ||| ||||||||| ||||||||| |||||||||||||| |||||| |||  |||||||| |||||||||||||| | |||||||||     
T  22794130 ataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtccgacactgacgcatgtccgactccgggacacacctaattcgaggagtgt 22794031  T
Q  123 ccgtgcttca 132  Q
     |||||||||    
T  22794030 acgtgcttca 22794021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 18190159 - 18190062
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 121  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| |||  |||||||||||||||||||||||| |||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacac-aacacgtgtccgacaccgggacacacctaatccgaggagtg 18190062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 42359442 - 42359392
Alignment:
Q  82 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  42359442 acgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 42359392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 21145488 - 21145574
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtg 127  Q
    |||||||||||||||||||||| ||||| |||||||| |    | ||||||||||||||||| ||| |||||| || |||||||| |||||    
T  21145488 aaatgacataattcagtgtaatcataggcgtcgtgtcgg----tgacgtgtgtccgacaccgagacgcacctaatctgaggagtgtccgtg 21145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 16297274 - 16297224
Alignment:
Q  82 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||| |||||| |||| ||||||||||| ||||||||||    
T  16297274 acgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttca 16297224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 40747840 - 40747780
Alignment:
Q  9 cagacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtc 68  Q
    ||||||||||| || |||||||||||| ||| |||||||||||| |||||| |||||||||    
T  40747840 cagacaccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtc 40747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 1486760 - 1486647
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataata------ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagg 117  Q
    ||||||||||| ||| | ||||||||||||||||| |||      ||||||||||| ||||| | |  ||||||||||||||||||| |||| |||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacga-cacgtgtccgacaccgggacacgcctaatccgagg 1486662  T
Q  118 agtgcccgtgcttca 132  Q
    |||| | ||||||||    
T  1486661 agtgtctgtgcttca 1486647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 10233325 - 10233372
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||| ||||||||||| || |||||||| ||||||||||    
T  10233325 tgtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttca 10233372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 40181879 - 40181977
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | ||||||||||||||||| ||| || ||| |||| ||||| |||  |||||| |||||||||||| |||| ||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac-aacacgtgtcctacaccgggacacgcctaatccgaggagtgc 40181977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 113363 - 113409
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||| |||||||||||| |||| |||||||||||||| |||||||    
T  113363 gtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttca 113409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 6936438 - 6936400
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctg 75  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  6936438 aaatgacataattaagtgtaatcataggtgtcgtgtctg 6936400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 9828125 - 9828171
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  9828125 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttca 9828171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 20157388 - 20157287
Alignment:
Q  37 aaatgacataattcagtgtaataata------ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgctt 130  Q
    |||| ||||||||||||||||| |||      ||||||||||| |||||  ||| ||||||||||||| |||||||||| |  |||||||  ||||||||    
T  20157388 aaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgctt 20157289  T
Q  131 ca 132  Q
    ||    
T  20157288 ca 20157287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 40917830 - 40917876
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| |||||||| || ||||||||||    
T  40917830 gtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttca 40917876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 7918197 - 7918157
Alignment:
Q  92 gacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||| ||||||||||| ||||||||||| ||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 11412806 - 11412710
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||| ||| || ||||||||| ||||  ||||| ||| ||||||||||||  |||||  |||  ||| ||||||| ||||||||||    
T  11412806 aaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttca 11412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 11634112 - 11634064
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcaca 134  Q
    |||||||||||| ||||||||| | ||||| ||||| ||||||||||||    
T  11634112 gtgtccgacaccaggacacaccaaatccgaagagtgtccgtgcttcaca 11634064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 18337350 - 18337445
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||| ||||||||||||||||| | | |||||| |||| ||||| |||  ||||||||||| ||||||  |||  ||||||||||| ||||||||||    
T  18337350 aaatcacataattcagtgtaattacaagtgtcggtgtcggacac-aacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttca 18337445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 21366043 - 21365995
Alignment:
Q  84 gtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||| |||||||||| ||||| |||| ||||||||||| ||||||||||    
T  21366043 gtgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 21365995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 36878469 - 36878525
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtc-gtgtctgacac 79  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||| |||||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 12278856 - 12278940
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 121  Q
    |||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||| |||||||||||||||||| ||| |||||||    
T  12278856 aaatgacataattcagtgtaattatatgtgtcgtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtg 12278940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 32287452 - 32287406
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 32287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 24339726 - 24339769
Alignment:
Q  89 tccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  24339726 tccgacaccgggacacgcctaatccgaggagtgcccgtgcttca 24339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 5409820 - 5409774
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  5409820 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 5409774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 9778553 - 9778621
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| ||||| |||  ||||||||||||||||||| |||| ||| ||||||| ||||||||||    
T  9778553 ggtgtcgtgtcggacac-aacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttca 9778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 23751907 - 23752015
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||| ||||| |||| |||||||| |||| |||||  ||||     
T  23751907 ataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacgcgtgtcagaca-cgggacacgcctaatccgataagtgt 23752005  T
Q  123 ccgtgcttca 132  Q
    | ||||||||    
T  23752006 ctgtgcttca 23752015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 35749954 - 35750003
Alignment:
Q  83 cgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||||    
T  35749954 cgtgtgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttca 35750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 29812729 - 29812666
Alignment:
Q  11 gacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    ||||||||| || |||||||||||| ||| ||| |||||| |||||||| ||||||||||||||    
T  29812729 gacaccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 29812666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 43250051 - 43250118
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgctt 130  Q
    ||||||| ||| |||||| ||| |||||||||||| |||||| |||| | ||||||||| ||||||||    
T  43250051 ggtgtcgcgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 598278 - 598324
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  598278 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 598324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 6490786 - 6490832
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| | || ||||||||||| ||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttca 6490832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 17852070 - 17852116
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  17852070 gtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttca 17852116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 43027453 - 43027407
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||| ||||| ||||||||||    
T  43027453 gtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttca 43027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 20549799 - 20549907
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | || |||||||||||||| ||| |||||| |||| ||||| |||   |||||||||  | ||||| |||| ||||||||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac-aacacatgtccgacaatgagacacgcctaatccgaggagtgc 20549897  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  20549898 ccgtgcttca 20549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 17780122 - 17780086
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    ||||||||||||||  |||||||||||||||||||||    
T  17780122 aaatgacataattctatgtaataataggtgtcgtgtc 17780086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 18233636 - 18233604
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcg 69  Q
    |||||||||||||||||||||| ||||||||||    
T  18233636 aaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 23930240 - 23930276
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||||||||||||| |||||||| |||||    
T  23930240 aaatgacataattcagtgtaatcataggtgttgtgtc 23930276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 40287350 - 40287306
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttc 131  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||    
T  40287350 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 12235557 - 12235461
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 133  Q
    |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| ||||||||||| |||| ||| |  |||| |||||||||||    
T  12235557 aaatgacataattcagtgtaatcataggtgtcgtgtccgacaccgacgtgtgtccggcaccgggacacccctaatccaaaaagtgtccgtgcttcac 12235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 9107353 - 9107302
Alignment:
Q  81 aacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9107353 aacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttca 9107302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 31959219 - 31959266
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31959219 tgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 31959266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 34595142 - 34595250
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| | |  ||||| |||||||||||||||||| |||||||||||     
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga-cacgtgtctgacaccgggacacacctaatccgaggagtgt 34595240  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  34595241 ccgtgcttca 34595250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 28152107 - 28152214
Alignment:
Q  25 taataatttgacaaatgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcc 123  Q
    ||||||||||| |||| ||||||||||||||||| | | ||||| ||||| |||||  ||  ||||||||||||||||||  |||| |||||||||||      
T  28152107 taataatttgaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac-gacacgtgtccgacaccgggacaggcctaatccgaggagtgtt 28152205  T
Q  124 cgtgcttca 132  Q
    |||||||||    
T  28152206 cgtgcttca 28152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 34446572 - 34446687
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctg------acactaacgtgtgtccgacaccgggacacacctagtccgag 116  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||||| |      ||||  ||| || || ||||| |||||||||||| ||| ||    
T  34446572 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaag 34446671  T
Q  117 gagtgcccgtgcttca 132  Q
    ||||| ||||||||||    
T  34446672 gagtgtccgtgcttca 34446687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 8776957 - 8776911
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  8776957 gtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttca 8776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 13689259 - 13689161
Alignment:
Q  10 agacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacc 107  Q
    |||||||||| |  |||||||||||| ||| | ||| | |||| |||||| |||||| ||||||| |||||| |||||||||| ||| |||||||||||    
T  13689259 agacaccgacacagataataatttgagaaaataacaaatttcaatgtaatcataggtatcgtgtcggacactgacgtgtgtcccacatcgggacacacc 13689161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 9025494 - 9025448
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  9025494 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 12086397 - 12086347
Alignment:
Q  24 ataataatttgaca-aatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  12086397 ataataatttgagataatgacataattcagtttaatcataggtgtcgtgtc 12086347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 17168515 - 17168465
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||| ||| ||| |||||| |||||||||||||||||||||||    
T  17168515 ataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtc 17168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 4420217 - 4420149
Alignment:
Q  37 aaatgacataattcagtgtaataataggtg-tcgtgtctgacactaacgtgtgtccgacaccgggacac 104  Q
    |||||| ||||||||||||||  ||||||| | ||||| ||||| |||||||||| |||||| ||||||    
T  4420217 aaatgatataattcagtgtaaccataggtgttggtgtcagacaccaacgtgtgtctgacaccaggacac 4420149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 18586340 - 18586232
Alignment:
Q  24 ataataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcc 123  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||| || ||| |||  |||||||| | || ||||||||| | ||||||||| |    
T  18586340 ataataatttgaaaaatgacataatacagtgtaattataggtgtcgtgtccgagactgacgcatgtccgactctggaacacacctaattcgaggagtgtc 18586241  T
Q  124 cgtgcttca 132  Q
    |||||||||    
T  18586240 cgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 7997218 - 7997132
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacaccta 109  Q
    |||||||||||| ||| ||| ||||| ||||||||| ||| |||||||||| |||||| ||| |||||||||| | |||||||||||    
T  7997218 ataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcggacactgacgcgtgtccgacatcaggacacaccta 7997132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 21191107 - 21190999
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| |||  ||||||||| ||||||||| |||| |||||||||||     
T  21191107 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac-aacacgtgtccgactccgggacacgcctaatccgaggagtgt 21191009  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  21191008 ccgtgcttca 21190999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 21137710 - 21137786
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctg----acactaacgtgtgtccgacaccgggacacaccta 109  Q
    ||||||| |||||||||| ||| |||||||||||||| |    |||| |||| ||||||||||||||||||||||||    
T  21137710 aaatgacgtaattcagtgaaatcataggtgtcgtgtcggtcggacaccaacgcgtgtccgacaccgggacacaccta 21137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 38464361 - 38464316
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttca 38464316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 26205798 - 26205723
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacac 106  Q
    |||||||||||||||||||||| |||||||||      ||||| ||||| |||| || ||||||||||||||||||    
T  26205798 aaatgacataattcagtgtaatcataggtgtcgtgttggtgtcggacaccaacgcgtatccgacaccgggacacac 26205723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 39268588 - 39268540
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 133  Q
    |||||||||||| ||||||| |||| ||||||||||| |||||||||||    
T  39268588 tgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcac 39268540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 2419937 - 2419983
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  2419937 gtgtccgaccccgggacacacctaatccgatgagtgtccgtgcttca 2419983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 5468030 - 5467980
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||||||    
T  5468030 ataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc 5467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 14873592 - 14873638
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||| |||||||||||| |||| ||||||||||| ||||||||||    
T  14873592 gtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttca 14873638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 17088361 - 17088402
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtg 127  Q
    ||||||||||||||||||| |||| ||||||||||| |||||    
T  17088361 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 19820376 - 19820331
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttca 19820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    ||||||||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 18607149 - 18607097
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctg 75  Q
    |||||||||||| ||| | |||||||||| |||||| ||||||||||||||||    
T  18607149 ataataatttgagaaaataacataattcaatgtaatcataggtgtcgtgtctg 18607097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 30068080 - 30067971
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    |||||||||||| ||| |||||||||||||| ||||  |||||| || ||| || ||  ||||||||||||||| |||||||||||| ||||| |||||     
T  30068080 ataataatttgagaaaatgacataattcagtataatcgtaggtgccgagtcggataccgacgtgtgtccgacactgggacacacctaatccgatgagtgt 30067981  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  30067980 ccgtgcttca 30067971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 39820436 - 39820544
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||| |||||||||| |||||||| |||| |||||| ||||     
T  39820436 ataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacgcgtgtccgaca-cgggacacgcctaatccgagaagtgt 39820534  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  39820535 ccgtgcttca 39820544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 29510282 - 29510236
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  29510282 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 29510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 40064028 - 40064075
Alignment:
Q  82 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgct 129  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  40064028 acgtgtgtccgacaccgggacacatctaatccgaggagtgtccgtgct 40064075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 14692467 - 14692512
Alignment:
Q  24 ataataatttgacaaatgacataattcagtgtaataataggtgtcg 69  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||    
T  14692467 ataataatttgagaaatgacataattcagtgtaactataggtgtcg 14692512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 44067574 - 44067643
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| |||||| | | |||||||||||| |||||| |||| | ||||||||| ||||||||||    
T  44067574 ggtgtcgtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttca 44067643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 1676733 - 1676828
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| || |||||||| |||||||||||||| |||||  ||   |||| |||||| | ||||||||| ||||| | ||| ||||||||||    
T  1676733 aaatgacatattttagtgtaatcataggtgtcgtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttca 1676828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 22652056 - 22652103
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttca 22652103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 3025559 - 3025667
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||| ||||| |||||  ||  ||||| ||||| | |||||  ||| |||||||||||     
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac-gacacgtgtctgacactgtgacacggctaatccgaggagtgt 3025657  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  3025658 ccgtgcttca 3025667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 16641980 - 16641912
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| ||||| | | ||||||  ||||||||||||||||| ||||||||||| | ||||||||    
T  16641980 ggtgtcgtgtcggacacga-catgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttca 16641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 16987973 - 16988029
Alignment:
Q  76 acactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||| ||| |||| || |||||||||||| |||| ||||||||||| ||||||||||    
T  16987973 acaccaacatgtgcccaacaccgggacacccctaatccgaggagtgtccgtgcttca 16988029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 513 - 405
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | ||| ||||||||||||| | | |||||| |||| ||||| | || |||||||||||||||||||||||| |||||||||||     
T  513 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacga-cgcgtgtccgacaccgggacacacctaatccgaggagtgt 415  T
Q  123 ccgtgcttca 132  Q
    ||||||||||    
T  414 ccgtgcttca 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 24343505 - 24343629
Alignment:
Q  15 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacacc 107  Q
    ||||| || |||||||||||| ||| | ||||||||||||||||| |||||||||      ||||| |||||  ||| ||||||||||||||||||| ||    
T  24343505 ccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcc 24343604  T
Q  108 tagtccgaggagtgcccgtgcttca 132  Q
    || || |||||||| ||||||||||    
T  24343605 tattctgaggagtgtccgtgcttca 24343629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 53381596 - 53381533
Alignment:
Q  69 gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||| |||||| ||| || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  53381596 gtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttca 53381533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 18513293 - 18513178
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgag 116  Q
    |||||||||||| ||| |||||||||||| |||||| ||| |||||      ||||| |||||  |||||||||||||||| |||||| |||| || |||    
T  18513293 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctgag 18513194  T
Q  117 gagtgcccgtgcttca 132  Q
    ||||| ||||||||||    
T  18513193 gagtgtccgtgcttca 18513178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 39507157 - 39507073
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 121  Q
    |||||| |||||| |||||||| ||||||||  |||| |||||| |   ||||||||||||| |||||||||| |||||||||||    
T  39507157 aaatgatataattaagtgtaatcataggtgttatgtcggacactgatacgtgtccgacaccgagacacacctattccgaggagtg 39507073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 3947750 - 3947704
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  3947750 gtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttca 3947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 23292975 - 23292929
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  23292975 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 23292929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 40784029 - 40784069
Alignment:
Q  92 gacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttca 40784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 20743339 - 20743280
Alignment:
Q  15 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    ||||| || |||||||||||| ||| ||||||||||||||||||| |||||||| |||||    
T  20743339 ccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtc 20743280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 28084594 - 28084641
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 133  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||    
T  28084594 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcac 28084641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 19482749 - 19482795
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| |||||||||||| |||||||||||  |||||||||    
T  19482749 gtgtccgacactgggacacacctaatccgaggagtgttcgtgcttca 19482795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 31243600 - 31243550
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  31243600 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtc 31243550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 715593 - 715548
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 752919 - 752874
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 752874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 17876214 - 17876282
Alignment:
Q  64 gtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| |||||  |||  ||||||||||| ||||||||||| ||| ||||||| | ||||||||    
T  17876214 gtgtcgtgtcagacaccgacgcttgtccgacaccaggacacacctaatccaaggagtgtctgtgcttca 17876282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 30520474 - 30520438
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||||||||||||| |||||||| |||||    
T  30520474 aaatgacataattcagtgtaatcataggtgtagtgtc 30520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 18841001 - 18840956
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 18840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 37411295 - 37411188
Alignment:
Q  25 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 122  Q
    ||||||||||| ||| | |||||||||||||| || ||| |||||| ||||  |||| | || ||||||||||| ||||||| |||||||||||||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacga-cgcgtgtccgacactgggacacgcctagtccgaggagtgc 37411197  T
Q  123 ccgtgcttc 131  Q
    | |||||||    
T  37411196 ctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 25544475 - 25544538
Alignment:
Q  11 gacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 73  Q
    ||||||||| || |||||||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  25544475 gacaccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtc 25544538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 34007043 - 34006933
Alignment:
Q  24 ataataatttgacaaat-gacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 121  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||| ||||  |||||  |   ||||| |||||||| ||||||||| | | |||||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtg 34006944  T
Q  122 cccgtgcttca 132  Q
     ||||||||||    
T  34006943 tccgtgcttca 34006933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 37419824 - 37419870
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  37419824 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 37419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 2438707 - 2438662
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||    
T  2438707 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 2438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 11308042 - 11308006
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtc 73  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11308042 aaatgacataattcagtgtaatcataggtgtcgtgtc 11308006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 10535751 - 10535688
Alignment:
Q  69 gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||| |||||||| ||||||| |||||| |||||| |||| |||||||||||  |||||||||    
T  10535751 gtgtccgacactaatgtgtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttca 10535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 44860400 - 44860447
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| ||||||||||||| | ||||||||| ||||||||||    
T  44860400 tgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttca 44860447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 15657945 - 15657991
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||| ||||||||| |||||||||||||||| || |||||||    
T  15657945 gtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttca 15657991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 21091794 - 21091840
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 133  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||    
T  21091794 tgtcggacaccgggacacacctattccgaagagtgtccgtgcttcac 21091840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 26769592 - 26769638
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  26769592 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 26769638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 38117148 - 38117102
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  38117148 gtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttca 38117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 10535811 - 10535762
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgt 72  Q
    |||||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  10535811 ataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 17776664 - 17776717
Alignment:
Q  82 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcacag 135  Q
    |||||||||||||  |||||||  |||| ||||||||||| |||||||||||||    
T  17776664 acgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgcttcacag 17776717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 18622673 - 18622718
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||| |||||||||||||| || ||||||||||| ||||||||||    
T  18622673 tgtcctacaccgggacacacttaatccgaggagtgtccgtgcttca 18622718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12748691 - 12748747
Alignment:
Q  24 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacac 79  Q
    |||||||||||| ||| ||||||| ||||||||||| |||||||| ||||| |||||    
T  12748691 ataataatttgagaaaatgacatagttcagtgtaatcataggtgttgtgtcggacac 12748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 225269 - 225200
Alignment:
Q  63 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||| |||||| ||| |||| ||||||| |||||| |||| | ||||||||| ||||||||||    
T  225269 ggtgtcgtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttca 225200  T

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Target: scaffold0199 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 1970 - 2065
Alignment:
Q  37 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| || |||||||| |||||||||||||| |||||  ||   |||| |||||| | ||||||||| ||||| | ||| ||||||||||    
T  1970 aaatgacatattttagtgtaatcataggtgtcgtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttca 2065  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 32773 - 32820
Alignment:
Q  85 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||||||||||||||| || ||||||||||| | ||||||||    
T  32773 tgtgtccgacaccgggacacacataatccgaggagtgtcggtgcttca 32820  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 241675 - 241721
Alignment:
Q  86 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  241675 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 241721  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 4869 - 4824
Alignment:
Q  87 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 132  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 4824  T

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