View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11612_low_9 (Length: 374)

Name: NF11612_low_9
Description: NF11612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11612_low_9
NF11612_low_9
[»] scaffold0185 (2 HSPs)
scaffold0185 (275-374)||(3869-3968)
scaffold0185 (299-374)||(4148-4223)
[»] chr3 (54 HSPs)
chr3 (275-374)||(45969915-45970014)
chr3 (275-374)||(19720333-19720432)
chr3 (275-374)||(9266975-9267074)
chr3 (275-374)||(14262036-14262135)
chr3 (275-367)||(14262322-14262414)
chr3 (275-374)||(14161871-14161970)
chr3 (275-374)||(14171865-14171964)
chr3 (275-374)||(20853975-20854073)
chr3 (275-371)||(33372406-33372502)
chr3 (275-374)||(45970194-45970294)
chr3 (275-374)||(49986527-49986627)
chr3 (275-374)||(5800605-5800704)
chr3 (275-374)||(14162150-14162248)
chr3 (275-374)||(16721991-16722090)
chr3 (275-374)||(19113044-19113143)
chr3 (275-374)||(45003496-45003595)
chr3 (275-374)||(4204709-4204807)
chr3 (275-374)||(16722270-16722369)
chr3 (275-374)||(33372683-33372782)
chr3 (275-374)||(19112764-19112864)
chr3 (275-367)||(30500327-30500418)
chr3 (275-374)||(5800884-5800982)
chr3 (275-374)||(11003732-11003831)
chr3 (275-374)||(21633175-21633274)
chr3 (275-374)||(43572389-43572488)
chr3 (275-363)||(24490209-24490297)
chr3 (287-374)||(35741864-35741950)
chr3 (287-374)||(36990939-36991025)
chr3 (287-374)||(37016379-37016465)
chr3 (276-374)||(52552967-52553065)
chr3 (278-371)||(17649292-17649384)
chr3 (275-336)||(27946182-27946243)
chr3 (278-367)||(38283553-38283642)
chr3 (275-374)||(20853695-20853795)
chr3 (275-374)||(30500043-30500140)
chr3 (275-374)||(14171587-14171685)
chr3 (275-374)||(21632901-21632995)
chr3 (275-374)||(43572670-43572768)
chr3 (275-374)||(45003775-45003873)
chr3 (275-374)||(15328463-15328559)
chr3 (280-374)||(52552695-52552791)
chr3 (275-371)||(47575554-47575649)
chr3 (275-374)||(49986807-49986906)
chr3 (287-374)||(35740829-35740914)
chr3 (275-374)||(35995678-35995777)
chr3 (280-350)||(27946114-27946183)
chr3 (300-374)||(45058770-45058843)
chr3 (275-374)||(35995957-35996053)
chr3 (275-374)||(17465367-17465467)
chr3 (288-372)||(32998415-32998497)
chr3 (275-374)||(1068928-1069026)
chr3 (299-371)||(15328742-15328815)
chr3 (275-374)||(17465646-17465745)
chr3 (275-327)||(3425974-3426026)
[»] chr7 (46 HSPs)
chr7 (275-374)||(25772610-25772709)
chr7 (275-374)||(28218442-28218541)
chr7 (275-374)||(41600237-41600336)
chr7 (275-374)||(28218178-28218278)
chr7 (275-374)||(20419536-20419635)
chr7 (275-374)||(20419815-20419915)
chr7 (275-374)||(23383779-23383878)
chr7 (275-374)||(23704940-23705038)
chr7 (275-374)||(41599958-41600057)
chr7 (275-374)||(6465855-6465953)
chr7 (275-374)||(12006541-12006639)
chr7 (275-374)||(12006819-12006918)
chr7 (275-374)||(20458970-20459068)
chr7 (275-374)||(20963773-20963871)
chr7 (275-374)||(23704662-23704760)
chr7 (276-371)||(48648263-48648357)
chr7 (275-374)||(48672558-48672657)
chr7 (275-374)||(20963494-20963594)
chr7 (275-374)||(16995200-16995298)
chr7 (275-374)||(48672277-48672378)
chr7 (275-371)||(6466087-6466183)
chr7 (275-374)||(23383499-23383599)
chr7 (275-374)||(38879723-38879823)
chr7 (275-374)||(38880003-38880099)
chr7 (275-374)||(10409653-10409751)
chr7 (279-374)||(1250485-1250580)
chr7 (278-374)||(7657972-7658070)
chr7 (288-374)||(14646928-14647015)
chr7 (275-374)||(20458692-20458790)
chr7 (275-374)||(25772364-25772462)
chr7 (302-372)||(7842467-7842536)
chr7 (314-374)||(24195075-24195135)
chr7 (293-374)||(44816851-44816934)
chr7 (299-374)||(14800935-14801010)
chr7 (299-374)||(15247927-15248002)
chr7 (275-374)||(33133416-33133514)
chr7 (288-374)||(14795563-14795648)
chr7 (288-374)||(15242555-15242640)
chr7 (322-372)||(24194910-24194960)
chr7 (293-374)||(33131651-33131732)
chr7 (299-374)||(14630360-14630433)
chr7 (280-350)||(23258228-23258297)
chr7 (277-374)||(48648508-48648603)
chr7 (276-374)||(7658248-7658342)
chr7 (329-374)||(10409428-10409473)
chr7 (276-367)||(31851242-31851331)
[»] chr8 (37 HSPs)
chr8 (275-374)||(10108370-10108469)
chr8 (275-374)||(14820573-14820672)
chr8 (275-374)||(30789786-30789885)
chr8 (275-374)||(7689802-7689901)
chr8 (275-374)||(42606032-42606131)
chr8 (275-374)||(43851665-43851763)
chr8 (275-374)||(21147936-21148036)
chr8 (275-374)||(5554869-5554968)
chr8 (275-374)||(10108649-10108748)
chr8 (275-374)||(14820295-14820393)
chr8 (285-374)||(42112995-42113083)
chr8 (275-374)||(18044108-18044205)
chr8 (275-374)||(10171422-10171521)
chr8 (275-374)||(21148215-21148314)
chr8 (285-374)||(5555148-5555237)
chr8 (280-372)||(30789513-30789604)
chr8 (275-374)||(43481593-43481693)
chr8 (275-374)||(7689524-7689622)
chr8 (275-374)||(26136685-26136784)
chr8 (300-367)||(26532807-26532875)
chr8 (275-373)||(35367410-35367509)
chr8 (275-374)||(2583599-2583699)
chr8 (275-374)||(2583320-2583419)
chr8 (275-374)||(14767786-14767882)
chr8 (275-374)||(26136964-26137062)
chr8 (278-374)||(17623166-17623261)
chr8 (288-374)||(38726700-38726786)
chr8 (275-374)||(42113263-42113359)
chr8 (275-374)||(20875698-20875795)
chr8 (293-372)||(21144786-21144865)
chr8 (279-374)||(22494663-22494757)
chr8 (299-365)||(21144598-21144664)
chr8 (299-371)||(14767530-14767603)
chr8 (288-372)||(35368695-35368777)
chr8 (275-374)||(20877026-20877123)
chr8 (299-374)||(22848525-22848600)
chr8 (294-374)||(44162682-44162762)
[»] chr6 (23 HSPs)
chr6 (275-374)||(9481182-9481281)
chr6 (275-374)||(32017783-32017881)
chr6 (275-374)||(26385278-26385377)
chr6 (276-374)||(19284130-19284228)
chr6 (275-374)||(24731935-24732037)
chr6 (280-374)||(9154884-9154979)
chr6 (275-374)||(18500315-18500413)
chr6 (286-374)||(30458911-30459000)
chr6 (288-374)||(21069527-21069614)
chr6 (275-374)||(24732217-24732315)
chr6 (278-374)||(26385553-26385649)
chr6 (276-374)||(34884558-34884649)
chr6 (299-374)||(3230141-3230216)
chr6 (275-367)||(30617967-30618054)
chr6 (275-374)||(2299588-2299691)
chr6 (286-374)||(10321744-10321829)
chr6 (286-374)||(33714494-33714586)
chr6 (287-374)||(21070815-21070903)
chr6 (319-374)||(9481461-9481516)
chr6 (275-337)||(18500646-18500707)
chr6 (299-374)||(17142700-17142776)
chr6 (283-374)||(30459180-30459269)
chr6 (300-374)||(30618240-30618315)
[»] chr5 (40 HSPs)
chr5 (275-374)||(6817123-6817221)
chr5 (275-374)||(23979180-23979279)
chr5 (275-374)||(14143902-14144000)
chr5 (275-374)||(18336735-18336833)
chr5 (275-374)||(24837448-24837547)
chr5 (275-374)||(31799640-31799739)
chr5 (275-374)||(18336467-18336567)
chr5 (275-374)||(7126196-7126295)
chr5 (275-374)||(17762283-17762381)
chr5 (275-374)||(24650978-24651077)
chr5 (275-374)||(24837169-24837268)
chr5 (275-374)||(29445085-29445183)
chr5 (276-374)||(41001632-41001729)
chr5 (275-371)||(30512288-30512383)
chr5 (275-371)||(30552628-30552723)
chr5 (275-374)||(14411697-14411796)
chr5 (275-374)||(17762561-17762660)
chr5 (279-374)||(31799919-31800013)
chr5 (300-374)||(20709235-20709311)
chr5 (275-374)||(14144180-14144279)
chr5 (275-374)||(24074303-24074402)
chr5 (279-374)||(29444810-29444905)
chr5 (280-374)||(7125923-7126016)
chr5 (276-374)||(4919269-4919366)
chr5 (275-374)||(4918989-4919089)
chr5 (275-374)||(994025-994123)
chr5 (299-374)||(22571101-22571176)
chr5 (277-374)||(24650704-24650799)
chr5 (310-374)||(24074581-24074645)
chr5 (275-374)||(14411945-14412043)
chr5 (275-374)||(20709491-20709589)
chr5 (288-374)||(28070479-28070563)
chr5 (293-374)||(41001374-41001452)
chr5 (275-374)||(41424516-41424615)
chr5 (276-374)||(993751-993846)
chr5 (280-374)||(27159236-27159327)
chr5 (275-374)||(6817400-6817499)
chr5 (275-374)||(27158991-27159089)
chr5 (287-374)||(28071776-28071864)
chr5 (275-374)||(41425730-41425830)
[»] chr4 (52 HSPs)
chr4 (275-374)||(9516889-9516988)
chr4 (276-374)||(9516611-9516709)
chr4 (275-374)||(26252516-26252615)
chr4 (275-372)||(48259823-48259920)
chr4 (275-374)||(9396978-9397076)
chr4 (276-374)||(15640994-15641093)
chr4 (275-374)||(31090340-31090439)
chr4 (275-374)||(46046703-46046801)
chr4 (277-374)||(9618982-9619079)
chr4 (275-374)||(9619258-9619357)
chr4 (275-374)||(38573969-38574067)
chr4 (276-374)||(34063983-34064081)
chr4 (275-371)||(41946965-41947058)
chr4 (278-374)||(3018014-3018111)
chr4 (285-374)||(15640726-15640814)
chr4 (275-374)||(31090060-31090160)
chr4 (275-374)||(31943950-31944049)
chr4 (278-374)||(35376407-35376502)
chr4 (278-374)||(38574247-38574343)
chr4 (275-374)||(3273899-3273996)
chr4 (275-373)||(3018292-3018388)
chr4 (300-374)||(7819040-7819113)
chr4 (276-374)||(35376164-35376261)
chr4 (280-374)||(48579871-48579965)
chr4 (275-374)||(12904747-12904845)
chr4 (275-374)||(13132220-13132317)
chr4 (280-374)||(37012712-37012806)
chr4 (277-374)||(48260030-48260126)
chr4 (280-372)||(43312214-43312306)
chr4 (275-374)||(37012986-37013084)
chr4 (280-367)||(48580152-48580239)
chr4 (278-367)||(9396702-9396791)
chr4 (278-374)||(13131943-13132040)
chr4 (275-344)||(31218290-31218359)
chr4 (287-372)||(36888961-36889044)
chr4 (275-367)||(41947142-41947232)
chr4 (275-374)||(20069579-20069676)
chr4 (275-374)||(31944229-31944328)
chr4 (275-327)||(3273621-3273673)
chr4 (275-374)||(31083376-31083475)
chr4 (299-374)||(34064261-34064336)
chr4 (275-337)||(7819336-7819398)
chr4 (287-372)||(12520649-12520736)
chr4 (299-363)||(12904874-12904938)
chr4 (275-374)||(18667568-18667668)
chr4 (275-374)||(18713239-18713340)
chr4 (275-350)||(36887680-36887755)
chr4 (300-374)||(4355907-4355980)
chr4 (275-337)||(46934071-46934133)
chr4 (317-374)||(36699503-36699559)
chr4 (284-337)||(51029089-51029142)
chr4 (319-367)||(18713004-18713052)
[»] chr1 (42 HSPs)
chr1 (275-374)||(18462286-18462384)
chr1 (299-374)||(24467906-24467981)
chr1 (275-374)||(48072240-48072339)
chr1 (275-374)||(4906962-4907061)
chr1 (275-374)||(4907241-4907340)
chr1 (275-374)||(33628690-33628789)
chr1 (275-374)||(39711351-39711450)
chr1 (275-374)||(39826325-39826424)
chr1 (275-374)||(52058287-52058386)
chr1 (275-374)||(17606587-17606684)
chr1 (275-374)||(24467629-24467727)
chr1 (275-374)||(33628969-33629068)
chr1 (275-374)||(34749384-34749483)
chr1 (275-374)||(39826050-39826149)
chr1 (275-374)||(52058011-52058110)
chr1 (275-374)||(8292804-8292903)
chr1 (275-374)||(29696565-29696663)
chr1 (275-374)||(30299232-30299330)
chr1 (275-372)||(17502011-17502107)
chr1 (279-374)||(18462563-18462658)
chr1 (275-374)||(20995947-20996045)
chr1 (275-374)||(26271164-26271263)
chr1 (275-374)||(30299510-30299609)
chr1 (299-374)||(39711097-39711171)
chr1 (275-374)||(8293086-8293186)
chr1 (275-370)||(39970928-39971024)
chr1 (275-367)||(48071961-48072053)
chr1 (278-374)||(17606307-17606407)
chr1 (280-374)||(26266420-26266514)
chr1 (300-374)||(30252177-30252251)
chr1 (294-374)||(42510034-42510113)
chr1 (287-374)||(42510293-42510381)
chr1 (277-365)||(43539349-43539437)
chr1 (299-374)||(29696837-29696911)
chr1 (275-374)||(34749138-34749236)
chr1 (275-358)||(27039638-27039720)
chr1 (275-374)||(43539626-43539725)
chr1 (275-337)||(18342333-18342395)
chr1 (280-374)||(37236723-37236817)
chr1 (288-350)||(17500782-17500844)
chr1 (275-333)||(20995698-20995756)
chr1 (275-374)||(39970645-39970745)
[»] chr2 (38 HSPs)
chr2 (275-374)||(23806231-23806330)
chr2 (286-374)||(26135828-26135916)
chr2 (275-374)||(17463370-17463469)
chr2 (275-374)||(19251749-19251847)
chr2 (275-374)||(23854688-23854787)
chr2 (275-374)||(26236127-26236226)
chr2 (275-374)||(26236374-26236472)
chr2 (287-372)||(30959953-30960037)
chr2 (275-371)||(15106067-15106163)
chr2 (275-374)||(19251471-19251569)
chr2 (275-374)||(44098901-44099000)
chr2 (275-374)||(15106346-15106443)
chr2 (275-367)||(42671005-42671097)
chr2 (275-374)||(17850587-17850685)
chr2 (275-374)||(17850865-17850964)
chr2 (275-374)||(26560556-26560653)
chr2 (275-367)||(34548574-34548665)
chr2 (275-374)||(20498747-20498844)
chr2 (311-374)||(20499024-20499087)
chr2 (279-374)||(30390463-30390558)
chr2 (299-374)||(39878126-39878201)
chr2 (275-374)||(22263470-22263571)
chr2 (275-374)||(13254497-13254596)
chr2 (275-374)||(23046707-23046806)
chr2 (275-373)||(17463092-17463189)
chr2 (278-374)||(13254715-13254811)
chr2 (275-374)||(42670717-42670818)
chr2 (287-372)||(12419004-12419088)
chr2 (287-372)||(12431064-12431148)
chr2 (294-374)||(22263211-22263290)
chr2 (275-374)||(26136096-26136195)
chr2 (299-373)||(34548705-34548778)
chr2 (299-356)||(21481025-21481082)
chr2 (275-322)||(23855025-23855072)
chr2 (287-350)||(30958696-30958758)
chr2 (275-374)||(23047864-23047960)
chr2 (309-374)||(23854945-23855009)
chr2 (287-335)||(13284731-13284779)
[»] scaffold0117 (1 HSPs)
scaffold0117 (280-374)||(12261-12355)
[»] scaffold0449 (2 HSPs)
scaffold0449 (275-374)||(7478-7578)
scaffold0449 (276-374)||(7227-7325)
[»] scaffold0809 (2 HSPs)
scaffold0809 (275-374)||(1411-1509)
scaffold0809 (275-374)||(1689-1784)
[»] scaffold0352 (2 HSPs)
scaffold0352 (275-372)||(4667-4764)
scaffold0352 (275-372)||(5959-6057)
[»] scaffold0141 (2 HSPs)
scaffold0141 (301-374)||(8601-8674)
scaffold0141 (275-363)||(8325-8413)
[»] scaffold0361 (2 HSPs)
scaffold0361 (275-374)||(4562-4662)
scaffold0361 (275-374)||(4842-4940)
[»] scaffold0176 (1 HSPs)
scaffold0176 (275-374)||(15911-16006)
[»] scaffold0477 (2 HSPs)
scaffold0477 (299-374)||(5027-5101)
scaffold0477 (275-333)||(4880-4938)
[»] scaffold0881 (2 HSPs)
scaffold0881 (275-374)||(219-319)
scaffold0881 (275-371)||(501-595)
[»] scaffold0157 (1 HSPs)
scaffold0157 (287-372)||(181-268)


Alignment Details
Target: scaffold0185 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 3869 - 3968
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 4223 - 4148
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| ||||| |  ||||| ||| ||||||||| || |||||||||||||   |||||||||||||||||    
T  4223 gtaatattagagaatttcaattttaatccctgtaaaaaaaaatatttagattatgttgttgtaatttcagattctt 4148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 5e-35; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 45969915 - 45970014
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 19720333 - 19720432
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 19720432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 9266975 - 9267074
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14262036 - 14262135
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 14262414 - 14262322
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttca 14262322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14161871 - 14161970
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| | | ||||||| ||||||||||||||||||||||||||||| ||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14171964 - 14171865
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||| || |||||||||||| ||||||||||||||| |||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20854073 - 20853975
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||  |||||||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  20854073 gggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 33372406 - 33372502
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||| | |||||| || |||||||||||| ||||||||||||||||||||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagatt 33372502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 45970294 - 45970194
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||| ||| ||||||||||||||||||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattct 45970195  T
Q  374 t 374  Q
    |    
T  45970194 t 45970194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 49986527 - 49986627
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||  ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  374 t 374  Q
    |    
T  49986627 t 49986627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 5800605 - 5800704
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||  ||||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14162248 - 14162150
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaag-agatttagattttgtccttgtaatttcagattctt 14162150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 16721991 - 16722090
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||  ||||||||| || ||||||||| ||||| |||||||||||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 19113143 - 19113044
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||||  ||||||||  |||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 45003496 - 45003595
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||| ||||| | ||||| | |||||||||||| |||||||||||||||||||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 4204709 - 4204807
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| | ||||||| ||||| ||||||||| |||||| | |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaa-aagatttagattatgtccctgtaatttcagattctt 4204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 16722369 - 16722270
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| | |||||||||| |||| |||| |||||||||||| |||||||||||||||| ||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 33372782 - 33372683
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| || ||||||| | ||| ||||| |||||||||||| |||||||||||||||||||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 19112764 - 19112864
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||  |||||||||| |||||||||||||||||| ||| |||||| |||||||||||| |||||||| ||||||| |||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  374 t 374  Q
    |    
T  19112864 t 19112864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 30500418 - 30500327
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||| ||||||| ||||| |||||||||| ||||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttca 30500327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 5800982 - 5800884
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| |||||||||||| ||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 11003732 - 11003831
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  |||||||||  |||||||||||||||||| |||||| || |||| ||||||| ||||| |||||||||||||||||    
T  11003732 gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattctt 11003831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 21633274 - 21633175
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || || | ||||| |||||||||| ||||| | |||||||||| | ||||||| |||||||||||| |||||||||||||||||||||||    
T  21633274 gggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 21633175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 43572389 - 43572488
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| || || |||||||||| ||||| |||||||||||| ||||||||  || ||||||||| |||||||||||||||||||||||    
T  43572389 gggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattctt 43572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 363
Target Start/End: Complemental strand, 24490297 - 24490209
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaat 363  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||||||||||| || |||||| |||||||| ||| | ||||||||||    
T  24490297 gggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctgcaaaaaaaaagatttaaattttatccctgtaat 24490209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 35741950 - 35741864
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| |||||||||| ||||||| |||||||||| ||||||||| ||| |||||||||||||||||| |||| ||||||||    
T  35741950 cttttggtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaag-tttagattatgtccctgtcattttagattctt 35741864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 36991025 - 36990939
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattctt 36990939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 37016465 - 37016379
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattctt 37016379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 52553065 - 52552967
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||  |||||| ||||  |||||||||| ||||||  |||||||||| ||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattctt 52552967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 17649384 - 17649292
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    |||||| ||||||| | ||| |||||| ||| |||||||||||||||| | || |||||| |||||||||||| ||||||||||||||||||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctggaaaaaa-aagatttagattttgtccctgtaatttcagatt 17649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 27946243 - 27946182
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaa 336  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgtaaaaa 27946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 38283553 - 38283642
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||||||||  |||| |||||||||  |||||||||||||||||| ||||||||| || ||||||||| ||| ||| ||||||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttca 38283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20853695 - 20853795
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| ||||||||  || ||||||||| || |||||||||| ||||||| |||||||| |||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattct 20853794  T
Q  374 t 374  Q
    |    
T  20853795 t 20853795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 30500043 - 30500140
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| |||||||  |||| |||||||||| ||||| |||||||||||| ||||||||  || ||||||||| |||||||||||||||| ||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaa--aaaatttagattttgtccctgtaatttcatattctt 30500140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14171587 - 14171685
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| | ||||| ||||| |||||||||| |||||||| ||||| |   ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaa-aagatttagattttgtccctgtaatttcaaattctt 14171685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 21632901 - 21632995
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||     |||||||| ||||||||| ||||| |||||  |||||||||||||||||||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaatt-----tttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctt 21632995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 43572768 - 43572670
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  |||| ||||||||    ||||||||||||||| | ||||||||| || ||||||||| |||||||||||||||||||||||    
T  43572768 gggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattctt 43572670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 45003873 - 45003775
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| || ||| ||||| |||||||||| ||||| |||||||||| | ||||||||| ||||||||||||  |||||| |||||||| ||||||    
T  45003873 gggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaa-aagatttagatttagtccctataatttcatattctt 45003775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 15328463 - 15328559
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| || || ||||||||||| |||| || ||||||||| ||||||||| ||   ||||||| |||||||||||||||| ||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaaaa---ttagattttgtccctgtaatttcatattctt 15328559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 52552695 - 52552791
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa--gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||| |||||  |||||||||  |||| || ||||||||  ||||||||| ||  |||||||||| |||||||||||||||||||||||    
T  52552695 aatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaatttcagattctt 52552791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 47575649 - 47575554
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||| |||| || ||| | ||||||| ||||||||| ||||||||||| ||||||||| || | ||||||| |||| |||||||||||||||    
T  47575649 gggtaaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgtaaaaaa-aaaaattagattttgtctctgtaatttcagatt 47575554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 49986906 - 49986807
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaaga-agatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||| | ||||||||| | | ||||||||| ||| | |||||||||| |||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgt-cttgtaatttcatattct 49986808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 35740829 - 35740914
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| |||||||||| ||||||||||||||||||  |||||||| ||| |||||||| |||||||||||||| | ||||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaa-aag-tttagattttgtccctgtaattttaaattctt 35740914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 35995678 - 35995777
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| || || |||||||||| |||||||||||||||||| |||| ||       |||||||| |||||||||||||||||||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 27946114 - 27946183
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagatt 350  Q
    |||| ||||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| ||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaa-aagatttagatt 27946183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 45058843 - 45058770
Alignment:
Q  300 taatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||  ||||||||||  |||||||||| |||||||||| |||| ||||||||||||||||||    
T  45058843 taatattagcgaattctagttttagtccccgtaaaaaaga-gatttagattttgtctctgtaatttcagattctt 45058770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 35996053 - 35995957
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| ||   ||||| | |||| | ||||||||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa---ttagaatttgtctcagtaatttcagattctt 35995957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 17465367 - 17465467
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtc-cctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||   ||||||||| |||||| | ||||||| | ||||||||| | ||||||||||  ||| ||||||||||||||||||    
T  17465367 gggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagattct 17465466  T
Q  374 t 374  Q
    |    
T  17465467 t 17465467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 372
Target Start/End: Complemental strand, 32998497 - 32998415
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||| ||||| |||||||||| |||||| ||| ||||| | ||||||||| ||| |||||||| |||||||||||||||||||||    
T  32998497 ttttggtccctgtaatattagcgaattctggtgttagttcctgtaaaaaa-aag-tttagattctgtccctgtaatttcagattc 32998415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 1069026 - 1068928
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||| | | |||||||||||||| ||||||  |||| ||||||||| ||| |||| ||| ||||||||| |||||||||||||    
T  1069026 gggttaatacctcttttggtctctgcaatattagtgaatttcggtttaggtccttgtaaaaaaaaagtttta-attttgtccctgtcatttcagattctt 1068928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 15328815 - 15328742
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagatt 371  Q
    |||||||||| |||||  |||||||||||   ||||||| || |||||||||| ||||||||||||||||||||    
T  15328815 gtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagatt 15328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 17465745 - 17465646
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  |||||||||| ||||| | |||||| ||  ||||||| | || ||||| ||| ||||||||||| || ||||||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattctt 17465646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 3426026 - 3425974
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtcc 327  Q
    |||| |||| ||||||| | ||| |||||||||| ||||||||||||||||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtcc 3425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 25772709 - 25772610
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| |||||  ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 28218541 - 28218442
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 41600336 - 41600237
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 28218178 - 28218278
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  374 t 374  Q
    |    
T  28218278 t 28218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20419536 - 20419635
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||||  ||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 20419635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20419915 - 20419815
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||  |||||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  374 t 374  Q
    |    
T  20419815 t 20419815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 23383878 - 23383779
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||| || |||||| |||||||||||| |||||||||||||||| ||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 23705038 - 23704940
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 23704940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 41599958 - 41600057
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  |||| |||||||||| ||||| |||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 6465855 - 6465953
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||| |||| ||||  |||||||||| |||||||||||||||||| ||||||||| || ||||||||||||| | |||||||||||||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaa-aatatttagattatgttcttgtaatttcagattctt 6465953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 12006541 - 12006639
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| || ||| ||||| |||||||||||||||||||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattctt 12006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 12006918 - 12006819
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| || |  |||||||||| |||||||| ||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20459068 - 20458970
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||| ||| | ||||||||| |||||||||||| |||| ||||||||||||||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20963871 - 20963773
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||| ||||| || |||||||||  ||||||||||||||||||||||    
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaataaaatttagatttagtccctgtaatttcagattctt 20963773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 23704662 - 23704760
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||| ||  ||||||||| |||||||| ||| |||||||||||||||||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaa-aagatttacattttgtccctgtaatttcagattctt 23704760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 48648263 - 48648357
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    |||||||||||||||| ||||| ||||||| || ||||| || ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaa-aagatttagattttgtccctgtaatttcagatt 48648357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 48672657 - 48672558
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||| ||||| |||||||||||| |||||| || |||||||||||| | |||||||||||||||||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20963494 - 20963594
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||||||||||| |||| ||||| |||||||||||||||||  |||||||||| ||| |||||| ||||||||||||  ||||||||||||| |||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  374 t 374  Q
    |    
T  20963594 t 20963594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 16995200 - 16995298
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||| ||||| |||||||||| | ||||||||| || ||||||||| |||||||||||||||||||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaa-aatatttagattttgtccctgtaatttcagattctt 16995298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 48672277 - 48672378
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt--aaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||||||| ||||||| ||||| |||||||||||||||| |||||||||||  |||  |||||| ||||||||||||  ||| ||||||||||||||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagattc 48672376  T
Q  373 tt 374  Q
    ||    
T  48672377 tt 48672378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 6466183 - 6466087
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||||||||||| ||  | |||||||||| ||||| |||||||||||  ||||||||| ||||||| |||| ||||| ||||||||||||||    
T  6466183 gggtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttggattctgtccgtgtaatttcagatt 6466087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 23383499 - 23383599
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||||||||  |||||| ||| | ||||||||||||||||||||||||||||| | | |||||| |||||||||||| ||||||| |||||||| |||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattct 23383598  T
Q  374 t 374  Q
    |    
T  23383599 t 23383599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 38879723 - 38879823
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||  ||||||| | ||||||||| || |||||||||| |||||||||||||||| |||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  374 t 374  Q
    |    
T  38879823 t 38879823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 38880099 - 38880003
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||||||||||  ||||||||||||||||  | ||||||| || ||||||||| |||||||||||||||||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc--tttaaaaaa-aaaatttagattttgtccctgtaatttcagattctt 38880003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 10409751 - 10409653
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  |||  |||||||||| |||||||| ||||||||| ||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaa-aagatttagattttgtctctgtaattttagattctt 10409653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 1250580 - 1250485
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||| ||||  |||||||||| ||||||| |||||||||  ||||||  | |||||||||||| ||||||| |||||||| ||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattctt 1250485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 7657972 - 7658070
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa--gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||||| ||||  |||||||||| ||||| |||||||| ||| ||||||||| ||  |||||||||||||||| |||||||||| ||||||    
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctt 7658070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 14647015 - 14646928
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| ||||||| || |||||||||||||||||| ||||||||| || | |||||||| | ||||||| |||||||||||||    
T  14647015 ttttagtccctgtaatatgagcgaattccggttttagtccctgtaaaaaaaaaaagtttagattctatccctgtcatttcagattctt 14646928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20458692 - 20458790
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  | |||| ||||| |||||||||  |||||||||||||||||| |||||| || || ||||||||| |||| ||||||||||||||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataa-aaaatttagattttgtcgctgtaatttcagattctt 20458790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 25772364 - 25772462
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| || |||||||   ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaa-aagatttagattttgtccttgtaatttcatattctt 25772462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 7842467 - 7842536
Alignment:
Q  302 atattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||||| |||||| ||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||    
T  7842467 atattagcgaattctggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaatttcagattc 7842536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 24195135 - 24195075
Alignment:
Q  314 tccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  24195135 tccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24195075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 44816851 - 44816934
Alignment:
Q  293 gtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa--gatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| |||||||||| ||||| |||||||||||  ||||||||| ||  ||||| |||| |||||||||||||||||||||||    
T  44816851 gtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattctt 44816934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 14801010 - 14800935
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| || ||||| |||||||||||| ||||||||| ||  |||||||| ||||||||| |||||||||||||    
T  14801010 gtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattctt 14800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 15248002 - 15247927
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| || ||||| |||||||||||| ||||||||| ||  |||||||| ||||||||| |||||||||||||    
T  15248002 gtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattctt 15247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 33133514 - 33133416
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||| |||||| ||||| ||||||  |||||| |||||||||||||| ||||||||| ||| ||||||| |||||||| | |||| ||||||||    
T  33133514 gggttaatatatcttttggtccctgtaatacgagtgaaatccggttttagtccctgtaaaaaaaaag-tttagatcatgtccctatcatttgagattctt 33133416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 14795563 - 14795648
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  ||||||| || ||||||| |||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||    
T  14795563 ttttagtccttgtaatatgagcgaattccagttttagtctttgtaaaaaaaaag-tttatattatgtccctgttatttcagattctt 14795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 15242555 - 15242640
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  ||||||| || ||||||| |||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||    
T  15242555 ttttagtccttgtaatatgagcgaattccagttttagtctttgtaaaaaaaaag-tttatattatgtccctgttatttcagattctt 15242640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 24194910 - 24194960
Alignment:
Q  322 tagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  24194910 tagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 24194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 33131651 - 33131732
Alignment:
Q  293 gtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||||| || || ||||||||||||||| |||||| || || ||||||||| ||||||| | |||||||||||||    
T  33131651 gtccctgtaatatgagcgatttccggttttagtccctgtaaataaaaaaatttagattctgtccctatcatttcagattctt 33131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 14630360 - 14630433
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| || |||||||||||||||||| ||||||||| | |  ||||||| ||||||||| |||||||||||||    
T  14630360 gtaatatgagcgaattccggttttagtccctgtaaaaaaaagg--ttagattctgtccctgtcatttcagattctt 14630433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 23258297 - 23258228
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagatt 350  Q
    |||||||||||| ||| | |||||||||| ||||||||||||| |||| ||||||||| ||| ||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgtaaaaaaaaag-tttagatt 23258228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 48648603 - 48648508
Alignment:
Q  277 gtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||  |||||| |||||||||||||||| ||||| || ||||||||  | || |||| |||||||||||| ||||  |||||||| ||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtc--tctataaaaaaagatttagattttgtctatgtaattttagattctt 48648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 7658342 - 7658248
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| ||||| |||||||||  ||||| |||||||||||  ||||||||| ||     ||||| |||||||||||||| ||||||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgtaaaaaaaaa----aagattttgtccctgtaatttaagattctt 7658248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 10409428 - 10409473
Alignment:
Q  329 tgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| || |||||||||||| ||||| |||||||||||||||||    
T  10409428 tgtaaataaaaagatttagattttgtccttgtaatttcagattctt 10409473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 367
Target Start/End: Original strand, 31851242 - 31851331
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||||||| ||||||| ||||   ||||||||||||||| || ||||||| | ||||||||  || ||||||||| ||||  ||||||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaa--aaaatttagattctgtcattgtaatttca 31851331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 10108370 - 10108469
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14820672 - 14820573
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 30789885 - 30789786
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 7689901 - 7689802
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 42606131 - 42606032
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| |||||| |||||||||| |||||||||| |||||||||||| |||||| ||||||||| ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattctt 42606032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 43851665 - 43851763
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaa-aagatttagattttgtccctgtaatttcagattctt 43851763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 21147936 - 21148036
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||| |||| ||||||| ||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  374 t 374  Q
    |    
T  21148036 t 21148036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 5554869 - 5554968
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||| ||||| ||||||| |||||||| ||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 10108748 - 10108649
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| ||||||||||  ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14820295 - 14820393
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 14820393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 42112995 - 42113083
Alignment:
Q  285 ctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  42112995 ctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaa-aagatttagattatgtccctgtaatttaagattctt 42113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 18044205 - 18044108
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||  || | ||| ||| |||||||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgtaaaaa--aataattatattttgtccctgtaatttcagattctt 18044108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 10171521 - 10171422
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| | ||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |  ||||||||| |||||||||||||| ||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 21148314 - 21148215
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | ||||||||||||||||||||||||||||| ||||||||| || | ||||||| ||||| |||||||||| ||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattctt 21148215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 5555237 - 5555148
Alignment:
Q  285 ctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||  ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  5555237 ctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 5555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 30789513 - 30789604
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| |||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| |||||||||||| |||| ||||||||||||||||    
T  30789513 aatatgtcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaa-aagatttagattttgtctctgtaatttcagattc 30789604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 43481693 - 43481593
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||||||||||| ||| | |||||||||| |||||||||||||||||  ||| |||||| |||||||| ||| |||||||||||||||| |||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattct 43481594  T
Q  374 t 374  Q
    |    
T  43481593 t 43481593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 7689524 - 7689622
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| ||| |||||||| |||||| || |||||||||||| ||||| |||||||||||||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagatt-tgtccttgtaatttcagattctt 7689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 26136685 - 26136784
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| || || |||||||||| ||||||| |||||||||| ||||||||| || ||||||||| ||||| |||||||||||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattctt 26136784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 26532807 - 26532875
Alignment:
Q  300 taatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  26532807 taatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttca 26532875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 35367410 - 35367509
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaaga-agatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| | |||||||| |||||||||||||| ||| ||||||||| | | | ||||||| ||||||||||||||||||||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgtaaaaaaaataaaattagattttgtccctgtaatttcagattct 35367509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 2583699 - 2583599
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||||||||||| ||||  |||||||||| ||||||  ||||||| || ||| |||||| |||||||| ||| ||||||| ||||||||||||||    
T  2583699 gggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattct 2583600  T
Q  374 t 374  Q
    |    
T  2583599 t 2583599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 2583320 - 2583419
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  | || |||||||||| ||||| || ||||||| | ||||||| | |||||||||||| ||||||||||||||| |||||||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14767882 - 14767786
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| || || ||||||||||| |||| || ||||||||| ||||||||| ||   ||||||| |||||||||||||||| ||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaaaa---ttagattttgtccctgtaatttcatattctt 14767786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 26137062 - 26136964
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccat-gtaaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| | ||||| ||||| |||||||||||||||| | |||||||||| | |||||||  || | ||||||| ||||||||||||||||||||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaa--aaaaattagattttgtccctgtaatttcagattct 26136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 17623261 - 17623166
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| |||||||  |||| ||||||||||  ||||| ||||||||| | ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaa-aagatttagattttgtccttgtaatttcaaattctt 17623166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 38726700 - 38726786
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||| ||||||| ||  ||||||||||||||||| | ||||||| ||  |||||||| ||||| |||||||||||||||||    
T  38726700 ttttggtccctgtaatatgagcaaattccggttttagtccctataaaaaaaaaagtttagattttgtccttgtaatttcagattctt 38726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 42113359 - 42113263
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| ||||| |||||||||  ||||| |||||||||| | ||||||||| ||   ||||||||||||||| |||||||| ||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaaaa---ttagattatgtccctttaatttcaaattctt 42113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20875698 - 20875795
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| ||||||| ||  |||| |||||||||||| ||||||||| ||| ||| |||||||||||| | |||||||||||||    
T  20875698 gggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtccttgtaaaaaa-aag-tttggattatgtccctattatttcagattctt 20875795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 21144865 - 21144786
Alignment:
Q  293 gtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| |||||||||  |||||||| ||||||||| | ||||| | || ||||||||| ||||| |||||||||||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattc 21144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 22494757 - 22494663
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| |||| || ||||| ||||||| ||||||||| ||||||||| |  ||||||||  ||||||||| | |||||||||||||||| ||||||    
T  22494757 aaatacctctcttcgtccctgtaatatcagtgaattctggttttagttcc-gtaaaaaaagagatttagaatttgtccctgtaatttcaaattctt 22494663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 21144598 - 21144664
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaattt 365  Q
    |||||||||| |||||||||||||||||| ||||| ||| || || |||||| |||||| |||||||    
T  21144598 gtaatattagagaattccggttttagtccctgtaacaaaaaaaatatagattttgtcccggtaattt 21144664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 14767530 - 14767603
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagatt 371  Q
    |||||||||| |||||  |||||||||||   ||||||| || |||||||||| ||||||||||||||||||||    
T  14767530 gtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagatt 14767603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 372
Target Start/End: Complemental strand, 35368777 - 35368695
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||||||| | | |||||||| ||||| | |||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||    
T  35368777 ttttagtctctgaaatattagcgaatttctgttttagttcttgtaaaaaa-aag-tttaaattatgtccctgtaatttcagattc 35368695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20877123 - 20877026
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| ||||||| || |||||||||||||||||| | ||||||| ||| ||| |||| | ||||| | |||||||||||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccctataaaaaa-aag-ttttgattctatccctatcatttcagattctt 20877026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 22848600 - 22848525
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||| ||||||||| ||||||| | || ||||||||||| | |  ||||||||| ||||||    
T  22848600 gtaatattagcgaattccgattttagtccttgtaaaataaaaaatttagattattttcgagtaatttcatattctt 22848525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 44162682 - 44162762
Alignment:
Q  294 tcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||| |||||| ||||||  ||| ||||||||| ||  |||| ||| ||| ||||| |||||||||||||    
T  44162682 tccctgtaatattagcgaattctggttttgatccttgtaaaaaaaaaagtttacattttgttcctgtcatttcagattctt 44162762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 9481182 - 9481281
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 32017881 - 32017783
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 32017783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 26385278 - 26385377
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||| |||||| |||||||||||||||| |||| |||||||||||| |||||||||||||| | ||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 19284130 - 19284228
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| || |  |||||||||| ||||||| ||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattctt 19284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 24731935 - 24732037
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagat---ttagattatgtccctgtaatttcagatt 371  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| || |    ||||||| ||||||||||||||||||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagatt 24732034  T
Q  372 ctt 374  Q
    |||    
T  24732035 ctt 24732037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 9154884 - 9154979
Alignment:
Q  280 aatatctcttttagtcccagtaatatt-agtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||  |||| |||||||| || |||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9154979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 18500315 - 18500413
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||||  ||||||||| ||||| |||||||||||| ||||| ||| |||||||||||| |||||||||||||||| ||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaa-aagatttagattttgtccctgtaatttcatattctt 18500413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 30458911 - 30459000
Alignment:
Q  286 tcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||| |||||||||||||||| |||||||||| |  |||||||| || ||||||||||||||| ||||||||||||||||||    
T  30458911 tcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattctt 30459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 21069527 - 21069614
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| ||||||| || |||||||||||||||||| ||||||||| || | |||||||| |||||||||||| ||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatatcagattctt 21069614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 24732315 - 24732217
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||  ||| ||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 26385649 - 26385553
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||||| ||||| |||||||||| |||||||| ||||||||| ||||||||  |||||||||||  ||| |||| ||||||| ||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattctt 26385553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 34884558 - 34884649
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||||||| ||       |||||||||||||||||||||||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgtaaaaaaaaa-------attatgtccctgtaatttcagattctt 34884649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 3230216 - 3230141
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||| ||||||||| ||||||| | |||||||||||| ||||| | |||||||| ||||||    
T  3230216 gtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctt 3230141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 30617967 - 30618054
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||| | |||||||    ||||||||| ||||||||||||||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcc-tttaaaaaa----atttagattttgtccctgtaatttca 30618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 2299691 - 2299588
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt----aaaaaagaagatttagattatgtccctgtaatttcagat 370  Q
    ||||||||||||||||| || || |||||||||| |||||||||||||||| | |||    |||||| ||    |||||| |||||||||||||||||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgttaaaaaaaaataaataatagattttgtccctgtaatttcagat 2299592  T
Q  371 tctt 374  Q
    ||||    
T  2299591 tctt 2299588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 10321744 - 10321829
Alignment:
Q  286 tcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||| |||||||||| |||||||||||||||||| || ||||||  |   ||||||||| |||||||||||||| ||||||    
T  10321744 tcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata---ttagattatatccctgtaatttcatattctt 10321829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 33714494 - 33714586
Alignment:
Q  286 tcttttagtcccagtaatattagtgaattccggtttta--gtccatgtaaaaaagaa--gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||| |||||||||| ||||||||||||||  |||| ||||||||| ||  |||||||||| ||||| |||||||||| ||||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattctt 33714586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 21070903 - 21070815
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||| ||||||| || |||||||||| ||||||  ||||||||| || | |||||||| | |||||||||| ||||||||||    
T  21070903 cttttagtccctgtaatatgagcgaattccggtattagtctctgtaaaaaaaaaaagtttagattctatccctgtaatatcagattctt 21070815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 9481516 - 9481461
Alignment:
Q  319 ttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||||| |||||||||||| ||||| |||||||||||||||||    
T  9481516 ttttcgtccctgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 9481461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 18500707 - 18500646
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaa 337  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||| |||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc-tgtaaaaaa 18500646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 17142700 - 17142776
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| ||||| | | |||||||  ||||||||| || | ||||||||||||||||||||||||| ||||||    
T  17142700 gtaatattagcgaatttcaggtttagtctctgtaaaaaaaaaaaatttagattatgtccctgtaatttcaaattctt 17142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 30459269 - 30459180
Alignment:
Q  283 atctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || || |||||||||| ||||| |||||||| ||   |||||||| ||||||  |||||||||  |||||||||||||||||    
T  30459269 atctcttttcgttcctgtaatattagcgaatttcggttttaatctccgtaaaaaaaaagatt--gattatgtcattgtaatttcagattctt 30459180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 30618315 - 30618240
Alignment:
Q  300 taatattagtgaattccggttttagtccatgtaaaaaagaag-atttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||| || ||||||| | ||||||||| ||  ||||||||| |||||||||||||| ||||||||    
T  30618315 taatattagcgaatttcgattttagttcttgtaaaaaaaaaatatttagattttgtccctgtaattttagattctt 30618240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 6817123 - 6817221
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaa-aagatttagattatgtccatgtaatttcagattctt 6817221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 23979279 - 23979180
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14143902 - 14144000
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 14144000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 18336833 - 18336735
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||| ||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 24837547 - 24837448
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 31799640 - 31799739
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||||  ||||||||| |||||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 18336467 - 18336567
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||||||||||| |||||  ||||||||| |||||||| ||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  374 t 374  Q
    |    
T  18336567 t 18336567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 7126295 - 7126196
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  |||| |||||||||| |||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 17762283 - 17762381
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||| ||| ||| |||||||||||||||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttatattttgttcctgtaatttcagattctt 17762381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 24651077 - 24650978
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||| || |||||| | |||||||||||| ||||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattctt 24650978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 24837169 - 24837268
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||| ||| |||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 29445183 - 29445085
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||||| ||||| |||||||||| ||||||| |||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 29445085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 41001729 - 41001632
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| || |||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaa-aagatttagattttgtccctataatttcagattctt 41001632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 30512288 - 30512383
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||||||||||| ||||| ||||||||||||||||  ||||||||||| ||||||||| | ||||||||||  |||||||||||||||||||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaa-aggatttagatttggtccctgtaatttcagatt 30512383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 30552628 - 30552723
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||||||||||| ||||| ||||||||||||||||  ||||||||||| ||||||||| | ||||||||||  |||||||||||||||||||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaa-aggatttagatttggtccctgtaatttcagatt 30552723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 14411697 - 14411796
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||| |||| |||||||| ||| ||||  |||||||||||||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattctt 14411796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 17762660 - 17762561
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||| |||||| |||||| ||||||||||| ||||||||| |||||||||||| ||||||  |||||||||||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattctt 17762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 31800013 - 31799919
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||||| |||||  ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtcc-tgtaaaaaaaaagatttagattttgtccatgtaatttcagattctt 31799919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 20709235 - 20709311
Alignment:
Q  300 taatattagtgaattccggttttagtccatgt--aaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||| ||||||    
T  20709235 taatattagtgaattccggttttagtccatgtgaaaaaaaaaagatttagattctgtccctgtaatttcaaattctt 20709311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14144279 - 14144180
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||| | |||||||||  |||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 14144180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 24074303 - 24074402
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  |||||||||| ||||| |||||||||||| ||||||||| || ||||||||| |||| ||||||||||| ||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 29444810 - 29444905
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||| ||||| |||||||||  |||||| | ||||||||| ||||||||| | |||||||||||||||| |||||||||| ||||||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattctt 29444905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 7125923 - 7126016
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||| || || |||||||||| |||||||| ||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaa-aagatttagattttgtccctataatttcagattctt 7126016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 4919366 - 4919269
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| ||| | | |||||||| |||||||||||||||| | ||||||||| || | ||||||| |||||||||||||||||||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaa-aaaaattagattttgtccctgtaatttcagattctt 4919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 4918989 - 4919089
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| |||||||  || | |||||||||| ||||| |||||||||| | ||||||||| || |||||||||| |||||||||||||||| |||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  374 t 374  Q
    |    
T  4919089 t 4919089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 994123 - 994025
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || |||| ||||| |||||| ||| ||||| |||||||||||| |||| || | |||||||||||| ||||||||||||| |||||||||    
T  994123 gggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattctt 994025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 22571101 - 22571176
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||| ||||||||| ||||||||| || ||||||||||| || ||||||||||| ||||||    
T  22571101 gtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattctt 22571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 24650704 - 24650799
Alignment:
Q  277 gtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| ||||||| ||||| |||||||||  ||||| |||||||| || ||||||||||  ||||||||||| ||| |||||||||||| ||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaa--agatttagattttgttcctgtaatttcatattctt 24650799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 24074645 - 24074581
Alignment:
Q  310 gaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  24074645 gaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 14412043 - 14411945
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||  || |  ||||||||  ||||| |||||||||||| ||||||||| || ||||||||| ||||| |||||||||||||||||    
T  14412043 gggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattctt 14411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20709589 - 20709491
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||  |||||||||  |||||  ||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaa-aagatttagattttgtccatgtaatttcatattctt 20709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 28070479 - 28070563
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||| ||||||| |||||||||  |||||||||| |||||||||  || |||||||| ||||| |||||||||||||||||    
T  28070479 ttttggtccctgtaatatgagtgaattctagttttagtccctgtaaaaaa--aggtttagattctgtccttgtaatttcagattctt 28070563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 41001374 - 41001452
Alignment:
Q  293 gtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| |||||||||| ||||| |||||||||||| ||||||||| ||   ||||||| |||||||||||||||| ||||||    
T  41001374 gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaa---ttagattttgtccctgtaatttcatattctt 41001452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 41424516 - 41424615
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||  | |||||||| ||||||||||||  |||| ||||||||| ||  |||||||| ||||||||| |||||||||||||    
T  41424516 gggttaatacctcttttggtccttgcaatattagcgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattctt 41424615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 993751 - 993846
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||  |||||| ||| | |||||||||| |||||||||||||||||| ||||||||| ||   |||||||  |||| |||||||||| ||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaaa---ttagatttagtccttgtaatttcatattctt 993846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 27159327 - 27159236
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||| ||||  |||||||||| ||||| |||||||||||| |||||||   || ||||||||| |||||||||||||| | ||||||    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaa---aaaatttagattttgtccctgtaattttatattctt 27159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 6817499 - 6817400
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||||||||  | || |||||||||| |||||    ||||||||  ||||||||| || ||||||||| |||||||||||||||| ||||||    
T  6817499 gggttaatatctcttttcattcccgtaatattagcgaattttaattttagtctctgtaaaaaaaaaaatttagattttgtccctgtaatttcatattctt 6817400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 27158991 - 27159089
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||  |||||||||| ||||| | |||||||||   || ||||| |||||||| ||| |||||||||||||||||||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaa-aagatttaaattttgtccctgtaatttcagattctt 27159089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 28071864 - 28071776
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagat-ttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| ||||||| || ||||| |||||||||||  ||||||||| || |  ||||||||| ||| |||||||||||||||||    
T  28071864 cttttggtccctgtaatatgagcgaatttcggttttagtcattgtaaaaaaaaaaaaattagattatatccttgtaatttcagattctt 28071776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 41425830 - 41425730
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattct 373  Q
    |||| |||| ||||||| ||||| | ||||| || |||||| | |||| |||| ||||||||| || | |||||||| | ||||||| ||||||||||||    
T  41425830 gggttaatacctcttttggtccctgcaatatcagcgaattctgattttggtccttgtaaaaaaaaaaagtttagattctatccctgtcatttcagattct 41425731  T
Q  374 t 374  Q
    |    
T  41425730 t 41425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 9516988 - 9516889
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||||||  ||||||||| |||||||||||| |||||||||||||||||||||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 9516611 - 9516709
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 9516709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 26252615 - 26252516
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| | ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 48259823 - 48259920
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||| ||| |||||| || |||||||||||| ||||| |||||||||||||||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattc 48259920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 9397076 - 9396978
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| ||||| ||||||||||  ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcagattctt 9396978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 15641093 - 15640994
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| ||||  ||||||||||||||||||||||||| | | ||||||||| || ||||||||||||||||||||||||||||||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 31090439 - 31090340
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| |||||||||| ||||| || ||||||||| ||||||||| || | ||||||| |||||||||||||||||||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 46046801 - 46046703
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || |||| ||||| |||||||||| |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 9618982 - 9619079
Alignment:
Q  277 gtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| || |||| ||||  |||||||||| |||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattctt 9619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 9619357 - 9619258
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||| ||||||||||| |||| |||| |||||||||||| ||||| |||||||||| ||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 38573969 - 38574067
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||| ||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 38574067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 34063983 - 34064081
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| ||||| |||||||||  ||||||  |||||||||| ||||||||| |||||||||||| |||| ||||||||||||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattctt 34064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 41946965 - 41947058
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| ||   ||||||| ||||||||||||||||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgcaaaaaaaaa---ttagattttgtccctgtaatttcagatt 41947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 3018014 - 3018111
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||||| ||||| |||||||||| ||||||||||||||||||  || |||||| |||||||||||| |||||||||||||||| ||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 3018111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 15640726 - 15640814
Alignment:
Q  285 ctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||| ||||| |||||||||| |||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  15640726 ctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 15640814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 31090060 - 31090160
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||||||||  |||||| ||||| |||||||||||||||| || ||||||||| ||| |||||| |||||||||||| |||||||||||||||| |||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  374 t 374  Q
    |    
T  31090160 t 31090160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 31943950 - 31944049
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaa-aaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||| | |||||| ||| |||||||||||| |||||||||||||||| |||||    
T  31943950 gggtaaata-ctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattct 31944048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 35376502 - 35376407
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||| ||||| ||||||||||  |||||| |||||||||| ||||||||| |||||||| ||| |||||||||||||||||| ||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaa-aagatttaaattttgtccctgtaatttcagaatctt 35376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 38574343 - 38574247
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| || |||| ||||| |||||||||| |||||| ||||||||||| |||||| || |||||||||||| |||||||||||||||| ||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattctt 38574247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 3273996 - 3273899
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||| | ||||||| |||||||||||| | |||||||||||||||||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaa-aagatttagattttatccctgtaatttcagattctt 3273899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 3018388 - 3018292
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||| |||||||||||| ||||| |||||||||  ||||| |||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaa-aagatttagatt-tgtccgtgtaatttcagattct 3018292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 7819040 - 7819113
Alignment:
Q  300 taatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||    
T  7819040 taatattagcgaattccggttttagtc-atgtaaataaaaagatttagattttgtccctgtaatttcagattctt 7819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 35376164 - 35376261
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| || |||| ||||| |||||||||| |||||| ||||||||||| ||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaa-aagatttagattttgtctctgtaattttagattctt 35376261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 48579871 - 48579965
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||| ||||| |||||||||  ||| | ||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||||    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctt 48579965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 12904747 - 12904845
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| |||||  ||||||||| |||||  ||||||||||| ||||||||| || ||||||||| ||||| | |||||||||||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaa-aaaatttagattttgtccttataatttcagattctt 12904845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 13132317 - 13132220
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || |||| ||||| |||||||||| ||||| || ||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgtaaaaaa-aagatttagattctgtccctgtaatttcatattctt 13132220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 37012712 - 37012806
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||| ||||  |||||||||| ||||||   ||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 37012806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 48260126 - 48260030
Alignment:
Q  277 gtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||| ||||| |||||||||| |||||  | ||||| ||  ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaa-aagatttagattttgtccctgtaatttcaaattctt 48260030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 43312214 - 43312306
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||||| ||| | ||||| ||||||||||  ||||||| ||||||||| ||||||||| || ||||| ||| |||||||||||||||||||||    
T  43312214 aatatcacttctggtccctgtaatattagcaaattccgattttagtccctgtaaaaaaaaaaatttaaattctgtccctgtaatttcagattc 43312306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 37013084 - 37012986
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||| ||| ||||| |||||||||| |||||| ||||||||||| |||| |||| || | ||||||| |||||||||||||||| ||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaa-aaaaattagattttgtccctgtaatttcatattctt 37012986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 48580239 - 48580152
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||| ||||||| ||||| |||||||||| |||||||||||||| |||   ||||||| | |||||||||| ||||||||||||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttca 48580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 9396702 - 9396791
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||||| ||||||| ||||| |||||||||| ||||| || ||||||||  ||| ||||| |||||||||||| ||||||| ||||||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttca 9396791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 13131943 - 13132040
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||||| ||||  |||||||||  ||||| | |||||||||| ||||||||| || |||||||||||||| | |||||||||||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattctt 13132040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 31218359 - 31218290
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatt 344  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| |||||| || ||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatt 31218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 36889044 - 36888961
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| |||||  ||||||||| |||||  ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  36889044 cttttggtccctataatattagcgaattttggttttagtcc-tgtaaaaaaaaa-atttagattatgtccctgtaatttcagattc 36888961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 41947232 - 41947142
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| | ||||||  || | ||||||| ||||| ||||||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtccttttaaaaa--aaaaattagattttgtccttgtaatttca 41947142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20069676 - 20069579
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||| ||||| ||||| ||||||| || ||||||| ||||| |||| ||||||||| ||| |||||||||||||||| | |||| ||||||||    
T  20069676 gggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgtaaaaaa-aag-tttagattatgtccctatcatttgagattctt 20069579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 31944328 - 31944229
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| ||||  |||||||||| ||||| |||||||||||  ||||||||| || | ||||||| ||||| |||||||||| ||||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattctt 31944229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 3273621 - 3273673
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtcc 327  Q
    ||||||||||||||||| ||||| |||||||||| |||||||| |||||||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtcc 3273673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 31083475 - 31083376
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| || ||||| ||||| ||||||| || ||||||||||||| || |  |||||||| || ||||||||| ||||||| | |||| ||||||||    
T  31083475 gggtaaatgtcccttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattctt 31083376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 34064336 - 34064261
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||| |||| |||||||| |   ||||||| | |||||||||||| |||| ||||||||||||||||||    
T  34064336 gtaatattagtaaatttcggttttaatttctgtaaaataaaagatttagattttgtctctgtaatttcagattctt 34064261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 7819398 - 7819336
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaa 337  Q
    |||||||||||| |||| ||||| |||||||||| ||||| |||||||||||  |||||||||    
T  7819398 gggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtcattgtaaaaaa 7819336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 12520649 - 12520736
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtcc--atgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||||||||||  ||||||||| ||||||| ||||||||||  ||  |||||| ||  |||||||| ||||||| |||||||||||||    
T  12520649 cttttagtccctataatattagcgaattccagttttagtccctattaaaaaaaaaaagtttagattttgtccctataatttcagattc 12520736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 12904938 - 12904874
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaat 363  Q
    |||||||||| |||||  | ||||||||| ||||||||| |||||||| ||| ||||||||||||    
T  12904938 gtaatattagcgaattttgattttagtccctgtaaaaaaaaagatttaaattttgtccctgtaat 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 18667668 - 18667568
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagattta-gattatgtccctgtaatttcagattct 373  Q
    |||| |||| ||||||| ||||| |||||||||| ||||||| |||||| ||| ||||||||| || |   | |||| || |||||||||||||||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgtaaaaaaaaaaaaaaaagattttgaccctgtaatttcagattct 18667569  T
Q  374 t 374  Q
    |    
T  18667568 t 18667568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 18713340 - 18713239
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtc---catgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    |||| |||| ||||||| || || ||| |||||| || || |||||||||||   | ||||||||| |||||||||||| |||| |||||||||||||||    
T  18713340 gggttaatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgtaaaaaa-aagatttagattttgtctctgtaatttcagatt 18713242  T
Q  372 ctt 374  Q
    |||    
T  18713241 ctt 18713239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 36887680 - 36887755
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagatt 350  Q
    |||| |||| ||||||| ||||| |||||||||| |||||  ||||||||||| ||||||||| ||  ||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgtaaaaaaaaaagtttagatt 36887755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 4355907 - 4355980
Alignment:
Q  300 taatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||||||||||||| | ||| ||||| ||| |||||||| ||||  |||||||||| ||||||    
T  4355907 taatattagcgaattccggttttagttcctgt-aaaaacaagctttagattttgtctatgtaatttcatattctt 4355980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 46934071 - 46934133
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaa 337  Q
    |||| |||||| ||||| ||||| |||||||||   ||||||||||||||||| |||||||||    
T  46934071 gggttaatatcacttttggtccctgtaatattaacaaattccggttttagtccgtgtaaaaaa 46934133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 36699559 - 36699503
Alignment:
Q  317 ggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||| | |||||||  | |||||||||||||||||||||||| ||||||||    
T  36699559 ggttttagtccttataaaaaaata-atttagattatgtccctgtaattttagattctt 36699503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 51029142 - 51029089
Alignment:
Q  284 tctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaa 337  Q
    |||||||| ||||| ||||||| || ||||| |||||||||||| |||||||||    
T  51029142 tctcttttggtccctgtaatatgagcgaatttcggttttagtccctgtaaaaaa 51029089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 18713004 - 18713052
Alignment:
Q  319 ttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||| |||| ||||||||| | |||||||||| ||||||||||||||||    
T  18713004 ttttcgtccctgtaaaaaaaacgatttagattttgtccctgtaatttca 18713052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 18462286 - 18462384
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcagattctt 18462384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 24467981 - 24467906
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  24467981 gtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 48072339 - 48072240
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||   ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattctt 48072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 4906962 - 4907061
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||||||||||  |||||||||| ||||||||| | |||||||||| |||||||||||||||| ||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 4907340 - 4907241
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||| ||||  |||| |||||||||| ||||||| |||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 33628690 - 33628789
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||| |||||||||||  |||||||| |||||||||||| |||||| ||||||||||||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctt 33628789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 39711450 - 39711351
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||| ||||||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 39826424 - 39826325
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  |||||||||| ||||| |||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 52058386 - 52058287
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||  ||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 17606684 - 17606587
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaa--aagatttagattttgtccttgtaatttcagattctt 17606587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 24467629 - 24467727
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  |||||| ||||| |||||||||| |||||||  ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcagattctt 24467727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 33629068 - 33628969
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| || | || |||| |||||||||||||||||||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 34749483 - 34749384
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||| | |||||||||  |||||||| ||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 39826050 - 39826149
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||   ||||||||| ||||| || ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 52058011 - 52058110
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  |||||||||  ||||||||||||||||   ||||||||| |||||||||| |||||||||||||||||||||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 8292804 - 8292903
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||| |||||| |||| ||||||||||||| ||||||| | |||||||||||| |||||||| ||||||| ||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 29696565 - 29696663
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||  ||||||||| |||||||||||| |||||| ||||||||| ||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaa-aagatttagattttgtccccgtaatttcatattctt 29696663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 30299232 - 30299330
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||| | || ||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 30299330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 17502107 - 17502011
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||| |||||| ||||| ||||  |||||||||| |||||||||||||||||| | ||||||| ||| |||||||| |||||||||||||||||||||    
T  17502107 gggttaatatcacttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccctgtaatttcagattc 17502011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 18462658 - 18462563
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| |||||||  |||| ||||||||||  ||||||||||||||| | |||| |||| |||||||||||| |||||| ||||||||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattctt 18462563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 20996045 - 20995947
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| |||||   |||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaa-aagatttagattttgtctctgtaatttcatattctt 20995947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 26271263 - 26271164
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| |||||||||||||||||||||||| ||| | ||||||| |||| ||||||||| || ||||||||| ||||||| | |||| ||||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgtaaaaaaaaacatttagattctgtccctatcatttgagattctt 26271164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 30299609 - 30299510
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || |||| ||| | ||||||||||  |||| |||||||||| | ||||||||| |||||||||||| |||||||||||||| ||||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 39711097 - 39711171
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  39711097 gtaatattagcgaattccggttttagtccctgtaaaaaa-aagatttagattttgtccttgtaatttcatattctt 39711171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 8293186 - 8293086
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| |||||  ||||||||  ||||||  |||||||||| ||||||||| || |||||||||| |||||||||||||||| |||||    
T  8293186 gggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 8293087  T
Q  374 t 374  Q
    |    
T  8293086 t 8293086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 39971024 - 39970928
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagat 370  Q
    ||||||||| ||||||| ||||  |||||||||  ||||| |||||||||||| ||| |||||| |||||||||||| |||||||||||||| ||||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagat 39970928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 48071961 - 48072053
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||| |||||||||||| || |  |||||||||| |||||| ||||||||| | ||||| ||| |||||||||||| ||||||||||||||||    
T  48071961 gggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttca 48072053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 17606307 - 17606407
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa----gatttagattatgtccctgtaatttcagattct 373  Q
    |||||| ||||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| ||    |||||||||| ||| |||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  374 t 374  Q
    |    
T  17606407 t 17606407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 26266420 - 26266514
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||||||| |||||||||| ||| | ||||||| |||  ||||||||| || ||||||||| ||||||| | |||| ||||||||    
T  26266420 aatatctcttttagtccctgtaatattagcgaaattcggtttttgtctctgtaaaaaaaaatatttagattctgtccctatcatttgagattctt 26266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 30252251 - 30252177
Alignment:
Q  300 taatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| |||||| ||||||||||| ||||||||  |||||||||||| |||||| ||||||||| ||||||    
T  30252251 taatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattctt 30252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 42510034 - 42510113
Alignment:
Q  294 tcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||| |||||||||||||| ||| ||||||||| |  ||||||||| |||||||||||||||| ||||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaa-ataatttagattttgtccctgtaatttcatattctt 42510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 42510381 - 42510293
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||| ||||| |||||||||| |||||||||||||||||| ||| |||||| || ||||||||| |  |||| |||||||||||||||    
T  42510381 cttttggtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaaaaatttagattctacccctataatttcagattctt 42510293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 43539349 - 43539437
Alignment:
Q  277 gtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaattt 365  Q
    |||||||||||||||  |||  |||| |||||  ||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattt 43539437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 29696911 - 29696837
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||||||||||||  ||||||||| || | ||||||| ||||| |||||||||||||||||    
T  29696911 gtaatattagcgaattccggttttagtcactgtaaaaaa-aaaaattagattttgtccatgtaatttcagattctt 29696837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 34749138 - 34749236
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||  ||||||  |||| |||||||||| |||||| | ||||||||| | ||||||| |||||||||||| |||||| ||||||||| ||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaa-aagatttagattttgtccccgtaatttcatattctt 34749236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 27039638 - 27039720
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccct 358  Q
    |||| |||| ||||||| ||||| ||||||| || ||||||||||||| |||| ||||||||| ||| |||||||| |||||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgtaaaaaaaaag-tttagattttgtccct 27039720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 43539725 - 43539626
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| ||||||||||  ||||||||||||||| | ||||||||| || |  | |||| ||||| |||||||||| ||||||    
T  43539725 gggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgtaaaaaaaaaaaaattgattttgtccatgtaatttcaaattctt 43539626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 18342395 - 18342333
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaa 337  Q
    ||||||||| || |||| ||||| |||||||||| ||||| |||||||||||| |||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaa 18342333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 37236723 - 37236817
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||| | ||||||  ||  |||||||| ||||||    |||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccctataaaaagaaaagtttagattctgtccccaacatttcagattctt 37236817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 17500782 - 17500844
Alignment:
Q  288 ttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagatt 350  Q
    |||| ||||| |||||||||| |||||||||||||||||  ||||||||| ||  ||||||||    
T  17500782 ttttggtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagtttagatt 17500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 20995698 - 20995756
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaa 333  Q
    ||||||||| |||||||  || | |||||||||| |||||||||||||||||| |||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgtaa 20995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 39970645 - 39970745
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||  |||||||||  ||||| |  ||||| ||  ||||||||| || |||||||||| ||||  ||||||||||||||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattct 39970744  T
Q  374 t 374  Q
    |    
T  39970745 t 39970745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 7e-28; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 23806330 - 23806231
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 26135828 - 26135916
Alignment:
Q  286 tcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||| ||||| |||||||||| |||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 26135916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 17463469 - 17463370
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| | ||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| || ||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 19251847 - 19251749
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaa-aagatttagattctgtccttgtaatttcatattctt 19251749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 23854688 - 23854787
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 26236127 - 26236226
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||  |||||||||| |||||| ||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 26236472 - 26236374
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||| || |||||| |||||||||||| |||||||||||||||||||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaaaa-aagatttagattttgtccctgtaatttcagattctt 26236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 30960037 - 30959953
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  30960037 cttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaag-tttagattatgtccctgtaatttcatattc 30959953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 15106067 - 15106163
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||| ||| |||||| || |||||||||||| |||||||||||||| |||||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagatt 15106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 19251471 - 19251569
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||| ||||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaa-aagatttagattttgtccctgtaatttcatattctt 19251569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 44099000 - 44098901
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||| ||||||| || |||||| |||||| || | ||||||||| |  |||||||||||||||||||||||||||||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 15106443 - 15106346
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| || ||||||||| ||||||||| ||  |||||||| |||||||||||||||||||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaa--tttagattttgtccctgtaatttcagattctt 15106346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 42671097 - 42671005
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    ||||||||| ||||||| ||||| ||| |||||| ||||| | |||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttca 42671005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 17850587 - 17850685
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||| ||||||||| | ||||||| |||||||||||| |||| ||||||||| ||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaa-aagatttagattttgtctctgtaatttaagattctt 17850685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 17850964 - 17850865
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| |||||||||||  |||||| || | | |||||||| |||||||||||||||||||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 26560556 - 26560653
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||||| ||||| |||||||||  ||||| || ||||||||| ||||||||  ||||||||||||  ||||||||||||||||||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaa--aagatttagatttagtccctgtaatttcagattctt 26560653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 34548574 - 34548665
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttca 367  Q
    |||||||||  |||||| ||||| ||||||||||||||||  ||||||||||| ||||||||| |||||||||||| ||||| ||||||||||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaa-aagatttagattttgtccatgtaatttca 34548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 20498747 - 20498844
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| |||   |||||||||| ||||| |||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaa-aatatttagattatgtccctgt-atttcagattctt 20498844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 20499087 - 20499024
Alignment:
Q  311 aattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||||||    
T  20499087 aattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 30390463 - 30390558
Alignment:
Q  279 aaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||| ||||  |||||||||| |||||||| ||||| ||| ||||||||| || | ||||||| |||||||||||||||| ||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattctt 30390558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 39878126 - 39878201
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| |||||||||||||||||| |||||||||  | |||||||||||||  ||||||||||||||||||    
T  39878126 gtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattctt 39878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 22263571 - 22263470
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt--aaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||||||| ||||||| || || |||||||||| |||||||||||||||||  |||  |||||| |||||| ||||| |||||||||||||||| ||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattc 22263472  T
Q  373 tt 374  Q
    ||    
T  22263471 tt 22263470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 13254497 - 13254596
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||  || || |||||||||| |||||  ||||||| ||| ||||||| | |||||||||||| ||||| |||||||||||||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 23046707 - 23046806
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||  ||||||| || ||||||||||||| |||  | ||||||| |  ||||||||| |||||||||||||||||||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattctt 23046806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 17463092 - 17463189
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||||||||  |||||| |||||  ||||||||| |||||||||||||||||  ||||||||| || | ||||||| ||||||||||||||||| ||||    
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaa-aaaaattagattttgtccctgtaatttcaggttct 17463189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 13254811 - 13254715
Alignment:
Q  278 taaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||||||  ||| |||||| |||||||| ||| |   |||||||||||||||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatt-taatcctgtaatttcagattctt 13254715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 42670717 - 42670818
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt--aaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||| |||| ||||||| ||||| |||||| ||| |||||||||||||||||| |||  |||||| || | ||||||| ||||| |||||||||| ||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatattc 42670816  T
Q  373 tt 374  Q
    ||    
T  42670817 tt 42670818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 12419088 - 12419004
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| ||||| |||||||||| |||||||||||||||||| | ||||||| ||| |||||||| ||||| || |||||| |||||    
T  12419088 cttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattc 12419004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 12431148 - 12431064
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||| ||||| |||||||||| |||||||||||||||||| | ||||||| ||| |||||||| ||||| || |||||| |||||    
T  12431148 cttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattc 12431064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 22263211 - 22263290
Alignment:
Q  294 tcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| |||||||||| |||||| ||||||||||  | | ||||| |||||||||||| |||||||||||||||| ||||||    
T  22263211 tccctgtaatattagagaattctggttttagtctctatgaaaaa-aagatttagattttgtccctgtaatttcatattctt 22263290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 26136195 - 26136096
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||  |||||||||  ||||| |||||||||||| ||| |||||| |||||||||||| ||||  |||||||||| |||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattct 26136097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 34548778 - 34548705
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    |||||| ||| |||||| | ||||||||||| ||||||| |||||||||||| ||||| ||||||| ||||||||    
T  34548778 gtaatagtagcgaattctgattttagtccatataaaaaa-aagatttagattttgtccttgtaattacagattct 34548705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 21481025 - 21481082
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtcc 356  Q
    |||||||||  ||||||| |||||||||| ||||||||| || |||||||||||||||    
T  21481025 gtaatattaacgaattccagttttagtccttgtaaaaaaaaaaatttagattatgtcc 21481082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggtttt 322  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 30958696 - 30958758
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagatt 350  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| ||||||||| ||| ||||||||    
T  30958696 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagatt 30958758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 23047960 - 23047864
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| || |||| ||||| ||||||| || |||||||||||||  ||| ||||||||| || |   |||||  ||||||||||||| ||||||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgtaaaaaaaaaaa---agattccgtccctgtaattttagattctt 23047864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 23855009 - 23854945
Alignment:
Q  309 tgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||||||||||||  |||||||| || ||||||||| |||| ||||||||| | ||||||    
T  23855009 tgaattccggttttagtccccgtaaaaaa-aaaatttagattttgtctctgtaattttatattctt 23854945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 13284779 - 13284731
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtccatgtaaaa 335  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| |||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaa 13284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 12355 - 12261
Alignment:
Q  280 aatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||| ||||||| ||||| |||||||||| |||||||||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 12261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 7578 - 7478
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| || |||| ||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  374 t 374  Q
    |    
T  7478 t 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 7227 - 7325
Alignment:
Q  276 ggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| ||||||| ||||  |||||||||| |||||| ||| ||||| | ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 1411 - 1509
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| | ||| |||||||| | ||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaa-aagatttagattatgtccctgtaatttcagattctt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 1784 - 1689
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||  ||||||| ||||| |||||||||  |||||||||||||||||| | |||||||    | ||||||||||||| |||||||||||||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattctt 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 4667 - 4764
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    ||||||||| ||||||||||||| | |||||||| ||||||| |||||||||| | ||||||| ||  |||||||| |||||||||||||||||||||    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattc 4764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 6057 - 5959
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaaga-tttagattatgtccctgtaatttcagattc 372  Q
    ||||||||| ||||||| ||||| | |||||||| |||||||| ||||||||| ||||||||| || | |||||||| |||||||||||||||||||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattc 5959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 8674 - 8601
Alignment:
Q  301 aatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||| |||||||||||||||||| | ||||||| |||||||||||| |||||||||||||| ||||||||    
T  8674 aatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 363
Target Start/End: Original strand, 8325 - 8413
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaat 363  Q
    ||||||||| ||||||| ||||| |||||||||| ||||| ||||||||||||  ||||| || |||||||||||| |||||| |||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaat 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 4562 - 4662
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaa-gatttagattatgtccctgtaatttcagattct 373  Q
    ||||||||| ||||||| ||||  |||||||||| |||||||| ||||||||| ||||||||| || |||||| ||| |||||||||||||| |||||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattct 4661  T
Q  374 t 374  Q
    |    
T  4662 t 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 4940 - 4842
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||| ||||||| ||||| ||||||||||  ||||||||||||| ||| ||| ||||| |||||||||||| ||||| |||||||||| ||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgt-aaaaataagatttagattttgtccttgtaatttcatattctt 4842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 16006 - 15911
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    ||||||||||||||||| ||||  |||||||||| |||||||||||||||||  ||||||||| ||     ||||| |||||||||||||||| ||||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaaaaa----aagattttgtccctgtaatttcatattctt 15911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 5101 - 5027
Alignment:
Q  299 gtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagattctt 374  Q
    |||||||||| ||||||||||||| ||||  |||||||| || |||||||||  ||||||||||||| ||||||||    
T  5101 gtaatattagcgaattccggtttttgtcctagtaaaaaa-aatatttagatttagtccctgtaattttagattctt 5027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 4880 - 4938
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaa 333  Q
    ||||||||| ||||||| || || |||||||||| ||||| ||||||||||||||||||    
T  4880 gggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtccatgtaa 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 219 - 319
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgt-aaaaaagaagatttagattatgtccctgtaatttcagattct 373  Q
    ||||| ||||||||||| ||||| |||| ||||| |||||| |||||||||    || |||||| |||||||||||| | ||||  ||||||||||||||    
T  219 gggtagatatctctttttgtccctgtaaaattagcgaattctggttttagtttccgtaaaaaaaaaagatttagattttctccccataatttcagattct 318  T
Q  374 t 374  Q
    |    
T  319 t 319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 595 - 501
Alignment:
Q  275 gggtaaatatctcttttagtcccagtaatattagtgaattccggttttagtccatgtaaaaaagaagatttagattatgtccctgtaatttcagatt 371  Q
    ||||||||| |||||||  || | | |||||||  |||||||||||||| ||| ||||||| | |||||||||||| ||| |  |||||||||||||    
T  595 gggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgtaaaataaaagatttagattttgttc--gtaatttcagatt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 268 - 181
Alignment:
Q  287 cttttagtcccagtaatattagtgaattccggttttagtcc--atgtaaaaaagaagatttagattatgtccctgtaatttcagattc 372  Q
    |||||||||||  ||||||||| ||||||| ||||||||||  ||  |||||| ||  |||||||| ||||||| |||||||||||||    
T  268 cttttagtccctataatattagcgaattccagttttagtccctattaaaaaaaaaaagtttagattttgtccctataatttcagattc 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University