View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11620_low_5 (Length: 249)
Name: NF11620_low_5
Description: NF11620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11620_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 27746953 - 27747175
Alignment:
| Q |
18 |
agtatacgacataaaaattcattataattagagagaaaataacttagaatatttttaacttgttgaatgtagttgtgtagaaatatgtttgtcgtaatac |
117 |
Q |
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| T |
27746953 |
agtatacgacataaaaattcattataattagagagaaaataacttagaatttttttaacttgttgaatgtagttgcatagaaatatgtttgtcgtaatac |
27747052 |
T |
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| Q |
118 |
taaatacacaaaaaagggaatgattgagagatgaaaacaaagt----tacatggacacagattcctggttttggggtcaatttgaatgtgattttcctat |
213 |
Q |
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||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
27747053 |
taaatacacaa-----ggaatgattgagagatgaaaacaaagttacatacatggacacagattcctggttttggggtcaatctgaatgtgattttcctat |
27747147 |
T |
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| Q |
214 |
gttagaaataactaaggccccctttgct |
241 |
Q |
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||||||||||||||||||||| |||||| |
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| T |
27747148 |
gttagaaataactaaggccccttttgct |
27747175 |
T |
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