View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11614_high_12 (Length: 547)
Name: NF11614_high_12
Description: NF11614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11614_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 513; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 4 - 532
Target Start/End: Complemental strand, 30415946 - 30415418
Alignment:
| Q |
4 |
ccatgcatgttaaggtttcgaagctcaccgattcgacttgcaaggacagttatgatgggtgtgccattggtgctaggaatctcagccgagactcagaaaa |
103 |
Q |
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| T |
30415946 |
ccatgcatgttaaggtttcgaagctcaccgattcgacttgcaaggacagttatgatgggtgtgccattggtgctaggaatctcagccgagactcagaaaa |
30415847 |
T |
|
| Q |
104 |
tcaatgtagaaatattgaggcacaaggaacaaaatcaaagaacaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaact |
203 |
Q |
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| T |
30415846 |
tcaatgtagaaatattgaggcacaaggaacaaaatcaaagaacaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaact |
30415747 |
T |
|
| Q |
204 |
atatgaagctgaaattgttataaactcccatttaccttgggctaaagagttaattcgaaattggaagtggactttttatgtttgggtgtcattatatgtg |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30415746 |
atatgaagctgaaattgttataaactcccatttaccttgggctaaagagttaattcgaaattggaagtggactttctatgtttgggtgtcattatatgtg |
30415647 |
T |
|
| Q |
304 |
tacattgtgctacttatgcttctcttatattgttacaggccactcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataa |
403 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415646 |
tacatcgtgctacttatgcttctcttatattgttacaggccactcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataa |
30415547 |
T |
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| Q |
404 |
gtgaagaacataatgacttacaagttggagatttatcaggagatgagagtgaggtttctgagttgttgaggaaatggagacttagcagaagcaagagaaa |
503 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415546 |
gtgaagaacataaagacttacaagttggagatttatcaggagatgagagtgaagtttctgagttgttgaggaaatggagacttagcagaagcaagagaaa |
30415447 |
T |
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| Q |
504 |
gacgatcctgacacatggtagtgttggtg |
532 |
Q |
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| T |
30415446 |
gacgatcctgacacatggtagtgttggtg |
30415418 |
T |
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