View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11612_low_10 (Length: 357)
Name: NF11612_low_10
Description: NF11612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11612_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 16 - 338
Target Start/End: Original strand, 32909602 - 32909931
Alignment:
| Q |
16 |
gaaacatgcttagtcatttggtggtatatgcttgaatcgtaaagtgtatcgtcaaatgttgcgtgcaatttagttgtctgtgtatgatcta-aaaagctc |
114 |
Q |
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| T |
32909602 |
gaaacatgcttagtcatttggtggtatatgcttgaatcgtaaagtgtatcgtcaaatgttgcgtgcaatttagatgtccgtgtatgatcttgaaaagctc |
32909701 |
T |
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| Q |
115 |
aaaatatcaatatcttttaacaaaaagagcttctcat------gggtaatttttagagtatattaaatttatgtcatggtgatggctcatggtaatcttt |
208 |
Q |
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| T |
32909702 |
aaaatatcaatatcttttaacaaaaagagcttctcatagtcatgggtaatttttagaatatattaaatttatgtcatggtgatggctcatggtaatcttt |
32909801 |
T |
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| Q |
209 |
agaatctattcaaagttaagttacataaatcgcggacacatcttactatatgtttgaggtccatagcttgagcgttatgctttattcatattttgtgtcg |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
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| T |
32909802 |
agaatctattcaaagttaagttacataaatcgcggacacatcttactatatgtttgaggtccatagcttgagcgttatgctttattcattttttgtgttg |
32909901 |
T |
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| Q |
309 |
atggctcatttgtaattggttttgtgttga |
338 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32909902 |
atggctcatttgtaattggttttgtgttga |
32909931 |
T |
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