View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11622_high_32 (Length: 285)
Name: NF11622_high_32
Description: NF11622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11622_high_32 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 12 - 285
Target Start/End: Original strand, 25600056 - 25600329
Alignment:
| Q |
12 |
aggaagtcactgtaatcgttgcaactctcgttgccaatgtagtcgtcgtcgtttgaagggtagggtttgtagccgaagggcatgctttgtttgaactatg |
111 |
Q |
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| T |
25600056 |
aggaagtcaatgtaatcgttgcaactctcgttgccaatgtagtcgtcgtcgtttgaagggtagggtttgtagccgaagggcatgatttgtttgaactatg |
25600155 |
T |
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| Q |
112 |
aagataaatgtgggtaggtttgtataatgagaagcaatgaaggatatatatagagagatagaggtgaaaaaa--gaaaatagagttagggctagtgaaag |
209 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
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| T |
25600156 |
aagataaatgtgggtaggtttgtataatgagaaggaatgaagg--atatatagagagatagaggtgaaaaaaacaaaaaaagagttagggctagtgaaag |
25600253 |
T |
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| Q |
210 |
taaaaagatggggtgtgaaagtgaaatgttttgaatgaagagatcgtagcagggagaggaagtgaagtaagtggct |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
25600254 |
taaaaagatggggtgtgaaagtgaaatgttttgaatgaagagatagtagcagggagaggaagtgaagtaagtggct |
25600329 |
T |
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