View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11621_high_35 (Length: 234)

Name: NF11621_high_35
Description: NF11621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11621_high_35
NF11621_high_35
[»] chr1 (8 HSPs)
chr1 (17-217)||(12458753-12458952)
chr1 (45-147)||(20129620-20129722)
chr1 (45-115)||(49508558-49508628)
chr1 (76-152)||(23809458-23809534)
chr1 (45-115)||(8771249-8771319)
chr1 (46-136)||(33978177-33978267)
chr1 (45-115)||(45432813-45432883)
chr1 (100-136)||(39501121-39501157)
[»] chr6 (5 HSPs)
chr6 (17-217)||(16863156-16863355)
chr6 (14-170)||(30975988-30976141)
chr6 (14-170)||(30982427-30982580)
chr6 (14-170)||(30988591-30988744)
chr6 (73-136)||(10158976-10159039)
[»] chr4 (2 HSPs)
chr4 (17-217)||(53985839-53986038)
chr4 (73-136)||(42327924-42327987)
[»] scaffold0010 (1 HSPs)
scaffold0010 (32-115)||(236638-236719)
[»] chr8 (5 HSPs)
chr8 (73-136)||(9180752-9180815)
chr8 (73-136)||(11629496-11629559)
chr8 (71-121)||(32230017-32230067)
chr8 (101-138)||(5792151-5792188)
chr8 (100-136)||(34752738-34752774)
[»] chr2 (2 HSPs)
chr2 (73-136)||(10748046-10748109)
chr2 (45-115)||(43115040-43115110)
[»] scaffold0996 (1 HSPs)
scaffold0996 (46-136)||(1543-1633)
[»] chr7 (3 HSPs)
chr7 (45-115)||(34762682-34762752)
chr7 (45-115)||(34764095-34764164)
chr7 (91-135)||(31802462-31802506)
[»] chr5 (2 HSPs)
chr5 (101-136)||(13020970-13021005)
chr5 (101-136)||(13092494-13092529)
[»] chr3 (2 HSPs)
chr3 (80-152)||(14737331-14737403)
chr3 (76-132)||(43892110-43892166)


Alignment Details
Target: chr1 (Bit Score: 169; Significance: 9e-91; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 12458753 - 12458952
Alignment:
Q  17 agaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12458753 agaatacaaagtaagcggtacattatag-aaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 12458851  T
Q  117 aacatacgatactacaaagttggaattactaaacaataaatctctacactgtgatacagttttgccaaactcgttaaggtaaacaaatgaagagttgatg 216  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  12458852 aacatacgacaatacaaagtcggaattactaaacaataaatctctacactgtgatacaatgttgccaaactcgttaaggtaaacaaaagaagagttgatg 12458951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 20129722 - 20129620
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagttggaatta 144  Q
    ||||| |||||||||||  || ||  |||||||| | || ||||| ||||| ||| |||| ||||||||||||| |||||| |||||||||| || ||||    
T  20129722 gaaaacatgggggctagggtgtgataaggatgctattgcaatgttatgagcaaccttattagcttgcctccgaatatacgacactacaaagtcgggatta 20129623  T
Q  145 cta 147  Q
    |||    
T  20129622 cta 20129620  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 49508628 - 49508558
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    |||||||||||||||||  |||||  |||| |||||||||||||| ||||| ||| |||||| ||||||||    
T  49508628 gaaaatatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcc 49508558  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 23809534 - 23809458
Alignment:
Q  76 gctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagttggaattactaaacaa 152  Q
    ||||| || ||||| ||||| || |||||||||||||||| |||| |||| |||||| ||| ||||||||| |||||    
T  23809534 gctcttgcaatgttatgagccacactatttgcttgcctcctaacaaacgacactacatagtcggaattacttaacaa 23809458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 8771249 - 8771319
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    |||||||||||||||||  |||||  ||||  ||||||||||||| ||||| ||| ||||||||| |||||    
T  8771249 gaaaatatgggggctagggtgggataaggaaactctagctatgttatgagctaccttatttgcttacctcc 8771319  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 33978177 - 33978267
Alignment:
Q  46 aaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||||||||  ||  |  |||| |||||||| ||  | ||||| |||||||| ||||||||||||||||| || ||||||||||    
T  33978177 aaaatatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctccgaacatatgacactacaaagt 33978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 45432883 - 45432813
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    ||||||| |||||||||  |||||  |||| |||||||||||||| ||||| ||| |||||| ||||||||    
T  45432883 gaaaatacgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcc 45432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 39501157 - 39501121
Alignment:
Q  100 ctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  39501157 ctatttgcttgcctcctaacatacgacactacaaagt 39501121  T

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Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 16863355 - 16863156
Alignment:
Q  17 agaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16863355 agaatacaaagtaagcggtacattatag-aaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 16863257  T
Q  117 aacatacgatactacaaagttggaattactaaacaataaatctctacactgtgatacagttttgccaaactcgttaaggtaaacaaatgaagagttgatg 216  Q
    ||||||||| |||||||||| ||||||  |||||||||| |||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||    
T  16863256 aacatacgacactacaaagtcggaattggtaaacaataagtctctacactgtgatacaatgttgccaaactcgttaagttaaacaaaagaagagttgatg 16863157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 30975988 - 30976141
Alignment:
Q  14 cagagaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcct 113  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||| |||||||    
T  30975988 cagagaatacaaagtaagtggtacattatag-aaaatatgggg-ctagtttgagaataggatgctctagctatattgtgagtgaccctatttacttgcct 30976085  T
Q  114 ccgaacatacgatactacaaagttggaattactaaacaataaatctctacactgtga 170  Q
    ||||||||| || |||||||||  |||||| ||||||||||||||||||||| ||||    
T  30976086 ccgaacataagacactacaaag-cggaatttctaaacaataaatctctacaccgtga 30976141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 30982427 - 30982580
Alignment:
Q  14 cagagaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcct 113  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||| |||||||    
T  30982427 cagagaatacaaagtaagtggtacattatag-aaaatatgggg-ctagtttgagaataggatgctctagctatattgtgagtgaccctatttacttgcct 30982524  T
Q  114 ccgaacatacgatactacaaagttggaattactaaacaataaatctctacactgtga 170  Q
    ||||||||| || |||||||||  |||||| ||||||||||||||||||||| ||||    
T  30982525 ccgaacataagacactacaaag-cggaatttctaaacaataaatctctacaccgtga 30982580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 30988591 - 30988744
Alignment:
Q  14 cagagaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcct 113  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||| |||||||    
T  30988591 cagagaatacaaagtaagtggtacattatag-aaaatatgggg-ctagtttgagaataggatgctctagctatattgtgagtgaccctatttacttgcct 30988688  T
Q  114 ccgaacatacgatactacaaagttggaattactaaacaataaatctctacactgtga 170  Q
    ||||||||| || |||||||||  |||||| ||||||||||||||||||||| ||||    
T  30988689 ccgaacataagacactacaaag-cggaatttctaaacaataaatctctacaccgtga 30988744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 10158976 - 10159039
Alignment:
Q  73 gatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||| || || ||||| || |||||||||||||||| ||||||||| ||||||||||    
T  10158976 gatgctctagcaatattatgagcaactctatttgcttgcctcctaacatacgacactacaaagt 10159039  T

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Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 53985839 - 53986038
Alignment:
Q  17 agaatacaaagtaagcggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 116  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53985839 agaatgcaaagtaagcggtacattatag-aaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccg 53985937  T
Q  117 aacatacgatactacaaagttggaattactaaacaataaatctctacactgtgatacagttttgccaaactcgttaaggtaaacaaatgaagagttgatg 216  Q
    ||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||    
T  53985938 aacatacgacaatacaaagtcggaattaataaacaataaatctctacactgtgatacaatgttgccaaactcgttaagataaacaaaagaagagttgatg 53986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 42327924 - 42327987
Alignment:
Q  73 gatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||| || || ||||| || |||||||||||||||| ||||||||| ||||||||||    
T  42327924 gatgctctagcaatattatgagcaactctatttgcttgcctcctaacatacgacactacaaagt 42327987  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 236638 - 236719
Alignment:
Q  32 cggtacattataggaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    |||||||| |||| |||||||||||||||| | ||||  |||| |||||||||||||| ||||| ||| |||||||||||||||    
T  236638 cggtacatcatag-aaaatatgggggctaggt-gggataaggaagctctagctatgttatgagctaccttatttgcttgcctcc 236719  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 9180752 - 9180815
Alignment:
Q  73 gatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||| || || ||||| || |||||||||||||||| ||||||||| ||||||||||    
T  9180752 gatgctctagcaatattatgagcaactctatttgcttgcctcctaacatacgacactacaaagt 9180815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 11629559 - 11629496
Alignment:
Q  73 gatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||| ||  | ||||| || |||||||||||||||| ||||||||| ||||||||||    
T  11629559 gatgctctagcaatactatgagcaactctatttgcttgcctcctaacatacgacactacaaagt 11629496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 32230017 - 32230067
Alignment:
Q  71 aggatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacat 121  Q
    |||| |||||||||||  ||||||||||||||||| ||| |||||||||||    
T  32230017 aggaagctctagctatagtgtgagcgaccctatttacttacctccgaacat 32230067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 5792188 - 5792151
Alignment:
Q  101 tatttgcttgcctccgaacatacgatactacaaagttg 138  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  5792188 tatttgcttggctccgaacatacgacactacaaagttg 5792151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 34752738 - 34752774
Alignment:
Q  100 ctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  34752738 ctatttgcttgcctcctaacatacgacactacaaagt 34752774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 10748109 - 10748046
Alignment:
Q  73 gatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||| || || ||||| || |||||||||||||||| ||||||||| ||||||||||    
T  10748109 gatgctctagcaatattatgagcaactctatttgcttgcctcctaacatacgacactacaaagt 10748046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 43115110 - 43115040
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    |||||||||||||||||  |||||  |||| |||||||||||||| ||||| ||| |||||| ||||||||    
T  43115110 gaaaatatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcc 43115040  T

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Target: scaffold0996 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 1543 - 1633
Alignment:
Q  46 aaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||||||||  ||  |  |||| |||||||| ||  | ||||| |||||||| |||||||||||||||||||| ||||||||||    
T  1543 aaaatatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctccgaacatacgacactacaaagt 1633  T

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Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 34762682 - 34762752
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    |||||||||||||||||  |||||  |||| |||||||||||||| ||||| ||| |||||||||| ||||    
T  34762682 gaaaatatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgcttgtctcc 34762752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 34764164 - 34764095
Alignment:
Q  45 gaaaatatgggggctagattgggaataggatgctctagctatgttgtgagcgaccctatttgcttgcctcc 115  Q
    ||||||||||||||||| | ||||  |||| |||||||||||||| ||||| ||| |||||||||| ||||    
T  34764164 gaaaatatgggggctaggt-gggataaggaagctctagctatgttatgagctaccttatttgcttgactcc 34764095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 31802506 - 31802462
Alignment:
Q  91 tgagcgaccctatttgcttgcctccgaacatacgatactacaaag 135  Q
    ||||| ||| |||| |||||||||||||||||||| |||||||||    
T  31802506 tgagcaaccttattagcttgcctccgaacatacgacactacaaag 31802462  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 13020970 - 13021005
Alignment:
Q  101 tatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13020970 tatttgcttgcctccgaacatacgacactacaaagt 13021005  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 13092494 - 13092529
Alignment:
Q  101 tatttgcttgcctccgaacatacgatactacaaagt 136  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13092494 tatttgcttgcctccgaacatacgacactacaaagt 13092529  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 14737403 - 14737331
Alignment:
Q  80 tagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactacaaagttggaattactaaacaa 152  Q
    |||| ||||| ||||| || |||||||||||||||| |||| |||| |||||| ||| || |||||| |||||    
T  14737403 tagcaatgttatgagccacactatttgcttgcctccaaacaaacgaaactacatagtcggcattacttaacaa 14737331  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 43892166 - 43892110
Alignment:
Q  76 gctctagctatgttgtgagcgaccctatttgcttgcctccgaacatacgatactaca 132  Q
    |||||||| ||||| ||||| || |||||||||||||||| |||| |||| ||||||    
T  43892166 gctctagcaatgttatgagccacactatttgcttgcctcctaacaaacgacactaca 43892110  T

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