View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11619_high_5 (Length: 538)
Name: NF11619_high_5
Description: NF11619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11619_high_5 |
 | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold2156 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 486; Significance: 0; HSPs: 55)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 11 - 521
Target Start/End: Original strand, 19333453 - 19333963
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19333453 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
19333552 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagnnnnnnngaaaactctgcacatggatagtcttcat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19333553 |
catcacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagaaaaaaagaaaactctgcacatggatagtcttcat |
19333652 |
T |
|
| Q |
211 |
tggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcac |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19333653 |
tggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcac |
19333752 |
T |
|
| Q |
311 |
tattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctggaaacaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19333753 |
tattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctagaaacaa |
19333852 |
T |
|
| Q |
411 |
ctttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagataccttcaagc |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19333853 |
ctttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagataccttcaagc |
19333952 |
T |
|
| Q |
511 |
ttgctaaacct |
521 |
Q |
| |
|
||||||||||| |
|
|
| T |
19333953 |
ttgctaaacct |
19333963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 188 - 521
Target Start/End: Original strand, 18115586 - 18115919
Alignment:
| Q |
188 |
ctctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttca |
287 |
Q |
| |
|
|||| |||||||||| |||| |||||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||| |||||||||||||| | |||| |
|
|
| T |
18115586 |
ctcttcacatggataatcttggttggctttctccacattcttccttgaaatatctcgaccttagtggaattcatcttcataaggaaaccaattggcttca |
18115685 |
T |
|
| Q |
288 |
aatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgta |
387 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||| | ||||| |
|
|
| T |
18115686 |
aatagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaacttcccatctgttgagtatttgaatttgtctttacttgta |
18115785 |
T |
|
| Q |
388 |
actcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaata |
487 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||| || |||| |
|
|
| T |
18115786 |
actcttgatctttctttaaacaacttcacctctcatttacctgatgggttttttaatcttaccaaagatctcacttatcttgacctttcacagagtaata |
18115885 |
T |
|
| Q |
488 |
tatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18115886 |
tatatggtgagataccttcaagcttgctaaacct |
18115919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 188 - 521
Target Start/End: Original strand, 19461153 - 19461486
Alignment:
| Q |
188 |
ctctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttca |
287 |
Q |
| |
|
|||| |||||||||| |||| |||||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||| |||||||||||||| | |||| |
|
|
| T |
19461153 |
ctcttcacatggataatcttggttggctttctccacattcttccttgaaatatctcgaccttagtggaattcatcttcataaggaaaccaattggcttca |
19461252 |
T |
|
| Q |
288 |
aatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgta |
387 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || |||||||||||||||||||| | ||||| |
|
|
| T |
19461253 |
aatagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaatttcccatctgttgagtatttgaatttgtctttacttgta |
19461352 |
T |
|
| Q |
388 |
actcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaata |
487 |
Q |
| |
|
||||||||||||||| |||||| || ||||||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||| || |||| |
|
|
| T |
19461353 |
actcttgatctttctttaaacaatttcacctctcatttacctgatgggttttttaatctcaccaaagatctcacttatcttgacctttcacagagtaata |
19461452 |
T |
|
| Q |
488 |
tatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
19461453 |
tatacggtgagataccttcaagcttgctaaacct |
19461486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 204 - 521
Target Start/End: Original strand, 19413821 - 19414138
Alignment:
| Q |
204 |
tcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcactt |
303 |
Q |
| |
|
|||||||||||||| | |||||||||| || |||||||||| ||||||| |||||||||| |||||||||||||| | ||||||||||||| ||||| |
|
|
| T |
19413821 |
tcttcattggctttatccactttcttcgttgaaatatctcacccttagttggattgatcttcataaggaaaccaattggcctcaaatagtgaatacactt |
19413920 |
T |
|
| Q |
304 |
ccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctg |
403 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| | || |||||||||| || |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19413921 |
ccttcactattagaattacagatgagtcattgtaacctaaataacttcccatctgttgagcatttgaatttgtcttcaattgtaactcttgatctttctt |
19414020 |
T |
|
| Q |
404 |
gaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagatacc |
503 |
Q |
| |
|
|||||||| ||||||||| ||| |||||||||||||||||| |||||||||||| | ||| |||||||| | | ||||||| ||||||||||||| |
|
|
| T |
19414021 |
acaacaacttcacctctcatatacctgatgggttttttaatctcaccaaagatctcacctctcttgacctttcatatagcaatatacatggtgagatacc |
19414120 |
T |
|
| Q |
504 |
ttcaagcttgctaaacct |
521 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
19414121 |
ttcaagcttgctaaacct |
19414138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 187 - 521
Target Start/End: Original strand, 18015714 - 18016048
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttc |
286 |
Q |
| |
|
||||| |||||||||| ||| |||||||||| ||| ||| || || |||||||||||||||||| |||||||||| |||||||||||||| | ||| |
|
|
| T |
18015714 |
actcttcacatggataatctggattggctttcaccacattcgtcgttgaaatatctcaaccttagttggattgatcttcataaggaaaccaattggcttc |
18015813 |
T |
|
| Q |
287 |
aaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||| || |||||||||||||||| ||||| |||| |
|
|
| T |
18015814 |
aaatagtgaattcacttccttcactattagaattagagttgagtgggtgcaacctgaacaacttcccatctgttgagtatttgaatttgccttcacttgt |
18015913 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaat |
486 |
Q |
| |
|
||||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||| | ||| |||||||| | | |||| |
|
|
| T |
18015914 |
aactctttctctttctttcaacaacttcacctctcatatacctgatgggttttttaatctcaccaaagatctcacctctcttgacctttcatatagcaat |
18016013 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||| |
|
|
| T |
18016014 |
atacatggtgagataccttctagcttgctaaacct |
18016048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 188 - 521
Target Start/End: Original strand, 19380514 - 19380847
Alignment:
| Q |
188 |
ctctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttca |
287 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| | ||| |||||| |||||||| |||| |||||| |
|
|
| T |
19380514 |
ctctgcacatggataatcttgattggctttctccactttcttccttaaaatatctcaacctcgatggaatttatcttcataaggaaaataattggtttca |
19380613 |
T |
|
| Q |
288 |
aatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgta |
387 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||| ||||| |
|
|
| T |
19380614 |
agtagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaacttcccatctgttgagtatttgaatttgtcttcacttgta |
19380713 |
T |
|
| Q |
388 |
actcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttgg-aacaat |
486 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||| |||| |||||||| |||||||| | |||||| |||| | ||| | ||| || | |||| |
|
|
| T |
19380714 |
actctccatctttctggaaacaacttcacctctcacttaccagatgggttgtttaatctcacgaaagatatcaactctct-tagatttgagggtagcaat |
19380812 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
19380813 |
atatatggtgagatgccttcaagcttgctaaacct |
19380847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 204 - 521
Target Start/End: Original strand, 19351031 - 19351348
Alignment:
| Q |
204 |
tcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcactt |
303 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||||||||| | |||||||||||||||||||| |
|
|
| T |
19351031 |
tcttgattggctttctccactttcttccataaaatatctcaacctcggtggaattgatcttcataaggaaaccaattggcttcaaatagtgaattcactt |
19351130 |
T |
|
| Q |
304 |
ccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctg |
403 |
Q |
| |
|
|||||||| ||| ||||||||||| |||| ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
19351131 |
ccttcactgttaaaattacagttgggtgaatgtaacctgaacaacttcccatctgttgagtatttgaatttgtcttcacttgtaactcttgatctttttc |
19351230 |
T |
|
| Q |
404 |
gaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagatacc |
503 |
Q |
| |
|
|||| ||||| | || | |||||| ||||||||||||||||| |||||||||||| ||||| ||||||| | |||||||||||| ||||||| |
|
|
| T |
19351231 |
gaaataacttcaactttaatttaccagatgggttttttaatctcaccaaagatctcacttatcttcacctttcacaaagtaatatatatggtaagatacc |
19351330 |
T |
|
| Q |
504 |
ttcaagcttgctaaacct |
521 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
19351331 |
ttcaagcttactaaacct |
19351348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 187 - 521
Target Start/End: Original strand, 19375305 - 19375648
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacat---------tgatcttcctaaggaaacca |
277 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| || | |||||||| ||||| ||||| |
|
|
| T |
19375305 |
actctgcacatggataatcttcaatggctttcttcactttcttccttgaaatatctcaacctcggtggagtctttggagttgatcttcataaggtaacca |
19375404 |
T |
|
| Q |
278 |
atttgtttcaaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtc |
377 |
Q |
| |
|
||| |||| || |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| || ||||| |||||||||||| |
|
|
| T |
19375405 |
attggtttgaagtagtgacttcacttccttcactattagaattacagttgagtcggtgtaacctgaacaactttccatctgttgagtttttgaatttgtc |
19375504 |
T |
|
| Q |
378 |
ttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttct |
477 |
Q |
| |
|
||||||||||| ||||||||||||| |||||| || |||| |||||||| |||||||||||||||||| |||||||| ||| ||||| |||||| | |
|
|
| T |
19375505 |
ttcaattgtaagtcttgatctttcttcaaacaatttcacctttcatttacctgatgggttttttaatctcaccaaagatatcacctatcttgaccttgcg |
19375604 |
T |
|
| Q |
478 |
tggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19375605 |
atgaataatatatatggtgagataccttcaagcttgctaaacct |
19375648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 189 - 446
Target Start/End: Original strand, 18103052 - 18103309
Alignment:
| Q |
189 |
tctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaa |
288 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||| |
|
|
| T |
18103052 |
tctgcacatggatagtcttcactggctttctccactttcttccttaaaatatctcaaccttagttggattgatcttcataaggaaaccaactggtttcaa |
18103151 |
T |
|
| Q |
289 |
atagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaa |
388 |
Q |
| |
|
|||| | | ||||||||||| | |||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||| |
|
|
| T |
18103152 |
gtagtaagtacacttccttcattgttagaattacagttgagttattgtaacctgaacaacttcccatcagttgagtatttgaatttgtattcaattgtaa |
18103251 |
T |
|
| Q |
389 |
ctcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatct |
446 |
Q |
| |
|
| ||||||||||| | |||||| || || | |||||||| |||||||||||||||||| |
|
|
| T |
18103252 |
cccttgatctttcagaaaacaatttcacttttcatttacatgatgggttttttaatct |
18103309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 11 - 521
Target Start/End: Original strand, 17941200 - 17941689
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |||||| ||||||| |||||||||||||| |||||| |
|
|
| T |
17941200 |
gtgagatgaatctttgtattcttgaacttgagtttctcagttatttggatttgagtgataataaatttgatgtgataagaattccatccattcaacacaa |
17941299 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagnnnnnnngaaaactctgcacatggatagtcttcat |
210 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| |||||| |||||| ||| ||| ||| || ||||| |||||||||| ||||||| |
|
|
| T |
17941300 |
catcacacattcctctaaacttgtccaccttaacttat-cctcct--tcaatttt---gat------------aatactcttcacatggataatcttcat |
17941381 |
T |
|
| Q |
211 |
tggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcac |
310 |
Q |
| |
|
||||||||| || ||||| |||| ||||||||| ||||||| ||||||||||| | ||||||| |||| | ||||| ||||||| |||||||||||| |
|
|
| T |
17941382 |
tggctttctccattttctaccttgaaatatctccgccttagtggcattgatcttcatgaggaaactaattggcttcaagcagtgaatacacttccttcac |
17941481 |
T |
|
| Q |
311 |
tattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctggaaacaa |
410 |
Q |
| |
|
||||||| |||| || | |||||| ||||||||||||||| || ||| |||||||||||||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
17941482 |
tattagagttacgattaaaaagttgtaacctgaacaacttcccatctgttgaatatttgaatttgtcttcacttgtaactctttctctttctagaaacaa |
17941581 |
T |
|
| Q |
411 |
ctttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagataccttcaagc |
510 |
Q |
| |
|
|| |||||| || ||| |||||||||||||||||| ||||| |||||| ||||| ||||| ||| ||||||||| ||| |||||||||||| |
|
|
| T |
17941582 |
tttcacctcttatatacctgatgggttttttaatctcaccaaaaatctcacttatctttaccttcgggggagcaatatata---tgatataccttcaagc |
17941678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 189 - 427
Target Start/End: Original strand, 19436490 - 19436728
Alignment:
| Q |
189 |
tctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaa |
288 |
Q |
| |
|
|||||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||| | | |||||||||| |||||||||||| | ||||||| |
|
|
| T |
19436490 |
tctgcacatgaataatcttgattggctttcttccctttcttccttaaaatatctcaaccttactgaaattgatcttcataaggaaaccaactggtttcaa |
19436589 |
T |
|
| Q |
289 |
atagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaa |
388 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||| ||||||| || ||||||||| ||||| |||||| |||||| |
|
|
| T |
19436590 |
gcagtgaattcactttcttcactattagaattacagttgcgtgaatgtaacttgaacaaattcccatctgttgagtatttcaatttatcttcacttgtaa |
19436689 |
T |
|
| Q |
389 |
ctcttgatctttctggaaacaactttacctctcatttac |
427 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||| |
|
|
| T |
19436690 |
ctcttgatctttctggaaacaaattcacctcttatttac |
19436728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 187 - 517
Target Start/End: Original strand, 19399328 - 19399658
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttc |
286 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||||||||| | ||||| |
|
|
| T |
19399328 |
actctgcaaatggataatcttgattggctttctccactttcttccttaaaatatctcaaccttaattggattgatcttcataaggaaaccaactggtttc |
19399427 |
T |
|
| Q |
287 |
aaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
|| |||| | | ||||||| ||| | || |||||||||||||||| ||||| |||||||||| |||| | |||||||||||||||||||||| |||| |
|
|
| T |
19399428 |
aagtagtaagtacacttccgtcattgtttgaattacagttgagtgcatgtaacctgaacaactttccatctcttgagtatttgaatttgtcttcacttgt |
19399527 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaat |
486 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||| ||| |||||||||||||||| | |||||||||||| | ||| ||||| |||||| |
|
|
| T |
19399528 |
aactcttgatctttcaaacaacaacttcacctttcatatacctgatgggttttttaatttcaccaaagatctcacctgtctttaccttgacaataacaat |
19399627 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaa |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
19399628 |
atatatggtgagataccttcaagcttgctaa |
19399658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 187 - 521
Target Start/End: Original strand, 18146441 - 18146784
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttc |
286 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||| ||||||| | |||||||||| ||||||||||| | ||||| |
|
|
| T |
18146441 |
actctgcacatgcataatcttcattggctttctccactttcttccttgaaatatctctcccttagtgagattgatcttcacaaggaaaccaactggtttc |
18146540 |
T |
|
| Q |
287 |
aaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtc |
377 |
Q |
| |
|
|| |||| ||||||||||||||||||||| ||||| ||||| | ||||||| |||||||||| | ||| | || ||||||||||||||| |
|
|
| T |
18146541 |
aagtagtaaattcacttccttcactattaaaattaaagttgtttaattgtaacctgaacaacttcataattaacacatctattgggtatttgaatttgtc |
18146640 |
T |
|
| Q |
378 |
ttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttct |
477 |
Q |
| |
|
|||| || |||||||||||||||| ||||| || || ||||||||||||| |||||||| |||||||||| |||||||| |||| ||||| |||| |
|
|
| T |
18146641 |
ttcacttataactcttgatctttcaggaaataatttaacctctcatttacctgatgggtattttaatcttaccaaagatatcaactatcttagccttgag |
18146740 |
T |
|
| Q |
478 |
tggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18146741 |
gagagcaatatatatggtgagataccttcaagcttgctaaacct |
18146784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 196 - 518
Target Start/End: Original strand, 18164776 - 18165107
Alignment:
| Q |
196 |
atggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtga |
295 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| | ||||| ||||| |
|
|
| T |
18164776 |
atggataatcttgattggctttctccactttcttccttgaaatatctcaaccttagttttattgatcttcataaggaaaccaattggattcaagcagtga |
18164875 |
T |
|
| Q |
296 |
attcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||| || ||||||||||| ||| | | ||||| ||||||||||||||||||| |
|
|
| T |
18164876 |
gtacacttccttcactattagaattacagttgagtaattgcaacctgaacaacttcataattggaacatcttttaagtatgtgaatttgtcttcaattgt |
18164975 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaat |
486 |
Q |
| |
|
|||||||||||||||| ||| | || |||||||| ||||||||||| ||||||||||| |||||||| |||| | ||| |||||| |||||||| |
|
|
| T |
18164976 |
aactcttgatctttcttacaactatttcacctctcacttacttgatggattttttaatctcaccaaagatatcaactttcttagcctttcagggaacaat |
18165075 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaaa |
518 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |
|
|
| T |
18165076 |
ataaatggtgagataccttcaagcttgctaaa |
18165107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 196 - 446
Target Start/End: Original strand, 18143862 - 18144121
Alignment:
| Q |
196 |
atggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtga |
295 |
Q |
| |
|
||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
18143862 |
atggataatcttgattggctttctccactttcttccttaaaatatctcaacctcagtggaattgatcttcataaggaaaccaattggcttcaaatagtga |
18143961 |
T |
|
| Q |
296 |
attcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| | |||||||||||||||| |||||||| |
|
|
| T |
18143962 |
atacacttccttcactattagaattacagttgagttcttgtaacctgaacaacttaatgatcaacccatatatcaagtatttgaatttgtcgtcaattgt |
18144061 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatct |
446 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||| |
|
|
| T |
18144062 |
aactcttgatctttctttaaacaacttcacctctcatttacctgataggttttttaatct |
18144121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 193 - 512
Target Start/End: Original strand, 18022419 - 18022747
Alignment:
| Q |
193 |
cacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatag |
292 |
Q |
| |
|
||||| |||| |||| | ||||||||||||||||||||||| ||||||||| |||| ||| ||||||||| |||||||||||| | ||||||| || |
|
|
| T |
18022419 |
cacatagataatcttgactggctttcttcactttcttccttgaaatatctcgacctcagtggacttgatcttcataaggaaaccaactggtttcaagtaa |
18022518 |
T |
|
| Q |
293 |
tgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtcttcaat |
383 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| ||||| | |||||||||||||||||||||| | |
|
|
| T |
18022519 |
tcaattcacttccttcactattacaattacagttgagcgattgtaaattgaatagcttcatgatcaacccatctattgagtatttgaatttgtcttcact |
18022618 |
T |
|
| Q |
384 |
tgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaac |
483 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||| |||| ||||| | ||| | || | |
|
|
| T |
18022619 |
tgtaactcttgatctttctttcaacaacttcacctctcatttaccaaatgggttttttaatctcaccaaagatatcaactatcttgtcctcttagagagc |
18022718 |
T |
|
| Q |
484 |
aatatatatggtgagataccttcaagctt |
512 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
18022719 |
aatatacatggtgagataccttcaagctt |
18022747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 196 - 521
Target Start/End: Original strand, 16676839 - 16677173
Alignment:
| Q |
196 |
atggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtga |
295 |
Q |
| |
|
||||||| |||||||||||||| | |||||||||||| || |||||| |||||||| ||||||||| |||||||||||||| | |||| | ||||| |
|
|
| T |
16676839 |
atggataatcttcattggctttttatactttcttccttgaagtatctcgaccttagtggacttgatcttcataaggaaaccaattggattcagaaagtga |
16676938 |
T |
|
| Q |
296 |
attcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
|| |||||||||||||||||||||| | ||||||| |||||||||||||||||| | ||| | || ||||||||||| ||||||||||| |
|
|
| T |
16676939 |
atacacttccttcactattagaattgcggttgagttcttgtaaattgaacaacttcatgctcaactcatctattgggtatttgaattcctcttcaattgt |
16677038 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaat |
486 |
Q |
| |
|
|||||||||||||||| ||||| || |||| ||| ||||| | |||||||| ||||| |||||||| ||||| |||| |||||||| ||||| ||| |
|
|
| T |
16677039 |
aactcttgatctttcttacaacaatttaacctttcagttactaaacgggtttttaaatctcaccaaagatatcaagcatcttgacctttcatggaataat |
16677138 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
16677139 |
atacatggtgagataccttcaagcttgttaaacct |
16677173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 19460988 - 19461128
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| |||||| |
|
|
| T |
19460988 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgaatttgatgtgataagatttccatccattcaacacaa |
19461087 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccc |
151 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
19461088 |
catcacacattcatctaaccttttctaccttgacttatccc |
19461128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 189 - 521
Target Start/End: Complemental strand, 14896777 - 14896436
Alignment:
| Q |
189 |
tctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaa |
288 |
Q |
| |
|
|||||||||||||| |||| ||||||||||| ||| ||||||||| |||||||||| ||||||| |||||||||| |||||| |||||| | ||||| |
|
|
| T |
14896777 |
tctgcacatggataatcttgattggctttctccacattcttccttgaaatatctcatccttagtggaattgatcttcacaaggaatccaattggcttcaa |
14896678 |
T |
|
| Q |
289 |
atagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtctt |
379 |
Q |
| |
|
|||||| | ||||||| |||||||||||| |||| |||| |||||| ||| |||||||||| | ||| | |||||||||||||||||||| |
|
|
| T |
14896677 |
gtagtgagtacacttccctcactattagaactacaattgactgattgcaaactgaacaacttcatgttcaactcatcttttgagtatttgaatttgtctt |
14896578 |
T |
|
| Q |
380 |
caattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttg |
479 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||| ||||||||||| | |||||||||||||||| | ||| |||||| ||||| ||| ||| || |
|
|
| T |
14896577 |
caattgtaattcttaatctttctttaaacaacttcacctctcatttgccaaatgggttttttaatctcacaaaaaatctcacctatctttacc-ttcatg |
14896479 |
T |
|
| Q |
480 |
gaa-caatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14896478 |
aaagcaatatacatggtgagataccttcaagcttgctaaacct |
14896436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 186 - 521
Target Start/End: Complemental strand, 17728070 - 17727727
Alignment:
| Q |
186 |
aactctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgttt |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | | |||||||||| ||||||||| |||| | || |
|
|
| T |
17728070 |
aactctgcacatggatagtcttcattggctttctccactttcttccttacaatatctcaacctcaatggaattgatcttcataaggaaacaaattggctt |
17727971 |
T |
|
| Q |
286 |
caaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgt |
376 |
Q |
| |
|
||| || ||||| ||||||||||||| ||||||||||||||||||| || || | ||||||||| |||| | ||||||||||||||||| |
|
|
| T |
17727970 |
caagtattgaatacacttccttcactgttagaattacagttgagtgggtgcaacctaaacaacttcctgatcaatccatctattgagtatttgaatttgt |
17727871 |
T |
|
| Q |
377 |
cttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttc |
476 |
Q |
| |
|
||||||||||||||||| ||||||| ||| | || |||||||| || | || ||| ||||||||||| |||||||||||| ||| | |||||| |
|
|
| T |
17727870 |
cttcaattgtaactctttatctttcaaacaacgatttcacctctcactt-cctggtggattttttaatctcaccaaagatctcacctatgttgaccttca |
17727772 |
T |
|
| Q |
477 |
ttggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| ||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
17727771 |
cgagagcaatatacatggtgagataccttctagcttggtaaacct |
17727727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 186 - 521
Target Start/End: Complemental strand, 19029299 - 19028956
Alignment:
| Q |
186 |
aactctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgttt |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | | |||||||||| ||||||||| |||| | || |
|
|
| T |
19029299 |
aactctgcacatggatagtcttcattggctttctccactttcttccttacaatatctcaacctcaatggaattgatcttcataaggaaacaaattggctt |
19029200 |
T |
|
| Q |
286 |
caaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgt |
376 |
Q |
| |
|
||| || ||||| ||||||||||||| ||||||||||||||||||| || || | ||||||||| |||| | ||||||||||||||||| |
|
|
| T |
19029199 |
caagtattgaatacacttccttcactgttagaattacagttgagtgggtgcaacctaaacaacttcctgatcaatccatctattgagtatttgaatttgt |
19029100 |
T |
|
| Q |
377 |
cttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttc |
476 |
Q |
| |
|
||||||||||||||||| ||||||| ||| | || |||||||| || | || ||| ||||||||||| |||||||||||| ||| | |||||| |
|
|
| T |
19029099 |
cttcaattgtaactctttatctttcaaacaacgatttcacctctcactt-cctggtggattttttaatctcaccaaagatctcacctatgttgaccttca |
19029001 |
T |
|
| Q |
477 |
ttggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| ||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
19029000 |
cgagagcaatatacatggtgagataccttctagcttggtaaacct |
19028956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 18164618 - 18164757
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||| |||| |||| |||| |||||| |
|
|
| T |
18164618 |
gtgagatgaatctttgtattctagaacttgagtttctcagtcacttggatttgagtcttaatgattttgatgtgataagaattacatcaattcaacacaa |
18164717 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18164718 |
cttcacacattcatctaaacttgtctaccttgacttatcc |
18164757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 187 - 521
Target Start/End: Original strand, 17949438 - 17949782
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttc-ctaaggaaaccaatttgttt |
285 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||| |||||||| |||| |||| |
|
|
| T |
17949438 |
actctgcacatggataatcttcattggctttctccactttcttccttaaattatctcaacctcggtggaattgatcttcaataaggaaaataattggttt |
17949537 |
T |
|
| Q |
286 |
caaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttg--------atga-gtatttgaatttgt |
376 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||| ||||| | | ||||| |||| |||||| ||| || | |||||||||||| | |
|
|
| T |
17949538 |
caagtagtgaattcactttcttcactattagaattaaagttgtttcactgtaacctgaataacttcttgattggaacgtctatcaggtatttgaatttat |
17949637 |
T |
|
| Q |
377 |
cttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttc |
476 |
Q |
| |
|
||||| ||||||||||| ||||| || ||||||||| ||||| ||||||| |||||||||| ||||| |||||||| ||| | ||| |||||| | |
|
|
| T |
17949638 |
cttcacttgtaactctttatcttgatgaaaacaacttcacctcccatttaccaaatgggtttttcaatctcaccaaagatatcacctctcttgaccttgc |
17949737 |
T |
|
| Q |
477 |
ttggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17949738 |
actaaataatatatatggtgagataccttcaagcttgctaaacct |
17949782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19375150 - 19375289
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||| ||||||| |||||| |
|
|
| T |
19375150 |
gtgagatgaatctttatattctagaacttgagtttctcagttacttggatttgagtttcaatgaatttgacgtgataagaattccgtccattcaacacaa |
19375249 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
| |||||||||||||||| ||| | | ||||||||||||| |
|
|
| T |
19375250 |
cttcacacattcatctaaccttttgttccttgacttatcc |
19375289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 19399176 - 19399311
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||| |||||||||||||| |||||| |
|
|
| T |
19399176 |
gtgagatgaatctctgtattctagaacttgagtttctcagttacttggatttgagtgagaatgaatttcatgtgataagaattccatccattcaacacaa |
19399275 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgactt |
146 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| |
|
|
| T |
19399276 |
tatcacacattcatctaaacttgtagactttgactt |
19399311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 19436336 - 19436474
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| |||| ||||||||| |||||| |
|
|
| T |
19436336 |
gtgagatgaatctttgtattctaaaacttgagtttcttagttacttggatttgagtgtgaatgattttgatgtgataagaatttcatccattcaacacaa |
19436435 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatc |
149 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
19436436 |
tatcacacattcatctaaacttctctaccttgacttatc |
19436474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 204 - 521
Target Start/End: Original strand, 18108067 - 18108393
Alignment:
| Q |
204 |
tcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcactt |
303 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||| |||| || ||||||||| |||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
18108067 |
tcttcattggctttcttcacattcttccttgaaatatctcagccttggtggagttgatcttcataaggaaaccaactggtttcaagtagtgaattcactt |
18108166 |
T |
|
| Q |
304 |
ccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttg--------atgag-tatttgaatttgtcttcaattgtaactcttg |
394 |
Q |
| |
|
||||||||||||||||||||||| ||| | ||| | || |||||| ||| || || |||||||||||||||||| ||||||||||| |
|
|
| T |
18108167 |
tcttcactattagaattacagttgtttgactataaccttaataacttcttgattggaacatctatcagatatttgaatttgtcttcacttgtaactctta |
18108266 |
T |
|
| Q |
395 |
atctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatgg |
494 |
Q |
| |
|
||||| || ||||||||| ||||| ||||||| |||||||||| ||||| |||| ||| ||| | ||| |||||| | ||| ||||||||||| |
|
|
| T |
18108267 |
atcttgatgaaaacaacttcacctcccatttaccaaatgggtttttcaatctcaccaatgatatcacctctcttgaccttgcgctgaataatatatatgg |
18108366 |
T |
|
| Q |
495 |
tgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
18108367 |
tgagataccttcaagcttgctaaacct |
18108393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 360 - 521
Target Start/End: Original strand, 17941747 - 17941908
Alignment:
| Q |
360 |
tgagtatttgaatttgtcttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctc |
459 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
17941747 |
tgagtatttgaatttgtcttcacttgtaactctttctctttctggaaacaatttcacctctcatatacctgatgggttttttaatctcaccaaagatctc |
17941846 |
T |
|
| Q |
460 |
aagtatctcgacctttcttggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
| ||||| |||||| || ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17941847 |
acttatcttgaccttcacgagagcaatatacatggtgagataccttcaagcttgctaaacct |
17941908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 18143710 - 18143843
Alignment:
| Q |
17 |
tgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaacatcac |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||||| |||||| |||||||||||||| |||||||||||| |
|
|
| T |
18143710 |
tgaatctttgtattctagaacttgagtttcttagttacttggatttgagattcaatgattttgatatgataagaattccatccattcaacacaacatcac |
18143809 |
T |
|
| Q |
117 |
acattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||| |
|
|
| T |
18143810 |
acattcctctaaacttgtctaccttgacttatcc |
18143843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 18102898 - 18103037
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||| ||||||||||||||||| | |||||||||||||| ||||||||||||||| |||| ||||| ||||||| |||||||||||||| |||||| |
|
|
| T |
18102898 |
gtgatatgaatctttgtattcttggacttgagtttctcaattacttggatttgagctggaatcattttgatgtgataagaattccatccattcaacacaa |
18102997 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18102998 |
catcacacattcatctaaacttgtctaccttgacttatcc |
18103037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19350865 - 19351004
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||| | | || |
|
|
| T |
19350865 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttgggtttgagtgagaatcattttgatgtgataactattccatccattcaaaaaaa |
19350964 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
19350965 |
catcacacattcctctaaacttgtctaccttgacttatcc |
19351004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19392593 - 19392732
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||| |||||| || ||| |
|
|
| T |
19392593 |
gtgagatgaatctttgtattctacaacttgagtttctaagttacttggatttgagcgggaatgattttgacgtgataagaattccagccattcaacgcaa |
19392692 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
19392693 |
catcacgcattcatctaaacttgcctaccttgacttatcc |
19392732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 187 - 521
Target Start/End: Original strand, 25462661 - 25463004
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttc |
286 |
Q |
| |
|
||||| |||||||||| |||||||||||||||| || | ||||||||||||||||||||||| | | |||||||||| ||||||||| |||| | ||| |
|
|
| T |
25462661 |
actcttcacatggataatcttcattggctttctccattatcttccttaaaatatctcaacctcaatgcaattgatcttcataaggaaactaattggcttc |
25462760 |
T |
|
| Q |
287 |
aaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcc---------catttgatgagtatttgaatttgtc |
377 |
Q |
| |
|
|| |||| | | ||| |||||||||| || || || ||| | |||| | |||||||||||| ||| | || ||||||||||||||| |
|
|
| T |
25462761 |
aagcagtgtctactctttcttcactattcgagttgcacttgcaagcttgtgatttgaacaacttcatgaccaaatcatctattgggtatttgaatttgtc |
25462860 |
T |
|
| Q |
378 |
ttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttct |
477 |
Q |
| |
|
||| || ||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| || |||||| ||| |||||| |||||||| |
|
|
| T |
25462861 |
ttcgcttttaactcttgatctttcttacaacaacttcacctctcatttacctgatggtttttttaatctctcaaaagatttcatgtatcttgacctttca |
25462960 |
T |
|
| Q |
478 |
tggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
| || ||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
25462961 |
tttaataatgtacatggtgacataccttcaagcttgctaaacct |
25463004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 18115421 - 18115561
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| | |||||||||||| |||||| |
|
|
| T |
18115421 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagctcaaatgattttgatgtgataagatttccatccattcaacacaa |
18115520 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccc |
151 |
Q |
| |
|
| |||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
18115521 |
cctcacacattcatctaaccttttccaccttgacttatccc |
18115561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 187 - 522
Target Start/End: Complemental strand, 24493807 - 24493463
Alignment:
| Q |
187 |
actctgcacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttc |
286 |
Q |
| |
|
||||| |||||||||| ||||||||||||| || |||||||||| || |||||||||||||||||| || ||||||| | |||||||||||| | ||| |
|
|
| T |
24493807 |
actcttcacatggataatcttcattggcttcctccactttcttcgttgaaatatctcaaccttagtggaatcgatcttcgtgaggaaaccaattggcttc |
24493708 |
T |
|
| Q |
287 |
aaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtc |
377 |
Q |
| |
|
|| |||| | |||||||||||||||||||||||| ||| ||||||||| | |||||||| | ||||| |||||||| ||||||||| |
|
|
| T |
24493707 |
aagaagtggctacacttccttcactattagaattacgtatgattgattgtaacctaaacaacttcatgatcaactcattttttgagtattcgaatttgtc |
24493608 |
T |
|
| Q |
378 |
ttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttct |
477 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||| | |||||| |||| ||| |||||||| || |||||||| ||| ||||| | |||||| |
|
|
| T |
24493607 |
ttcacttgtaactcttgatctttctgaaaacaacttcagctctcagttaccaaatgcattttttaacctcaccaaagatatcacctatcttggcctttcg |
24493508 |
T |
|
| Q |
478 |
tggaacaatatatatggtgagataccttcaagcttgctaaacctg |
522 |
Q |
| |
|
| ||| ||| |||| | |||||||||||||||||||||||| |
|
|
| T |
24493507 |
tttctcaaaatacatggcaacataccttcaagcttgctaaacctg |
24493463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 16676669 - 16676808
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||| | |||| |||||||||||||| ||| || |
|
|
| T |
16676669 |
gtgagatgaatctttgtattctagaacttgagtttctaatttacttggatttgagctggaatgaatttgacctaataagaattccatccattcaacaaaa |
16676768 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
| |||||||| ||||||| ||||| ||||||||||||||| |
|
|
| T |
16676769 |
cctcacacatgcatctaaccttgtctaccttgacttatcc |
16676808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 18022264 - 18022403
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| |||||| ||||||| ||||||||| |||| |||||| |
|
|
| T |
18022264 |
gtgagctgaatctttgtattcttgaacttgagtttcttagttatttggatttgagtcataatgaatttgatgtgataagaattccatctattcaacacaa |
18022363 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
||||||||| ||||||||| || | ||||||||||||||| |
|
|
| T |
18022364 |
catcacacactcatctaaatttttctaccttgacttatcc |
18022403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19419451 - 19419590
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| ||| |||| | ||||||| |||||||||||||| |||||| |
|
|
| T |
19419451 |
gtgagatgaatctttgtatttttgaacttgagtttcttagttacttggatttgagtcataataaatttaatgtgataagaattccatccattcaacacaa |
19419550 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||||||||||||| ||||| | |||||||||||| |
|
|
| T |
19419551 |
catcacacattcatctaaccttgtgaaacttgacttatcc |
19419590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 19413660 - 19413797
Alignment:
| Q |
13 |
gagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaaca |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||| ||||||| | ||| |||||| | |
|
|
| T |
19413660 |
gagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagccacaattattttggtgagataagaattccaactattaaacacaata |
19413759 |
T |
|
| Q |
113 |
tcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
19413760 |
tcacacattcatctaaacttgtttaccttgacttatcc |
19413797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 193 - 521
Target Start/End: Original strand, 19424233 - 19424570
Alignment:
| Q |
193 |
cacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatag |
292 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||| || | |||| |||||||| ||||||||| |||| |||| ||||| | ||||| || |
|
|
| T |
19424233 |
cacatggataatcttgattggctttcttcactttcttcgttggagaatctttaccttagtggaattgatctttctaaagaaagcaattggattcaaggag |
19424332 |
T |
|
| Q |
293 |
tgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgtcttcaat |
383 |
Q |
| |
|
| | | ||||||||||||||||| ||||||| | |||||||| ||| ||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
19424333 |
tcagtacacttccttcactattacaattacaaataagtgattggaaaccaaacaacttcatgatcaacccatcaattgagtatttgaatttgtcttcaat |
19424432 |
T |
|
| Q |
384 |
tgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaac |
483 |
Q |
| |
|
|||||| |||||||||||| ||||| || |||||||||||| |||||||||||||||||| |||||||||||| ||||| ||| || | |
|
|
| T |
19424433 |
tgtaacacttgatctttctttcaacaatttcgcctctcatttacctgatgggttttttaatctcaccaaagatctcacctatcttagacttcaccagagc |
19424532 |
T |
|
| Q |
484 |
aatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
19424533 |
aatatacatggtgggataccttcaagcttgctaaacct |
19424570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 18015562 - 18015698
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||| |||||||||||||||||| | |||| |||||| ||||||| ||||||||||||| | |||| |
|
|
| T |
18015562 |
gtgagatgaatttttgtattttagaacttgaatttcttagttacttggatttgagtttcaatgaatttgatgtgataagtattccatccattcaaaacaa |
18015661 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgactta |
147 |
Q |
| |
|
|||||||||||| ||||| ||| | |||||||||||| |
|
|
| T |
18015662 |
catcacacattcctctaaccttttctaccttgactta |
18015698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 25462506 - 25462646
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||| |||| || | |||| |||||| || ||| |||||| |
|
|
| T |
25462506 |
gtgagatgaatctatgtgttctagaacttgagtttctcagttacttggatttaagtgataatgaatttaacatcataagtattccagcctttcaacacaa |
25462605 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccc |
151 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
25462606 |
catcacacattcatctaaacttgactatcttgacttatccc |
25462646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 521
Target Start/End: Original strand, 19436738 - 19436984
Alignment:
| Q |
284 |
ttcaaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaattt |
374 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| |||| | | ||||||| ||||| |
|
|
| T |
19436738 |
ttcaaatagtgaattcacttccttcactattagaattaaagttgagtgggtgcagcctgaacaacttcgtgattaatccatctattcagtatttaaattt |
19436837 |
T |
|
| Q |
375 |
gtcttcaattgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctt |
474 |
Q |
| |
|
||||||| ||||||||||| ||||||| | ||| | || |||||||| |||| ||||||||||||||||| |||||||||||| | ||| ||||| |
|
|
| T |
19436838 |
gtcttcacttgtaactctttatctttcagataacgatttcacctctcacttaccggatgggttttttaatctcaccaaagatctcacctctctttacctt |
19436937 |
T |
|
| Q |
475 |
tcttggaacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|| | |||||||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
19436938 |
tcgtttaacaatattcatggggagataccttctagcttgctaaacct |
19436984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 19380361 - 19380501
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||| ||||| ||||||| |||||||||||||| ||| || |
|
|
| T |
19380361 |
gtgagatgaatctttgtattcttgaacttaagtttcttagttacttggatttgagtgaaaataattttgatgtgataagaattccatccattcaacaaaa |
19380460 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccc |
151 |
Q |
| |
|
||| ||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
19380461 |
cattacacattcatctatccttttgcaccttgacttatccc |
19380501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 14896934 - 14896795
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||| |||||| || || |||||| |
|
|
| T |
14896934 |
gtgagatgagtctttgtattctcgaactggagtttctcagttacttagatttgagtatgaatcattttgatgtgataagtattccagtcactcaacacaa |
14896835 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
14896834 |
catcacacattcatctagccttttctaccttgacttatcc |
14896795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 18146286 - 18146425
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| | |||||||||||||||| ||| ||||| |||||| |||||||||||||| |||||| |
|
|
| T |
18146286 |
gtgagatgaatctttgtattcttgaacttgagtttcttaattacttggatttgagtgataattattttgatatgataagaattccatccattcaacacaa |
18146385 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
||||||||| |||||| ||| | ||||||||||||||| |
|
|
| T |
18146386 |
tatcacacatatatctaaccttttgtaccttgacttatcc |
18146425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 18107908 - 18108046
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||| || |||||||| ||||| ||||| || |||| |||||||||||||| |||||| |
|
|
| T |
18107908 |
gtgagatgaatctttgtattcttgaccttgagtttctcagttatttagatttgagctggaatgattttgatgtcataagaattccatccattcaacacaa |
18108007 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatc |
149 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
18108008 |
tatcacacattcatctaacctttcgcaccttgacttatc |
18108046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 196 - 521
Target Start/End: Original strand, 19392769 - 19393103
Alignment:
| Q |
196 |
atggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtga |
295 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| || ||||||||| ||| ||| |||||||||| |||||||||||||| | ||||| ||||| |
|
|
| T |
19392769 |
atggatagtcttgattggctttctccactttcttcattgaaatatctcttcctaagtggaattgatcttcataaggaaaccaattggcttcaagcagtga |
19392868 |
T |
|
| Q |
296 |
attcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgtcttcaattgt |
386 |
Q |
| |
|
| |||| ||||||| ||||||||||| || ||||| ||||| | | |||||| |||| | |||||||||||||||||||||| |||| |
|
|
| T |
19392869 |
gtatactttcttcactgttagaattacaattaagtgaatgtaacctcgaaaacttcaagatcaagccatcttttgagtatttgaatttgtcttcacttgt |
19392968 |
T |
|
| Q |
387 |
aactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaat |
486 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| || ||| | ||||||||||||||| | ||| | || || || || ||||| || ||| |
|
|
| T |
19392969 |
aactcttgatctttcttacaacaacttcacctccaatatacctaatgggttttttaatcgtaccacatatgccacctaccttcaccttaaggagagcaac |
19393068 |
T |
|
| Q |
487 |
atatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19393069 |
atatatggtgagataccttcaagtttgctaaacct |
19393103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 17728224 - 17728085
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||| |||||| | |||| |||||||||||||| ||||| |
|
|
| T |
17728224 |
gtgagatgaatctttgtattcttgaacttgagtttcttagttacttggatttgagcttcaataaatttgatgccataagaattccatccattcatcacaa |
17728125 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||| |||||| || ||| | ||| |||||||||| |
|
|
| T |
17728124 |
catcacacgttcatcgaaccttttgtacactgacttatcc |
17728085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 19029453 - 19029314
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||| |||||| | |||| |||||||||||||| ||||| |
|
|
| T |
19029453 |
gtgagatgaatctttgtattcttgaacttgagtttcttagttacttggatttgagcttcaataaatttgatgccataagaattccatccattcatcacaa |
19029354 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
|||||||| |||||| || ||| | ||| |||||||||| |
|
|
| T |
19029353 |
catcacacgttcatcgaaccttttgtacactgacttatcc |
19029314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 24493942 - 24493816
Alignment:
| Q |
31 |
ctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaacatcacacattcatctaaac |
130 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| || | ||||| |||||| |||||| |||||| | |||||||||||||||||||||||| |
|
|
| T |
24493942 |
ctagaacttgagtttcttagttacttggacttgagcgataacgattttgatttgataagtattccaaccattcaaaacaacatcacacattcatctaaac |
24493843 |
T |
|
| Q |
131 |
ttgtataccttgacttatccctcctca |
157 |
Q |
| |
|
|||| |||||||||||||||| ||||| |
|
|
| T |
24493842 |
ttgtctaccttgacttatcccccctca |
24493816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 19419603 - 19419684
Alignment:
| Q |
193 |
cacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaa |
274 |
Q |
| |
|
|||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
19419603 |
cacatgtataatcttgattggctttctccactttcttccttaaaatatctcaacctcggtggaattgatcttcataaggaaa |
19419684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 481 - 521
Target Start/End: Original strand, 18103332 - 18103372
Alignment:
| Q |
481 |
aacaatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18103332 |
aacaatatatatggtgagataccttcaagcttgctaaacct |
18103372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 19424045 - 19424083
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctca |
49 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
19424045 |
gtgagatcaatctttgtattctcgaacttgagtttctca |
19424083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 521
Target Start/End: Original strand, 18144146 - 18144183
Alignment:
| Q |
484 |
aatatatatggtgagataccttcaagcttgctaaacct |
521 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18144146 |
aatatatatggtgacttaccttcaagcttgctaaacct |
18144183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 141; Significance: 1e-73; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 14 - 460
Target Start/End: Complemental strand, 13667415 - 13666987
Alignment:
| Q |
14 |
agatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaacat |
113 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| || ||||||||||||| |||| |||||| ||||||| |||| ||||||||| ||||||||| |
|
|
| T |
13667415 |
agatgaatctttgtattctagaacttaagtttctcagctatttggatttgagtcataatgaatttgatgtgataaaaatttcatccattcaacacaacat |
13667316 |
T |
|
| Q |
114 |
cacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagnnnnnnngaaaactctgcacatggatagtcttcattgg |
213 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| || ||| |||| |||| || || | ||| ||||| |||| |||||||||| |
|
|
| T |
13667315 |
cacaaattcatctaaacttgtctaccttgacttat-ccgcct--acaattttg---at------------aatattcttcacattgataatcttcattgg |
13667234 |
T |
|
| Q |
214 |
ctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcactat |
313 |
Q |
| |
|
||||| || |||||||||| ||||||||| ||| | ||||||||||| ||||||||| |||| | | ||| |||||||| |||||||||||| || |
|
|
| T |
13667233 |
ttttctccattttcttccttgaaatatctccggtttaatggcattgatcttcataaggaaactaattggctccaagtagtgaatacacttccttcacaat |
13667134 |
T |
|
| Q |
314 |
tagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttctggaaacaactt |
413 |
Q |
| |
|
||||||||| |||||| | |||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||| ||||||||| |
|
|
| T |
13667133 |
tagaattacggttgagaggttgtaacctgaacaacttcccatctcttgagtatttgaatttgtcttcgctggtaactcttgatctttctgaaaacaactt |
13667034 |
T |
|
| Q |
414 |
tacctctcatttacttgatgggttttttaatctttccaaagatctca |
460 |
Q |
| |
|
||||||||| ||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
13667033 |
cacctctcatatacctaatgagttttttaatctcaccaaaaatctca |
13666987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 204 - 384
Target Start/End: Original strand, 2509635 - 2509821
Alignment:
| Q |
204 |
tcttcattggctttcttcactttcttccttaaaatatctcaacctt------agtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaat |
297 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||| | | ||| |||||| | |
|
|
| T |
2509635 |
tcttcattggctttctccactttcttccttaaaatatctcaaccttggtttcagtaccattgatcttcataagaaaaccaattgggtacaagtagtgagt |
2509734 |
T |
|
| Q |
298 |
tcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaatt |
384 |
Q |
| |
|
||||||||||||||||||| ||| ||||| ||| | ||| |||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
2509735 |
acacttccttcactattagagttaaggttgaatgactataacttgaacaacttcccatctatagagtatttgaatttgtcttcaatt |
2509821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 384
Target Start/End: Original strand, 2509842 - 2509936
Alignment:
| Q |
290 |
tagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaatt |
384 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||| ||||| ||| | ||| |||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
2509842 |
tagtgagtacacttccttcactattagagttaaggttgaatgactataacttgaacaacttcccatctatagagtatttgaatttgtcttcaatt |
2509936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 11 - 521
Target Start/End: Original strand, 4856 - 5357
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||||||| |||| | ||||| || || |||||| |
|
|
| T |
4856 |
gtgagatgaatctttgtattctagaacttgagtttttgagttacttggatttgagctacaatgattttgacgttataagagttccaatcactcaacacaa |
4955 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagnnnnnnngaaaactctgcacatggatagtcttcat |
210 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||| ||| ||||| || | ||| |||||||| |||||||||| ||||||| |
|
|
| T |
4956 |
catcacacgttcatctaaacttgtctaccttgacttagcccccctca------tttttgat------------aaaactcttcacatggataatcttcat |
5037 |
T |
|
| Q |
211 |
tggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcac |
310 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| |||||||||||| | | ||||| ||| | | | |||||||||| |
|
|
| T |
5038 |
tggctttcttcactttcatccttgaaatatctcatccttagtgggattgatcttcgtaaggaaaccaactggcttcaagcagtaagtacccttccttcac |
5137 |
T |
|
| Q |
311 |
tattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttc |
401 |
Q |
| |
|
||||||||||||| ||||| | |||||| | ||||||||| |||| | ||||||||| |||||||||||| ||||||||||| ||||||| |
|
|
| T |
5138 |
tattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctattgagtatttcaatttgtcttcacttgtaactctttatctttc |
5237 |
T |
|
| Q |
402 |
tggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtgagata |
501 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| | ||| |||||| | || ||||||||||| |||||| |
|
|
| T |
5238 |
tggaaacaactttacctccaatttaccaaatgggttttttaatctaaccaaagatatcacctctcttgaccttgcgcaaaataatatatatggcgagata |
5337 |
T |
|
| Q |
502 |
ccttcaagcttgctaaacct |
521 |
Q |
| |
|
||||| ||| |||||||||| |
|
|
| T |
5338 |
ccttctagcatgctaaacct |
5357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 130; Significance: 4e-67; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 193 - 518
Target Start/End: Original strand, 15531977 - 15532302
Alignment:
| Q |
193 |
cacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatag |
292 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||||| ||||| |||||||||||||||| | |||||||||| |||||||||||| | | ||||| || |
|
|
| T |
15531977 |
cacatggataatcttgattggctttctccactttcatccttgaaatatctcaaccttaattggattgatcttcataaggaaaccaactggattcaagcag |
15532076 |
T |
|
| Q |
293 |
tgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttcccatttgatgagtatttgaatttgtcttcaattgtaactct |
392 |
Q |
| |
|
|| | ||||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||| |
|
|
| T |
15532077 |
agagtacacttccttcactattagatttaaggttgagtgactgtaaactgaacaacttcccatctatcgagtatttgaatttgtcttcacttgtaactct |
15532176 |
T |
|
| Q |
393 |
tgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatat |
492 |
Q |
| |
|
|||||||||| | |||||||| | | |||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||| || |||||| | |
|
|
| T |
15532177 |
tgatctttcttggaacaacttcagccatcatttaccaaatgggttttttaatctttccaaatatctcaattatcttgacctttcaaaaaataatatactt |
15532276 |
T |
|
| Q |
493 |
ggtgagataccttcaagcttgctaaa |
518 |
Q |
| |
|
| ||||||||||||||| |||||||| |
|
|
| T |
15532277 |
gatgagataccttcaagtttgctaaa |
15532302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 193 - 518
Target Start/End: Complemental strand, 2710959 - 2710625
Alignment:
| Q |
193 |
cacatggatagtcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatag |
292 |
Q |
| |
|
||||| |||| |||| ||||||||||| |||||||||| || |||||||||||||| || |||||||||| ||| |||||||||| | ||||||||| |
|
|
| T |
2710959 |
cacatagataatcttaattggctttctccactttcttctttgaaatatctcaacctcagcggtattgatcttcataaagaaaccaattggcttcaaatag |
2710860 |
T |
|
| Q |
293 |
tgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaactt---------cccatttgatgagtatttgaatttgtcttcaat |
383 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||| | ||||||| | | |||||| ||| | | || |||||||||||||||||| | |
|
|
| T |
2710859 |
tgaatacacttccttcactattagaagtacaattgtctttttgtaaactaagcaacttcatgatcaacccgtctattgcatatttgaatttgtcttcact |
2710760 |
T |
|
| Q |
384 |
tgtaactcttgatctttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaac |
483 |
Q |
| |
|
| |||||||||| |||||| | |||||||| ||||||| ||||| |||||||||||||||| ||||| | |||| ||||| |||||||| | | | |
|
|
| T |
2710759 |
tataactcttgaactttcttggaacaacttcacctctcctttaccaaatgggttttttaatctcaccaaacacatcaactatcttgacctttcatatagc |
2710660 |
T |
|
| Q |
484 |
aatatatatggtgagataccttcaagcttgctaaa |
518 |
Q |
| |
|
|||||| |||||||||||||||| |||||| |||| |
|
|
| T |
2710659 |
aatatacatggtgagataccttctagcttgttaaa |
2710625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 15531819 - 15531961
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattcca---ca |
107 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||| ||||| ||| ||| ||||||||||||| | | |
|
|
| T |
15531819 |
gtgagatgaatctttgtattctaaaacttgagtttcttagttacttcgatttgagtcggaatgattttgatgtgctaagcattccatccattcaaaataa |
15531918 |
T |
|
| Q |
108 |
caacatcacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
||| ||||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
15531919 |
caatatcacacattcatctaaccttttgtaccttgacttatcc |
15531961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 2711058 - 2710997
Alignment:
| Q |
82 |
gtgataataattccatccattccacacaacatcacacattcatctaaacttgtataccttga |
143 |
Q |
| |
|
||||||| |||||| || ||| |||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
2711058 |
gtgataactattccacccgttcaacacaacatcacacatgcatctaaccttatataccttga |
2710997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2156 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold2156
Description:
Target: scaffold2156; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 456
Target Start/End: Complemental strand, 474 - 39
Alignment:
| Q |
11 |
gtgagatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||||||| |||| | ||||| || || |||||| |
|
|
| T |
474 |
gtgagatgaatctttgtattctagaacttgagtttttgagttacttggatttgagctacaatgattttgacgttataagagttccaatcactcaacacaa |
375 |
T |
|
| Q |
111 |
catcacacattcatctaaacttgtataccttgacttatccctcctcaacaaatttgtcgatttagnnnnnnngaaaactctgcacatggatagtcttcat |
210 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||| ||||| || | ||| |||||||| |||||||||| ||||||| |
|
|
| T |
374 |
catcacacgttcatctaaacttgtctaccttgacttatcccccctca------tttttgat------------aaaactcttcacatggataatcttcat |
293 |
T |
|
| Q |
211 |
tggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcacttccttcac |
310 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| ||||| | |||||||||| |||||||||||| | | ||||| ||| | | | ||||||||| |
|
|
| T |
292 |
tggctttcttcactttcatcctt-aaatatctcatccttattgggattgatcttcgtaaggaaaccaactggcttcaagcagtaagtacctttccttcac |
194 |
T |
|
| Q |
311 |
tattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttgatgagtatttgaatttgtcttcaattgtaactcttgatctttc |
401 |
Q |
| |
|
||||||||||||| ||||| | |||||| | ||||||||| |||| | ||||||||| |||||||||||| ||||||||||| ||||||| |
|
|
| T |
193 |
tattagaattacaactgagttactgtaaactaaacaacttcatgatcaatccatctattgagtatttcaatttgtcttcacttgtaactctttatctttc |
94 |
T |
|
| Q |
402 |
tggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagat |
456 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |||||||| |
|
|
| T |
93 |
tggaaacaactttacctccaatttaccaaatgggttttttaatctaaccaaagat |
39 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 204 - 513
Target Start/End: Original strand, 8459107 - 8459422
Alignment:
| Q |
204 |
tcttcattggctttcttcactttcttccttaaaatatctcaaccttagtaacattgatcttcctaaggaaaccaatttgtttcaaatagtgaattcactt |
303 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| |||||||||| | | |||||||||| ||||||||| |||| | ||||| |||| | ||||| |
|
|
| T |
8459107 |
tcttcaatggctttctccactttcttccttaaaaaatctcaacctcaatggaattgatcttcataaggaaactaattggcttcaagcagtggctacactt |
8459206 |
T |
|
| Q |
304 |
ccttcactattagaattacagttgagtgattgtaaattgaacaactt------cccatttgatgagtatttgaatttgtcttcaattgtaactcttgatc |
397 |
Q |
| |
|
|||| |||||||| ||||| || ||| | |||||| |||||||||| ||||| | |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8459207 |
tcttccctattagagttacacttaagtaagtgtaaactgaacaactttatcaacccatctcttgagtatttgaatttgtcttcacttgtaactcttgatc |
8459306 |
T |
|
| Q |
398 |
tttctggaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatctcaagtatctcgacctttcttggaacaatatatatggtga |
497 |
Q |
| |
|
||||| | |||||||| || |||| ||||| | |||||||||||||||| |||||||| ||| ||||| |||||||| | |||||||||| || |
|
|
| T |
8459307 |
tttcttggaacaacttcacatctcctttacctaatgggttttttaatctgaccaaagatatcacctatcttgacctttcggtttgccatatatatggcga |
8459406 |
T |
|
| Q |
498 |
gataccttcaagcttg |
513 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
8459407 |
gatgccttcaagcttg |
8459422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 8458944 - 8459080
Alignment:
| Q |
14 |
agatgaatctttgtattctagaacttgagtttctcagttacttggatttgagtctgaatgtatttgacgtgataataattccatccattccacacaacat |
113 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||| ||||||||||||||||| | || |||||| ||||||| ||||||||| |||| ||||||||| |
|
|
| T |
8458944 |
agatcaatctttccattctagaacttgagtttctgagttacttggatttgagcttacataaatttgatgtgataagaattccatcgattcaacacaacat |
8459043 |
T |
|
| Q |
114 |
cacacattcatctaaacttgtataccttgacttatcc |
150 |
Q |
| |
|
||||||| ||||||| ||| | |||||||||||||| |
|
|
| T |
8459044 |
cacacatgcatctaaccttttgcaccttgacttatcc |
8459080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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