View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11618_low_7 (Length: 373)

Name: NF11618_low_7
Description: NF11618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11618_low_7
NF11618_low_7
[»] chr3 (54 HSPs)
chr3 (1-356)||(37598113-37598469)
chr3 (115-325)||(659539-659750)
chr3 (62-300)||(46431684-46431916)
chr3 (149-349)||(11581434-11581635)
chr3 (144-323)||(21200564-21200744)
chr3 (97-257)||(49841700-49841859)
chr3 (113-203)||(2340772-2340863)
chr3 (132-325)||(44443278-44443472)
chr3 (59-323)||(45289093-45289357)
chr3 (167-322)||(31261051-31261206)
chr3 (95-268)||(23534607-23534781)
chr3 (106-323)||(37227944-37228162)
chr3 (121-264)||(43308638-43308781)
chr3 (144-322)||(40981914-40982092)
chr3 (101-323)||(42026579-42026802)
chr3 (106-230)||(55244386-55244512)
chr3 (106-349)||(34719128-34719364)
chr3 (148-202)||(36820067-36820122)
chr3 (147-249)||(40116557-40116660)
chr3 (60-189)||(46367390-46367519)
chr3 (146-222)||(29475805-29475880)
chr3 (273-349)||(47788891-47788967)
chr3 (146-216)||(39600769-39600840)
chr3 (109-246)||(45493743-45493881)
chr3 (59-202)||(7278596-7278744)
chr3 (106-230)||(37228191-37228316)
chr3 (147-258)||(37351488-37351600)
chr3 (145-199)||(41452827-41452882)
chr3 (82-189)||(41842548-41842654)
chr3 (115-186)||(47804720-47804791)
chr3 (146-255)||(19162675-19162785)
chr3 (97-183)||(36304123-36304209)
chr3 (154-300)||(54365071-54365220)
chr3 (152-189)||(44133938-44133975)
chr3 (59-245)||(21427586-21427769)
chr3 (147-222)||(33755431-33755507)
chr3 (82-210)||(52678875-52679001)
chr3 (106-170)||(6988071-6988136)
chr3 (97-203)||(19676120-19676227)
chr3 (60-167)||(32170578-32170684)
chr3 (147-300)||(42510105-42510257)
chr3 (146-216)||(50960725-50960796)
chr3 (59-133)||(47555334-47555407)
chr3 (59-133)||(51447719-51447792)
chr3 (147-203)||(26990349-26990406)
chr3 (147-203)||(27893225-27893282)
chr3 (144-189)||(33700334-33700379)
chr3 (116-157)||(39535458-39535499)
chr3 (106-179)||(40116386-40116459)
chr3 (149-222)||(41482228-41482304)
chr3 (90-203)||(11284129-11284238)
chr3 (149-189)||(33307265-33307305)
chr3 (117-185)||(41425397-41425465)
chr3 (59-131)||(47233598-47233669)
[»] chr1 (65 HSPs)
chr1 (97-336)||(38868885-38869125)
chr1 (97-254)||(6025690-6025848)
chr1 (116-323)||(40416387-40416595)
chr1 (144-323)||(43423735-43423915)
chr1 (114-264)||(853841-853992)
chr1 (132-324)||(46388391-46388584)
chr1 (97-323)||(3818895-3819122)
chr1 (113-210)||(8203189-8203287)
chr1 (119-268)||(42501179-42501329)
chr1 (59-299)||(8796249-8796489)
chr1 (59-247)||(52073050-52073241)
chr1 (132-264)||(46394895-46395028)
chr1 (118-299)||(15577461-15577640)
chr1 (145-264)||(33560945-33561065)
chr1 (209-336)||(14225981-14226108)
chr1 (62-189)||(30396734-30396860)
chr1 (144-254)||(30834063-30834174)
chr1 (142-259)||(44008659-44008777)
chr1 (59-215)||(41560353-41560509)
chr1 (147-266)||(43898302-43898425)
chr1 (59-337)||(52160245-52160515)
chr1 (147-266)||(50771645-50771765)
chr1 (91-323)||(5338740-5338962)
chr1 (97-239)||(38877382-38877525)
chr1 (134-255)||(12231449-12231571)
chr1 (114-188)||(16822076-16822150)
chr1 (76-170)||(40920547-40920641)
chr1 (144-224)||(8342967-8343048)
chr1 (147-203)||(19969301-19969358)
chr1 (59-192)||(50636230-50636361)
chr1 (118-229)||(6299453-6299565)
chr1 (97-351)||(17815460-17815722)
chr1 (150-300)||(32404618-32404769)
chr1 (114-169)||(52482438-52482493)
chr1 (146-187)||(990546-990587)
chr1 (147-203)||(7083026-7083083)
chr1 (95-203)||(11941617-11941726)
chr1 (147-267)||(28528427-28528548)
chr1 (118-300)||(10569131-10569310)
chr1 (114-186)||(43934386-43934458)
chr1 (218-324)||(4590688-4590795)
chr1 (163-249)||(16943264-16943351)
chr1 (147-349)||(40419629-40419832)
chr1 (129-183)||(10584968-10585022)
chr1 (144-186)||(12135861-12135903)
chr1 (150-259)||(26016517-26016627)
chr1 (97-170)||(109032-109105)
chr1 (117-297)||(13827639-13827810)
chr1 (146-222)||(29577230-29577307)
chr1 (59-258)||(50806750-50806947)
chr1 (59-183)||(4590534-4590657)
chr1 (235-323)||(23791822-23791910)
chr1 (145-189)||(30445262-30445306)
chr1 (190-246)||(49377417-49377473)
chr1 (146-256)||(52561677-52561788)
chr1 (147-189)||(8676954-8676996)
chr1 (97-250)||(9599433-9599587)
chr1 (117-183)||(17233830-17233896)
chr1 (59-133)||(39896770-39896843)
chr1 (147-224)||(51584859-51584937)
chr1 (59-133)||(51602263-51602336)
chr1 (145-249)||(52442615-52442720)
chr1 (97-189)||(7124292-7124384)
chr1 (148-219)||(26299205-26299277)
chr1 (149-189)||(39422018-39422058)
[»] chr4 (86 HSPs)
chr4 (115-267)||(47147445-47147596)
chr4 (61-349)||(54470197-54470485)
chr4 (97-247)||(40018228-40018379)
chr4 (59-249)||(40932926-40933107)
chr4 (91-339)||(38903751-38904002)
chr4 (116-200)||(934489-934574)
chr4 (59-267)||(2589144-2589352)
chr4 (127-323)||(21879222-21879419)
chr4 (90-323)||(42639052-42639286)
chr4 (97-229)||(18966715-18966848)
chr4 (59-203)||(49738552-49738696)
chr4 (97-266)||(55028889-55029064)
chr4 (144-257)||(25967347-25967461)
chr4 (116-249)||(44686629-44686762)
chr4 (113-258)||(50680821-50680967)
chr4 (97-268)||(47372722-47372894)
chr4 (59-321)||(22420719-22420978)
chr4 (106-264)||(25755392-25755550)
chr4 (147-296)||(31961355-31961505)
chr4 (149-313)||(8459126-8459291)
chr4 (148-300)||(26356658-26356811)
chr4 (97-256)||(7681949-7682109)
chr4 (95-183)||(32339716-32339804)
chr4 (127-230)||(42293334-42293438)
chr4 (59-186)||(26024852-26024978)
chr4 (150-296)||(34233116-34233263)
chr4 (114-189)||(51841254-51841329)
chr4 (146-259)||(28351639-28351753)
chr4 (148-249)||(44667335-44667437)
chr4 (134-223)||(45569085-45569175)
chr4 (147-300)||(46372063-46372217)
chr4 (147-203)||(10209172-10209229)
chr4 (60-189)||(37042667-37042795)
chr4 (59-259)||(37488171-37488371)
chr4 (97-259)||(20105557-20105721)
chr4 (97-203)||(8598980-8599087)
chr4 (59-182)||(25574982-25575104)
chr4 (135-245)||(43069895-43070006)
chr4 (115-189)||(6843766-6843840)
chr4 (147-264)||(21945727-21945845)
chr4 (117-230)||(30853452-30853566)
chr4 (190-300)||(31339575-31339684)
chr4 (97-190)||(49686843-49686936)
chr4 (150-190)||(7544615-7544655)
chr4 (125-189)||(20047586-20047650)
chr4 (146-186)||(26025007-26025047)
chr4 (239-323)||(46715554-46715638)
chr4 (59-200)||(2557673-2557815)
chr4 (144-186)||(33710078-33710120)
chr4 (149-249)||(20999091-20999191)
chr4 (147-203)||(31897517-31897574)
chr4 (150-206)||(33225925-33225982)
chr4 (132-185)||(40136698-40136751)
chr4 (115-180)||(41192221-41192286)
chr4 (59-188)||(50967030-50967157)
chr4 (153-237)||(53517632-53517717)
chr4 (146-300)||(53518411-53518563)
chr4 (106-222)||(53540407-53540524)
chr4 (59-222)||(13805267-13805430)
chr4 (146-264)||(21107066-21107186)
chr4 (144-223)||(31403120-31403200)
chr4 (146-221)||(49987526-49987602)
chr4 (117-199)||(21214645-21214728)
chr4 (166-248)||(4136839-4136920)
chr4 (150-267)||(6478775-6478893)
chr4 (241-299)||(17666227-17666285)
chr4 (273-323)||(30853373-30853423)
chr4 (146-188)||(31043224-31043266)
chr4 (146-203)||(45204927-45204985)
chr4 (144-229)||(48033195-48033281)
chr4 (146-203)||(55809078-55809136)
chr4 (212-321)||(2589008-2589117)
chr4 (191-264)||(7682215-7682288)
chr4 (146-187)||(29182605-29182646)
chr4 (144-189)||(41627751-41627795)
chr4 (145-178)||(44047458-44047491)
chr4 (145-182)||(44384988-44385025)
chr4 (145-249)||(44641893-44641998)
chr4 (159-239)||(44860933-44861014)
chr4 (115-168)||(48154904-48154957)
chr4 (172-264)||(51009225-51009318)
chr4 (235-300)||(51550426-51550491)
chr4 (59-180)||(55388213-55388333)
chr4 (59-135)||(21237063-21237138)
chr4 (147-187)||(30621290-30621330)
chr4 (59-179)||(55007907-55008026)
[»] chr5 (42 HSPs)
chr5 (59-258)||(12576862-12577061)
chr5 (106-300)||(14749346-14749541)
chr5 (147-323)||(42199302-42199479)
chr5 (153-323)||(15489587-15489758)
chr5 (147-300)||(2712983-2713137)
chr5 (146-299)||(7359348-7359501)
chr5 (106-263)||(14667847-14668005)
chr5 (59-203)||(38684616-38684760)
chr5 (134-264)||(9917526-9917657)
chr5 (97-222)||(9235166-9235290)
chr5 (146-259)||(43475320-43475433)
chr5 (147-297)||(21952399-21952548)
chr5 (106-203)||(27998577-27998675)
chr5 (144-300)||(4460247-4460403)
chr5 (144-242)||(18698891-18698990)
chr5 (120-183)||(28005692-28005755)
chr5 (147-323)||(31636009-31636186)
chr5 (134-190)||(28186851-28186907)
chr5 (153-230)||(3775162-3775240)
chr5 (97-266)||(6788140-6788310)
chr5 (144-249)||(42199483-42199589)
chr5 (146-222)||(7678595-7678672)
chr5 (116-169)||(36123240-36123293)
chr5 (97-169)||(39128233-39128305)
chr5 (59-138)||(20456975-20457053)
chr5 (59-133)||(2075475-2075548)
chr5 (148-321)||(6889011-6889185)
chr5 (146-203)||(30588583-30588641)
chr5 (147-203)||(10082834-10082891)
chr5 (147-203)||(33667571-33667628)
chr5 (273-349)||(43558043-43558119)
chr5 (145-203)||(2066133-2066192)
chr5 (146-189)||(11675680-11675723)
chr5 (144-183)||(39322152-39322191)
chr5 (146-203)||(28018-28076)
chr5 (144-201)||(5303582-5303640)
chr5 (157-298)||(6859422-6859564)
chr5 (59-133)||(28976861-28976934)
chr5 (147-200)||(29922423-29922477)
chr5 (147-203)||(15369886-15369943)
chr5 (146-249)||(37918128-37918226)
chr5 (149-208)||(3775256-3775316)
[»] chr2 (49 HSPs)
chr2 (97-300)||(43832137-43832341)
chr2 (120-300)||(26784402-26784583)
chr2 (61-249)||(33504313-33504502)
chr2 (59-188)||(8197543-8197671)
chr2 (59-188)||(8202303-8202431)
chr2 (144-265)||(19235070-19235192)
chr2 (97-300)||(9556408-9556612)
chr2 (90-300)||(37481649-37481860)
chr2 (144-300)||(12026091-12026248)
chr2 (97-257)||(38435034-38435195)
chr2 (59-257)||(12141626-12141824)
chr2 (116-264)||(37470191-37470340)
chr2 (127-323)||(42092533-42092730)
chr2 (149-264)||(38860253-38860369)
chr2 (101-189)||(42149703-42149791)
chr2 (97-259)||(18958991-18959154)
chr2 (109-242)||(19855559-19855693)
chr2 (147-300)||(42543274-42543428)
chr2 (60-185)||(19336896-19337020)
chr2 (152-340)||(23714358-23714544)
chr2 (152-340)||(24102030-24102216)
chr2 (117-203)||(33287557-33287644)
chr2 (127-189)||(41779179-41779241)
chr2 (120-189)||(1626346-1626415)
chr2 (59-203)||(12489804-12489948)
chr2 (146-190)||(12443134-12443178)
chr2 (145-189)||(19024329-19024373)
chr2 (144-247)||(29548723-29548827)
chr2 (115-183)||(31254445-31254513)
chr2 (144-230)||(18188861-18188948)
chr2 (106-189)||(23915741-23915824)
chr2 (59-190)||(28960213-28960343)
chr2 (147-216)||(26670891-26670961)
chr2 (147-300)||(26850274-26850428)
chr2 (59-133)||(42549839-42549912)
chr2 (147-264)||(43752036-43752154)
chr2 (148-190)||(45640615-45640657)
chr2 (147-203)||(44437810-44437867)
chr2 (97-169)||(440887-440959)
chr2 (106-186)||(3305857-3305937)
chr2 (145-189)||(11006858-11006902)
chr2 (239-323)||(13240927-13241011)
chr2 (106-170)||(32402670-32402734)
chr2 (117-185)||(33625257-33625325)
chr2 (106-160)||(1303476-1303530)
chr2 (59-133)||(7326162-7326235)
chr2 (149-202)||(7431980-7432034)
chr2 (117-222)||(37452285-37452391)
chr2 (116-216)||(8187232-8187331)
[»] chr7 (54 HSPs)
chr7 (97-300)||(28627972-28628176)
chr7 (59-322)||(12966039-12966296)
chr7 (137-257)||(30144857-30144978)
chr7 (57-230)||(40830311-40830483)
chr7 (114-187)||(19262514-19262587)
chr7 (126-264)||(29653614-29653756)
chr7 (146-264)||(28562454-28562573)
chr7 (147-321)||(38135302-38135476)
chr7 (144-323)||(28858060-28858241)
chr7 (115-188)||(30914559-30914632)
chr7 (97-189)||(40138987-40139079)
chr7 (97-216)||(45601599-45601719)
chr7 (208-351)||(19262585-19262727)
chr7 (146-224)||(24549776-24549855)
chr7 (146-259)||(1569096-1569210)
chr7 (97-249)||(41483580-41483730)
chr7 (144-242)||(41461193-41461295)
chr7 (147-300)||(5335959-5336111)
chr7 (106-203)||(21517428-21517526)
chr7 (113-222)||(22174117-22174227)
chr7 (273-338)||(28020965-28021030)
chr7 (158-222)||(30814771-30814836)
chr7 (146-206)||(43281964-43282025)
chr7 (173-300)||(6420605-6420733)
chr7 (146-185)||(30664723-30664762)
chr7 (235-349)||(39811947-39812061)
chr7 (208-349)||(1740791-1740932)
chr7 (120-165)||(9797768-9797813)
chr7 (235-351)||(30632956-30633069)
chr7 (147-351)||(36514297-36514501)
chr7 (241-338)||(42187471-42187568)
chr7 (150-206)||(44401217-44401274)
chr7 (90-249)||(7220846-7221006)
chr7 (172-247)||(16013375-16013451)
chr7 (59-135)||(22349825-22349900)
chr7 (59-183)||(27893565-27893688)
chr7 (59-167)||(34341397-34341504)
chr7 (107-183)||(41578172-41578248)
chr7 (144-203)||(42103607-42103669)
chr7 (150-245)||(42177110-42177206)
chr7 (176-323)||(47848690-47848838)
chr7 (273-336)||(41948519-41948582)
chr7 (145-203)||(46973728-46973787)
chr7 (59-133)||(21078124-21078197)
chr7 (213-323)||(23720857-23720967)
chr7 (190-300)||(25579210-25579320)
chr7 (127-229)||(36193736-36193838)
chr7 (146-203)||(37976371-37976429)
chr7 (146-183)||(28542032-28542069)
chr7 (117-162)||(40008490-40008535)
chr7 (146-206)||(43282542-43282603)
chr7 (155-187)||(9191928-9191960)
chr7 (172-247)||(14593852-14593928)
chr7 (235-323)||(45558378-45558466)
[»] chr8 (55 HSPs)
chr8 (121-294)||(10079970-10080144)
chr8 (59-294)||(29520695-29520929)
chr8 (129-264)||(38178331-38178467)
chr8 (120-323)||(16917200-16917403)
chr8 (145-230)||(4011192-4011278)
chr8 (106-203)||(23023361-23023459)
chr8 (106-256)||(37826374-37826521)
chr8 (114-257)||(16715355-16715499)
chr8 (146-216)||(35643694-35643765)
chr8 (149-266)||(16351451-16351569)
chr8 (134-230)||(24739924-24740021)
chr8 (108-264)||(38391943-38392100)
chr8 (116-203)||(10108949-10109037)
chr8 (97-300)||(43904704-43904908)
chr8 (147-267)||(7531733-7531854)
chr8 (116-264)||(30198324-30198473)
chr8 (113-201)||(39967554-39967643)
chr8 (117-169)||(26055592-26055644)
chr8 (144-230)||(79136-79223)
chr8 (145-247)||(3079691-3079793)
chr8 (147-296)||(32043633-32043783)
chr8 (147-264)||(32931036-32931154)
chr8 (59-264)||(35362652-35362857)
chr8 (144-203)||(39388918-39388979)
chr8 (104-189)||(44175262-44175348)
chr8 (146-222)||(30783130-30783207)
chr8 (126-183)||(38689813-38689870)
chr8 (150-258)||(45512587-45512696)
chr8 (208-323)||(9695647-9695762)
chr8 (59-203)||(23492171-23492314)
chr8 (146-264)||(5908721-5908840)
chr8 (238-349)||(7046324-7046435)
chr8 (153-203)||(9070124-9070175)
chr8 (146-300)||(30559732-30559887)
chr8 (106-188)||(11733899-11733981)
chr8 (147-216)||(17491743-17491813)
chr8 (145-218)||(43733328-43733402)
chr8 (146-222)||(2216405-2216481)
chr8 (116-189)||(3645237-3645310)
chr8 (147-259)||(16971843-16971956)
chr8 (150-266)||(39953356-39953473)
chr8 (90-189)||(16705898-16705997)
chr8 (117-203)||(16994503-16994590)
chr8 (146-189)||(24399877-24399920)
chr8 (113-243)||(27037731-27037862)
chr8 (146-216)||(28169515-28169586)
chr8 (164-266)||(45331674-45331777)
chr8 (59-189)||(38901821-38901950)
chr8 (128-182)||(39760504-39760558)
chr8 (150-257)||(11130047-11130155)
chr8 (59-200)||(12611640-12611777)
chr8 (60-189)||(16035730-16035858)
chr8 (172-256)||(25985601-25985686)
chr8 (178-266)||(29700349-29700438)
chr8 (144-181)||(38483055-38483092)
[»] scaffold0325 (1 HSPs)
scaffold0325 (151-323)||(11814-11986)
[»] chr6 (26 HSPs)
chr6 (97-228)||(34544-34676)
chr6 (146-300)||(9593796-9593949)
chr6 (59-256)||(31818614-31818811)
chr6 (146-300)||(31831947-31832102)
chr6 (106-239)||(33997592-33997726)
chr6 (146-324)||(43140-43319)
chr6 (117-300)||(24665849-24666034)
chr6 (145-264)||(6906915-6907034)
chr6 (131-264)||(21870139-21870272)
chr6 (147-224)||(10617323-10617401)
chr6 (129-257)||(1747712-1747841)
chr6 (134-189)||(1681597-1681652)
chr6 (97-249)||(8364646-8364799)
chr6 (115-250)||(35199680-35199815)
chr6 (147-268)||(7513478-7513601)
chr6 (159-264)||(4948405-4948511)
chr6 (159-264)||(4955376-4955482)
chr6 (106-160)||(26676381-26676435)
chr6 (106-160)||(26677561-26677615)
chr6 (59-268)||(5053598-5053806)
chr6 (147-202)||(38900-38956)
chr6 (96-187)||(1747983-1748074)
chr6 (273-351)||(14389384-14389461)
chr6 (157-285)||(579472-579601)
chr6 (95-140)||(32080669-32080714)
chr6 (59-135)||(586055-586130)
[»] scaffold0018 (1 HSPs)
scaffold0018 (147-203)||(178509-178566)
[»] scaffold0373 (1 HSPs)
scaffold0373 (115-189)||(2358-2432)
[»] scaffold0015 (1 HSPs)
scaffold0015 (101-216)||(66660-66777)
[»] scaffold0010 (1 HSPs)
scaffold0010 (59-188)||(160326-160454)
[»] scaffold1318 (1 HSPs)
scaffold1318 (59-133)||(538-611)
[»] scaffold0180 (1 HSPs)
scaffold0180 (59-165)||(25445-25550)
[»] scaffold0392 (1 HSPs)
scaffold0392 (68-140)||(6783-6854)
[»] scaffold0279 (1 HSPs)
scaffold0279 (145-189)||(17690-17734)


Alignment Details
Target: chr3 (Bit Score: 325; Significance: 0; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 37598113 - 37598469
Alignment:
Q  1 taaactaatatgggtcggtgacgattctctttaaaagtttcatcagaatggagcccaaaacaacaatcaagctttatcccgctaaatgagggttgactac 100  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37598113 taaactaatatgggtcagtgacgattctttttaaaagtttcatcagaatggagcccaaaacaacaatcaagctttatcccactaaatgagggttgactac 37598212  T
Q  101 atgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctag 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37598213 atgagtcaaatgacgccataatgttctatcatatatcatacccctatccaactcattaatctctagatatatcttaatagtttctcttaagtttttctag 37598312  T
Q  201 gtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37598313 gtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctatacatggccaaaccacctaag 37598412  T
Q  301 gtgagttcccaccatcttttctatgttaagtgctacccaa-tctctctctaaaactc 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37598413 gtgagttcccaccatcttttctatgttaagtgctacccaattctctctctaaaactc 37598469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 115 - 325
Target Start/End: Complemental strand, 659750 - 659539
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcc 213  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||| || ||  ||||| || |||||||||| |||||||||||||| || | ||||    
T  659750 gccataatgttctatcatatataatatccctatccaactcattaatctgtaaatacatcttgatggtttctcttacagtttttctaggtcttcctttgcc 659651  T
Q  214 tctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccacc 313  Q
    ||| ||||||| ||||| || | |||| || ||||| ||||||||| |||| ||  |  ||||||||||||| |||||||||||||| | |||| | ||     
T  659650 tctagtgatttcactactctccctctggtcaactctgcttactacagaatctacaaattttctctctacatgcccaaaccacctaagctaagtttctact 659551  T
Q  314 atcttttctatg 325  Q
    ||||||||||||    
T  659550 atcttttctatg 659539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 300
Target Start/End: Original strand, 46431684 - 46431916
Alignment:
Q  62 aacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatc 161  Q
    ||||| ||||| ||||||| |||| || |||||| | |||||  ||||| ||||||  ||||||  ||||||||| ||| | ||||||||||||||||||    
T  46431684 aacaaccaagccttatcccactaagtg-gggttggcgacatggatcaaacgacgcctcaatgttccatcatatataatatctctatccaactcattaatc 46431782  T
Q  162 tctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacat 260  Q
    ||||||||| | |||||||||||||||| ||||||||||| ||    ||||||||| ||||||| | ||  || ||||| ||||||||| |||||||||     
T  46431783 tctagatcttttttaatagtttctcttatagtttttctagttc----tctgcctctagtgatttgagtatcctccatcttatctactctccttactacag 46431878  T
Q  261 aatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||| ||  | || ||||||||||| ||||||||||||||    
T  46431879 aatctac--agatcctctctacatgcccaaaccacctaag 46431916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 349
Target Start/End: Complemental strand, 11581635 - 11581434
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    ||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||| |||  | ||||| ||||||| |||   || |||||||| ||||    
T  11581635 caactcatttatctatagatctttcttaatagtttctcttatagtttttctaggtcttctcatacctctagtgatttgactcacctacatctgatgtact 11581536  T
Q  248 cttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctct 347  Q
    |||||||||||||||| ||| |   ||||||||||||  ||||||||||||||   |||| | ||||||||||||||  || || |||||| | ||||||    
T  11581535 cttcttactacataattcacatgtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttctattgtaggttctaccctaactctct 11581436  T
Q  348 ct 349  Q
    ||    
T  11581435 ct 11581434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 21200744 - 21200564
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||| | |||||||||||||| || ||| || || ||||||| ||||| || ||| ||||    
T  21200744 ctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactactctccatgtgat 21200645  T
Q  243 ctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||| |||||| || |||| || |   ||||||||||||| ||||||||||||||   |||| |||||||||||||||    
T  21200644 ctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttcta 21200564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 257
Target Start/End: Complemental strand, 49841859 - 49841700
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagttttt 196  Q
    |||||||  |||||| | ||||||||||| ||||||||| ||||   | ||||||||||||||||| ||||||| | ||||||||||||||||  |||||    
T  49841859 ctacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctcttattttttt 49841760  T
Q  197 ctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    || |||| || ||| ||||| || |||| ||||| ||||||||||| |||||| |||||||    
T  49841759 ct-ggtcttcctctacctctagtaatttgactacccttcatctgatttactctccttacta 49841700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 2340772 - 2340863
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||||| |||||||||||||  |||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  2340772 acgccataatgttctatcatatatcattaccctctccgactcattaatctctagatctttcttaatagtttctcttatagttttcctaggtc 2340863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 44443278 - 44443472
Alignment:
Q  132 tatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||| ||||||||||| |||||||||||| | || | || || |  ||||||||||||    
T  44443278 tatatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactac 44443377  T
Q  231 gcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatg 325  Q
     || || |||| ||||||| ||||||||| |||| |      |||||||||||||  ||||| || ||||  ||||| |||||||||||||||||    
T  44443378 cctccaactgagctactctccttactacagaatctaaaagtcttctctctacatgtgcaaactacttaagccgagtttccaccatcttttctatg 44443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 323
Target Start/End: Original strand, 45289093 - 45289357
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||||| | |||||  |||||| | || |||||||| ||||||| | ||||     |||||||||||||    
T  45289093 aacaacaaccaagccttatcccactaagtg-gggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcatta 45289191  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    ||||||| |||| || ||||||||||||||| ||||||  ||| || || |||  |||| || || ||||||  || |||||||||||||||||||||||    
T  45289192 atctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactcttcttacta 45289291  T
Q  258 cataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    || |||| ||     |||||||||| || ||||||||||||||   | || |||||||||||||||    
T  45289292 caaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttcta 45289357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 31261051 - 31261206
Alignment:
Q  167 atctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatcc 265  Q
    |||| |||| ||||||||||||| |||||||||||||| || ||||||||| ||||||| ||||| || ||||||||||||||   |||||||| ||||     
T  31261051 atctttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactac-ctccatctgatctactcacattactacaaaatct 31261149  T
Q  266 acgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttct 322  Q
    || ||  ||||||| ||||| |||||||| ||||| |||||| | | ||||||||||    
T  31261150 acatatcttctctcaacatgcccaaaccatctaagctgagtttctatcatcttttct 31261206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 23534607 - 23534781
Alignment:
Q  95 gactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtt 193  Q
    |||||||||  |||||| ||||||||||||| ||||||| ||||||   |  |||||||||||||||||||  ||| || ||||||||||| ||| | ||    
T  23534607 gactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagtttctgttataatt 23534706  T
Q  194 tttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacg 268  Q
    ||| | |||| || ||| ||||| ||||| ||||||   | ||||||||||||||| |||||||||||| |||||    
T  23534707 tttttgggtcttcctctacctctagtgatctaactatcatccatctgatctactctccttactacataacccacg 23534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 323
Target Start/End: Complemental strand, 37228162 - 37227944
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    ||||| |||||||||||||| || ||| ||||||| |  |||| ||||||||||| ||||  ||| ||||||||||||| ||||  |||||| ||||||     
T  37228162 tcaaacgacgccataatgttctaccatttatcatatctttatctaactcattaatttctaagtctttcttaatagtttcccttatcgtttttataggtct 37228063  T
Q  205 tcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtga 304  Q
    |  ||||||||||||||||| ||||| || | |||  || ||| | |||||||||||||| || |  ||| ||||||||||   ||||||||||||  ||    
T  37228062 ttctctgcctctggtgatttgactaccctccgtctattcaactgtccttactacataatctacatctattttctctacatgcagaaaccacctaagccga 37227963  T
Q  305 gttcccaccatcttttcta 323  Q
    ||| || |||| |||||||    
T  37227962 gtttccgccattttttcta 37227944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 264
Target Start/End: Complemental strand, 43308781 - 43308638
Alignment:
Q  121 atgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctctggt 219  Q
    ||||| |||||||||||||| | |||||||||| |||||||||||||| | |||||||||||||||||  |||||||||||||| |  | || |||| |     
T  43308781 atgttctatcatatatcatatctctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtcttactttgtctctaga 43308682  T
Q  220 gatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    || || ||||| || |||||||||||||||  |||||||| ||||    
T  43308681 gaattgactac-ctccatctgatctactctcattactacaaaatc 43308638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 40982092 - 40981914
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||||||| ||||||| ||||||||| ||||||||||| |||||| |||||||||||||| || | || |||| ||||||| ||||| ||  |||||||    
T  40982092 ctatccaacacattaatatctagatctttcttaatagttactcttatagtttttctaggtcttcctttgtctctagtgatttgactactctatatctgat 40981993  T
Q  243 ctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttct 322  Q
     |||||  || |||| | ||||  |||   ||||||| ||||| |||||  ||||||| |||||| ||||||||||||||    
T  40981992 gtactc-gctgactataaaatctccgtgtcttctctcaacatgcccaaagtacctaagttgagtttccaccatcttttct 40981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 323
Target Start/End: Original strand, 42026579 - 42026802
Alignment:
Q  101 atgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttcta 199  Q
    |||| |||||| ||||||||||||| ||||||||| ||||   ||||| |||||||||||| ||| ||| ||||||||||||||||||| || |||  |     
T  42026579 atgaatcaaataacgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctcttatagctttgatt 42026678  T
Q  200 ggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaa 299  Q
    |||| || ||||||||| | ||| | | ||  || | ||||||||||||| ||||||| |||||| ||     ||||||||||| |  ||||||||||||    
T  42026679 ggtcttcctctgcctctagggatgtgattatcctccgtctgatctactctccttactaaataatctacaagttttctctctacaagctcaaaccacctaa 42026778  T
Q  300 ggtgagttcccaccatcttttcta 323  Q
    |   |||| ||||| |||||||||    
T  42026779 gcctagtttccaccctcttttcta 42026802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 55244512 - 55244386
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta--agtttttctaggtc 203  Q
    ||||| ||| |||||||||| ||||||||| ||||   ||||||||||||||||||||||||| | |||||| | |||||||||  ||||||||||||||    
T  55244512 tcaaacgacaccataatgttctatcatataccatatttctatccaactcattaatctctagatttttcttaagaatttctcttaagagtttttctaggtc 55244413  T
Q  204 atcttctgcctctggtgatttaactac 230  Q
     || |  |||||| ||||||| |||||    
T  55244412 ttccttggcctctagtgatttgactac 55244386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 349
Target Start/End: Original strand, 34719128 - 34719364
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    ||||| || ||||||||| | ||||||||||| || | | |||||| |||||||| ||||||| | || ||||||||||| ||| ||||||||||||||     
T  34719128 tcaaacgaagccataatgctctatcatatatcgtatctcaatccaaatcattaatttctagatttgtcctaatagtttcttttatagtttttctaggtct 34719227  T
Q  205 tcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtga 304  Q
    || ||||||        |||||||||      ||||||||||||| ||||||||| |||| ||   | ||||||||| |||  |||| |||||||| |||    
T  34719228 tcctctgcc--------tttaactaccaactgtctgatctactctccttactacaaaatcaacaggccttctctctatatgttcaaaacacctaagttga 34719319  T
Q  305 gttcccaccatcttttctatgttaagtgctacccaatctctctct 349  Q
     || ||||||||||||||| | || ||||||||| | ||||||||    
T  34719320 ctttccaccatcttttctacgataggtgctaccccaactctctct 34719364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 36820067 - 36820122
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggt 202  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36820067 ccaactcattaatctctagatctttcttaatagtttctcttatagtttttctaggt 36820122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 40116557 - 40116660
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| || | || |||| ||||| | ||||  |||||| ||||||     
T  40116557 tccaactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttcctttggctctagtgatctgactatccttcatatgatctt 40116656  T
Q  246 ctct 249  Q
    ||||    
T  40116657 ctct 40116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 46367390 - 46367519
Alignment:
Q  60 acaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa 159  Q
    ||||||| ||||||||||||   ||| || |||| | |||||||  ||||| |||| ||||||||| |||||||||||||| || ||||||||||||| |    
T  46367390 acaacaaccaagctttatccaattaagtg-gggtaggctacatggatcaaacgacgtcataatgttctatcatatatcatatccttatccaactcattca 46367488  T
Q  160 tctctaga-tctatcttaatagtttctctta 189  Q
    |||||||| | | | ||||||||||||||||    
T  46367489 tctctagatttttttttaatagtttctctta 46367519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 29475880 - 29475805
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||||||||||||||||||||||| |||||||||||||| |  || ||||||||||| || ||||||||| |||||    
T  29475880 atccaactcattaatctctagatctttcttaatagtttct-tatagcttttctaggtcttcctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 47788967 - 47788891
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctctct 349  Q
    |||||||||||||  ||||||||||||| |||||| ||||||||||||||||| ||| || ||||| | ||||||||    
T  47788967 ttctctctacatgcacaaaccacctaagttgagttaccaccatcttttctatgataattgttaccccaactctctct 47788891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 39600769 - 39600840
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    |||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||| || ||| |||||    
T  39600769 atccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctct 39600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 45493743 - 45493881
Alignment:
Q  109 aatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatct 207  Q
    |||| |||||||||| | ||||||||| |||    ||||||| |||||||| |||| ||||| |||||||||||||| ||| ||||| |||||||   |     
T  45493743 aatggcgccataatgctctatcatataccatgtttctatccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtatccc 45493842  T
Q  208 tctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    |||||||||| || ||| ||||| ||| |||||||||||    
T  45493843 tctgcctctgctggtttgactactcttgatctgatctac 45493881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 7278744 - 7278596
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaa-----ct 153  Q
    ||||||||  |||||||||||| |||| || |||| | |||||||  ||||||||||  |||||||| ||| |||||||||| ||| ||||||     |     
T  7278744 aacaacaactaagctttatcccactaagtg-gggtcggctacatggatcaaatgacgttataatgttctataatatatcatatcccgatccaatctaacc 7278646  T
Q  154 cattaatctctagatctatcttaatagtttctctta-agtttttctaggt 202  Q
    |||| |||||||||||| || ||| ||||||||||| |||||||||||||    
T  7278645 cattgatctctagatctttcgtaacagtttctcttatagtttttctaggt 7278596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 37228316 - 37228191
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    ||||| |||||||||||||| || ||| ||||||| |  |||||||||| ||||| ||||  ||| ||||||||||||| ||||  |||||| ||||||     
T  37228316 tcaaacgacgccataatgttctaccatttatcatatctttatccaactcgttaatttctaagtctttcttaatagtttcccttatcgtttttataggtct 37228217  T
Q  205 tcttctgcctctggtgatttaactac 230  Q
    |  ||||||||| ||||||| |||||    
T  37228216 ttctctgcctctagtgatttgactac 37228191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 37351600 - 37351488
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||| ||||||||||||||||||| |||| || |||||||| | |||||||||||||| ||  || ||||| |||||||  || |  | |||||||||||    
T  37351600 tccatctcattaatctctagatctttcttgattgtttctctaatagtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgatcta 37351501  T
Q  246 ctcttcttactac 258  Q
    |||| ||||||||    
T  37351500 ctctccttactac 37351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 41452827 - 41452882
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttcta 199  Q
    |||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||    
T  41452827 tatccaactcattaatctctagatctttcttaatagtttaacttatagtttttcta 41452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 41842548 - 41842654
Alignment:
Q  82 ctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagt 181  Q
    |||||||||| |||||||||||  |||||| || |||||||||| ||||| | | ||||   | ||| |||||||||| ||||||||||||||| |||||    
T  41842548 ctaaatgagg-ttgactacatggatcaaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagt 41842646  T
Q  182 ttctctta 189  Q
    || |||||    
T  41842647 ttttctta 41842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 47804720 - 47804791
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctc 186  Q
    ||||||||||| ||||||||| |||  | |||| ||||||||||||||||| |||| ||||||| |||||||    
T  47804720 gccataatgttctatcatatagcatgtctctattcaactcattaatctctaaatctttcttaatcgtttctc 47804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 19162675 - 19162785
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||||||||||| |||| || ||||||||||||||| || ||| ||||||| || |||  ||||  |||  | |||   |||||||||||||    
T  19162675 atccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactcttttgacctgactctccttcatctgatct 19162774  T
Q  245 actcttcttac 255  Q
    |||||||||||    
T  19162775 actcttcttac 19162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 36304209 - 36304123
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    |||||||  |||||| ||||||||||||  ||||||| | ||||     ||||||||||||||||||||||||| ||||||||||||    
T  36304209 ctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 54365071 - 54365220
Alignment:
Q  154 cattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttct 252  Q
    |||||||||| |  ||| || ||||||||||||||| |||||||||||||| || ||||||||| ||| | | ||||  |||||| ||||||||||| ||    
T  54365071 cattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctcgtggtctgactatccttcatttgatctactctcct 54365170  T
Q  253 tactacataatc--cacgtacattctctctacatggccaaaccacctaag 300  Q
    ||  | | ||||  || |||   |||||||||||| ||||||||||||||    
T  54365171 tataatagaatctacaggtattctctctctacatgcccaaaccacctaag 54365220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 44133938 - 44133975
Alignment:
Q  152 ctcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  44133938 ctcattaatctttagatctatcttaatagtttctctta 44133975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 245
Target Start/End: Original strand, 21427586 - 21427769
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||  ||||||| |||| | ||| |||||||||||  ||||| ||||||| ||||   | ||||| |||| | | |||||||||||||      
T  21427586 aacaacaaccaagtcttatcccactaagt-aggattgactacatggatcaaacgacgccacaatgccttgtcataaatcaaatctctatccaactcat-- 21427682  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||| ||| |||||||||||||||||| | ||||||| |||| || |  |||||| | || |||||||| || |||||||||||    
T  21427683 atctctaggtctttcttaatagtttctcttataatttttcttggtcttccttcgcctcttgcgacttaactac-ctccatctgatcta 21427769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 33755431 - 33755507
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgat 222  Q
    |||||||||||||||||||  | | || ||||||||||||||| |||||||||||||  || ||||||||| |||||    
T  33755431 tccaactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggttttcctctgcctctagtgat 33755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 210
Target Start/End: Original strand, 52678875 - 52679001
Alignment:
Q  82 ctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagt 181  Q
    |||||||||| |||||| ||||  |||||| |||| ||||| |||||||||  ||||||     || ||||||||||| ||||| |||| || |||||||    
T  52678875 ctaaatgagg-ttgactgcatggatcaaattacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagt 52678973  T
Q  182 ttctcttaagtttttctaggtcatcttct 210  Q
    ||||||| |||||| ||||||| ||||||    
T  52678974 ttctctt-agttttcctaggtcttcttct 52679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 6988136 - 6988071
Alignment:
Q  106 tcaaatgacgccataatgtt--atatcatatatcatacccctatccaactcattaatctctagatct 170  Q
    |||||||||||||||||| |  |||||||||| ||||  | ||||||||||||||||||||||||||    
T  6988136 tcaaatgacgccataatgatctatatcatataccatattc-tatccaactcattaatctctagatct 6988071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 19676120 - 19676227
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| ||||||||||| | ||||||| | ||||     |||||||||||||| ||||| || | || ||||||||||||||| ||||||    
T  19676120 ctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctctaaatttttcctaatagtttctcttacagtttt 19676219  T
Q  196 tctaggtc 203  Q
    ||||||||    
T  19676220 tctaggtc 19676227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 32170684 - 32170578
Alignment:
Q  60 acaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa 159  Q
    ||||||| ||||||||||| | |||| || |||| | |||||||  |||||| | | ||||||||||||||||| | ||||   |||||||||| |||||    
T  32170684 acaacaaccaagctttatctcactaagtg-gggtcggctacatggatcaaattatgtcataatgttatatcatagaccatatttctatccaacttattaa 32170586  T
Q  160 tctctaga 167  Q
    ||||||||    
T  32170585 tctctaga 32170578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 42510105 - 42510257
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| || || | |||| || |||| |||||||| | |||||||||||||| || | ||||||| ||||| | ||||  || |||||||||||    
T  42510105 tccaactcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgatcta 42510204  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||| ||||| ||| |||| |  ||  |  |||||||||| ||||||||||||||    
T  42510205 ctctccttaccacaaaatcta--taggtcttctctacatgtccaaaccacctaag 42510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 50960725 - 50960796
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctct 216  Q
    |||||||||||||||||||| | || || |||||||||||||| || |||||||||||| || ||| |||||    
T  50960725 atccaactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttcctctccctct 50960796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 47555334 - 47555407
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| |||| || |||||| |||||||  ||||||||||||||| |||| |||||||    
T  47555334 aacaacaaccaagccttatcccactaagtg-gggttggctacatggatcaaatgacgccatagtgttctatcata 47555407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 51447719 - 51447792
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| ||||||| |||  | |||||||| ||||||||||||||| |||| |||||||    
T  51447719 aacaacaaccaagccttatcccactaaatg-gggccggctacatgaatcaaatgacgccatagtgttctatcata 51447792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 26990406 - 26990349
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||| |||||||||||  |||| ||||||||||| | ||||||||||||||    
T  26990406 tccaactcattgatctctagatccttcttgatagtttctctaatagtttttctaggtc 26990349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 27893282 - 27893225
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||| ||  | |||||||||||||||| ||| ||||||||||    
T  27893282 tccaactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtc 27893225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 33700379 - 33700334
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  33700379 ctatctaactcattaatctctagatatttcttaatagcttctctta 33700334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 39535458 - 39535499
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcatt 157  Q
    |||||||||| |||||||||||||| || |||||||||||||    
T  39535458 ccataatgttctatcatatatcatatccttatccaactcatt 39535499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 40116386 - 40116459
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaata 179  Q
    |||||| ||||||||||||| ||||||| | ||||   |  ||||||||||||||||||| ||||||| |||||    
T  40116386 tcaaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaata 40116459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 41482228 - 41482304
Alignment:
Q  149 caactcattaatctctaga-tctatcttaatagtttctcttaa--gtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||||||||||||| | | ||| || ||||||||||||||||  ||||||||||||| || ||||||||| |||||    
T  41482228 caactcattaatctccaaagtctttcctaatagtttctcttaaaagtttttctaggtcttcctctgcctctagtgat 41482304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 11284238 - 11284129
Alignment:
Q  90 gggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||| |||||||  ||||| || || ||||||||  |||||||| ||||    |||||||||||||||||||||     |||||||||||||||||||    
T  11284238 gggttggctacatggatcaaacgatgcaataatgttcaatcatataccatatttatatccaactcattaatctcta----catcttaatagtttctctta 11284143  T
Q  190 agtttttctaggtc 203  Q
       |||||||||||    
T  11284142 tagttttctaggtc 11284129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 33307305 - 33307265
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||||||||||| ||||||| ||||| ||||    
T  33307305 caactcattaatctctagatctttcttaatggtttccctta 33307265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 41425397 - 41425465
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttct 185  Q
    |||||| || ||||||||| || | ||||||||||||||||||| |||| || | | ||||||||||||    
T  41425397 cataatattctatcatatagcacatccctatccaactcattaatatctaaatgttttttaatagtttct 41425465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 47233598 - 47233669
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatca 131  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||| ||||||||||||||| |||| |||||    
T  47233598 aacaacaaccaagccttatcccactaactg-gggtcggctacatgaatcaaatgacgccatagtgttctatca 47233669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 8e-43; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 38869125 - 38868885
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||| |||||||||||||| ||||||||| ||||   ||||||||| |||||||| |||||||| |||||||| ||||||||| ||||||    
T  38869125 ctacatggatcaaacgacgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctcttatagtttt 38869026  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    |||||||| ||||||||||||  |||||| ||||| || ||||| ||||||||| ||  ||| | |||| ||     ||||||||||||| |||||||||    
T  38869025 tctaggtcttcttctgcctctaatgatttgactaccctccatctaatctactctcctcgctagagaatctactagtgttctctctacatgcccaaaccac 38868926  T
Q  296 ctaaggtgagttcccaccatcttttctatgttaagtgctac 336  Q
    |||||  ||||| ||||||||||||||||| || |||||||    
T  38868925 ctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 6025848 - 6025690
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||||||||||| ||||| ||||| ||| ||||   ||||||||||||||||||||||||||| | ||| |||| ||||||| ||||||    
T  6025848 ctacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagtatctcttatagtttt 6025749  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttctta 254  Q
    |||||||| || ||||||||| ||||||| ||||| || ||||||||||||||| ||||    
T  6025748 tctaggtcttcctctgcctctagtgatttgactaccctacatctgatctactctcctta 6025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 323
Target Start/End: Complemental strand, 40416595 - 40416387
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcct 214  Q
    |||||||||| ||||||| | ||||   | ||||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||||| ||    
T  40416595 ccataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtct 40416496  T
Q  215 ctggtgatttaactacgcttcatctgatctactcttcttactacataatccac-gtacattctctctacatggccaaaccacctaaggtgagttcccacc 313  Q
     ||||||| | ||||  || ||||||||||||||| ||||||||| |||| || || | ||||||||||||| | ||||||||||||    ||| |||||    
T  40416495 ttggtgatctgactatcctgcatctgatctactctccttactacaaaatctacagttc-ttctctctacatgcctaaaccacctaagcctcgtttccacc 40416397  T
Q  314 atcttttcta 323  Q
    ||||||||||    
T  40416396 atcttttcta 40416387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 43423915 - 43423735
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||||||| |||||||||||||| ||||||| || ||||||  | |||||||||||| || ||| ||||| ||||||| |||||  | |||||  |    
T  43423915 ctatccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactactatccatctagt 43423816  T
Q  243 ctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||| |||||||||||||| ||     ||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  43423815 ctactctacttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttcta 43423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 853841 - 853992
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgc 212  Q
    |||||||| ||| |||||||||||||  |||||||||||||| |||||||||||||  ||||||||||||||| || || |||| |||||| || |||||    
T  853841 cgccataacgttctatcatatatcatgtccctatccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgc 853940  T
Q  213 ctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    |||| ||||||| ||||  ||||||||| |  ||||| ||||||||||||||    
T  853941 ctctagtgatttgactaatcttcatctggtaaactctccttactacataatc 853992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 324
Target Start/End: Complemental strand, 46388584 - 46388391
Alignment:
Q  132 tatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||| ||||||||||| |||||||||||| | || | || || |  ||||||||||||    
T  46388584 tatatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactac 46388485  T
Q  231 gcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctat 324  Q
     || || |||| ||||||| ||||||||| |||| ||     |||||||||||||  ||||| |||||||  ||||| ||||||||||||||||    
T  46388484 cctccaactgagctactctccttactacagaatctacaagtcttctctctacatgtgcaaactacctaagccgagtttccaccatcttttctat 46388391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 323
Target Start/End: Original strand, 3818895 - 3819122
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||||| || |||||||||  |||||| | ||||   |||| ||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  3818895 ctacatggatcaaatggcgacataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctcttatagtttt 3818994  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    || ||||| || |||  |||| ||| ||| | ||| || |||||||||||||||  |||||| | |||||||     |||| |||||||| |||||||||    
T  3818995 tcaaggtcttcctctttctctagtggtttgattaccctccatctgatctactctctttactagagaatccacaagtcttctttctacatgcccaaaccac 3819094  T
Q  296 ctaaggtgagttcccaccatcttttcta 323  Q
     ||||   |||| |||||||||||||||    
T  3819095 ttaagtctagttaccaccatcttttcta 3819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 8203189 - 8203287
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttct 210  Q
    ||||||||||||| |||| | ||||||||| |  |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||    
T  8203189 acgccataatgttctatcttctatcatacctccgtccaactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttcttct 8203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 42501329 - 42501179
Alignment:
Q  119 taatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctg 217  Q
    ||||||| ||||||||  ||||   ||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||  || ||| |||||     
T  42501329 taatgttctatcatattccatatttctatccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctcta 42501230  T
Q  218 gtgatttaactacgcttcatctgatctactcttcttactacataatccacg 268  Q
     |||||| ||||| || ||||||| ||||||| ||| ||||| ||||||||    
T  42501229 atgatttgactaccctccatctgaactactctcctttctacagaatccacg 42501179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 299
Target Start/End: Complemental strand, 8796489 - 8796249
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||  | |||| ||||||||||||| ||||||| | ||||   | |||||| ||||||    
T  8796489 aacaacaaccaagccttatcccactaagtg-gggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcatta 8796391  T
Q  159 atctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    || ||||||||| ||||||||||||||||| |||||||| | |||| || ||||||||| ||||| | ||||  || |||| ||| |||||| |||||||    
T  8796390 atatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactatcctccatccgatttactctccttacta 8796291  T
Q  258 cataatccacgtacattctctctacatggccaaaccacctaa 299  Q
    |  || | || |   || |||||||||| |||||||||||||    
T  8796290 cgaaacctacatgtcttatctctacatgtccaaaccacctaa 8796249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 247
Target Start/End: Original strand, 52073050 - 52073241
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||||||||| ||||||| | || || |||| | |||||||  ||||  | |||||||||||| |||||||||||||| ||||||||| |||||||    
T  52073050 aacaacaatcaagccttatcccaccaagtg-gggtcggctacatggatcaatcgccgccataatgttctatcatatatcatagccctatccagctcatta 52073148  T
Q  159 atctctag-atcta---tcttaatagtttctctt-aagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    ||||||||  ||||   || ||||||||||  || ||||||||||||||| || ||||||||| ||||||| ||||| | ||||||||| ||||    
T  52073149 atctctagtctctagattcataatagtttcaattaaagtttttctaggtcttcctctgcctctagtgatttgactactc-tcatctgatttact 52073241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 46395028 - 46394895
Alignment:
Q  132 tatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||| ||||||||||| |||||||||||| | || | || || |  ||||||||||||    
T  46395028 tatatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaactac 46394929  T
Q  231 gcttcatctgatctactcttcttactacataatc 264  Q
     || || |||| ||||||| ||||||||| ||||    
T  46394928 cctccaactgagctactctccttactacagaatc 46394895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 299
Target Start/End: Complemental strand, 15577640 - 15577461
Alignment:
Q  118 ataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    |||||||| ||||| |||||||| | |||||||||||||||||||||| |||  ||||||||||||||||||   ||||| ||| || || ||| |||||    
T  15577640 ataatgttctatcaaatatcatatctctatccaactcattaatctctatatccttcttaatagtttctcttattatttttttagatcttcctctacctct 15577541  T
Q  217 ggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaa 299  Q
     ||||| | ||||   | ||||||||||||||| ||||||||| ||||| | |   |||||| ||||||  ||||||||||||    
T  15577540 agtgatgtgacta---tccatctgatctactctccttactacagaatccgcatgtcttctctatacatgctcaaaccacctaa 15577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 33560945 - 33561065
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatc 243  Q
    ||||||||||  ||||||||||||||  |||||||||||| |||| |||||||||||| | || ||||||||| ||||||| ||||| || ||||  |||    
T  33560945 tatccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcctctagtgatttgactaccctccatcatatc 33561044  T
Q  244 tactcttcttactacataatc 264  Q
    |||||| ||||||||| ||||    
T  33561045 tactctccttactacagaatc 33561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 14225981 - 14226108
Alignment:
Q  209 ctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttc 308  Q
    |||||||| ||||||| |||||||| ||| ||||||||||| ||||||||| |||| ||    || ||||||||||| ||||||||||||||   | ||     
T  14225981 ctgcctctagtgatttgactacgctccatgtgatctactctccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctatttt 14226080  T
Q  309 ccaccatcttttctatgttaagtgctac 336  Q
    ||||||||||||||||| || |||||||    
T  14226081 ccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 30396734 - 30396860
Alignment:
Q  62 aacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatc 161  Q
    ||||| ||||| ||||||| |||| || |||||| ||||| |  ||||| | | |||||||||| ||||||||||| || ||||||||||||||||||||    
T  30396734 aacaaccaagccttatcccactaagtg-gggttggctacacggatcaaacgccaccataatgttctatcatatatcgtatccctatccaactcattaatc 30396832  T
Q  162 tctagatctatcttaatagtttctctta 189  Q
    ||| ||||  |||||| |||||||||||    
T  30396833 tctggatccttcttaacagtttctctta 30396860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 30834063 - 30834174
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| || ||||||||||| || ||| |||||   ||||| |||||  | ||||||||    
T  30834063 ctatccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgactaccttccatctgat 30834162  T
Q  243 ctactcttctta 254  Q
    ||||||| ||||    
T  30834163 ctactctcctta 30834174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 44008777 - 44008659
Alignment:
Q  142 ccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctg 240  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||||| | |||||||||||| || ||||||||| ||||||| ||||| |   || |     
T  44008777 ccctatccaactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctctgcctctagtgatttgactacccgctattta 44008678  T
Q  241 atctactcttcttactaca 259  Q
    ||||||||||| |||||||    
T  44008677 atctactcttcatactaca 44008659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 215
Target Start/End: Complemental strand, 41560509 - 41560353
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||  |||||| ||||||||||||| |||||||   ||||     |||||||||||||    
T  41560509 aacaacaaccaagccttatcccactaagtg-gggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcatta 41560411  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctc 215  Q
    ||||||| || |||| ||||||||||||||| || ||||||||||| |||||| ||||    
T  41560410 atctctaaatgtatcctaatagtttctcttatagcttttctaggtcttcttctacctc 41560353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 43898425 - 43898302
Alignment:
Q  147 tccaactcattaatctctagatctatctt---aatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||||||||||||||||||  ||||   |||||||||||||| |||||||| ||||| |   || ||| ||||||||| ||| | || ||||||||    
T  43898425 tccaactcattaatctctagatccttcttctaaatagtttctcttatagtttttccaggtctttccctacctttggtgatttgactcccctccatctgat 43898326  T
Q  243 ctactcttcttactacataatcca 266  Q
    ||||||| ||||||||||||||||    
T  43898325 ctactctccttactacataatcca 43898302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 337
Target Start/End: Original strand, 52160245 - 52160515
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| || | |||||||| |||||||||| | | ||| |||  ||||||| | ||||||| || ||||||||||||||   ||||| ||||| |||    
T  52160245 aacaacaaccacgttttatcccactaaatgagg-tcggctatatgcatcaaatgtcaccataatattctatcatatatcatatttctatcaaactcgtta 52160343  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    || |||||||||       |||||||||||| |||||||||  ||| || | ||||||| ||||||| ||||| || |||||  ||||||||| ||||||    
T  52160344 atttctagatct-------tagtttctcttatagtttttctctgtcttcatatgcctctagtgatttgactaccctccatctagtctactcttgttacta 52160436  T
Q  258 cataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacc 337  Q
    || |||  ||  |  |||| |||||||| ||||||||||||||  | ||| ||||||| ||||||||| || ||||||||    
T  52160437 caaaatttacaaattttctatctacatgtccaaaccacctaagccgggtttccaccat-ttttctatgctaggtgctacc 52160515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 50771645 - 50771765
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||| |||||||||||| ||  ||||||||||||| |||| |||||||||||||| ||  || ||||| || |||| ||| | || |||||||||||    
T  50771645 tccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtcttcccctacctctagtcatttgactcccctccatctgatcta 50771744  T
Q  246 ctcttcttactacataatcca 266  Q
    |||| ||||||||| ||||||    
T  50771745 ctctccttactacaaaatcca 50771765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 323
Target Start/End: Complemental strand, 5338962 - 5338740
Alignment:
Q  91 ggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta- 189  Q
    ||||| |||||||  |||||| ||||||||||||| ||| ||| |||| |   | ||||||||||||||||||||||||           |||||||||     
T  5338962 ggttggctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatc-----------tttctcttat 5338874  T
Q  190 agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggcca 289  Q
    ||||||||||||||  ||||||||||| ||||| | | ||  || ||||||||||||||| ||||||| |  ||| ||     |||||||| |||| |||    
T  5338873 agtttttctaggtctacttctgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtcttctctctgcatgccca 5338774  T
Q  290 aaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||| | |||| |||||||||||||||    
T  5338773 aaccacctaagctcagtttccaccatcttttcta 5338740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 38877382 - 38877525
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt-aagtttt 195  Q
    |||||||  |||||||||||||||||||| |||| ||||  ||| ||||||||||||| ||||||| |||||||  ||| ||| |||| |||  ||||||    
T  38877382 ctacatggatcaaatgacgccataatgttctatcgtatactatatccctatccaactcgttaatctttagatcttacttgatactttcccttgtagtttt 38877481  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatct 239  Q
     ||||||| || ||||||| | ||||||| ||||| || |||||    
T  38877482 cctaggtcttcctctgcctatagtgatttgactacactccatct 38877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 12231571 - 12231449
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgc 232  Q
    ||||||| | |||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||| ||  || ||  ||| | ||||||| ||||| |    
T  12231571 tatcatatctctatccaactcattaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctccacctttagtgatttgactaccc 12231472  T
Q  233 ttcatctgatctactcttcttac 255  Q
    || || ||||||||||| |||||    
T  12231471 ttaatttgatctactctccttac 12231449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 16822076 - 16822150
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt 188  Q
    ||||||||||||  ||||||||||||| | ||||||| |||||||||||||| |||| ||||| |||||||||||    
T  16822076 cgccataatgttcaatcatatatcatatcgctatccagctcattaatctctacatctttcttactagtttctctt 16822150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 40920547 - 40920641
Alignment:
Q  76 atcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatct 170  Q
    ||||| |||| || |||| |||||||||| ||||| ||| ||||||| || ||||||||| ||||   |||||||||||||||||||||||||||    
T  40920547 atcccactaagtgggggtcgactacatgaatcaaaagacaccataatattctatcatataccatatttctatccaactcattaatctctagatct 40920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 8342967 - 8343048
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||| |||||||||||||| || |||  |||| |||||||    
T  8342967 ctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctctagtgattt 8343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 19969301 - 19969358
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  19969301 tccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtc 19969358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 50636361 - 50636230
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||||||||| |||||||||||| | ||  | ||||||||   |||||||| | ||||||| | ||||||||| ||||    ||||||||||| ||    
T  50636361 aacaacaatcaagccttatcccgctaagt-agaatcgactacattgatcaaatgatgtcataatgctctatcatataccatatttttatccaactcaata 50636263  T
Q  159 atctctagatctatcttaatagtttctcttaagt 192  Q
    |||||||||| |||||||||||||| ||||||||    
T  50636262 atctctagatttatcttaatagttt-tcttaagt 50636230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 6299453 - 6299565
Alignment:
Q  118 ataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    |||||| | |||||||||||||||  ||||| ||||||||||||||||||||| |||||| | ||||||||| | |||||||| |   |||| |||||||    
T  6299453 ataatgctgtatcatatatcatacgtctatcaaactcattaatctctagatctttcttaacaatttctcttataatttttctaagctttcttttgcctct 6299552  T
Q  217 ggtgatttaacta 229  Q
     ||||||| ||||    
T  6299553 agtgatttgacta 6299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 351
Target Start/End: Complemental strand, 17815722 - 17815460
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||| ||| ||| |||| | ||||||||| ||||   ||||| ||||||| |||| |||||||| ||| |||||||||||||| | ||||    
T  17815722 ctacatggatcaaacgacaccaaaatgctctatcatataccatatttctatctaactcatcaatcactagatctttctaaatagtttctcttataatttt 17815623  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc-------ttcttactacataatccacgtacattctctctacatggcc 288  Q
    |||||||| ||   ||||||   |||||| ||||| || |||||||| |||||       |||||||||||||||| |    |  |||||||||||| ||    
T  17815622 tctaggtcttcccttgcctccaatgatttgactactctccatctgatttactcttcttagttcttactacataatctataagccatctctctacatgccc 17815523  T
Q  289 aaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctctctaa 351  Q
    |||||| |||||   |||| ||||||||||||| ||  ||||| |||||  ||||||||||||    
T  17815522 aaaccaactaagcctagtttccaccatcttttccattataagtcctacctcatctctctctaa 17815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 32404618 - 32404769
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    |||||||||||||||| |||| || ||||||||||||||| ||||||| |||||| || ||| ||||| ||||| | ||||  || |||||  |||||||    
T  32404618 aactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatcttctctactc 32404717  T
Q  249 ttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    | ||||||| | |||| ||     ||||||||||||  ||||||||||||||    
T  32404718 tccttactatagaatctacaggtcttctctctacatatccaaaccacctaag 32404769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 52482438 - 52482493
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatc 169  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||||||||||||||    
T  52482438 cgccataatgttccatcatatatcatatccctgtccaactcattaatctctagatc 52482493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 990546 - 990587
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctct 187  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  990546 atccaactcattaatctctagatctatctcaatagtttctct 990587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 7083083 - 7083026
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||| || ||||||||||||||||||| || |||||||||||    
T  7083083 tccaactcattaatctctagttccatcttaatagtttctcttatagcttttctaggtc 7083026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 11941617 - 11941726
Alignment:
Q  95 gactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtt 193  Q
    |||||||||  |||||  ||||||||||||| ||||||| | ||||| || |||||||||| ||||||||| |||| |  |||||| ||||||||  |||    
T  11941617 gactacatggatcaaaatacgccataatgttttatcataaaccatactccgatccaactcaataatctctaaatcttttctaatagcttctcttattgtt 11941716  T
Q  194 tttctaggtc 203  Q
    ||||||||||    
T  11941717 tttctaggtc 11941726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 28528548 - 28528427
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||||||||||||  |||||||||||||| ||| ||||||| |||||| ||  || | ||| | ||||| ||| | || ||| |||||||    
T  28528548 tccaactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttcccctacttctagggatttgactcccctccatttgatcta 28528449  T
Q  246 ctcttcttactacataatccac 267  Q
    || | ||||||||| |||||||    
T  28528448 ctgtccttactacagaatccac 28528427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 10569131 - 10569310
Alignment:
Q  118 ataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctg 217  Q
    |||||||| |||||||||  |||   ||||||| || |||||||||||||||| |||||||||||||| |||   |||| |  ||  || |||||||||     
T  10569131 ataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagtttctttta---ttttttttgtgttcctctgcctcta 10569227  T
Q  218 gtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||||| | ||| || ||||| |||||| || | ||||||| |||| ||     ||||||||||||| ||||||||||||||    
T  10569228 gtgatttgattaccctccatctaatctaccctccgtactacagaatctacaggtcttctctctacatgcccaaaccacctaag 10569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 43934386 - 43934458
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctc 186  Q
    |||||||||||| |||||| ||||||| |||| ||||||| |||||| | ||||||  |||||||||||||||    
T  43934386 cgccataatgttctatcatctatcatatccctttccaactaattaatttgtagatccttcttaatagtttctc 43934458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 4590688 - 4590795
Alignment:
Q  218 gtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaa-ccacctaaggtgagttcccaccatc 316  Q
    ||||||||||||| || ||||| |||||||||  |||||||| |||| ||  |  |||||||| |||| ||||| || |||||| |||||| ||||||||    
T  4590688 gtgatttaactaccctccatctaatctactctctttactacaaaatctacagatcttctctctgcatgcccaaacccccctaagatgagtttccaccatc 4590787  T
Q  317 ttttctat 324  Q
    ||||||||    
T  4590788 ttttctat 4590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 16943351 - 16943264
Alignment:
Q  163 ctagatctatcttaatagtttctcttaa-gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    |||||||| ||||||||||||||||||  | ||| ||||||| |||| ||||||| || |||| || || ||||||||||||||||||    
T  16943351 ctagatctttcttaatagtttctcttatcgctttcctaggtcttcttttgcctctagttatttgaccactcttcatctgatctactct 16943264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 349
Target Start/End: Complemental strand, 40419832 - 40419629
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||  || |||||||||||  || || ||||||| |||  |  || ||||| || || ||||| | || ||||||| |||    
T  40419832 tccaactcatttatctctagatccttcataatagtttcttgtatagattttctatgtctacccctacctctagttatctaactcccctccatctgaacta 40419733  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctct 345  Q
    |||| ||| ||||||||||||| |   ||||||||||||| ||||||||| ||||   |||| | ||||||| |||||   ||||| |||||| | ||||    
T  40419732 ctctccttgctacataatccacatgtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctaccccaactct 40419633  T
Q  346 ctct 349  Q
    ||||    
T  40419632 ctct 40419629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 10584968 - 10585022
Alignment:
Q  129 tcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    |||||||||||| | || |||||||||||||||||| ||||| ||||||||||||    
T  10584968 tcatatatcatatctctgtccaactcattaatctctggatctttcttaatagttt 10585022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 12135903 - 12135861
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctc 186  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  12135903 ctatccaactcattaatctctagatttttcttaatagtttctc 12135861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 26016627 - 26016517
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    |||||||| |||||||||||  || ||||||||||||||| ||||||||||||||  ||  | ||||| ||||| | ||| | |||||||||||||| ||    
T  26016627 aactcatttatctctagatcattcctaatagtttctcttatagtttttctaggtctactcttacctctagtgatctgactccccttcatctgatctaatc 26016528  T
Q  249 ttcttactaca 259  Q
    | ||| |||||    
T  26016527 tccttgctaca 26016517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 109032 - 109105
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatct 170  Q
    |||||||  |||||||||||||||||||| ||||||| ||||||    |||||||||||||||| |||| ||||    
T  109032 ctacatggatcaaatgacgccataatgttctatcatacatcatatatttatccaactcattaatgtctatatct 109105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 13827639 - 13827810
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctaga--tctatcttaatagtttctcttaagtttttctaggtcatcttctgcct 214  Q
    ||||||||| ||||||||| ||||   ||||||||||||||||||||||||  | | |||||||           |||||||||||||| || |||||||    
T  13827639 cataatgttctatcatataccatatttctatccaactcattaatctctagacttttttcttaat-----------agtttttctaggtcttcctctgcct 13827727  T
Q  215 ctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacct 297  Q
    || ||||| | |||| | | ||| ||||||||||| ||||||||| |||| ||     ||||||||||||| |||||||||||    
T  13827728 ctagtgatctgactatgttccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaaccacct 13827810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 29577230 - 29577307
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||  |||||||||||||| || ||| ||||| |||||    
T  29577230 atccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 258
Target Start/End: Complemental strand, 50806947 - 50806750
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| |||| || ||||||| |||| |  ||||||| |||||  |||||||| |||| ||||||| | ||||    |||||||| |||||    
T  50806947 aacaacaaccaagccttattccactaaatg-gggtcggttacatgaatcaaacaacgccatagtgttttatcataaaccatatttttatccaacgcatta 50806849  T
Q  159 atctctagatctatcttaatagtttctcttaa-gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    |||||||  ||  |||| |||||||||||||  ||||||||||||| || ||| | ||| ||||||| ||| | || ||| |||||||| || |||||||    
T  50806848 atctcta--tccttcttgatagtttctcttattgtttttctaggtcttcatctacttctagtgatttgactcccctccatttgatctaccctccttacta 50806751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 4590534 - 4590657
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||| | ||||||| |||| || |||| | |||||||  |||||| || ||||| |||| ||||| ||||||||   ||||||||||||| |    
T  4590534 aacaacaaccaaaccttatcccactaagtg-gggtcggctacatggatcaaattacaccatattgttctatcacatatcatatatctatccaactcatca 4590632  T
Q  159 atctctagatctatcttaatagttt 183  Q
    |||| || |||| ||||||||||||    
T  4590633 atctataaatctttcttaatagttt 4590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 23791822 - 23791910
Alignment:
Q  235 catctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||| |||||| ||||| |||||||||||||| |   |||||||||||||  ||||||||||||| | |||  | |||||||||||||    
T  23791822 catctcatctacccttctaactacataatccacatgtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttcta 23791910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 30445306 - 30445262
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||||||||||||||  |||| |||||||||||||    
T  30445306 tatccaactcattaatctctagatccctcttgatagtttctctta 30445262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 49377473 - 49377417
Alignment:
Q  190 agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    |||||||||||||| || ||||||||| ||||||| ||||| || ||||||||||||    
T  49377473 agtttttctaggtcttcctctgcctctagtgatttgactactctccatctgatctac 49377417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 52561677 - 52561788
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||||| ||||| |||| || ||| ||||||||||| |||||||||| ||| || ||| |||||  | || |||||   || ||||||||||    
T  52561677 atccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctcttctaatctaactctcctccatctgatct 52561776  T
Q  245 actcttcttact 256  Q
    ||||||| ||||    
T  52561777 actcttcgtact 52561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 8676954 - 8676996
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||||||||||||||| |||| | ||||||||||||||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 9599433 - 9599587
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt-aagtttt 195  Q
    |||||||  |||||| ||||||||| ||| ||||||| | |||| |   ||| |||||||||| ||||| || | || ||||||||||||||  ||||||    
T  9599433 ctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctcttgtagtttt 9599532  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactctt 250  Q
    |||||||| || ||| |||||  |||| | |||   || ||||||||||||||||    
T  9599533 tctaggtcttcctctacctcttatgatctgactctcctccatctgatctactctt 9599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 17233830 - 17233896
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    ||||||| | ||||||||| ||||  ||||||||||||| ||||| || ||||| ||||||||||||    
T  17233830 cataatgctctatcatataccatattcctatccaactcaataatcgctggatctttcttaatagttt 17233896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 39896843 - 39896770
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||||||||| |||| ||  | ||||||| | |||||||||| | |||| |||||||||||||||||||||    
T  39896843 aacaacaatcaagccttatgccatttaatgagg-tcgactacatgaattaaattacgccataatgttatatcata 39896770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 51584937 - 51584859
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    |||| ||||||||| || |||||  |||||||||||||||||| |||||||||||||| ||  || ||||| |||||||    
T  51584937 tccagctcattaatgtccagatccctcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgattt 51584859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 51602336 - 51602263
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| |||| || |||||| |||||||  |||||||||||||| ||||| |||||||    
T  51602336 aacaacaaccaagccttatcccactaagtg-gggttggctacatggatcaaatgacgccatgatgttctatcata 51602263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 52442615 - 52442720
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatc 243  Q
    |||||||||||||||  ||||||||  |||| ||||||||||||| | || ||||||||| || ||| ||||| | ||||| ||| |  | |||||||||    
T  52442615 tatccaactcattaacatctagatccttcttgatagtttctcttatatttgttctaggtcttcctctacctctagagatttgactcccttccatctgatc 52442714  T
Q  244 tactct 249  Q
    ||||||    
T  52442715 tactct 52442720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 7124384 - 7124292
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||  ||||| ||| |||||||| | |||| |||| ||||   |||||||| |||||||||  ||||||| ||| ||||||||||||||    
T  7124384 ctacatggatcaaacgacaccataatgctctatcctataccatatttctatccaattcattaatcaatagatctttctcaatagtttctctta 7124292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 26299277 - 26299205
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggt 219  Q
    |||||||||||| ||||| |||| || ||||||||||||||| |||||| ||||||  || ||| ||||||||    
T  26299277 ccaactcattaacctctaaatctttcataatagtttctcttatagttttcctaggttttcctctacctctggt 26299205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 39422018 - 39422058
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||||| |||||||||||| ||||| ||||||||||||    
T  39422018 caactcatttatctctagatctttcttattagtttctctta 39422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 267
Target Start/End: Complemental strand, 47147596 - 47147445
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcc 213  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||  || |||||||||||||| || ||||||    
T  47147596 gccataatgttctatcatatatcatatc--tatccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcc 47147499  T
Q  214 tctggtgatttaactacgcttcatctgatctactcttcttactacataatccac 267  Q
    ||| |||||   ||||| || |||||||| |||||| |||||||||||||||||    
T  47147498 tctagtgatccgactactctccatctgatttactctccttactacataatccac 47147445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 349
Target Start/End: Complemental strand, 54470485 - 54470197
Alignment:
Q  61 caacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaat 160  Q
    |||||| ||||| | ||||| |||| || |||||| |||||||  ||||||||||| |||||| |   ||||||| ||||   |||||||||||||||||    
T  54470485 caacaaccaagcctaatcccactaagtg-gggttggctacatggatcaaatgacgcaataatgctcagtcatataccatatttctatccaactcattaat 54470387  T
Q  161 ctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactaca 259  Q
    ||||||| || | ||||||| |||||||| ||||||||| |||| |||| ||||||| || |||| ||||| || ||| |||| |||||| |||||||||    
T  54470386 ctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgactactctccatttgatttactctccttactaca 54470287  T
Q  260 taatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctctct 349  Q
    ||||  || |   ||||||||||||| ||||||||| ||||   |||| |||||||||||||||   || ||||||||| | ||||||||    
T  54470286 taatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctaccccaactctctct 54470197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 247
Target Start/End: Original strand, 40018228 - 40018379
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||| |||||| ||||||| |||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||| ||||| ||||||    
T  40018228 ctacatggatcaaacgacgccgtaatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaacagtttttcttatagtttt 40018327  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||| ||| |  | ||||||| ||||||| ||||| ||||||||||||||||    
T  40018328 tctaagtctttatttgcctctagtgatttgactacccttcatctgatctact 40018379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 249
Target Start/End: Original strand, 40932926 - 40933107
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||||||||| ||||||| | || || |||| | |||||||  ||||| | |||||||||||| |||||||||||||| |||||||||||||||||    
T  40932926 aacaacaatcaagccttatcccaccaagtg-gggtcggctacatgcatcaaacgccgccataatgttctatcatatatcatatccctatccaactcatta 40933024  T
Q  159 atctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    ||||||||| |   ||||||||||| ||||    ||||||||||| || ||||||||||||||||| ||||  || |||||||||||||||    
T  40933025 atctctagacc---cttaatagtttttctt---gttttctaggtcttcctctgcctctggtgatttgacta--ctccatctgatctactct 40933107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 339
Target Start/End: Original strand, 38903751 - 38904002
Alignment:
Q  91 ggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    ||||| |||||||  ||||| || ||||||||||||| |||||||||||| | ||||| ||||||||||||| ||| ||| ||||||||||||||||||     
T  38903751 ggttggctacatggatcaaacgatgccataatgttatgtcatatatcatatctctatcaaactcattaatctttaggtctttcttaatagtttctcttat 38903850  T
Q  191 gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatc---tgatctactcttcttactacataatccacgtacattctctctacatggc 287  Q
      ||||||||||| || ||||||||| |  |||| ||||| || |  |   ||||||||||| | ||||||| |||| ||     ||||||| |||||      
T  38903851 agttttctaggtcttcatctgcctctagccatttgactaccctcctccgcatgatctactctccatactacaaaatctacaagtcttctctccacatgct 38903950  T
Q  288 caaaccacctaaggtgagttcccaccatcttttctatgttaagtgctaccca 339  Q
    ||||||| |||||  ||||| ||||||||||||||||| |  ||||||||||    
T  38903951 caaaccaactaagccgagtttccaccatcttttctatgatcggtgctaccca 38904002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 934489 - 934574
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctag 200  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||    
T  934489 ccataatgttctatcatatatcataaccctatccaactcattaatctctagaactttcttaatagtttctctaatagtttttctag 934574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 267
Target Start/End: Complemental strand, 2589352 - 2589144
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||||  |||||||| ||||| ||||||||| |||| ||||| | | ||||     |||||||||||||    
T  2589352 aacaacaaccaagccttatcccactaactg-gggttagctacatgaatcaaacgacgccatagtgttctatcaaaaaccatattttcatccaactcatta 2589254  T
Q  159 atctctagatctatcttaatagtttctcttaag-tttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    ||||||||||| ||||| ||||||||||||| | |||||||||||| |  ||| ||||| || |||||||| | || ||| ||||||||||| || ||||    
T  2589253 atctctagatccatcttgatagtttctcttatgctttttctaggtcgtgctctacctctagtaatttaactcccctccatttgatctactctcctaacta 2589154  T
Q  258 cataatccac 267  Q
    || |||||||    
T  2589153 cagaatccac 2589144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 323
Target Start/End: Original strand, 21879222 - 21879419
Alignment:
Q  127 tatcatatatcatacccctatccaactcattaatctctagatctatctt-aatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    |||||||||||||| | |||||||||||||| |||||||||||| |||| |||||||||||||| |||||| |  |||| || ||  |||||||||||||    
T  21879222 tatcatatatcatatctctatccaactcattcatctctagatctttcttgaatagtttctcttatagttttac-gggtcttcctcgacctctggtgattt 21879320  T
Q  225 aactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
     ||||| || ||||| ||||| ||| ||||||| | |||| || |   |||||| | |||| |||||| |||||||  ||||| |||||||||||||||    
T  21879321 cactaccctccatctaatctattctccttactaaagaatctacatgtcttctctatgcatgtccaaactacctaagccgagtttccaccatcttttcta 21879419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 323
Target Start/End: Original strand, 42639052 - 42639286
Alignment:
Q  90 gggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt- 188  Q
    |||||| |||||||| | | | |||||||||||||| ||||| ||| ||||   |||||||||||||||||| |||||||| |||||||||||||||||     
T  42639052 gggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctcttg 42639151  T
Q  189 aagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggcc 288  Q
     ||||||||||| |  || ||| ||||| ||||||| ||| | || ||||| || ||| |  ||||| ||| ||||||      ||||||||||||| ||    
T  42639152 cagtttttctagatattcctctacctctagtgatttgactcccctccatctaatttaccccccttaccacagaatccataagtcttctctctacatgtcc 42639251  T
Q  289 aaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||||    ||| |||||||||||||||    
T  42639252 aaaccacctaagcctggtttccaccatcttttcta 42639286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 18966848 - 18966715
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||| ||||| | |||||||||||| | |||||||||||| | | ||||| |||| |||||| ||||||| |||||||||||||||||| |||| |    
T  18966848 ctacatgaatcaaacggcgccataatgttttgtcatatatcatatctcaatccagctcactaatctgtagatctttcttaatagtttctcttatagttgt 18966749  T
Q  196 tctaggtcatcttctgcctctggtgatttaacta 229  Q
    | |||||| |||||| ||||| |||||| |||||    
T  18966748 tttaggtcttcttctacctctagtgattgaacta 18966715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 49738552 - 49738696
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| ||||||| |||| | |||||||  |||||   |||||||||||| | ||||||||| || |||||||||||||||||    
T  49738552 aacaacaaccaagccttatcccactaaatg-gggtcggctacatggatcaaacaccgccataatgttctgtcatatatcctaaccctatccaactcatta 49738650  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    || ||||||||  |||||||||||| | ||| ||||||||||||||    
T  49738651 atttctagatccttcttaatagtttttattatagtttttctaggtc 49738696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 266
Target Start/End: Complemental strand, 55029064 - 55028889
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatc-----tatcttaatagtttctctta-a 190  Q
    |||||| | |||||||||||||||||||| ||||||||| ||||   ||||| | ||||||||||||||||||     || | ||| ||||||||||| |    
T  55029064 ctacattaatcaaatgacgccataatgttctatcatataacatatttctatctagctcattaatctctagatcattcttaacataacagtttctcttata 55028965  T
Q  191 gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatcca 266  Q
    |||||||||  || || | ||||||| ||||||| |||||  | ||||| ||||||||||||||||||| ||||||    
T  55028964 gtttttctaactcttcctatgcctctagtgatttgactaccatgcatcttatctactcttcttactacagaatcca 55028889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 25967347 - 25967461
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||| || ||||||||||||||| | |||||||||||||||| |||| ||| | ||| || |||| |||| ||||||||||||  |||||||||||    
T  25967347 ctatccaattcgttaatctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctgat 25967446  T
Q  243 ctactcttcttacta 257  Q
    ||||||| |||||||    
T  25967447 ctactctccttacta 25967461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 44686629 - 44686762
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcct 214  Q
    |||||||||| ||||||||||||||    || ||||||| ||||||||||||| | |||| |||||||||  || |||||||| ||||| ||||||||||    
T  44686629 ccataatgttctatcatatatcatattt-tacccaactcgttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcct 44686727  T
Q  215 ctggtgatttaactacgcttcatctgatctactct 249  Q
    || |||||||||||||  | |||||||||||||||    
T  44686728 ctagtgatttaactactatacatctgatctactct 44686762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 50680967 - 50680821
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctg 211  Q
    |||||||||| |  ||||||| | ||||  || ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||  | ||||    
T  50680967 acgccataatatgttatcataaaccatattccgatccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtctacctctg 50680868  T
Q  212 cctctggtgatttaactacgcttcatctgatctactcttcttactac 258  Q
    ||| | ||||| ||||||  ||||||  |||||||||| ||||||||    
T  50680867 cctatagtgatctaactatccttcattggatctactctccttactac 50680821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 268
Target Start/End: Complemental strand, 47372894 - 47372722
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||| ||| |||||||||| ||| ||||| ||||   ||||||||||||||||||||| ||||| | ||| |||||||||||| ||||||    
T  47372894 ctacatggatcaaacgactccataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctcttatagtttt 47372795  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacg 268  Q
       | |||  | ||||||||| ||||||| ||||| || | ||| ||||||||||||| ||||| ||||||||    
T  47372794 ctcaagtctacctctgcctctagtgatttgactaccctccgtctaatctactcttcttcctacaaaatccacg 47372722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 321
Target Start/End: Original strand, 22420719 - 22420978
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || ||||  |||||||   |||||  ||||||||||| | |||||| || |||| | |||||||||||||||    
T  22420719 aacaacaaccaagccttatcccactaagtg-gggtcaactacatagatcaaacaacgccataatgctctatcatttaccatatctctatccaactcatta 22420817  T
Q  159 atctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactac 258  Q
    |||||||||||| |||| ||||||||| |  ||||||||||  || ||   ||||||| ||||||| | ||  || ||||| |||||||||||||| |||    
T  22420818 atctctagatctttctt-atagtttct-tatagtttttctaaatcttcccttgcctctagtgatttgaatattctccatcttatctactcttcttattac 22420915  T
Q  259 ataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttc 321  Q
    | ||||  |  |  ||||||||||||| ||||| ||||||||   || | |||||||||||||    
T  22420916 aaaatcttcagatcttctctctacatgtccaaatcacctaagcctagcttccaccatcttttc 22420978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 106 - 264
Target Start/End: Complemental strand, 25755550 - 25755392
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcat 205  Q
    ||||||||| | |||||||| ||| |||||||||| |||||||||||||||||||| | |  |||  ||||||||||||||||| | ||||||| ||| |    
T  25755550 tcaaatgacactataatgttctatgatatatcatatccctatccaactcattaatccccaagtcttacttaatagtttctcttatggttttctacgtctt 25755451  T
Q  206 cttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    | | |||||||   ||||| |  || || ||| ||||||||||| ||||| ||||||||    
T  25755450 cctttgcctctaacgatttgatcaccctccatttgatctactctacttacaacataatc 25755392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 296
Target Start/End: Original strand, 31961355 - 31961505
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||  |  || ||||| ||||||| ||| | || ||||| ||| |    
T  31961355 tccaactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatttgactcctctccatctaatcca 31961454  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacc 296  Q
    |||| || |||||| |||||||     ||||||||||||| ||||||||||    
T  31961455 ctctcctaactacagaatccacaagtcttctctctacatgcccaaaccacc 31961505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 313
Target Start/End: Original strand, 8459126 - 8459291
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctc-ttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||||| ||||||||||||| | |||||||||||| || || ||||||| |||||| || ||||||| | ||||||| ||||| | |||| | |||||||    
T  8459126 caactctttaatctctagatttttcttaatagtttatcttttagtttttttaggtcttcctctgcctttagtgatttgactactcctcatgtaatctact 8459225  T
Q  248 cttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccacc 313  Q
    || |||| |||| |||| || |   ||||||||| ||| |||||||||| ||| |||||| |||||    
T  8459226 ctccttattacagaatctacatgtcttctctctatatgtccaaaccacccaagttgagtttccacc 8459291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 26356811 - 26356658
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    ||||||||||||||||||||||  || ||| ||||||||||| |||||||||||||| ||  || ||||| ||||||| ||| | || |||| |||||||    
T  26356811 ccaactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctac 26356712  T
Q  247 tcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||| |||||||||  | |||| |   |||||||||  || ||||||||||||||    
T  26356711 tctccttactacaatacccacatgtcttctctctaagtgcccaaaccacctaag 26356658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 7681949 - 7682109
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||| || || |||||||  ||||||||| ||||   ||||| ||||||||||||| ||||| | |||| ||||||||||||| ||||||    
T  7681949 ctacatggatcaaacgatgcaataatgtcctatcatataccatatttctatctaactcattaatctatagatttttcttgatagtttctcttatagtttt 7682048  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttact 256  Q
    || ||||| || ||||||||| ||||| | ||||| || ||||| ||||||| | ||||||    
T  7682049 tccaggtcttcctctgcctctagtgatgtgactaccctccatctaatctactttccttact 7682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 32339804 - 32339716
Alignment:
Q  95 gactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    |||||||||  ||||| ||||||||||| || |||||||||||||| | ||||||||||| ||||||||||| | | ||||||||||||    
T  32339804 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 32339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 42293334 - 42293438
Alignment:
Q  127 tatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattta 225  Q
    ||||||||| ||||   ||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| ||| ||||| | ||||||| |||||||     
T  42293334 tatcatataccatatgtctatctaactcattaatttctagatctttcttaatagtttctcttatagtttttttagttcatcctttgcctctagtgatttg 42293433  T
Q  226 actac 230  Q
    |||||    
T  42293434 actac 42293438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 26024852 - 26024978
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| ||||| | | |||||||  | |||| || |||||||||| ||||||| | |||  | | |||||||||||||    
T  26024852 aacaacaaccaagccttatcccactaagtgagg-tcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcatta 26024950  T
Q  159 atctctagatctatcttaatagtttctc 186  Q
    |||||||||||| |||||||||||||||    
T  26024951 atctctagatctttcttaatagtttctc 26024978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 296
Target Start/End: Original strand, 34233116 - 34233263
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    ||||||||||||||||| ||| | | |||||||||||| | |||||||||||||  || ||||||||| ||||| | || |  || ||||| ||||||||    
T  34233116 aactcattaatctctaggtctttatgaatagtttctctgatagtttttctaggttttcctctgcctctagtgatctgacgatcctccatctcatctactc 34233215  T
Q  249 ttcttactacataatccacgtacattctctctacatggccaaaccacc 296  Q
    | |||||||||||||| || |    |||||||||||| ||||||||||    
T  34233216 tccttactacataatctacatgttctctctctacatgtccaaaccacc 34233263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 51841254 - 51841329
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||| |||||||||||||| ||||||||||||| | ||| |||| |||  ||||||||||||||||||    
T  51841254 cgccataatgttgtatcatatatcatatccctatccaactcttgaatttctaaatccttcttaatagtttctctta 51841329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 28351753 - 28351639
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||| ||||||||| |||| || ||||||||||||||| |||||||||||||| |  ||| ||||| || || | ||||  || ||||||||||    
T  28351753 atccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgatct 28351654  T
Q  245 actcttcttactaca 259  Q
    ||||| |||||||||    
T  28351653 actctccttactaca 28351639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 44667335 - 44667437
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    ||||||| ||||||||||||| | |||| |||||||||  || |||||||| ||||| |||||||||||| ||||||| |||||  | ||||||||||||    
T  44667335 ccaactcgttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcctctagtgatttgactactatacatctgatctac 44667434  T
Q  247 tct 249  Q
    |||    
T  44667435 tct 44667437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 45569085 - 45569175
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatt 223  Q
    ||||||| | |||||||||||||| |||||||||| | |||||||||||||||||| | | |||||||||| || ||||||||| ||||||    
T  45569085 tatcatatctctatccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgatt 45569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 46372217 - 46372063
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||  || ||||||||||||||| ||||||||||||||  |  || ||||| ||||| |  || | ||  |||||||||     
T  46372217 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctggctcccctctatctgatctg 46372118  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||||||| |||| ||||||| |   |||||||||||||  |||||||||||||    
T  46372117 ctcttcttagtacagaatccacatgtcttctctctacatgcacaaaccacctaag 46372063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 10209229 - 10209172
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtc 10209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 37042667 - 37042795
Alignment:
Q  60 acaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa 159  Q
    ||||||| ||||| ||||||| |||| |  |||| | |||||||  ||||| ||| |||||||||| ||||| ||| | ||   |||||||||||| |||    
T  37042667 acaacaaccaagccttatcccactaagtc-gggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataa 37042765  T
Q  160 tctctagatctatcttaatagtttctctta 189  Q
    ||||||||||| ||||||||||||||||||    
T  37042766 tctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 259
Target Start/End: Complemental strand, 37488371 - 37488171
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || ||| || |||||||  |||||| ||||||||||| | ||||||  | ||||     ||| |||| ||||    
T  37488371 aacaacaaccaagccttatcccactaagtg-gggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaacttatta 37488273  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    || ||||||||| |||||||||||||||||| ||||||||||||||  | ||||||| ||||||| | || |   | ||||||||||||||| | |||||    
T  37488272 atttctagatctttcttaatagtttctcttatagtttttctaggtctacctctgcctatggtgatctgacaatcatgcatctgatctactctccctacta 37488173  T
Q  258 ca 259  Q
    ||    
T  37488172 ca 37488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 259
Target Start/End: Original strand, 20105557 - 20105721
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||||||||||||||||  ||||||||| ||||   |  |||||||||| ||||||||||||| ||||| | |||||| ||| ||||||    
T  20105557 ctacatggatcaaatgacgccataatgtcctatcatataccatatttcagtccaactcatcaatctctagatctttcttagtcgtttcttttatagtttt 20105656  T
Q  196 tctaggtcatcttctgcctctggtgatttaact-acgcttcatctgatctactcttcttactaca 259  Q
    ||| | ||  | ||||||||| ||||| | ||| |  |||||||||||||||||  |||||||||    
T  20105657 tctggatctacatctgcctctagtgatctgactaatccttcatctgatctactccccttactaca 20105721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 8598980 - 8599087
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||| ||||| |||||||||||||| ||||| ||| | ||   || || ||||||||||  | ||||||| |||||||||||||||||| ||||||    
T  8598980 ctacatgaatcaaacgacgccataatgttctatcaaataccttatttctttctaactcattaacatttagatctttcttaatagtttctcttatagtttt 8599079  T
Q  196 tctaggtc 203  Q
    ||||||||    
T  8599080 tctaggtc 8599087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 25575104 - 25574982
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| ||||||| ||  || |||||||  |||||| || ||| |||||| ||||||| | ||||   | |||||||||||||    
T  25575104 aacaacaaccaagccttatcccactaaatggggtctg-ctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcatta 25575006  T
Q  159 atctctagatctatcttaatagtt 182  Q
    |||||||||||| |||||||||||    
T  25575005 atctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 43069895 - 43070006
Alignment:
Q  135 atcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgct 233  Q
    |||||| | |||||||||| ||||| |||||||||| ||| |||||||||| | | ||||||| || ||| |||||||||||| || |||| ||||| ||    
T  43069895 atcatatctctatccaacttattaaactctagatctttctcaatagtttctttcatagtttttgtaagtcttcttctgcctctagtaatttgactactct 43069994  T
Q  234 tcatctgatcta 245  Q
    |||| |||||||    
T  43069995 tcatgtgatcta 43070006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 6843840 - 6843766
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||||||| ||| ||||| ||||   ||||| ||||||||||||||||||||| |||||||||| |||||||    
T  6843840 gccataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctctta 6843766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 21945727 - 21945845
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||| || | |||| || ||||||||||| | | |||||||||||||| || || |||||| ||||| | ||||  || |||||||||||    
T  21945727 tccaactcattaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctctagtgatgtgactatcctccatctgatcta 21945826  T
Q  246 ctcttcttactacataatc 264  Q
    |||| ||||||||| ||||    
T  21945827 ctctccttactacagaatc 21945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 30853566 - 30853452
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctc 215  Q
    |||||||||  ||| ||| ||||||| |||| |||||||||||||| ||||| | || ||||||||||||||| |||||||||| |||  | | ||||||    
T  30853566 cataatgttcaatcgtatttcatacctctatgcaactcattaatctttagatttttcataatagtttctcttatagtttttctaagtctccctttgcctc 30853467  T
Q  216 tggtgatttaactac 230  Q
    | ||||||| |||||    
T  30853466 ttgtgatttgactac 30853452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 31339684 - 31339575
Alignment:
Q  190 agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggcca 289  Q
    |||||||||||||| || ||||||||| |||||| | |||| |||||| ||||||||| | |||||||||||||| ||     |||||||||||||  ||    
T  31339684 agtttttctaggtcttcctctgcctctagtgattga-ctactcttcatttgatctactatccttactacataatctacaagtcttctctctacatgctca 31339586  T
Q  290 aaccacctaag 300  Q
    |||||||||||    
T  31339585 aaccacctaag 31339575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 49686936 - 49686843
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    |||||||  ||||| ||||||||||| ||  ||||||||||||| ||||||||| |||||||||||| | || | | | |||||||||||||||    
T  49686936 ctacatggttcaaacgacgccataatattccatcatatatcatatccctatccagctcattaatctcaatatatttttcaatagtttctcttaa 49686843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 7544615 - 7544655
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7544615 aactcattaatctctagatctttcttaatagtttctcttaa 7544655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 20047650 - 20047586
Alignment:
Q  125 tatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||| | ||| | |||||||||||||||||||||||||||   ||||||||||||||||    
T  20047650 tatatcatatttgatatctctatccaactcattaatctctagatcttctttaatagtttctctta 20047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 26025007 - 26025047
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctc 186  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  26025007 atccaactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 46715554 - 46715638
Alignment:
Q  239 tgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||| ||| ||||||||||||| |   ||||||||||||| ||| ||||||||||   |||| |||||||||||||||    
T  46715554 tgatctactctccttgctacataatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttcta 46715638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 200
Target Start/End: Original strand, 2557673 - 2557815
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgcca-taatgttatatcatatatcatacccctatccaactcatt 157  Q
    |||||||| ||||| ||||||| ||||||| | |||| |||||||  |||||| || ||| ||||||| ||||||| | ||||   | ||||||||| ||    
T  2557673 aacaacaaccaagccttatcccactaaatg-gagttggctacatggatcaaattacaccaataatgttctatcataaaccatatttcgatccaactcgtt 2557771  T
Q  158 aatctctagatctatcttaatagtttctctta-agtttttctag 200  Q
    |||||  |||||  |||||||||||||||||| |||||||||||    
T  2557772 aatcttcagatccttcttaatagtttctcttacagtttttctag 2557815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 33710120 - 33710078
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctc 186  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  33710120 ctatccaactcattaatctctagatcagtcttaatagtttctc 33710078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 20999191 - 20999091
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    ||||||||||| |||||||||| |||||||||||| | ||| |||||||||||||| || ||||  |||  |||||| | ||| |||| |||||||||||    
T  20999191 caactcattaaactctagatctttcttaatagtttatattatagtttttctaggtcttcctctgtttctaatgattt-agtactcttcttctgatctact 20999093  T
Q  248 ct 249  Q
    ||    
T  20999092 ct 20999091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 31897517 - 31897574
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||| |||||||||||  || ||||||||||||||| ||||||||||||||    
T  31897517 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtc 31897574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 33225925 - 33225982
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatc 206  Q
    ||||| |||||||||| |||| |||||||||||||||||| | |||||||||||||||    
T  33225925 aactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatc 33225982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 40136698 - 40136751
Alignment:
Q  132 tatatcatacccctatccaactcattaatctctagatctatcttaatagtttct 185  Q
    ||||||||| |||||||||||| |||||| ||||||| | ||||||||||||||    
T  40136698 tatatcatatccctatccaacttattaatttctagatttttcttaatagtttct 40136751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 41192286 - 41192221
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatag 180  Q
    ||||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||| ||||    
T  41192286 gccataatgttctaccatataccatatttctatccaactcattaatctctagatctttctttatag 41192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 50967030 - 50967157
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| |||||||||| || |||| ||||| | | |||||||  |||||| ||| |||||| || | ||||||| |||||  |  |||||||||||     
T  50967030 aacaacaaccaagctttattccactaagtgagg-tcggctacatggatcaaattacgacataattttctttcatataccatactgcattccaactcattg 50967128  T
Q  159 atctctagatctatcttaatagtttctctt 188  Q
    |||||||| ||| |||||||||||||||||    
T  50967129 atctctag-tctttcttaatagtttctctt 50967157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 53517717 - 53517632
Alignment:
Q  153 tcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcat 237  Q
    |||||||||||||| ||| | || ||||||||||||| |||||||||| ||| || ||||||||| ||||| | ||||| ||||||    
T  53517717 tcattaatctctagttcttttttgatagtttctcttacagtttttctaagtcttcctctgcctctagtgatctgactacccttcat 53517632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 300
Target Start/End: Original strand, 53518411 - 53518563
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||||| ||||| |||| || || |||||| ||| | |||||||||||| | || ||| |||||  |||||| |||   || ||||||||||    
T  53518411 atccaactcattaacctctaaatctttcctattagtttttctcatagtttttctaggccttcctctacctcttctgatttgact---ctccatctgatct 53518507  T
Q  245 actcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||||| |||||||  ||||||     ||||||||||||  ||||||||||||||    
T  53518508 actcttcgtactacagcatccacaggtcttctctctacatacccaaaccacctaag 53518563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 53540524 - 53540407
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    |||||| | ||||||||||| ||||||| | ||||    | ||||||||||||||||| |  ||| || ||||||||| ||||| ||||||||||||||     
T  53540524 tcaaattatgccataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtct 53540425  T
Q  205 tcttctgcctctggtgat 222  Q
    || ||||||||| |||||    
T  53540424 tcctctgcctctagtgat 53540407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 13805267 - 13805430
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| |||||  |||||| |||| || |||||| |||||||  |||||| |  |||||||||| ||||||| | ||||   |  ||||||| ||||    
T  13805267 aacaacaaccaagccatatcccactaagtg-gggttggctacatggatcaaattatcccataatgttctatcataaaccatatttccgtccaacttatta 13805365  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgat 222  Q
     |||| | |||| |||| ||||||||||||| |||||||||||||  || ||||||||| |||||    
T  13805366 ctctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctctagtgat 13805430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 21107186 - 21107066
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatc-tgatc 243  Q
    |||||||| ||||||| ||| | || || ||||||||||||||| |||||||||||||| ||  |||| ||  ||||| | ||||| || |||| |||||    
T  21107186 atccaactaattaatcactaaaactttcctaatagtttctcttatagtttttctaggtcttccgctgcatccagtgatctgactaccctccatcttgatc 21107087  T
Q  244 tactcttcttactacataatc 264  Q
     ||||| ||||||||||||||    
T  21107086 cactctccttactacataatc 21107066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 31403120 - 31403200
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatt 223  Q
    |||||||||| |||||||||||||||| || ||||||||| ||||| ||||| ||||| || || || |||||| ||||||    
T  31403120 ctatccaactaattaatctctagatctttcataatagtttttcttatagtttctctagatcttcctccgcctctagtgatt 31403200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 49987602 - 49987526
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtga 221  Q
    ||||| |||||| ||||| |  ||| |||||||||||||||||| |||||||||||||| || ||||||||| ||||    
T  49987602 atccatctcatttatctccaagtctttcttaatagtttctcttatagtttttctaggtcttcctctgcctctagtga 49987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 21214645 - 21214728
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttcta 199  Q
    ||||||| | ||||||| ||||||   || |||||||||||| ||| |||| || |||||||||||||||||| ||||||||||    
T  21214645 cataatgctctatcatacatcatatttctctccaactcattactctatagacctttcttaatagtttctcttatagtttttcta 21214728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 4136839 - 4136920
Alignment:
Q  166 gatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    ||||| ||||||||||||||||| |||||||||| || ||| || |  ||| ||||||| ||||| |||||| ||||||||||    
T  4136839 gatctttcttaatagtttctctt-agtttttctatgttatcctccgtgtctagtgatttgactacccttcatatgatctactc 4136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 267
Target Start/End: Original strand, 6478775 - 6478893
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctcttaa-gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    |||||||| | |||||||||  || ||||||||||||||   |||||||||||||  |  ||  |||||||||| ||||| |  | ||||||||||||||    
T  6478775 aactcatttacctctagatccttcctaatagtttctcttgtcgtttttctaggtctacccctagctctggtgatctaactcccttccatctgatctactc 6478874  T
Q  249 ttcttactacataatccac 267  Q
    | || ||||||||||||||    
T  6478875 tcctaactacataatccac 6478893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 17666227 - 17666285
Alignment:
Q  241 atctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaa 299  Q
    |||||||||||||||||||||||| || |   ||| ||||||||| |||||||||||||    
T  17666227 atctactcttcttactacataatctacatgttttccctctacatgtccaaaccacctaa 17666285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 30853423 - 30853373
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||||| |||||||||||||| |||||| |||| ||||| ||||    
T  30853423 ttctctctacatgcccaaaccacctaagctgagtttccactatcttgtcta 30853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 31043266 - 31043224
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctt 188  Q
    |||||||||||||||||||| |||| || ||||||||||||||    
T  31043266 atccaactcattaatctctaaatctttcctaatagtttctctt 31043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 45204927 - 45204985
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||| ||||| ||||| |||| || ||||||||||||||| ||||||||||||||    
T  45204927 atccaacttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtc 45204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 48033281 - 48033195
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaacta 229  Q
    |||| ||| |||||||| || |||| | |||||||||||||||||| ||||||  || ||| || ||||||||| ||||||||||||    
T  48033281 ctatacaaatcattaatttccagatatttcttaatagtttctcttatagttttcttaagtcttcctctgcctctagtgatttaacta 48033195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 55809078 - 55809136
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||| ||||| |||| || ||| ||||||||||| ||||||||||||||    
T  55809078 atccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaggtc 55809136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 2589117 - 2589008
Alignment:
Q  212 cctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttccca 311  Q
    ||||| || |||||||| | || ||||||||||||||| || |||||| |||||||     ||||||||||||| | ||||||||||||   |||| | |    
T  2589117 cctctagtaatttaactcccctccatctgatctactctcctaactacagaatccacaagttttctctctacatgcctaaaccacctaagtctagtttcta 2589018  T
Q  312 ccatcttttc 321  Q
    ||||||||||    
T  2589017 ccatcttttc 2589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 7682215 - 7682288
Alignment:
Q  191 gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    ||||||||||||| || ||||||||| || || | | ||| |||||||| ||||||| | ||||||||||||||    
T  7682215 gtttttctaggtcttcctctgcctctagtaatgtgaatactcttcatcttatctactttccttactacataatc 7682288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 29182646 - 29182605
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctct 187  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  29182646 atccaactcattaatctctagatacttcttaatagtttctct 29182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 41627751 - 41627795
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||||    
T  41627751 ctatccaaatcattaatctctagatct-tcttaatggtttctctta 41627795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 44047458 - 44047491
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaat 178  Q
    |||||||||||||||||||||||||| |||||||    
T  44047458 tatccaactcattaatctctagatctttcttaat 44047491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 44385025 - 44384988
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtt 182  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  44385025 tatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 44641893 - 44641998
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatc 243  Q
    |||||||||||||||| ||||||| | |||| || ||||||  || |||||||| | ||| ||||||| || | ||||||| ||||| || ||| |||||    
T  44641893 tatccaactcattaatgtctagatttttcttgattgtttctaatatagtttttcgaagtcttcttctgtctttagtgatttgactactctccatttgatc 44641992  T
Q  244 tactct 249  Q
    ||||||    
T  44641993 tactct 44641998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 44861014 - 44860933
Alignment:
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatct 239  Q
    |||||||||||| || |||||||||| |||| |||||||| ||||| || | ||||||| ||| ||| |||||||| |||||    
T  44861014 atctctagatctttcataatagtttcccttatagtttttcaaggtcttcctttgcctctagtgttttgactacgctccatct 44860933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 48154904 - 48154957
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagat 168  Q
    ||||||||||| | |||||||||||    |||||||||||||||||||||||||    
T  48154904 gccataatgttctgtcatatatcatgtttctatccaactcattaatctctagat 48154957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 51009225 - 51009318
Alignment:
Q  172 tcttaatagtttctcttaa-gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    ||||||||||||| ||||| |||||||| |||| || ||  | ||| ||||||||||||| || ||||| ||| |||||  |||||||||||||    
T  51009225 tcttaatagtttcccttaaagtttttctcggtcttcctccacgtctagtgatttaactaccctccatcttatcaactctcattactacataatc 51009318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 51550426 - 51550491
Alignment:
Q  235 catctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||||||| ||||| ||| ||| | ||||||| ||  ||||||||||||| ||||||||||||||    
T  51550426 catctgatcaactctccttgctagagaatccacatatcttctctctacatgcccaaaccacctaag 51550491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||| ||| |||||  |||||| || ||| |||||| ||||||| ||||||   | ||| |||||||||    
T  55388213 aacaacaaccaagccttatcccactaagtg-gggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcatta 55388311  T
Q  159 atctctagatctatcttaatag 180  Q
    ||||| | |||| |||||||||    
T  55388312 atctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 21237138 - 21237063
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatata 135  Q
    |||||||| ||| | ||||||| |||| || |||||| |||||||  ||||||||||||||| |||| |||||||||    
T  21237138 aacaacaaccaatccttatcccactaagtg-gggttggctacatgtatcaaatgacgccatagtgttctatcatata 21237063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 30621290 - 30621330
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctct 187  Q
    |||||| |||||||||||| |||| ||||||||||||||||    
T  30621290 tccaacacattaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 55008026 - 55007907
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||  |||||| ||| ||||||| | ||||||| | ||||   |  ||||||||||||    
T  55008026 aacaacaaccaagccttatcccactaagtg-gggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcatta 55007928  T
Q  159 atctctagatctatcttaata 179  Q
    ||||||| |||| ||||||||    
T  55007927 atctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 258
Target Start/End: Original strand, 12576862 - 12577061
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||||||||||| |||| || |||| | |||||||  | ||||||| |||||||| | ||||||||| ||||   |||| ||||||||||    
T  12576862 aacaacaaccaagctttatcccactaattg-gggtcggctacatgtataaaatgacaccataatggtctatcatataccatatttctattcaactcatta 12576960  T
Q  159 atctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||| || ||||||||| |||||   ||||| || ||||||||||||||| |||||||    
T  12576961 atctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctctagtgataggactaccctccatctgatctactctccttacta 12577060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 106 - 300
Target Start/End: Complemental strand, 14749541 - 14749346
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    ||||||||||||||| |||| ||||| | | ||||   ||||||||||| ||||||||||||||  |||| ||||||||||||| ||||||||||||||     
T  14749541 tcaaatgacgccatagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtct 14749442  T
Q  205 tcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    || ||||||| | ||||||| ||| | || ||||||||| ||||| ||||| ||| |||||||     ||||||||||||| |||||||| |||||    
T  14749441 tcctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaag 14749346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 323
Target Start/End: Complemental strand, 42199479 - 42199302
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||| ||||||||| ||| |||||||| ||| | |||||||||||||| |  ||| || || ||||||| ||||| || ||| |||||||    
T  42199479 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatcta 42199380  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    |||| ||||||||| |||| || |   ||||||||||||| ||||||||||||||   |||| |||||||||||||||    
T  42199379 ctctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttcta 42199302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 15489587 - 15489758
Alignment:
Q  153 tcattaatctctagatctatcttaatagtttctcttaa-gtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttc 251  Q
    |||||||||| ||  ||| ||||||||||||||||||  ||||||||||||| || ||||||||| |||||| |||||  || ||||| ||||||||| |    
T  15489587 tcattaatctataagtctttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctcc 15489686  T
Q  252 ttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||| |||| |||| ||  |  ||||||||||||| |||||||| ||||| |||||| | |||||||||||||    
T  15489687 ttaatacaaaatctacaaatcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttcta 15489758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 2713137 - 2712983
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||| ||  ||| |||| ||||||| |||   || |||||||||||    
T  2713137 tccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatcta 2713038  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||| |||  |||| |||||||     ||||||||||||| ||||||||||||||    
T  2713037 ctctccttcatacagaatccacaggtcttctctctacatgcccaaaccacctaag 2712983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 7359348 - 7359501
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctcttaag-tttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||| |||||||||||||| | ||| |||||||||||||| | ||||||||||   || ||||||||| ||||| | ||||  || ||||||||||    
T  7359348 atccaacttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttcctctgcctctagtgatatgactatcctccatctgatct 7359447  T
Q  245 actcttcttactacataatccacgtacattctctctacatggccaaaccacctaa 299  Q
    ||||| ||||||||| |||| || ||  |||||||||||| ||||||||||||||    
T  7359448 actctccttactacagaatctacatatcttctctctacat-gccaaaccacctaa 7359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 263
Target Start/End: Complemental strand, 14668005 - 14667847
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    |||||| || |||||||||| ||||||| | |||||    ||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||       
T  14668005 tcaaattacaccataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctcttatagtttttctaggatt 14667906  T
Q  205 tcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataat 263  Q
    ||  |||||||| ||||| ||||||   | ||||||||||||||| |||||||||||||    
T  14667905 tccgctgcctctagtgatataactataatccatctgatctactctccttactacataat 14667847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 38684760 - 38684616
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| |||||||||| || |||| || ||||  ||||||||| |||||| ||||||||||||| |||||  || ||||   |||||||||| ||||    
T  38684760 aacaacaaccaagctttattccactaagtg-gggtcaactacatgaatcaaataacgccataatgttctatcaagtaccatatttctatccaactaatta 38684662  T
Q  159 atctctagatctatcttaatagtttctctt-aagtttttctaggtc 203  Q
    |||||||||||| |||||| ||||||||||  ||||||||||||||    
T  38684661 atctctagatctttcttaaaagtttctcttgtagtttttctaggtc 38684616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 264
Target Start/End: Original strand, 9917526 - 9917657
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgc 232  Q
    ||||||| | |||||||||||||| ||||||| |||| ||| |||||||||||| | ||||||||||||||||| |||| |||| ||||||| ||||  |    
T  9917526 tatcatatctctatccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcc 9917625  T
Q  233 ttcatctgatctactcttcttactacataatc 264  Q
    | ||||||||| |||||  |||||||| ||||    
T  9917626 tccatctgatcgactctctttactacaaaatc 9917657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 9235290 - 9235166
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagttttt 196  Q
    |||||||  |||||| | ||||||||||| ||||||| | ||||   | ||||| |||||||||||||| |||| ||||||||||||||||| |||||||    
T  9235290 ctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctctt-agttttt 9235192  T
Q  197 ctaggtcatcttctgcctctggtgat 222  Q
    ||||||| || ||||||||| |||||    
T  9235191 ctaggtcttcctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 43475433 - 43475320
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||   ||| | ||| | ||||| | ||||  || |||||||||||    
T  43475433 atccaactcattaatctctggatctttcttaatagtttctcttaagtttttctatgtttactttttcctatagtgatctgactatcctccatctgatcta 43475334  T
Q  246 ctcttcttactaca 259  Q
    |||| |||||||||    
T  43475333 ctctccttactaca 43475320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 297
Target Start/End: Complemental strand, 21952548 - 21952399
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    |||||| ||||||||||||||||  ||| ||||||||||| || ||||||||||||| ||  || ||||| ||||||| ||| | || |||||||||||     
T  21952548 tccaacccattaatctctagatccttctcaatagtttctcata-gtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatctat 21952450  T
Q  247 tcttcttactacataatccac-gtacattctctctacatggccaaaccacct 297  Q
    ||| ||||||| | ||||||| | || ||||||||||||| |||||||||||    
T  21952449 tctccttactatagaatccacaggac-ttctctctacatgtccaaaccacct 21952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 27998675 - 27998577
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||| |||| |||||| || |||||||||||||   |||||| ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  27998675 tcaaacgacgtcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtc 27998577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 300
Target Start/End: Complemental strand, 4460403 - 4460247
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatc 243  Q
    ||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||  || |||   ||| |  |||| ||||| || |||||||||    
T  4460403 ctatccaactcattaatctctaggtctttcttaatagtctcttttaagtttttctaggttttcctctaaatctagcaatttcactaccctccatctgatc 4460304  T
Q  244 tactcttcttactacataatccac-gtacattctctctacatggccaaaccacctaag 300  Q
     ||| | ||||||||| ||||||| || | ||||||| ||||| ||||||||| ||||    
T  4460303 aactttccttactacagaatccacagttc-ttctctccacatgcccaaaccacttaag 4460247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 18698990 - 18698891
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||||||| |||||||||||||| |||| |||  |||||||| |||||||||||||  || ||||||||| ||||||| ||||| || ||||||||    
T  18698990 ctatccaactcactaatctctagatctttcttgatacattctcttatagtttttctaggtattcctctgcctctagtgatttgactactctccatctgat 18698891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 28005755 - 28005692
Alignment:
Q  120 aatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    |||||| |||| ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  28005755 aatgttctatcgtatatcatatccctatcaaactcattaatctctagatctttcttaatagttt 28005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 323
Target Start/End: Original strand, 31636009 - 31636186
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| ||||||| |||  |||| ||||||||||| | ||||||||||| || ||  ||  |||| ||||||| ||| | |  ||||| |||||    
T  31636009 tccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatcta 31636108  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    |||| |||||||||  |||||||    ||||||||||||| ||||||||||||||   |||| | |||||||||||||    
T  31636109 ctctccttactacaacatccacgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttcta 31636186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 28186851 - 28186907
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    ||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||    
T  28186851 tatcatatctctatccaactcattaatctctaaatctttcttaatagtttctcttaa 28186907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 3775162 - 3775240
Alignment:
Q  153 tcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||||| |||||  | |||||||||||| ||||| |||||||||||||| |||||||||||| ||||||| |||||    
T  3775162 tcattaatccctagacttttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatttgactac 3775240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 266
Target Start/End: Complemental strand, 6788310 - 6788140
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||| |||||| |||| |||||||| ||||||| ||||||   |  |||||||||||||| || |  ||| || |||||||| || | | ||||||    
T  6788310 ctacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactcattaatttccaagtctttcctaatagttcctttgatagtttt 6788211  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatcca 266  Q
    |||||||| || ||||||||| ||||| | || |  || |||||| || ||||| ||||||||||||||||    
T  6788210 tctaggtcttcctctgcctctagtgatctgaccatcctccatctggtcgactctccttactacataatcca 6788140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 42199589 - 42199483
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||| | |||||||||||||| |  ||| || || ||||||| ||||| || ||| ||||    
T  42199589 ctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgat 42199490  T
Q  243 ctactct 249  Q
    |||||||    
T  42199489 ctactct 42199483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 7678672 - 7678595
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||| || || ||||||||| |||||    
T  7678672 atccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgat 7678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 36123240 - 36123293
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatc 169  Q
    |||||||||| ||||||||||||||||||||   ||||||||||||||||||||    
T  36123240 ccataatgttctatcatatatcatacccctacataactcattaatctctagatc 36123293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 39128305 - 39128233
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatc 169  Q
    |||||||  ||||| | |||||||||||| |||||||||||| | |||||||||||| | |||||||||||||    
T  39128305 ctacatgtatcaaacggcgccataatgttgtatcatatatcaaatccctatccaactgagtaatctctagatc 39128233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 20457053 - 20456975
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatca 138  Q
    |||||||||||||| ||||||| |||| || |||| | |||||||  |||||||||||||||||||| ||||||| ||||    
T  20457053 aacaacaatcaagccttatcccactaagtg-gggtcggctacatggatcaaatgacgccataatgttctatcatacatca 20456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 2075475 - 2075548
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||||||||| ||||||| |||| || |||||| |||||||| ||||||||||||||| | || |||||||    
T  2075475 aacaacaatcaagccttatcccactaagtg-gggttggctacatgaatcaaatgacgccatagtattctatcata 2075548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 321
Target Start/End: Complemental strand, 6889185 - 6889011
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    |||||| ||||||||||| |||| || ||||||||||||||| |||||||||||| | || ||| ||||  ||| ||| ||||  || ||||| || ||     
T  6889185 ccaactaattaatctctaaatctttcctaatagtttctcttatagtttttctaggccttcctcttcctcaagtggtttgactatcctccatctaatttat 6889086  T
Q  247 tcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttc 321  Q
    | | ||||| |||||||||||     ||||||||||||| ||||||||| ||||   | || |||||||||||||    
T  6889085 tgtccttaccacataatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttc 6889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 30588641 - 30588583
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||| |||||||||||| |||||| | ||||||||| ||||||||||||||    
T  30588641 atccaactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtc 30588583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 10082834 - 10082891
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||||||  | ||| |||||||||||| ||||||||||||||    
T  10082834 tccaactcattaatctctagatccttgttactagtttctcttatagtttttctaggtc 10082891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 33667628 - 33667571
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||||||  ||||||||  |||||||| ||||||||||||||    
T  33667628 tccaactcattaatctctagatccttcttaataacttctcttatagtttttctaggtc 33667571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 43558043 - 43558119
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctctct 349  Q
    ||||||||| ||| |||||||||||||| | |||| ||||||||||||||||  ||  |||||||| | ||||||||    
T  43558043 ttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccctaactctctct 43558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2066192 - 2066133
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||||||||| | ||| |||||||| ||| | ||||||||||||    
T  2066192 tatccaactcattaatctctagatcttttttagtagtttcttttataatttttctaggtc 2066133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 11675723 - 11675680
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||||||||| |||| || |||||||||||||||    
T  11675723 atccaactcattaatctctaaatctgtcctaatagtttctctta 11675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 39322152 - 39322191
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagttt 183  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  39322152 ctatccaactcattaatctttagatctttcttaatagttt 39322191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 28076 - 28018
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||| ||||| ||||| |||| || ||||||||||||||| ||||||||||||||    
T  28076 atccaacttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtc 28018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 5303640 - 5303582
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctagg 201  Q
    |||||||||||||||| ||||| |||| | | |||||||||||||| ||||||||||||    
T  5303640 ctatccaactcattaaactctaaatctttttcaatagtttctcttacagtttttctagg 5303582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 298
Target Start/End: Complemental strand, 6859564 - 6859422
Alignment:
Q  157 taatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttac 255  Q
    |||||| || |||| || ||||||||||||||| |||||||||||||| || ||| ||||| ||| ||| ||||  || ||||| || || ||  |||||    
T  6859564 taatctgtaaatctttcctaatagtttctcttatagtttttctaggtcttcctcttcctctagtggtttgactatcctccatctaatttattccccttac 6859465  T
Q  256 tacataatccacgtacattctctctacatggccaaaccaccta 298  Q
    |||| |||||||     |||||||||| || ||||||||||||    
T  6859464 tacagaatccacaagtcttctctctacgtgtccaaaccaccta 6859422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 28976861 - 28976934
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||| ||||||||||||||| |||| |||||||    
T  28976861 aacaacaaccaagccttatcccactaagtg-gggtcggctacatgaatcaaatgacgccatagtgttctatcata 28976934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 29922477 - 29922423
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctag 200  Q
    |||||||  |||||||||| |||| |||||||||||||||||| |||||||||||    
T  29922477 tccaacttgttaatctctaaatctttcttaatagtttctcttatagtttttctag 29922423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 15369886 - 15369943
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||| |||| ||||| | |||||||||||||||||| | ||||||||||||    
T  15369886 tccaactcatttatctttagatttttcttaatagtttctcttatactttttctaggtc 15369943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 37918226 - 37918128
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||||||||||| |||| ||| || ||||||||||| || |||||||||       || |||||||| |||| ||| | |||||||||||||    
T  37918226 atccaactcattaatctctatatctttctaaacagtttctcttacaggttttctagg------ccttcctctggttatttgactccccttcatctgatct 37918133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 3775256 - 3775316
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatctt 208  Q
    ||||||||||||| ||||  || ||||| |||||||||||| |||||||||||||| ||||    
T  3775256 caactcattaatcgctagtcctttcttagtagtttctcttatagtttttctaggtcttctt 3775316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 43832341 - 43832137
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  ||||||| || ||||||||| ||| ||| |||||| || |||||||||||||||||||||||||  |||||||||||||||||| |||||     
T  43832341 ctacatggatcaaatgccgtcataatgttctataatacatcatatccttatccaactcattaatctctagatccttcttaatagtttctcttatagtttg 43832242  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    | |||||| || ||||| |||  |||||| | ||| || ||||||||||||||| || |||||||||||||| |   |||||| |||||| ||||| |||    
T  43832241 tttaggtcttcctctgcgtctactgatttgattactctccatctgatctactctcctaactacataatccacatgttttctctgtacatgcccaaatcac 43832142  T
Q  296 ctaag 300  Q
    |||||    
T  43832141 ctaag 43832137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 26784402 - 26784583
Alignment:
Q  120 aatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctgg 218  Q
    |||||| ||||||||| ||||   |||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| |  ||||||||| |    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctag 26784501  T
Q  219 tgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||||| ||||| || ||||| |||||| || ||||||||| ||||||| ||  ||||||||| |||  ||||| |||||||    
T  26784502 tgatttgactaccctccatcttatctaccctccttactacaaaatccacatatcttctctctaaatgcacaaacaacctaag 26784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 33504502 - 33504313
Alignment:
Q  61 caacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa- 159  Q
    |||||| ||||| ||||||| |||| || |||| | ||| |||  |||||| ||||||||||||| ||||||||| ||||   | |||||||| |||||     
T  33504502 caacaaccaagccttatcccactaagtg-gggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaa 33504404  T
Q  160 tctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    ||||||||||| |||||||||||||||||| |||||||||||||  |  ||||||||| ||||| | ||||| || |||||||||||||||    
T  33504403 tctctagatctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctgactaccctccatctgatctactct 33504313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 8197543 - 8197671
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| | ||||| | |||||||  ||||| ||||||||||| || ||||||||||||||   |||||||||||||||    
T  8197543 aacaacaaccaagcattatcccactaagt-agggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatta 8197641  T
Q  159 atctctagatctatcttaatagtttctctt 188  Q
    |||| ||||||| |||||||||||||||||    
T  8197642 atctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 8202303 - 8202431
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| | ||||| | |||||||  ||||| ||||||||||| || ||||||||||||||   |||||||||||||||    
T  8202303 aacaacaaccaagcattatcccactaagt-agggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatta 8202401  T
Q  159 atctctagatctatcttaatagtttctctt 188  Q
    |||| ||||||| |||||||||||||||||    
T  8202402 atctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 19235070 - 19235192
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||| || |||  |||| ||||||| ||| | || ||||||||    
T  19235070 ctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctagtgatttgactcccctccatctgat 19235169  T
Q  243 ctactcttcttactacataatcc 265  Q
    |||||||  |||||||| |||||    
T  19235170 ctactctctttactacagaatcc 19235192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 9556408 - 9556612
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| || || ||||||| ||||||| | |||| |   |||||||||||||||| |||||||| |||||||||||| ||||| ||||||    
T  9556408 ctacatgtatcaaattacaccctaatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatcttatagtttt 9556507  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    || ||||| || | ||||||| ||  ||| ||||  || |||||||| |||| ||||||||||| |||| || |   ||||||||||||| | |||||||    
T  9556508 tcaaggtcttcctttgcctctagtagtttgactatcctccatctgatatacttttcttactacagaatctacttgtcttctctctacatgcctaaaccac 9556607  T
Q  296 ctaag 300  Q
    |||||    
T  9556608 ctaag 9556612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 300
Target Start/End: Original strand, 37481649 - 37481860
Alignment:
Q  90 gggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||| ||||| |||| ||||| ||| ||||||| || ||||| ||| ||||    ||||||||||||| ||| |||||||| |||||||||||||||| |    
T  37481649 gggtcgactagatgaatcaaaagacaccataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagtttctctaa 37481748  T
Q  190 -agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggcc 288  Q
     ||||||||| |||| || ||| ||||  ||||| ||||| | || ||||||||||||||| || |||||| ||| |||     |||||||||||||  |    
T  37481749 tagtttttcttggtcttcatctacctccagtgatctaactcccctccatctgatctactctcctaactacaaaattcacaagtcttctctctacatgctc 37481848  T
Q  289 aaaccacctaag 300  Q
    ||||||||||||    
T  37481849 aaaccacctaag 37481860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 300
Target Start/End: Original strand, 12026091 - 12026248
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| || ||||| |||||||| |  || |||||  ||||| | ||||| |  ||||||||    
T  12026091 ctatcaaactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtcttaatccgcctccagtgatgtgactacccaccatctgat 12026190  T
Q  243 ctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||||| |||| |||| |||| ||     |||||||||||||| |||||||||||||    
T  12026191 ctactctccttagtacaaaatctacaggtcttctctctacatggtcaaaccacctaag 12026248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 257
Target Start/End: Complemental strand, 38435195 - 38435034
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt-aagtttt 195  Q
    |||||||  |||||| |||||||||||||  |||||| | || |   | ||||||| ||||||||||||||||| |||||||||||||||||  ||||||    
T  38435195 ctacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaatagtttctcttgtagtttt 38435096  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    ||||||||  | ||||||||| ||||| | ||||  || ||| ||||||||||| |||||||    
T  38435095 tctaggtctacctctgcctctagtgatctgactatcctccatatgatctactctccttacta 38435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 257
Target Start/End: Complemental strand, 12141824 - 12141626
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||||||||| ||| ||| ||||||| |||||| ||||||   |||||| | ||||||||||| ||||||||| ||||     |||||| ||||||    
T  12141824 aacaacaatcaagccttaccccactaaatg-gggttggctacatcgatcaaatcatgccataatgttctatcatataccatatttggatccaagtcatta 12141726  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    |||||||  ||| || |||||||||||| || || ||||||||||| || ||| ||||| || |||| ||||  ||  |||||||||||||| |||||||    
T  12141725 atctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctctacctcttgtaatttgactatcctcaatctgatctactctccttacta 12141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 37470191 - 37470340
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcct 214  Q
    |||||||||| ||||||||  ||||   | ||||||||||||||||||||||||| || ||||||||||||||| |||||||  ||||| || ||| ||     
T  37470191 ccataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctacca 37470290  T
Q  215 ctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    || ||||| | |||||  | ||||| ||||||||| |||| |||||||||    
T  37470291 ctagtgatctgactaccttccatctaatctactctccttaatacataatc 37470340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 323
Target Start/End: Complemental strand, 42092730 - 42092533
Alignment:
Q  127 tatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattta 225  Q
    ||||||||||| || | |||||||||| ||||||||||| |||| | ||||||||||||| || ||||||||||||||  | | |  || | |||| ||     
T  42092730 tatcatatatcgtatcactatccaactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtctacctgtctctatagtgaattg 42092631  T
Q  226 actacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||| || ||||| ||||||||| ||||||||| |||| ||   | ||||||||||||| ||| | |||||||  | |||| | |||||||||||||    
T  42092630 actaccctccatctaatctactctccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttcta 42092533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 264
Target Start/End: Complemental strand, 38860369 - 38860253
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||||||| ||||||||||||| ||||||||||||||||||   |||||| | ||| || ||||||||| || |||| ||||| || ||||| |||||||    
T  38860369 caactcatgaatctctagatctttcttaatagtttctcttatcatttttccaagtcttcgtctgcctctagtaatttgactaccctccatctcatctact 38860270  T
Q  248 cttcttactacataatc 264  Q
    || ||| ||||||||||    
T  38860269 ctccttcctacataatc 38860253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 42149703 - 42149791
Alignment:
Q  101 atgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||| |||||| ||||||||||||| ||||||| | ||||   ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  42149703 atgaatcaaattacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 259
Target Start/End: Complemental strand, 18959154 - 18958991
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| | ||||||||||| ||||||| | ||||     |||||||||||||||||| |  ||| || | ||||||||||||  ||||||    
T  18959154 ctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcattaatctccaagtctttccttatagtttctcttgtagtttt 18959055  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactaca 259  Q
    |||||||| || |||||||||| |||| | ||||  || ||||||||||||||| |||||||||    
T  18959054 tctaggtcttcctctgcctctgatgatctgactatcctccatctgatctactctccttactaca 18958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 242
Target Start/End: Complemental strand, 19855693 - 19855559
Alignment:
Q  109 aatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatct 207  Q
    |||| |||||||||| | ||||||||| |||    ||||||| |||||||| |||| ||||| |||||||||||||| ||| ||||| |||||||| ||     
T  19855693 aatggcgccataatgctctatcatataccatgtttctatccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtcttcc 19855594  T
Q  208 tctgcctctggtgatttaactacgcttcatctgat 242  Q
    |||||||||| || ||| ||||| ||| |||||||    
T  19855593 tctgcctctgctggtttgactactcttgatctgat 19855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 42543428 - 42543274
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||  || ||||||||||||||| ||||||||||||||  |  || ||||| ||||| | ||| | || ||| |||||||    
T  42543428 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgatcta 42543329  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||| || |||||| |||||||     |||||| |||||| ||||||||||||||    
T  42543328 ctctcctaactacagaatccacaggtcttctctgtacatgcccaaaccacctaag 42543274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 19336896 - 19337020
Alignment:
Q  60 acaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa 159  Q
    ||||||| |||||||||||||  ||| || || ||| |||||||  |||||| ||||||||||||| ||||||| | ||||   | ||||||||||||||    
T  19336896 acaacaaccaagctttatcccaataagtg-ggattggctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaa 19336994  T
Q  160 tctctagatctatcttaatagtttct 185  Q
    |||||| |||| |||| |||||||||    
T  19336995 tctctaaatctttctttatagtttct 19337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 340
Target Start/End: Original strand, 23714358 - 23714544
Alignment:
Q  152 ctcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactctt 250  Q
    |||||||||||||||||||   || ||| ||||||||| |||||||||| ||| || ||| | ||| ||||||| ||| | |  ||| |||||||||||     
T  23714358 ctcattaatctctagatct---ttgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctc 23714454  T
Q  251 cttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaa 340  Q
    |||||||||||||||||     ||||||||||||| | |||| || ||||   |||| |||||||||||||||   || |||||||||||    
T  23714455 cttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctacccaa 23714544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 340
Target Start/End: Original strand, 24102030 - 24102216
Alignment:
Q  152 ctcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactctt 250  Q
    |||||||||||||||||||   || ||| ||||||||| |||||||||| ||| || ||| | ||| ||||||| ||| | |  ||| |||||||||||     
T  24102030 ctcattaatctctagatct---ttgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctc 24102126  T
Q  251 cttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaa 340  Q
    |||||||||||||||||     ||||||||||||| | |||| || ||||   |||| |||||||||||||||   || |||||||||||    
T  24102127 cttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctacccaa 24102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 33287644 - 33287557
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||| ||||||| | ||||   | ||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  33287644 cataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtc 33287557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 41779179 - 41779241
Alignment:
Q  127 tatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||| | |||| |||||||||||||||||||||| | |||||| |||||||||    
T  41779179 tatcatatatcatatctctattcaactcattaatctctagatcttttttaataatttctctta 41779241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 1626415 - 1626346
Alignment:
Q  120 aatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||| ||| ||||||||||    ||| |||||||||||||||||||||| ||||||||||||||||||    
T  1626415 aatgttctattatatatcatatttttatacaactcattaatctctagatctttcttaatagtttctctta 1626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 12489804 - 12489948
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || |||| | |||||||| ||||| ||||||| | |||||||||| | | |||  |  | |||||||||||     
T  12489804 aacaacaaccaagccttatcccactaagtg-gggtcggctacatgaatcaaacgacgccaaagtgttatatcaaaaaccatgtctttctccaactcattt 12489902  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||  || |||||||||||| || ||||||||||||||    
T  12489903 atctctagatccttcctaatagtttctcatatagtttttctaggtc 12489948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 12443178 - 12443134
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  12443178 atccaactcattaatctctaaatatatcttaatagtttctcttaa 12443134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 19024373 - 19024329
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||    
T  19024373 tatccaactcattaatctttagatctttcttaatagtttctctta 19024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 29548723 - 29548827
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgat 242  Q
    ||||| ||| |||||||||||| |||| |||||||| ||||||||| |||||||  ||||| || ||||| ||| ||||||| ||||| || ||| ||||    
T  29548723 ctatcaaacacattaatctctaaatctttcttaataatttctcttatagttttttcaggtcttcctctgcttctcgtgatttgactaccctccatttgat 29548822  T
Q  243 ctact 247  Q
    |||||    
T  29548823 ctact 29548827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 31254513 - 31254445
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    ||||||||||| | ||||| ||||||   |||| |||||||||||||||||||||| ||||||||||||    
T  31254513 gccataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 18188948 - 18188861
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||| | |||||||| |||  | | ||||||| ||||||| |||||    
T  18188948 ctatccagctcattaatctctagatctttctgaatagtttctcttataatttttctaagtctccctttgcctctagtgatttgactac 18188861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 23915741 - 23915824
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||| |||||||| |||| ||||||| | ||||   || |||| ||||||||||||||||| | ||||||||||||||||||    
T  23915741 tcaaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctctta 23915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 28960213 - 28960343
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| ||||||| | || |||||||||| ||||| ||| ||||| || | ||||| | | |||| |  | |||||||||||     
T  28960213 aacaacaaccaagccttatcccactaaatg-gagtcgactacatgaatcaaacgacaccatagtgctctatcaaaaaccatatctttctccaactcattt 28960311  T
Q  159 atctctagatctatcttaatagtttctcttaa 190  Q
    |||||||||||  |||||| ||||||||||||    
T  28960312 atctctagatccttcttaacagtttctcttaa 28960343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 26670961 - 26670891
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    ||||||||||||||||||| |||| |||||||||||||| ||| ||||||| |||||| || ||| |||||    
T  26670961 tccaactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctct 26670891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 26850428 - 26850274
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||| ||| |||| || ||||||||||  |||||||| || ||||||||||  |  ||||||| | ||||||| ||||  || |||||||||||    
T  26850428 tccaactcataaatttctaaatatatcttaataacttctcttatagattttctaggtttttctctgcctttagtgatttgactatcctccatctgatcta 26850329  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
     ||| |||||||||||||  |      |||||||||||||||| |||||||||||    
T  26850328 gtctccttactacataatatataggtcttctctctacatggccgaaccacctaag 26850274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 42549839 - 42549912
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||||||||||| |||| || |||||| |||||||| |||||| ||||||| ||||| |||||||    
T  42549839 aacaacaaccaagctttatcccactaagtg-gggttggctacatgaatcaaattacgccatgatgttctatcata 42549912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 43752036 - 43752154
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||| || | |||| || ||||||||||||| | |||||||||||||| || | ||||||  ||||| | | ||  || |||||||||||    
T  43752036 tccaactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttcctatgcctccagtgatctgagtatcctccatctgatcta 43752135  T
Q  246 ctcttcttactacataatc 264  Q
    |||| | ||||||||||||    
T  43752136 ctctccctactacataatc 43752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 45640615 - 45640657
Alignment:
Q  148 ccaactcattaatctctagatctatcttaatagtttctcttaa 190  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  45640615 ccaacttattaatctctagatctttcttaatagtttctcttaa 45640657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 44437810 - 44437867
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||| |||||||||||  ||||||||||||||| || ||||||||||||||    
T  44437810 tccaactcatttatctctagatccttcttaatagtttctcatatagtttttctaggtc 44437867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 440959 - 440887
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatc 169  Q
    |||||||  |||||| ||||||||||||| |||||| |||| || |||| ||||||| |||||||| ||||||    
T  440959 ctacatggatcaaattacgccataatgttgtatcatgtatcgtatccctgtccaacttattaatctatagatc 440887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 3305857 - 3305937
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctc 186  Q
    ||||| |||||||||||||| || | ||||||||  |  |||||||||| ||||||||||||| | |||| ||||||||||    
T  3305857 tcaaacgacgccataatgttctaccgtatatcatttctatatccaactcgttaatctctagatatttctttatagtttctc 3305937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 11006902 - 11006858
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||    
T  11006902 tatccaacccattaatctctaggtctttcttaatagtttctctta 11006858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 13240927 - 13241011
Alignment:
Q  239 tgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||| ||||||| | |||| || |   ||||||||||||| ||||||||||||||   |||| |||||||||||||||    
T  13240927 tgatctactctccttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 32402734 - 32402670
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatct 170  Q
    ||||||||  |||||||||| ||||||||| | ||   |||||||||||||||||||||||||||    
T  32402734 tcaaatgaaaccataatgttctatcatataccttatttctatccaactcattaatctctagatct 32402670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 33625257 - 33625325
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttct 185  Q
    ||||||||| ||||||| | ||||   || |||||||||||||||||||||| | ||||||||||||||    
T  33625257 cataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagtttct 33625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 1303476 - 1303530
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaat 160  Q
    ||||||| ||||||||| || ||| ||||| |||| |||||||||||||||||||    
T  1303476 tcaaatgccgccataatattctataatatagcatatccctatccaactcattaat 1303530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 7326162 - 7326235
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| |||| || |||||| |||||||  ||||||||||||||| |||| |||||||    
T  7326162 aacaacaaccaagccttatcccactaagtg-gggttggctacatggatcaaatgacgccatagtgttctatcata 7326235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 7431980 - 7432034
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggt 202  Q
    |||||||||||||||||||||  |||||||||||||||  | |||||||||||||    
T  7431980 caactcattaatctctagatccttcttaatagtttctccaatagtttttctaggt 7432034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 37452285 - 37452391
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctc 215  Q
    ||||||||| ||||||| | ||||   || |||||||||||||||||||  ||| ||||||||| | |||||| | |||||||||||| || ||| ||||    
T  37452285 cataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttcctcttcctc 37452384  T
Q  216 tggtgat 222  Q
    | |||||    
T  37452385 ttgtgat 37452391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 8187331 - 8187232
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctc 215  Q
    |||||||||| ||| | ||| |||||  |||||| || | |||||||||| |||  |||||||||||||||  ||||||||||||||| || | ||||||    
T  8187331 ccataatgttgtattaaataccatacttctatccgacccgttaatctctaaatcattcttaatagtttctc-aaagtttttctaggtcttcctatgcctc 8187233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 28627972 - 28628176
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| ||||||||||||| ||||||| | || |     |||||||||||||||||||| |||| || ||||||||||||||| ||||||    
T  28627972 ctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagtttt 28628071  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    |||||||| || ||| ||||| ||||||| ||||  || |||| |||||||||| |||||||||||||| ||     |||||| |||||| |||||||||    
T  28628072 tctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctccttactacataatctacaggttttctctttacatgcccaaaccac 28628171  T
Q  296 ctaag 300  Q
    |||||    
T  28628172 ctaag 28628176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 322
Target Start/End: Complemental strand, 12966296 - 12966039
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || || | | |||||||| |||||  | | ||||||| | ||||||||| ||||   |||||||| ||||||    
T  12966296 aacaacaaccaagccttatcccactaagtg-ggatcggctacatgaatcaaacaatggcataatgatttatcatataccatatttctatccaaatcatta 12966198  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    ||||||| || | |||||||||||||||||| ||||||||||||      ||| ||||| ||||||| ||||  |||||  ||||||||||| |||||||    
T  12966197 atctctaaatatttcttaatagtttctcttatagtttttctagg------tcttcctctagtgatttgactagtcttcacttgatctactctccttacta 12966104  T
Q  258 cataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttct 322  Q
    || |||  |||    ||||||||||||| ||||||||||||||   |||| ||||||||||||||    
T  12966103 cagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttct 12966039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 30144978 - 30144857
Alignment:
Q  137 catacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttc 235  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  | ||||||| |||||| | || || |||| ||||||| || || || |    
T  30144978 catatccctatccaactcattaatctctagatctttcttaatagtttctcgaatagtttttataggtcttattttgtctctagtgatttgaccaccctcc 30144879  T
Q  236 atctgatctactcttcttacta 257  Q
    |||||||||||||||| |||||    
T  30144878 atctgatctactcttcgtacta 30144857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 40830483 - 40830311
Alignment:
Q  57 aaaacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcat 156  Q
    |||||||||||||||| ||||||| |||   | |||||| |||||||  ||||| | | || ||||||| |||||||||||||| |  ||| ||||||||    
T  40830483 aaaacaacaatcaagccttatcccactaggag-gggttggctacatggatcaaacgcctccgtaatgttctatcatatatcatatca-tatacaactcat 40830386  T
Q  157 taatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    |||| ||||||||  |||||||||||||||||| || ||||||||||| || |||| |||| ||||||| |||||    
T  40830385 taatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgatttcactac 40830311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 19262514 - 19262587
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctct 187  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||   ||| ||||||||||||    
T  19262514 cgccataatgttctatcatatatcatatccctatccaactcattaatctctagatgcttctaaatagtttctct 19262587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 264
Target Start/End: Original strand, 29653614 - 29653756
Alignment:
Q  126 atatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    |||| ||||||||||   ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| |||| ||||||| ||||   |||||    
T  29653614 atatgatatatcatatttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgattt 29653713  T
Q  225 aactacgcttcatctgatctactct---tcttactacataatc 264  Q
     ||||  || |||| |||| |||||   |||||||||||||||    
T  29653714 gactattctgcatccgatcaactctacatcttactacataatc 29653756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 28562454 - 28562573
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    ||||||||| |||||||||| |||| || ||||||||||||||| | ||||||||||||||| ||| ||||| || || ||||||  ||  |||||||||    
T  28562454 atccaactcgttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctcttgtaatctaactattctctatctgatct 28562553  T
Q  245 actcttcttactacataatc 264  Q
    | ||||||||||||| ||||    
T  28562554 aatcttcttactacaaaatc 28562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 321
Target Start/End: Original strand, 38135302 - 38135476
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||||||||||| |||| | |||||||||||||||| | |||||||||||| || |||||||||  |||| | ||||  || |||||||||||    
T  38135302 tccaactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactatcctccatctgatcta 38135401  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttc 321  Q
     ||| ||||||||| |||| ||     |||| |||||||| ||||||||||||||   | || |||||||||||||    
T  38135402 -tctccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 28858241 - 28858060
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctg-a 241  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||| ||| |  | || || | ||||||| || | ||| |||||| |    
T  28858241 ctatccaacttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtcttactttgtctatagtgatttgacaatgctccatctgaa 28858142  T
Q  242 tctactcttcttactacataatccac-gtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    |||||||||||||||| | ||||||| |  || ||| |||||||| |||||||||||||  |||||| | ||||| |||||||    
T  28858141 tctactcttcttactatagaatccacaggtca-tctttctacatgcccaaaccacctaacttgagtttctaccatgttttcta 28858060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 30914559 - 30914632
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt 188  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||  || | ||||||||||||    
T  30914559 gccataaagttctatcatatatcatatccctatccaactcattaatctctagatccttcatgatagtttctctt 30914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 40138987 - 40139079
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||  |||||||||| |||||| || |||||||| |||||   ||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  40138987 ctacatggatcaaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatagtttctctta 40139079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 45601719 - 45601599
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| || ||||| |||| ||||||| ||||||     ||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  45601719 ctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctcttatagtttt 45601620  T
Q  196 tctaggtcatcttctgcctct 216  Q
    |||||||| || ||| |||||    
T  45601619 tctaggtcttcctctacctct 45601599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 351
Target Start/End: Original strand, 19262585 - 19262727
Alignment:
Q  208 tctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagtt 307  Q
    ||||||||| ||||||| ||||| || ||||||||||||||||||||||||| |||| ||     |||||||||||||  |||||||||||||   ||||    
T  19262585 tctgcctctagtgatttgactacactccatctgatctactcttcttactaca-aatctacaggtcttctctctacatgctcaaaccacctaagccaagtt 19262683  T
Q  308 cccaccatcttttctatgttaagtgctacccaatctctctctaa 351  Q
     | |||||||||||||   || ||||||||| | ||||||||||    
T  19262684 tctaccatcttttctacaataggtgctaccccaactctctctaa 19262727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 24549776 - 24549855
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||| ||  ||||| |||||| ||||| |||||||    
T  24549776 atccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgattt 24549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 1569210 - 1569096
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |  | ||||||||| |  || | ||||  || ||||||||||    
T  1569210 atccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctctagcaatctgactatcctccatctgatct 1569111  T
Q  245 actcttcttactaca 259  Q
    ||||| ||| |||||    
T  1569110 actctcctttctaca 1569096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 41483730 - 41483580
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagttttt 196  Q
    |||||||  ||| ||||| |||||| ||| || ||||||||||| |  |||||||||| ||||| ||||||||| |||||||||||||||||    ||||    
T  41483730 ctacatggatcatatgacaccataaagttctaccatatatcatatctatatccaactcgttaatttctagatctttcttaatagtttctctt--cctttt 41483633  T
Q  197 ctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    ||||||| ||  ||||| ||||||||||  |||| ||  || |||||||||||    
T  41483632 ctaggtcttcccctgcccctggtgatttggctaccctcaatatgatctactct 41483580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 41461295 - 41461193
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctag---gtcatcttctgcctctggtgatttaactacgcttcatct 239  Q
    |||||||||||||||||| |||||||| | |||||||||||||||| ||||||| | |   ||| || ||||||||| ||||||| ||||| ||||||||    
T  41461295 ctatccaactcattaatcactagatctttattaatagtttctcttatagtttttttgggtcgtcctcctctgcctctagtgatttgactactcttcatct 41461196  T
Q  240 gat 242  Q
    |||    
T  41461195 gat 41461193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 5336111 - 5335959
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctac 246  Q
    |||||||||||||||||||||||  |||||||||| |||| | |||||||| ||||  ||  || ||||  ||||||| ||| | || ||||| ||||||    
T  5336111 tccaactcattaatctctagatcattcttaatagtatctcat-agtttttcaaggttttcccctacctcgagtgatttgactcccctccatctaatctac 5336013  T
Q  247 tcttcttactacataatccac-gtacattctctctacatggccaaaccacctaag 300  Q
    ||| || |||||| ||||||| || | ||||||||| ||| ||||||||||||||    
T  5336012 tctcctaactacagaatccacagttc-ttctctctatatgcccaaaccacctaag 5335959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 21517428 - 21517526
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||| ||| ||||||||||||||||| ||||||     |||||||| ||||||||||| || | | |||||||||||||||| ||||||||||||||    
T  21517428 tcaaattacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctcttatagtttttctaggtc 21517526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 22174227 - 22174117
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctg 211  Q
    ||||||||||||| ||||| ||| ||||   ||||| || |||||||||||||||||| | || ||||||||||||| |||||||||| ||  || ||||    
T  22174227 acgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctcttatagtttttctacgttttcctctg 22174128  T
Q  212 cctctggtgat 222  Q
    ||||| |||||    
T  22174127 cctctagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 28021030 - 28020965
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctaccc 338  Q
    ||||||||||||| ||||||||||||||   |||| ||||||||||||||| | ||||||||||||    
T  28021030 ttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctaccc 28020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 30814771 - 30814836
Alignment:
Q  158 aatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||||| |||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgat 30814836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 43282025 - 43281964
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatc 206  Q
    |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||||||||    
T  43282025 atccaactcattaatctctagatcttacttaattgtttctcttacggtttttctaggtcatc 43281964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 6420605 - 6420733
Alignment:
Q  173 cttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtac 271  Q
    ||||||||| ||||||| ||||||| ||||||  | ||||||||| ||||| | ||||   ||||||||||||||||| |||||||||  ||| ||        
T  6420605 cttaatagtatctcttatagtttttataggtctacctctgcctctagtgatctgactatcattcatctgatctactctccttactacagtatctacaagt 6420704  T
Q  272 attctctctacatggccaaaccacctaag 300  Q
     ||||||||||||| ||||||||||||||    
T  6420705 cttctctctacatgcccaaaccacctaag 6420733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 30664762 - 30664723
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttct 185  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  30664762 atccaactcattaatctctagatctttcttaatagtttct 30664723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 349
Target Start/End: Complemental strand, 39812061 - 39811947
Alignment:
Q  235 catctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgct 334  Q
    ||||||||||||||| ||||||| | |||| || |   ||||||||||||| |||||| |||||||  |||||  |||||| ||||||||| || |||||    
T  39812061 catctgatctactctccttactatagaatctacatctcttctctctacatgcccaaactacctaagccgagttttcaccattttttctatgataggtgct 39811962  T
Q  335 acccaatctctctct 349  Q
     ||| | ||||||||    
T  39811961 gccccaactctctct 39811947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 349
Target Start/End: Complemental strand, 1740932 - 1740791
Alignment:
Q  208 tctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagtt 307  Q
    |||| |||| ||||||| ||||| || ||||||||||||||| ||||||||| |||||||     | || |||||||  ||||||||||||||   ||||    
T  1740932 tctggctctagtgatttgactaccctccatctgatctactctccttactacaaaatccacaattctcctatctacatacccaaaccacctaagcctagtt 1740833  T
Q  308 cccaccatcttttctatgttaagtgctacccaatctctctct 349  Q
     ||||||| |||||||   ||  |||||||||| ||||||||    
T  1740832 tccaccatattttctactgtagatgctacccaaactctctct 1740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 9797768 - 9797813
Alignment:
Q  120 aatgttatatcatatatcatacccctatccaactcattaatctcta 165  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||    
T  9797768 aatgttatatcatacatcatatctctatccaactcattaatctcta 9797813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 30633069 - 30632956
Alignment:
Q  235 catctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgct 334  Q
    ||||| ||||||||| ||||||||| |||||||  || ||||||||||||| |||||||| |||||  ||| | ||||||| |||| |||| || |||||    
T  30633069 catctaatctactctccttactacagaatccac--ac-ttctctctacatgcccaaaccatctaagccgagcttccaccattttttttatgataggtgct 30632973  T
Q  335 acccaatctctctctaa 351  Q
    ||||   ||||||||||    
T  30632972 accccgactctctctaa 30632956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 351
Target Start/End: Original strand, 36514297 - 36514501
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctcttaagttttt-ctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||| ||||| |||||||||||  |||| |||| |||||||| |||||| ||| ||| ||  || ||||| |||| || ||| | ||  ||||||||||    
T  36514297 tccaattcatttatctctagatccttcttgatagcttctcttatgttttttctatgtc-tcccctacctctagtgacttgactcccctctatctgatcta 36514395  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctct 345  Q
    |||| | ||||||| |||||||      |||||||||||| ||||||||||||||   |||| | |||||||||||||   || ||||||||| | ||||    
T  36514396 ctctccatactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactct 36514495  T
Q  346 ctctaa 351  Q
    ||||||    
T  36514496 ctctaa 36514501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 42187568 - 42187471
Alignment:
Q  241 atctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctaccc 338  Q
    ||||||||| |||||||||||||| ||   | |||||| |||||| ||||||||||||||   | || ||||||||||||||||  || |||||||||    
T  42187568 atctactctccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctaccc 42187471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 44401217 - 44401274
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatc 206  Q
    ||||| |||||||||| |||| |||||||||||||||||| | |||||||||||||||    
T  44401217 aactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatc 44401274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 7221006 - 7220846
Alignment:
Q  90 gggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||| |||||||  |||||||| | |||||| || ||||| |||| ||| |  |||||||| |||||||||||| |||| | |||||| |||| ||||    
T  7221006 gggttggctacatggatcaaatgatgtcataattttctatcacatattatatctttatccaacacattaatctctaaatctttgttaataatttcactta 7220907  T
Q  190 -agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
      |||||| |||||| |  ||||||||| || |||| ||||  || ||||| |||||||||    
T  7220906 tggtttttataggtcttactctgcctctagtaatttgactatcctccatctaatctactct 7220846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 16013451 - 16013375
Alignment:
Q  172 tcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||||||||||||||||| |||||||||||||| ||  || ||||||||||||| ||| | ||  ||||||||||||    
T  16013451 tcttaatagtttctcttatagtttttctaggtcttcccctacctctggtgatttgactcctctctatctgatctact 16013375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 22349900 - 22349825
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatata 135  Q
    |||||||||||||| ||||||| |||| || |||| |||||||||  ||||||||||||||| | || |||||||||    
T  22349900 aacaacaatcaagccttatcccactaagtg-gggtcgactacatggatcaaatgacgccatagtattctatcatata 22349825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 27893565 - 27893688
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||| | |||| | ||||| | |||||||| |||||| | ||||||||||| ||||||| | ||||   |  |||| |||||||    
T  27893565 aacaacaaccaagccttatcgcactaagt-agggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcatta 27893663  T
Q  159 atctctagatctatcttaatagttt 183  Q
    ||||||| |||| ||||||||||||    
T  27893664 atctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 34341397 - 34341504
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| |||| || ||||||| |||| | ||||||  ||||||| ||||||||||||| ||||||| | ||||   | ||||||||||||     
T  34341397 aacaacaaacaagccttattccactaaatg-gggtcggctacattggtcaaattacgccataatgttctatcataaaccatatttcaatccaactcattc 34341495  T
Q  159 atctctaga 167  Q
    |||||||||    
T  34341496 atctctaga 34341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 41578172 - 41578248
Alignment:
Q  107 caaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    ||||||| || |||| ||| |||||||||||||| | |||||||||||| ||||||||| || | |||||| |||||    
T  41578172 caaatgatgctataaagttctatcatatatcatatctctatccaactcactaatctctatatgtttcttaacagttt 41578248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 42103607 - 42103669
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctct---taagtttttctaggtc 203  Q
    |||||||||||||||| |||| ||||| |||||| |||||||||   ||||||||||||||||    
T  42103607 ctatccaactcattaacctcttgatctttcttaacagtttctcttaataagtttttctaggtc 42103669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 42177110 - 42177206
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||| |||||||||||| ||||||||| |||||||| || ||||||| ||| || ||  |||||  |||||| ||||| |||||||| |||||    
T  42177110 aactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctccacctctaatgatttgactacccttcatcttatcta 42177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 323
Target Start/End: Complemental strand, 47848838 - 47848690
Alignment:
Q  176 aatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacatt 274  Q
    |||||||||||||| ||||||||||| || || ||||||||| |||||   ||||  || ||||||||||||||| |||| |||| |||  ||     ||    
T  47848838 aatagtttctcttatagtttttctagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtctt 47848739  T
Q  275 ctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||| ||||| ||||||||||||||   | || |||||||||||||||    
T  47848738 ctctcgacatgcccaaaccacctaagcctattttccaccatcttttcta 47848690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 41948582 - 41948519
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctac 336  Q
    ||||||||||||| ||||||||| ||||   |||| ||||||||||||||||  ||||||||||    
T  41948582 ttctctctacatgcccaaaccacttaagcctagtttccaccatcttttctattgtaagtgctac 41948519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 46973787 - 46973728
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||| |||||||||||||||||| | | |||||||||||||||| |||||||| |||||    
T  46973787 tatcccactcattaatctctagatgtttattaatagtttctcttacagtttttcaaggtc 46973728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21078197 - 21078124
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||| ||||| ||||||| |||||||| | | | |||||||  |||||||||||||||||||| |||||||    
T  21078197 aacaacaaccaagccttatcccactaaatgaag-tcggctacatggatcaaatgacgccataatgttctatcata 21078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 23720967 - 23720857
Alignment:
Q  213 ctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccac 312  Q
    |||| ||||||| ||||| || ||||||||||||||| |||| | || || |||| | |||| || || |||| |||||||||||||||  |||  || |    
T  23720967 ctctagtgatttgactaccctacatctgatctactctccttattccacaacccacatgcattttccctgcatgcccaaaccacctaaggctagtctccgc 23720868  T
Q  313 catcttttcta 323  Q
    |||||||||||    
T  23720867 catcttttcta 23720857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 25579210 - 25579320
Alignment:
Q  190 agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggcca 289  Q
    |||||||||||||| || | |  |||| ||||||| ||||  || ||||| ||||||||||||||| ||| |||| || |   ||||||||||||  |||    
T  25579210 agtttttctaggtcttcatttaactcttgtgatttgactatcctccatctaatctactcttcttaccacagaatctacatgtcttctctctacatcccca 25579309  T
Q  290 aaccacctaag 300  Q
    |||||||||||    
T  25579310 aaccacctaag 25579320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 36193736 - 36193838
Alignment:
Q  127 tatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaa 226  Q
    ||||||||| ||||  ||| ||||||||||||||||||  |||| | |||||||| |||||||   ||||||||||  | || ||||||| ||||||| |    
T  36193736 tatcatataccatattcctgtccaactcattaatctctgaatctttgttaatagtctctcttataattttctaggtgtttttttgcctctagtgatttga 36193835  T
Q  227 cta 229  Q
    |||    
T  36193836 cta 36193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 37976429 - 37976371
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||||||||||||| |||| || || ||||||| |||| ||||||||||||||    
T  37976429 atccaactcattaatctctaaatctttcatattagtttcacttatagtttttctaggtc 37976371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 28542032 - 28542069
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagttt 183  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  28542032 atccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 40008490 - 40008535
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatct 162  Q
    ||||||||| |||||||||||||  | |||||||||||||||||||    
T  40008490 cataatgttctatcatatatcatgtctctatccaactcattaatct 40008535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 43282603 - 43282542
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatc 206  Q
    |||||||||| ||| ||| ||| ||  ||||||||||||||||| |||||||||||||||||    
T  43282603 atccaactcaataacctcaagaacttacttaatagtttctcttatagtttttctaggtcatc 43282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 9191960 - 9191928
Alignment:
Q  155 attaatctctagatctatcttaatagtttctct 187  Q
    |||||||||||||||| ||||||||||||||||    
T  9191960 attaatctctagatctttcttaatagtttctct 9191928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 14593928 - 14593852
Alignment:
Q  172 tcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||||||||||||||||| |||||||||||||| ||  || ||||| ||||||| ||| | ||  ||||||||||||    
T  14593928 tcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 14593852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 45558466 - 45558378
Alignment:
Q  235 catctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
    ||||||||||||||| || |||||| |||||||    ||||||||||| ||  |||||||||||||  ||||| | |||| ||||||||    
T  45558466 catctgatctactctcctaactacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttcta 45558378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 294
Target Start/End: Original strand, 10079970 - 10080144
Alignment:
Q  121 atgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggt 219  Q
    ||||| ||||| ||||||||   ||||||||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||||| || ||| ||||| ||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagt 10080069  T
Q  220 gatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaacca 294  Q
    ||||| ||| | |||||| ||||||||||| ||||||||| ||||| |     ||||||||||||| ||||||||    
T  10080070 gatttgactccccttcatttgatctactctccttactacaaaatcctcaggtcttctctctacatgcccaaacca 10080144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 294
Target Start/End: Complemental strand, 29520929 - 29520695
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| ||||||| |||| | |||||||  |||||| ||||||||||||| ||||||| | ||||     |||||||||||||    
T  29520929 aacaacaaccaagcattatcccactaaatg-gggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatta 29520831  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    ||||||| |||  || ||| ||||||||||| |||||||||||| | || ||| ||||| ||||||| ||||  || ||||||||||||||| |||||||    
T  29520830 atctctaaatcgttcctaacagtttctcttatagtttttctagg-cttcctctacctcttgtgatttgactatcctccatctgatctactctccttacta 29520732  T
Q  258 cataatccacgtacattctctctacatggccaaacca 294  Q
    || |||| ||     ||||||||||||| ||||||||    
T  29520731 caaaatctacaagtcttctctctacatgcccaaacca 29520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 129 - 264
Target Start/End: Original strand, 38178331 - 38178467
Alignment:
Q  129 tcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaac 227  Q
    |||||||||||| | ||||||||||||||||| ||||| ||| | |||||||||||||||| |||||||||||||| || ||| ||||| | ||||| ||    
T  38178331 tcatatatcatatctctatccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgac 38178430  T
Q  228 tacgcttcatctgatctactcttcttactacataatc 264  Q
    ||  || ||||||||||||||| ||||||||| ||||    
T  38178431 tatcctccatctgatctactctccttactacaaaatc 38178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 323
Target Start/End: Complemental strand, 16917403 - 16917200
Alignment:
Q  120 aatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctgg 218  Q
    |||||| ||||||||| ||||   |||||||||||||||||||||| ||||  ||| |||||||| | || || ||||||||||| |||||| ||| | |    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtag 16917304  T
Q  219 tgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatctt 318  Q
    |||||| ||||  ||  |||||||||||||| ||||||||| |||| ||   | |||||| |||||| ||||||||||||||   ||||  |||||||||    
T  16917303 tgatttgactatcctcaatctgatctactctccttactaca-aatctacaagccttctctttacatgcccaaaccacctaagcctagtttgcaccatctt 16917205  T
Q  319 ttcta 323  Q
    |||||    
T  16917204 ttcta 16917200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 4011278 - 4011192
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| || |||| |||| | |||||||||||    
T  4011278 tatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgatttaactac 4011192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 23023459 - 23023361
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||| |||| |||||| || |||||||||||||   |||||||||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  23023459 tcaaacgacgtcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtc 23023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 37826521 - 37826374
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    |||||||| ||||||||  | ||||||||| ||||   |||||||||||  ||||||||||||||    ||||||||||||||| ||||| ||||||||     
T  37826521 tcaaatgatgccataatactctatcatataccatatttctatccaactcgctaatctctagatct----taatagtttctcttatagtttatctaggtct 37826426  T
Q  205 tcttctgcctctggtgatttaactacgcttcatctgatctactcttcttact 256  Q
     | ||||||||| ||||||| ||||| |||||||||||||||| | ||||||    
T  37826425 ccctctgcctctagtgatttgactactcttcatctgatctactttccttact 37826374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 16715499 - 16715355
Alignment:
Q  114 cgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgc 212  Q
    |||||||||||| |||||||||||||| ||||||| ||| ||||||||||| ||||  |||| || |||||||||| |   |||||||| | || |||||    
T  16715499 cgccataatgttctatcatatatcatatccctatcaaacccattaatctcttgatccttcttgatggtttctcttataaactttctaggccttcctctgc 16715400  T
Q  213 ctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    | || ||||||| ||||| |  ||||||||||||||| |||||||    
T  16715399 cactagtgatttgactactccccatctgatctactctacttacta 16715355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 35643694 - 35643765
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| || |||||||||    
T  35643694 atccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctct 35643765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 16351569 - 16351451
Alignment:
Q  149 caactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    |||||||||||||||||||||  |||||||||||||||| | |||||||||||||| ||| ||  |||  |||| || ||| | || |||||||||||||    
T  16351569 caactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgatctact 16351470  T
Q  248 cttcttactacataatcca 266  Q
    || |||||||||| |||||    
T  16351469 ctccttactacatgatcca 16351451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 24739924 - 24740021
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||| | |||||||||| ||||||||||| |||| ||| |||||||||||||| | |||||||||||| || | ||||||||||||||| |||||    
T  24739924 tatcatatctctatccaactgattaatctctacatctttctcaatagtttctcttataatttttctaggtcgtcatgtgcctctggtgatttgactac 24740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 38391943 - 38392100
Alignment:
Q  108 aaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatc 206  Q
    |||| |||||||||| || ||||||||| ||||   | |||| |||||||||||| ||||||| ||||||| ||||||| || |||||||||||||| ||    
T  38391943 aaattacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggtttctcatatagtttttctaggtcttc 38392042  T
Q  207 ttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
     |||| || | ||||  | ||||| |||||||||| ||||||| || |||||| ||||    
T  38392043 ctctgtctatagtgagctgactacccttcatctgacctactctcctcactacagaatc 38392100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 10109037 - 10108949
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    |||||||||| ||||||||| |||| | ||||| ||||| ||||||||||||||| ||||| ||||||||||||  |||||||||||||    
T  10109037 ccataatgttctatcatataacatatctctatcaaactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtc 10108949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 43904704 - 43904908
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| ||||||||||||| ||||||| | ||||     |||||||||||||||||||| |||| || |||  |||||||||| ||| ||    
T  43904704 ctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatctctcataaccgtttctcttatagtatt 43904803  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccac 295  Q
    |||||||| || | | ||||| || |||| ||||  || ||||||||||| |||||||||||||  ||| |      ||||||||||||| |||||||||    
T  43904804 tctaggtcttcctgtacctcttgtaatttgactatcctccatctgatctattcttcttactacaacatctataggtcttctctctacatgtccaaaccac 43904903  T
Q  296 ctaag 300  Q
    |||||    
T  43904904 ctaag 43904908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 7531733 - 7531854
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||||||||||  || |||||||||||| || ||||||||||||||  |   | ||||| ||||| | ||| | || |||||||||||    
T  7531733 tccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgatcta 7531832  T
Q  246 ctcttcttactacataatccac 267  Q
    |||| |||||||||||||||||    
T  7531833 ctctccttactacataatccac 7531854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 30198324 - 30198473
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcct 214  Q
    ||||||| || ||||||| | ||||  || |||||||||||||||||| | |||| |||||||| ||||||||| |||||||||| |||  | |||||||    
T  30198324 ccataatattctatcataaaccatattccgatccaactcattaatctcaatatctttcttaataatttctcttatagtttttctaagtctacctctgcct 30198423  T
Q  215 ctggtgatttaactacgcttcatctgatctactcttcttactacataatc 264  Q
    || |||   | ||||  ||||||||||||||||||  |||||||| ||||    
T  30198424 ctagtgtactgactatccttcatctgatctactctcgttactacaaaatc 30198473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 39967554 - 39967643
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctagg 201  Q
    ||||||||||||| || |||| |  ||| | | |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  39967554 acgccataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagtttctcttatagtttttctagg 39967643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 26055644 - 26055592
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatc 169  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  26055644 cataatgttcaatcatatatcatacccctatccatctcattaatctctagatc 26055592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 79223 - 79136
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactac 230  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||| | | || ||||| ||| ||||||| |||||    
T  79223 ctatccagctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctctgcttctagtgatttgactac 79136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 3079691 - 3079793
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||| |||| | |||||| ||||||||||||||||||   || |||||||| || | | ||||| ||||||| ||| | |||||||||||||    
T  3079691 tatccaactcatcaatccccagatctttcttaatagtttctcttatagttatctaggtcttcctttacctctagtgatttcactccccttcatctgatct 3079790  T
Q  245 act 247  Q
    |||    
T  3079791 act 3079793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 296
Target Start/End: Complemental strand, 32043783 - 32043633
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    ||||||||||| |||| ||||||  |||| ||||||||||| | ||||||| |||||| ||  || ||||| ||||||| ||  | || |||||||||||    
T  32043783 tccaactcattgatctttagatccttcttgatagtttctctaatagtttttttaggtcttcccctacctctagtgatttgacacccctccatctgatcta 32043684  T
Q  246 ctcttcttactacataatccacgtacattctctctacatggccaaaccacc 296  Q
     ||| |||||||||  ||||||     ||||||||||||||||||||||||    
T  32043683 ttctccttactacaacatccacaggtcttctctctacatggccaaaccacc 32043633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 32931154 - 32931036
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||| || | |||| || ||||||||||||| | ||||||| |||||| || ||||||||| ||||| | ||||  || |||||||||||    
T  32931154 tccaactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttcctctgcctctagtgatatgactatcctccatctgatcta 32931055  T
Q  246 ctcttcttactacataatc 264  Q
     ||| ||||||||| ||||    
T  32931054 gtctccttactacagaatc 32931036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 264
Target Start/End: Original strand, 35362652 - 35362857
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| || |||| |||| || |||||| || ||||  |||||| ||||||||||||| ||||||| | ||||   |  ||||||||||||    
T  35362652 aacaacaaccaagccttttcccactaagtg-gggttggctgcatggatcaaattacgccataatgttctatcatacaccatatttcagtccaactcatta 35362750  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    || || | |||| || ||||||||||||  | |||||||||||||| || ||||||| | | ||||| ||||  || ||| ||||||||||| ||| |||    
T  35362751 atttccaaatctttcctaatagtttctccgatagtttttctaggtcttcctctgcctatagggatttgactatcctccatttgatctactctccttgcta 35362850  T
Q  258 cataatc 264  Q
    || ||||    
T  35362851 caaaatc 35362857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 39388979 - 39388918
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagtttctctt--aagtttttctaggtc 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||   ||||||||||||||    
T  39388979 ctatccaactcattaatctctagatctttcctaatagtttctctttatagtttttctaggtc 39388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 44175348 - 44175262
Alignment:
Q  104 agtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatctt-aatagtttctctta 189  Q
    ||||||| || || || ||||| |||||||||||||| | ||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  44175348 agtcaaacgaagcgatgatgttttatcatatatcatatctctacccaactcatcaatctctagatctttcttaaatagtttctctta 44175262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 30783130 - 30783207
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgat 222  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||| || || ||||||||| |||||    
T  30783130 atccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgat 30783207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 38689870 - 38689813
Alignment:
Q  126 atatcatatatcatacccctatccaactcattaatctctagatctatcttaatagttt 183  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||  ||||||||||||    
T  38689870 atatcatatatcatatccctatgcaactcattaatctctaggtcattcttaatagttt 38689813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 45512587 - 45512696
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    |||||||||||||| |  ||| || ||||||||||||||| |||||||||||||| || ||||||||| ||||||| ||||     ||||| ||||||||    
T  45512587 aactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactatctgccatctaatctactc 45512686  T
Q  249 ttcttactac 258  Q
    | ||||||||    
T  45512687 tgcttactac 45512696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 9695762 - 9695647
Alignment:
Q  208 tctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatccac-gtacattctctctacatggccaaaccacctaaggtgagt 306  Q
    ||||||||| ||||||| ||||| | | |||| |||||||||  ||||| || |||| || | || ||||||||||||| ||||||||||||||  ||||    
T  9695762 tctgcctctagtgatttgactactccttatctcatctactctctttacttcagaatctacaggac-ttctctctacatgcccaaaccacctaagccgagt 9695664  T
Q  307 tcccaccatcttttcta 323  Q
    | |||||||||||||||    
T  9695663 ttccaccatcttttcta 9695647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 23492314 - 23492171
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||| | |||| || |||| | |||||||  | ||||||| ||||| |||| ||||||||||||||   |||||||||||||||    
T  23492314 aacaacaaacaagccttatctcactaagtg-gggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcatta 23492216  T
Q  159 atctctagatctatcttaatagtttctcttaagtttttctaggtc 203  Q
    ||| ||| |||| ||| | |||||||||| |   |||||||||||    
T  23492215 atcgctacatctttctgagtagtttctctaatagttttctaggtc 23492171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 5908840 - 5908721
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    ||||||||||||||||  | ||||| | |||||||||||||||| |||||||||||||| || | || |||| ||||| | || |  || || |||||||    
T  5908840 atccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcctatgtctctagtgatctgaccatcctccacctgatct 5908741  T
Q  245 actcttcttactacataatc 264  Q
    ||||| ||||||||| ||||    
T  5908740 actctccttactacaaaatc 5908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 7046435 - 7046324
Alignment:
Q  238 ctgatctactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacc 337  Q
    |||||||||||| ||||||||| || | ||||   ||||||||||||| |||||||| |||||  ||| | ||||||||||||||| | |  ||||||||    
T  7046435 ctgatctactctccttactacagaagctacgtgttttctctctacatgcccaaaccagctaagccgaggttccaccatcttttctacgattggtgctacc 7046336  T
Q  338 caatctctctct 349  Q
    ||  ||||||||    
T  7046335 cagcctctctct 7046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 9070175 - 9070124
Alignment:
Q  153 tcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  9070175 tcattaatctctagatctatcataatagtttttcttatagtttttctaggtc 9070124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 300
Target Start/End: Complemental strand, 30559887 - 30559732
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||||||||||||| |||| || | ||||||||||||| ||||||| || ||| || |||  |||| |||||   ||||  || |||||||||     
T  30559887 atccaactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttcatctatctctagtgatccgactatcctccatctgatcc 30559788  T
Q  245 actcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||| | ||||||||| |||| || |   ||||||||| ||| ||||||||||||||    
T  30559787 actgtccttactacaaaatctacatgtcttctctctaaatgcccaaaccacctaag 30559732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 11733981 - 11733899
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt 188  Q
    ||||| |||||||||||| | ||||| ||| ||||   ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  11733981 tcaaacgacgccataatgctctatcacataccatatttctatctaactcattaatctctagatttttctttatagtttctctt 11733899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 17491743 - 17491813
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    ||||||||||||||||| |  ||| |||||||||||||||||| |||||||||||||| || | |||||||    
T  17491743 tccaactcattaatctccaagtctttcttaatagtttctcttacagtttttctaggtcttcctgtgcctct 17491813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 43733402 - 43733328
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctt-aagtttttctaggtcatcttctgcctctgg 218  Q
    |||||||||||||||||||||||||  |||  ||||||||||||  |||||||||||||| || ||| |||||||    
T  43733402 tatccaactcattaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttcctctacctctgg 43733328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 2216481 - 2216405
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctcttaag-tttttctaggtcatcttctgcctctggtgat 222  Q
    |||||||||||| ||||||| |||| |||||||||||||||||| | |||||||||||| || ||| ||||| |||||    
T  2216481 atccaactcattgatctctaaatct-tcttaatagtttctcttatgttttttctaggtcttcctctacctctagtgat 2216405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 3645310 - 3645237
Alignment:
Q  116 ccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||| || ||||| |||||||| | | |||| |||||||||||||||| ||| |||||| |||||||||||    
T  3645310 ccataatattctatcacatatcatatctccatcctactcattaatctctaggtctttcttaacagtttctctta 3645237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 16971843 - 16971956
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatcta 245  Q
    |||||||||||||||| || |||  ||||||| |||||||||| |||||||||| ||  ||   ||| ||| ||||||| ||||| |||||||| || ||    
T  16971843 tccaactcattaatctttatatccttcttaatcgtttctcttatagtttttctaagttttcccgtgcatctagtgatttcactacccttcatctaatata 16971942  T
Q  246 ctcttcttactaca 259  Q
    |||| |||||||||    
T  16971943 ctctccttactaca 16971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 266
Target Start/End: Original strand, 39953356 - 39953473
Alignment:
Q  150 aactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactc 248  Q
    |||||||| |||||||||||  || ||||||||||||||  |||||| |||||||  |  || ||||| ||||| | | |   |||||||||||||||||    
T  39953356 aactcatttatctctagatccttcctaatagtttctcttttagttttcctaggtctacccctacctctagtgatctgattcgccttcatctgatctactc 39953455  T
Q  249 ttcttactacataatcca 266  Q
    | ||||||||||||||||    
T  39953456 tccttactacataatcca 39953473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 16705997 - 16705898
Alignment:
Q  90 gggttgactacatgagtcaaatgacgccataatgttatatc-atatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctt 188  Q
    |||||| |||||||| |||| | |||||||||||||  ||| ||||| ||||   | ||||||||||||||||||||| | | |||||||||||||||||    
T  16705997 gggttggctacatgaatcaatt-acgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctt 16705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 16994503 - 16994590
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||| ||| ||| ||| |||||| | | |||||||||| ||||||||| |||  ||||||||||||||| || ||||||||||||||    
T  16994503 cataacgttctattatacatcatatctcaatccaactcaataatctctaaatcattcttaatagtttctcatatagtttttctaggtc 16994590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 24399877 - 24399920
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||||||||||||| |||||  ||||||||||||||||||    
T  24399877 atccaactcattaatctcgagatccttcttaatagtttctctta 24399920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 27037862 - 27037731
Alignment:
Q  113 acgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctg 211  Q
    |||||||||| || ||||| ||| ||||   ||||||||||||||||||| || |||| || ||||||||| || || |||||| ||||||| |  |||     
T  27037862 acgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagtttatcgtatagttttactaggtctttctcta 27037763  T
Q  212 cctctggtgatttaactacgcttcatctgatc 243  Q
    || || ||||||| || ||||| |||||||||    
T  27037762 ccactagtgatttgaccacgctgcatctgatc 27037731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 28169586 - 28169515
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 216  Q
    |||||||||||||||||| | |||| || ||||||||||||||| ||||||| |||||| || ||| |||||    
T  28169586 atccaactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttcctctacctct 28169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 45331674 - 45331777
Alignment:
Q  164 tagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataa 262  Q
    ||||||| ||||||||| ||| || | |||||||||||||  || ||||||||   |||||| |  || || ||||||||||||||| ||||||||||||    
T  45331674 tagatctttcttaataggttccctaatagtttttctaggttttcctctgcctcgattgatttgatgaccctccatctgatctactctccttactacataa 45331773  T
Q  263 tcca 266  Q
    ||||    
T  45331774 tcca 45331777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 38901821 - 38901950
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||||||||| ||||||| ||| ||| ||||   |||||||| ||||||| ||||||| |||||||||| | | |||  |  | ||||| ||||||    
T  38901821 aacaacaatcaagccttatcccactatatg-gggtccgctacatgaatcaaatgccgccatagtgttatatcaaaaaccatgtctttctccaaatcatta 38901919  T
Q  159 atctctagatctatcttaatagtttctctta 189  Q
    ||||||||||   || |||||||||| ||||    
T  38901920 atctctagattcttcctaatagtttccctta 38901950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 39760504 - 39760558
Alignment:
Q  128 atcatatatcatacccctatccaactcattaatctctagatctatcttaatagtt 182  Q
    ||||||||||||| | |||||||||| |||||||||||||  | |||||||||||    
T  39760504 atcatatatcatatctctatccaacttattaatctctagagttttcttaatagtt 39760558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 11130047 - 11130155
Alignment:
Q  150 aactcattaatctctagatctatctt-aatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctact 247  Q
    ||||||||||  | ||||||| |||| ||||| |||||||| | ||||||||| || ||| ||| |||| ||||||||||||| |||||  |||||||||    
T  11130047 aactcattaacatgtagatctgtctttaatagcttctcttataatttttctagatcttct-ctgtctctagtgatttaactactcttcacatgatctact 11130145  T
Q  248 cttcttacta 257  Q
     |||||||||    
T  11130146 tttcttacta 11130155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 12611777 - 12611640
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| |||| || || | | |||||||  ||||| ||| |||||| ||| || |||||||||||   ||| ||||||||||     
T  12611777 aacaacaaccaagccttatcccactaattg-ggatcggctacatggatcaaacgacaccataaagttctaacatatatcatatttctacccaactcattt 12611679  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctag 200  Q
    ||||||||    |||||| |||||||||||| |||||||||||    
T  12611678 atctctag----atcttactagtttctcttatagtttttctag 12611640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 16035730 - 16035858
Alignment:
Q  60 acaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaa 159  Q
    ||||||||||  ||||||||| |||| || ||||   |||||||| |||||| ||| ||||||||| || |||| | ||||   | |||||||| | |||    
T  16035730 acaacaatcacactttatcccactaagtg-gggtcagctacatgaatcaaattacgtcataatgttctaccataaaccatatttcgatccaactaagtaa 16035828  T
Q  160 tctctagatctatcttaatagtttctctta 189  Q
    ||||||||| | |||||| |||||||||||    
T  16035829 tctctagatatttcttaacagtttctctta 16035858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 25985686 - 25985601
Alignment:
Q  172 tcttaatagtttctc-ttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttact 256  Q
    ||||||||||||| | || |||||||||||||| || ||| ||||| ||||||| ||| | || ||||||||||| ||| ||||||    
T  25985686 tcttaatagtttcccatttagtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttact 25985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 29700438 - 29700349
Alignment:
Q  178 tagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatcca 266  Q
    |||||||||||  |||||||||||||| || ||| ||||| ||||| | ||||  || ||||| ||||||||| ||||||||| ||||||    
T  29700438 tagtttctcttttagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatcca 29700349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 38483055 - 38483092
Alignment:
Q  144 ctatccaactcattaatctctagatctatcttaatagt 181  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  38483055 ctatccaactcattaatctctagatctttctgaatagt 38483092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 323
Target Start/End: Complemental strand, 11986 - 11814
Alignment:
Q  151 actcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| || |||| ||||||| ||||||| ||||| || || | ||||||||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgatttcactaccctccaccggatctactct 11887  T
Q  250 tcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttcta 323  Q
     || | ||||| | | ||  |  ||||||||||||| ||||||||||||||  ||||||| |||||||||||||    
T  11886 cctcaatacat-agctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttcta 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 34544 - 34676
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| ||||||||||||| ||||||| | ||||   | ||||||||||||||||| ||||||| ||||||| |||||||||| ||||||    
T  34544 ctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttt 34643  T
Q  196 tctaggtcatcttctgcctctggtgatttaact 228  Q
    |||||||| || ||||||||| ||||| |||||    
T  34644 tctaggtcttcctctgcctctagtgatctaact 34676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 300
Target Start/End: Original strand, 9593796 - 9593949
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    ||||||||||||||||||||  ||| || ||||||||||||||| | |||||||||||| || ||| |||||  |||||| |||   || ||||||||||    
T  9593796 atccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctct--tgatttgactctcctccatctgatct 9593893  T
Q  245 actcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||||||||||||||  ||| || |   ||||||||||||| ||||||||||||||    
T  9593894 actcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaag 9593949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 256
Target Start/End: Complemental strand, 31818811 - 31818614
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| |||||||| ||||||||| || |||| | |||||||  |||||| ||| ||||||||| ||||||| | |||||    |||||||||||||    
T  31818811 aacaacaaccaagctttttcccgctaagtg-gggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcatta 31818713  T
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttact 256  Q
    ||||| | | || || ||||||||||||||| |||||||||||||| ||| || ||| | ||||| | ||||| || ||| ||||||||| | ||||||    
T  31818712 atctccaaacctttcctaatagtttctcttatagtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctactttccttact 31818614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 300
Target Start/End: Original strand, 31831947 - 31832102
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||| |||||||||||||| |||||||||||||||| | ||||||||||||   || |||   |||| |||| | ||||  || ||||||||||    
T  31831947 atccaactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctgactatcctccatctgatct 31832046  T
Q  245 actcttcttactacataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    ||||| ||| ||| ||||||  || || ||||||||||||| ||||||||| ||||    
T  31832047 actctacttgctatataatctccggaccttctctctacatgtccaaaccacttaag 31832102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 33997592 - 33997726
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtca 204  Q
    ||||||||||||||||||||  ||||| || ||||   |||||||||||||||||||||||   | |||||||||||||||||| |||||| | |||||     
T  33997592 tcaaatgacgccataatgttcaatcatgtaccatatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtct 33997691  T
Q  205 tcttctgcctctggtgatttaactacgcttcatct 239  Q
    || ||||||||| ||| ||| ||||| || |||||    
T  33997692 tcctctgcctctagtgttttgactaccctccatct 33997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 324
Target Start/End: Original strand, 43140 - 43319
Alignment:
Q  146 atccaactcattaatctctagatctatcttaatagtttctctt--aagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatc 243  Q
    ||||||||||||| ||||||||||| | |||||||||||||||  ||||| ||||||||| ||  |||||||| | ||| | ||||  | ||| ||||||    
T  43140 atccaactcattactctctagatctttattaatagtttctcttaaaagttgttctaggtcttccgctgcctctagagatctgacta-tcctcacctgatc 43238  T
Q  244 tactcttcttactacataatccacgtacattctctctacatggccaaaccacctaaggtgagttcccaccatcttttctat 324  Q
    |||||||||  ||||| |||| |   |  ||||||||||||||||| ||||||||||   |||| ||||||| ||||||||    
T  43239 tactcttctcgctacaaaatctataaatcttctctctacatggccagaccacctaagcctagtttccaccattttttctat 43319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 300
Target Start/End: Complemental strand, 24666034 - 24665849
Alignment:
Q  117 cataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctc 215  Q
    ||||||||| ||||||| | ||||   | |||||||||||| | ||||| || | |||||||||||||||||  |||| ||||| | | || ||||||||    
T  24666034 cataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctcttgtagttattctatgacttcctctgcctc 24665935  T
Q  216 tggtgatttaactacgcttcatctgatctactcttcttactac-ataatccacgtacattctctctacatggccaaaccacctaag 300  Q
    |||||||   |||| ||||||||||||||||||| |||||||| | |||| ||     ||||||||||||| ||||||||||||||    
T  24665934 tggtgatccgactatgcttcatctgatctactctccttactacaaaaatctacaggtcttctctctacatgtccaaaccacctaag 24665849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 6906915 - 6907034
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatct 244  Q
    |||||||||| ||||| ||||||||| |||||||||| ||| |  || ||||| || || || ||| ||||| ||||||| ||||| || ||||||||||    
T  6906915 tatccaactcgttaatatctagatctttcttaatagtctctttatagcttttcaagatcttcatctacctctcgtgatttgactaccctgcatctgatct 6907014  T
Q  245 actcttcttactacataatc 264  Q
    ||||| ||||||||| ||||    
T  6907015 actctccttactacaaaatc 6907034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 21870139 - 21870272
Alignment:
Q  131 atatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-ag--tttttctaggtcatcttctgcctctggtgatttaac 227  Q
    |||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||  | ||  |||||||||||| || ||||||| | ||||||| ||    
T  21870139 atatatcatatccctatataactcattaatctctagatc---cttaatagtttctcagatagtttttttctaggtcttcctctgcctttagtgatttgac 21870235  T
Q  228 tacgcttcatctgatctactcttcttactacataatc 264  Q
    ||| || ||||| ||||||||| ||||||||| ||||    
T  21870236 tactctccatcttatctactctccttactacaaaatc 21870272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 10617323 - 10617401
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgattt 224  Q
    |||||||||||||||||||||||  ||||||| |||||||||| |||||||||||||  |||||| ||||| |||||||    
T  10617323 tccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctagtgattt 10617401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 1747712 - 1747841
Alignment:
Q  129 tcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaac 227  Q
    |||||||||||| |  |||||||||||||||||||||||||  |||||  |||||||||||  ||||||||||||| || ||||||||| |  |||| ||    
T  1747712 tcatatatcatatctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctctagaaatttgac 1747811  T
Q  228 tacgcttcatctgatctactcttcttacta 257  Q
    ||| || ||||| | | ||||| |||||||    
T  1747812 taccctccatctaagccactctccttacta 1747841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 1681597 - 1681652
Alignment:
Q  134 tatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  1681597 tatcatatccctacccaactcattaatctctagatccttcttaatagtttctctta 1681652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 8364799 - 8364646
Alignment:
Q  97 ctacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttt 195  Q
    |||||||  |||||| ||||||||||||| ||||||| | |||    |  ||||||| |||||| |||| |||| |||||||||||||||||| ||||||    
T  8364799 ctacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctcttatagtttt 8364700  T
Q  196 tctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactct 249  Q
    | |||||| || ||| ||||| ||||| | || |  || |||||||||||||||    
T  8364699 tttaggtcttcatcttcctctagtgatctgacaatcctccatctgatctactct 8364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 250
Target Start/End: Original strand, 35199680 - 35199815
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcc 213  Q
    ||||||||||| ||||||||| ||||   ||||| ||||||||||||||||||||| || ||||||||||| ||| | ||||||||  || |  |||  |    
T  35199680 gccataatgttctatcatata-catatttctatctaactcattaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagc 35199778  T
Q  214 tctggtgatttaactacgcttcatctgatctactctt 250  Q
    ||| ||||| | ||||| || ||||||||||||||||    
T  35199779 tctagtgatatgactaccctccatctgatctactctt 35199815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 7513478 - 7513601
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttc-tgcctctggtgatttaactacgcttcatctgatct 244  Q
    ||||||||||| |||||||||||  || ||| ||||||||||| ||||| || ||||| ||  | ||||||| ||||||| ||| | ||  |||||||      
T  7513478 tccaactcattcatctctagatccttcctaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcaatctgattg 7513577  T
Q  245 actcttcttactacataatccacg 268  Q
    ||||||||||||||||||||||||    
T  7513578 actcttcttactacataatccacg 7513601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 4948405 - 4948511
Alignment:
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    |||||||||||| ||| |||||||| ||||  ||||||| |||||| || ||| ||||| ||| ||| ||||   | ||||||||||||||| |||||||    
T  4948405 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttacta 4948504  T
Q  258 cataatc 264  Q
    |||||||    
T  4948505 cataatc 4948511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 4955376 - 4955482
Alignment:
Q  159 atctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttacta 257  Q
    |||||||||||| ||| |||||||| ||||  ||||||| |||||| || ||| ||||| ||| ||| ||||   | ||||||||||||||| |||||||    
T  4955376 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttacta 4955475  T
Q  258 cataatc 264  Q
    |||||||    
T  4955476 cataatc 4955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 26676381 - 26676435
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaat 160  Q
    ||||||| |||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  26676381 tcaaatgccgccataatgttctataatatagcatatccctatccaactcattaat 26676435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 26677561 - 26677615
Alignment:
Q  106 tcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaat 160  Q
    ||||||| |||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  26677561 tcaaatgccgccataatgttctataatatagcatatccctatccaactcattaat 26677615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 268
Target Start/End: Complemental strand, 5053806 - 5053598
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||  ||||||| |||| | ||||||   ||||| ||||| | |||| | ||||||||| ||||  |||| |||||||||||    
T  5053806 aacaacaaccaagccttatcctactaaatg-gggtcggctacattgatcaaacgacgcaacaatgctttatcatataccatattcctaaccaactcatta 5053708  T
Q  159 atctctagatctatcttaatagtttctcttaagtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttactac 258  Q
    ||||||  |||| |  ||| |||||||||||    |||||||||| || | ||||||  ||||||| ||||| || | | | | ||||||| ||| ||||    
T  5053707 atctctgaatctttggtaacagtttctcttataactttctaggtcttcctttgcctcgagtgatttgactaccctccgtgttaactactctccttcctac 5053608  T
Q  259 ataatccacg 268  Q
    ||||||||||    
T  5053607 ataatccacg 5053598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 38956 - 38900
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggt 202  Q
    ||||||||||| |||||||||||  || ||||||||||||||| |||||||||||||    
T  38956 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggt 38900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 1747983 - 1748074
Alignment:
Q  96 actacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctct 187  Q
    ||||||||  ||||| |||| | ||||||| |||||||||  |||   |||||||||||||||||||||| || | ||||| ||||||||||    
T  1747983 actacatggatcaaacgacgtcgtaatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttctct 1748074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 14389384 - 14389461
Alignment:
Q  273 ttctctctacatggccaaaccacctaaggtgagttcccaccatcttttctatgttaagtgctacccaatctctctctaa 351  Q
    ||||||||||||| ||||||||||||| ||  ||| ||||||||||||||| | || ||||||||  | ||||||||||    
T  14389384 ttctctctacatgtccaaaccacctaa-gtttgtttccaccatcttttctacgataggtgctacctcaactctctctaa 14389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 579601 - 579472
Alignment:
Q  157 taatctctagatctatcttaatagtttctctta-agtttttctaggtcatcttctgcctctggtgatttaactacgcttcatctgatctactcttcttac 255  Q
    |||| |||| |||| |||||||||||||||||| |||||||  ||||| |  ||||||||| |||||   ||||  || ||||||||| ||||| |||||    
T  579601 taatttctatatctttcttaatagtttctcttacagttttttgaggtctttctctgcctctagtgatcagactatcctccatctgatcaactctccttac 579502  T
Q  256 tacataatccacgtacattctctctacatg 285  Q
    || |||||| ||   | |||||||||||||    
T  579501 tatataatctacaagccttctctctacatg 579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 32080714 - 32080669
Alignment:
Q  95 gactacatgagtcaaatgacgccataatgttatatcatatatcata 140  Q
    |||||||||  |||||| ||||||||||||||||||||| ||||||    
T  32080714 gactacatgtatcaaattacgccataatgttatatcataaatcata 32080669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 586130 - 586055
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatata 135  Q
    ||||||||||||| ||||||||  ||| ||| ||| | || ||||| |||||||||| ||||||||| |||||||||    
T  586130 aacaacaatcaaggtttatcccattaagtga-ggtcggctccatgaatcaaatgacgtcataatgttctatcatata 586055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 178509 - 178566
Alignment:
Q  147 tccaactcattaatctctagatctatcttaatagtttctctta-agtttttctaggtc 203  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  178509 tccaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtc 178566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 2358 - 2432
Alignment:
Q  115 gccataatgttatatcatatatcatacccctatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    ||||||||||| ||| ||||| ||||   ||||| ||||||||||||||||||||| |||||||||| |||||||    
T  2358 gccataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctctta 2432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 66777 - 66660
Alignment:
Q  101 atgagtcaaatgacgccataatgttatatcatatatcatacc-cctatccaactcattaatctctagatctatcttaatagtttctctta-agtttttct 198  Q
    |||| |||||| ||||||||||||| |||||||   ||||   |||||| ||||||||||||||||||||| |||||||| ||| | ||| | |||||||    
T  66777 atgaatcaaattacgccataatgttctatcataagccatatttcctatctaactcattaatctctagatctttcttaataattttttttataatttttct 66678  T
Q  199 aggtcatcttctgcctct 216  Q
    ||||| || |||||||||    
T  66677 aggtcttcctctgcctct 66660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 160326 - 160454
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| || |||| |||| || |||||| |||||||| |||||| ||||||||||||| ||||||| | ||||   |  || |||||||||    
T  160326 aacaacaaccaagccttttcccactaagtg-gggttggctacatgattcaaattacgccataatgttctatcataaaccatatttcggtcgaactcatta 160424  T
Q  159 atctctagatctatcttaatagtttctctt 188  Q
    || |||  |||| || ||||||||||||||    
T  160425 atttcttaatctttcctaatagtttctctt 160454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 611 - 538
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcata 133  Q
    |||||||||||||| ||||||| |||| || |||| | |||||||  ||||||||||||||| |||| |||||||    
T  611 aacaacaatcaagccttatcccactaagtg-gggtcggctacatggatcaaatgacgccatagtgttctatcata 538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 25445 - 25550
Alignment:
Q  59 aacaacaatcaagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcatacccctatccaactcatta 158  Q
    |||||||| ||||| ||||||| | || || || ||||||||||   ||||| || ||||||||||| ||||||||| | ||   |||||||||||||||    
T  25445 aacaacaaccaagccttatcccacaaagtg-ggattgactacatagatcaaacgaagccataatgttttatcatataacttatttctatccaactcatta 25543  T
Q  159 atctcta 165  Q
    |||||||    
T  25544 atctcta 25550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 6783 - 6854
Alignment:
Q  68 caagctttatcccgctaaatgagggttgactacatgagtcaaatgacgccataatgttatatcatatatcata 140  Q
    ||||| ||||||| |||| || |||||| |||||||  |||||| | ||||||||||||||||||||| ||||    
T  6783 caagccttatcccactaagtg-gggttggctacatggatcaaattatgccataatgttatatcatataccata 6854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 17734 - 17690
Alignment:
Q  145 tatccaactcattaatctctagatctatcttaatagtttctctta 189  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||    
T  17734 tatccaacccattaatctctaaatcttttttaatagtttctctta 17690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University