View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11617_low_14 (Length: 297)
Name: NF11617_low_14
Description: NF11617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11617_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 287
Target Start/End: Original strand, 8437928 - 8438196
Alignment:
| Q |
19 |
cttaacacatggcccacaatgtttaagaccaacatcaagaacaataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctgttg |
118 |
Q |
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| T |
8437928 |
cttaacacatggcccacaatgtttaagaccaacatcaagaacaataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctgttg |
8438027 |
T |
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| Q |
119 |
tgaagttgcactacacctgaatggttatcaccgtagtataacacatcaccaacaagcatatctggaccaatagcttcttcttcatgaattttttctttgc |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8438028 |
tgaagttgcactacacctgaatggttatcaccgtagtataaaacatcaccaacaagcatatctggaccaatagcttcttcttcatgaattttttctttgc |
8438127 |
T |
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| Q |
219 |
tcttgtagaaagtgaagtgtggtactttatcaaccttttctcttttacagagttcttttgttttctctg |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8438128 |
tcttgtagaaagtgaagtgtggtactttatcaaccttttctcttttacagagttcttttgttttctctg |
8438196 |
T |
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