View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11613_high_14 (Length: 266)
Name: NF11613_high_14
Description: NF11613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11613_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 8631530 - 8631288
Alignment:
| Q |
20 |
agtgaaaactgtgaaattaaaaatgtattcctcttcctccgccgagaaaaaacctaaccctaaaaatgtataccacatcggaggtcttcccgtcgaattt |
119 |
Q |
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| T |
8631530 |
agtgaaaactgtgaaattaaaaatgtattcctcttcctccgccgagaaaaaacctaaccctaaaaatgtataccacatcggaggtcttcccgtcgaattt |
8631431 |
T |
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| Q |
120 |
ccataccaaccctacggttctcaattcgcgtttatgggtcgagttatctcaacccttaatcgagctcagaaagaaggtcactctcacgcgttactggagt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
8631430 |
ccataccaaccctacggttctcaattcgcgtttatgggtcgagttatctcaacccttaatcgagctcagaatgaaggtcactctcacgcgttactggagt |
8631331 |
T |
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| Q |
220 |
cccccaccggttccggtaaatccctttctcttctctgctcctc |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8631330 |
cccccaccggttccggtaaatccctttctcttctctgctcctc |
8631288 |
T |
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