View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11624_high_8 (Length: 406)

Name: NF11624_high_8
Description: NF11624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11624_high_8
NF11624_high_8
[»] chr3 (72 HSPs)
chr3 (137-398)||(22405436-22405697)
chr3 (18-103)||(54928803-54928888)
chr3 (138-287)||(10040511-10040659)
chr3 (138-295)||(25294914-25295071)
chr3 (138-290)||(29762156-29762308)
chr3 (137-290)||(54261179-54261332)
chr3 (138-305)||(6462366-6462533)
chr3 (137-304)||(29127872-29128039)
chr3 (138-304)||(29135867-29136033)
chr3 (137-295)||(13893879-13894037)
chr3 (137-290)||(48341973-48342126)
chr3 (137-295)||(51060277-51060435)
chr3 (137-304)||(15320139-15320306)
chr3 (137-290)||(35315909-35316062)
chr3 (137-266)||(49543472-49543601)
chr3 (138-269)||(3755524-3755655)
chr3 (154-300)||(53649697-53649843)
chr3 (166-305)||(54237430-54237569)
chr3 (200-290)||(19146977-19147067)
chr3 (137-290)||(31072831-31072984)
chr3 (137-290)||(45877407-45877560)
chr3 (137-305)||(3136680-3136847)
chr3 (142-290)||(7328802-7328949)
chr3 (138-270)||(30767268-30767400)
chr3 (183-290)||(34662320-34662427)
chr3 (138-257)||(39849026-39849144)
chr3 (138-257)||(42412808-42412927)
chr3 (138-288)||(26207804-26207954)
chr3 (142-304)||(28572198-28572360)
chr3 (138-268)||(47303512-47303642)
chr3 (201-290)||(7650244-7650333)
chr3 (137-270)||(49198304-49198437)
chr3 (137-290)||(51682955-51683108)
chr3 (137-261)||(3763004-3763127)
chr3 (137-269)||(41630534-41630666)
chr3 (206-305)||(3507519-3507618)
chr3 (137-304)||(47749092-47749258)
chr3 (137-267)||(10855337-10855466)
chr3 (156-257)||(15795528-15795628)
chr3 (146-295)||(47219106-47219255)
chr3 (137-230)||(49082777-49082870)
chr3 (154-259)||(52364832-52364937)
chr3 (137-261)||(33251615-33251739)
chr3 (138-305)||(7310689-7310856)
chr3 (206-267)||(30045843-30045904)
chr3 (137-218)||(30735018-30735099)
chr3 (191-255)||(4638161-4638225)
chr3 (138-290)||(47471786-47471937)
chr3 (221-305)||(49021189-49021273)
chr3 (196-295)||(928612-928711)
chr3 (200-267)||(7648756-7648823)
chr3 (137-295)||(26361963-26362119)
chr3 (138-253)||(41219547-41219661)
chr3 (137-267)||(35923647-35923777)
chr3 (239-305)||(36043660-36043726)
chr3 (137-230)||(7612987-7613080)
chr3 (137-230)||(11687170-11687263)
chr3 (206-270)||(8164575-8164639)
chr3 (138-230)||(37092566-37092658)
chr3 (207-305)||(15084931-15085029)
chr3 (183-290)||(22909783-22909889)
chr3 (148-290)||(37319890-37320033)
chr3 (233-295)||(19873421-19873483)
chr3 (137-175)||(32873664-32873702)
chr3 (208-270)||(43330753-43330815)
chr3 (137-175)||(46529986-46530024)
chr3 (208-286)||(50405608-50405686)
chr3 (207-295)||(26043835-26043923)
chr3 (191-290)||(26590267-26590366)
chr3 (208-304)||(34374429-34374525)
chr3 (206-290)||(45450448-45450532)
chr3 (206-286)||(55069684-55069764)
[»] chr8 (44 HSPs)
chr8 (138-305)||(2467103-2467270)
chr8 (138-306)||(15884540-15884707)
chr8 (137-295)||(6100429-6100587)
chr8 (137-290)||(43032858-43033011)
chr8 (138-305)||(24837200-24837367)
chr8 (138-305)||(10927564-10927731)
chr8 (138-290)||(17981399-17981551)
chr8 (137-263)||(13085481-13085607)
chr8 (137-303)||(14846533-14846698)
chr8 (137-290)||(3418513-3418666)
chr8 (137-270)||(8141059-8141192)
chr8 (137-270)||(18373967-18374100)
chr8 (138-290)||(14666071-14666223)
chr8 (165-269)||(22958755-22958859)
chr8 (150-270)||(36914453-36914573)
chr8 (138-251)||(13358980-13359093)
chr8 (138-247)||(38922457-38922566)
chr8 (137-290)||(43027262-43027415)
chr8 (206-290)||(4479296-4479380)
chr8 (137-253)||(44893315-44893431)
chr8 (138-290)||(45521127-45521278)
chr8 (137-295)||(583771-583927)
chr8 (137-304)||(10535390-10535556)
chr8 (137-286)||(68102-68251)
chr8 (138-295)||(2964034-2964191)
chr8 (137-230)||(22810037-22810129)
chr8 (137-266)||(33401823-33401952)
chr8 (138-258)||(1013009-1013129)
chr8 (141-290)||(7673657-7673803)
chr8 (137-231)||(6940515-6940609)
chr8 (137-270)||(9860015-9860149)
chr8 (199-305)||(13357941-13358047)
chr8 (138-295)||(16893895-16894050)
chr8 (138-290)||(8997544-8997696)
chr8 (137-249)||(34613819-34613931)
chr8 (207-290)||(23895595-23895678)
chr8 (137-308)||(26570881-26571052)
chr8 (138-267)||(35496278-35496406)
chr8 (195-251)||(8586978-8587034)
chr8 (137-257)||(18091358-18091477)
chr8 (137-225)||(44031505-44031593)
chr8 (222-304)||(8803096-8803178)
chr8 (137-175)||(34846771-34846809)
chr8 (207-255)||(21174167-21174215)
[»] chr6 (42 HSPs)
chr6 (138-305)||(21898606-21898773)
chr6 (138-290)||(13036004-13036156)
chr6 (138-267)||(2271326-2271453)
chr6 (146-305)||(6606082-6606241)
chr6 (137-295)||(14107353-14107511)
chr6 (138-290)||(5253223-5253375)
chr6 (145-304)||(30788839-30788996)
chr6 (138-295)||(13468891-13469048)
chr6 (138-290)||(3601042-3601194)
chr6 (138-304)||(19089456-19089622)
chr6 (201-304)||(12606451-12606554)
chr6 (137-295)||(8611969-8612127)
chr6 (137-270)||(19230579-19230710)
chr6 (138-295)||(29444760-29444917)
chr6 (143-295)||(8932624-8932776)
chr6 (143-295)||(8944090-8944242)
chr6 (207-295)||(9633620-9633708)
chr6 (138-245)||(10311514-10311621)
chr6 (137-267)||(34954642-34954771)
chr6 (137-270)||(9179756-9179889)
chr6 (137-290)||(8938668-8938821)
chr6 (181-305)||(5029818-5029942)
chr6 (138-254)||(9366459-9366575)
chr6 (138-260)||(24671896-24672018)
chr6 (188-304)||(30410453-30410569)
chr6 (148-295)||(12635782-12635929)
chr6 (137-215)||(3030693-3030771)
chr6 (137-259)||(3587976-3588098)
chr6 (206-256)||(10396499-10396549)
chr6 (141-267)||(33939972-33940098)
chr6 (138-215)||(5759586-5759663)
chr6 (244-305)||(8149782-8149843)
chr6 (137-258)||(9147258-9147379)
chr6 (138-267)||(17114920-17115049)
chr6 (137-305)||(11142560-11142728)
chr6 (206-270)||(32157187-32157251)
chr6 (208-267)||(8888910-8888969)
chr6 (233-295)||(14783415-14783477)
chr6 (138-176)||(15643942-15643980)
chr6 (196-290)||(31129193-31129287)
chr6 (138-175)||(21016866-21016903)
chr6 (206-262)||(13391312-13391368)
[»] chr4 (69 HSPs)
chr4 (139-290)||(40780861-40781012)
chr4 (137-290)||(38165985-38166138)
chr4 (138-290)||(29895746-29895898)
chr4 (137-288)||(1940779-1940927)
chr4 (138-261)||(1446785-1446908)
chr4 (137-304)||(53599018-53599185)
chr4 (143-290)||(42722577-42722724)
chr4 (137-290)||(2559265-2559418)
chr4 (137-270)||(5472868-5473001)
chr4 (137-290)||(52950040-52950193)
chr4 (138-270)||(7741884-7742016)
chr4 (137-285)||(8888980-8889128)
chr4 (138-290)||(47078417-47078569)
chr4 (138-290)||(55920993-55921145)
chr4 (137-270)||(6779169-6779302)
chr4 (137-290)||(38075391-38075544)
chr4 (138-290)||(43458572-43458724)
chr4 (143-305)||(36145200-36145362)
chr4 (201-305)||(4738640-4738744)
chr4 (137-213)||(13552072-13552148)
chr4 (143-295)||(20128273-20128425)
chr4 (138-269)||(27248387-27248516)
chr4 (138-286)||(48317279-48317427)
chr4 (138-257)||(3574479-3574598)
chr4 (138-290)||(6032643-6032792)
chr4 (137-295)||(13073496-13073654)
chr4 (138-295)||(33647680-33647837)
chr4 (149-295)||(38168227-38168372)
chr4 (149-295)||(49260660-49260806)
chr4 (138-290)||(24166409-24166561)
chr4 (138-267)||(41162905-41163034)
chr4 (137-289)||(295534-295685)
chr4 (206-290)||(7246646-7246730)
chr4 (144-290)||(49952145-49952292)
chr4 (137-290)||(14123974-14124127)
chr4 (138-255)||(29588695-29588812)
chr4 (142-270)||(36262787-36262913)
chr4 (137-290)||(7000482-7000630)
chr4 (138-270)||(20532429-20532561)
chr4 (157-289)||(21429279-21429411)
chr4 (191-290)||(16450312-16450411)
chr4 (200-290)||(14859312-14859402)
chr4 (201-295)||(18531541-18531635)
chr4 (196-290)||(47682382-47682475)
chr4 (141-290)||(15839935-15840083)
chr4 (137-255)||(33109280-33109400)
chr4 (138-266)||(12703569-12703697)
chr4 (137-261)||(20354595-20354719)
chr4 (146-270)||(30317200-30317324)
chr4 (137-257)||(41339428-41339548)
chr4 (191-290)||(43468359-43468458)
chr4 (137-290)||(15829657-15829810)
chr4 (137-263)||(26479976-26480102)
chr4 (208-266)||(55703776-55703834)
chr4 (201-286)||(3159473-3159558)
chr4 (206-270)||(3507297-3507361)
chr4 (196-256)||(14077963-14078023)
chr4 (137-257)||(55005339-55005459)
chr4 (206-257)||(17080070-17080121)
chr4 (137-176)||(19651559-19651598)
chr4 (137-257)||(31588642-31588764)
chr4 (206-261)||(42722408-42722463)
chr4 (137-255)||(48656176-48656295)
chr4 (137-290)||(15732448-15732601)
chr4 (137-175)||(34667717-34667755)
chr4 (138-175)||(14567210-14567247)
chr4 (138-175)||(27531772-27531809)
chr4 (137-230)||(40272391-40272484)
chr4 (206-255)||(48015108-48015157)
[»] chr7 (53 HSPs)
chr7 (138-267)||(1797417-1797546)
chr7 (138-290)||(48804640-48804792)
chr7 (138-290)||(4195202-4195354)
chr7 (138-305)||(22993352-22993519)
chr7 (137-295)||(17748377-17748535)
chr7 (137-290)||(34659182-34659335)
chr7 (138-305)||(13095815-13095982)
chr7 (143-305)||(10047861-10048023)
chr7 (137-270)||(5039438-5039571)
chr7 (137-270)||(23658136-23658268)
chr7 (138-290)||(47341833-47341985)
chr7 (137-295)||(5069810-5069968)
chr7 (165-290)||(38578867-38578992)
chr7 (137-290)||(43346779-43346932)
chr7 (138-255)||(43925469-43925586)
chr7 (139-257)||(16802081-16802199)
chr7 (137-295)||(22973923-22974081)
chr7 (137-213)||(9685695-9685771)
chr7 (139-289)||(18785627-18785777)
chr7 (137-290)||(26423288-26423440)
chr7 (141-305)||(21530708-21530872)
chr7 (206-266)||(39474965-39475025)
chr7 (206-290)||(41945498-41945582)
chr7 (137-295)||(43861967-43862125)
chr7 (137-248)||(46414631-46414742)
chr7 (137-295)||(14650273-14650431)
chr7 (137-295)||(1605897-1606055)
chr7 (166-284)||(28396166-28396284)
chr7 (206-304)||(28744187-28744285)
chr7 (138-255)||(365097-365214)
chr7 (137-270)||(4973130-4973263)
chr7 (137-290)||(8734686-8734839)
chr7 (137-270)||(36619274-36619407)
chr7 (206-258)||(37514946-37514998)
chr7 (206-306)||(39420862-39420962)
chr7 (137-257)||(45960036-45960155)
chr7 (156-290)||(21190780-21190914)
chr7 (137-267)||(42032052-42032182)
chr7 (146-267)||(3353390-3353510)
chr7 (138-175)||(19914817-19914854)
chr7 (137-230)||(22268089-22268182)
chr7 (137-290)||(27028235-27028388)
chr7 (137-290)||(27875088-27875240)
chr7 (137-290)||(29805440-29805592)
chr7 (137-176)||(4228865-4228904)
chr7 (138-189)||(11607088-11607139)
chr7 (207-304)||(48551883-48551980)
chr7 (138-215)||(34127695-34127772)
chr7 (218-290)||(3603394-3603466)
chr7 (138-290)||(22573770-22573921)
chr7 (222-305)||(24983403-24983487)
chr7 (207-259)||(30827318-30827370)
chr7 (138-230)||(45447927-45448019)
[»] chr2 (66 HSPs)
chr2 (138-290)||(2550822-2550974)
chr2 (138-270)||(42770671-42770803)
chr2 (138-305)||(7747228-7747395)
chr2 (138-295)||(8410085-8410242)
chr2 (144-305)||(41220595-41220756)
chr2 (138-290)||(18902530-18902682)
chr2 (138-295)||(20612529-20612688)
chr2 (143-290)||(25540404-25540551)
chr2 (137-290)||(14169609-14169762)
chr2 (138-270)||(10026636-10026768)
chr2 (153-305)||(10823029-10823181)
chr2 (137-286)||(21286397-21286546)
chr2 (142-295)||(22593093-22593244)
chr2 (137-305)||(38005355-38005523)
chr2 (137-270)||(38962716-38962849)
chr2 (137-267)||(37560126-37560256)
chr2 (137-290)||(12864177-12864330)
chr2 (137-305)||(2528326-2528494)
chr2 (138-290)||(3643887-3644039)
chr2 (137-305)||(24179524-24179689)
chr2 (138-281)||(331455-331598)
chr2 (138-285)||(39201513-39201660)
chr2 (137-267)||(34722634-34722763)
chr2 (138-303)||(44945548-44945712)
chr2 (143-256)||(13026445-13026558)
chr2 (137-258)||(34356159-34356280)
chr2 (138-290)||(41031906-41032057)
chr2 (137-267)||(19976830-19976960)
chr2 (137-290)||(28616379-28616533)
chr2 (141-290)||(16813165-16813313)
chr2 (141-290)||(16852444-16852592)
chr2 (137-270)||(45263687-45263820)
chr2 (149-305)||(3811676-3811832)
chr2 (138-270)||(7787010-7787142)
chr2 (138-290)||(35946693-35946844)
chr2 (138-290)||(44139438-44139590)
chr2 (136-267)||(25549680-25549811)
chr2 (183-290)||(27725939-27726046)
chr2 (207-305)||(10669615-10669713)
chr2 (144-290)||(31596432-31596578)
chr2 (139-257)||(41187804-41187922)
chr2 (137-270)||(6358171-6358304)
chr2 (141-290)||(11069835-11069984)
chr2 (137-270)||(39806905-39807038)
chr2 (138-270)||(10046497-10046628)
chr2 (137-257)||(21180347-21180467)
chr2 (137-267)||(29422168-29422298)
chr2 (208-305)||(12455334-12455431)
chr2 (137-290)||(18649026-18649179)
chr2 (202-295)||(20116607-20116700)
chr2 (138-266)||(10106542-10106670)
chr2 (146-290)||(16034899-16035043)
chr2 (137-217)||(23500755-23500834)
chr2 (151-290)||(2784900-2785038)
chr2 (191-290)||(16325602-16325701)
chr2 (208-290)||(9360748-9360830)
chr2 (208-295)||(29653651-29653733)
chr2 (137-266)||(5035241-5035370)
chr2 (137-295)||(14853361-14853520)
chr2 (138-230)||(33005706-33005797)
chr2 (138-230)||(37804951-37805043)
chr2 (250-290)||(44023361-44023401)
chr2 (137-204)||(32028366-32028433)
chr2 (208-266)||(28525479-28525537)
chr2 (191-267)||(3848937-3849013)
chr2 (183-263)||(43303319-43303399)
[»] chr1 (62 HSPs)
chr1 (137-305)||(41663842-41664010)
chr1 (140-290)||(26325769-26325919)
chr1 (137-290)||(5855476-5855629)
chr1 (138-295)||(8763946-8764103)
chr1 (138-295)||(43959817-43959974)
chr1 (135-290)||(45361883-45362038)
chr1 (137-295)||(17642000-17642158)
chr1 (137-290)||(10422742-10422895)
chr1 (137-305)||(18915821-18915989)
chr1 (138-305)||(49078069-49078236)
chr1 (137-269)||(33418137-33418269)
chr1 (137-259)||(32825-32947)
chr1 (137-290)||(50371835-50371988)
chr1 (139-267)||(10336472-10336600)
chr1 (147-269)||(17092499-17092621)
chr1 (136-286)||(30927732-30927882)
chr1 (141-290)||(9659180-9659328)
chr1 (137-290)||(10172972-10173125)
chr1 (138-267)||(33498863-33498992)
chr1 (138-290)||(2980932-2981084)
chr1 (143-267)||(14254292-14254416)
chr1 (209-305)||(37339846-37339942)
chr1 (140-256)||(48798105-48798221)
chr1 (137-290)||(2567230-2567383)
chr1 (137-290)||(5503985-5504138)
chr1 (137-286)||(31576552-31576701)
chr1 (138-290)||(11397890-11398041)
chr1 (137-257)||(32150956-32151076)
chr1 (147-290)||(50503362-50503505)
chr1 (138-256)||(33004050-33004168)
chr1 (148-269)||(5063866-5063986)
chr1 (149-290)||(16956432-16956573)
chr1 (141-258)||(25178609-25178725)
chr1 (138-270)||(40288498-40288630)
chr1 (138-270)||(45726454-45726586)
chr1 (215-290)||(4581683-4581758)
chr1 (147-290)||(18649353-18649496)
chr1 (138-255)||(6563396-6563513)
chr1 (191-295)||(44969673-44969776)
chr1 (201-261)||(10507716-10507776)
chr1 (138-290)||(15238107-15238259)
chr1 (147-230)||(34334356-34334439)
chr1 (148-295)||(34697300-34697447)
chr1 (137-252)||(34877944-34878059)
chr1 (201-290)||(16263563-16263652)
chr1 (204-269)||(48761197-48761262)
chr1 (137-230)||(51437423-51437516)
chr1 (138-270)||(9853298-9853430)
chr1 (138-290)||(26660093-26660244)
chr1 (208-263)||(17988688-17988743)
chr1 (206-257)||(21849239-21849290)
chr1 (207-261)||(13262107-13262161)
chr1 (138-176)||(41743228-41743266)
chr1 (137-230)||(8905212-8905304)
chr1 (153-286)||(26258666-26258798)
chr1 (183-256)||(28324615-28324688)
chr1 (137-290)||(32142847-32142999)
chr1 (216-261)||(35908791-35908836)
chr1 (137-213)||(892375-892451)
chr1 (137-257)||(12744557-12744677)
chr1 (137-257)||(12755547-12755667)
chr1 (138-262)||(17389727-17389850)
[»] scaffold0029 (1 HSPs)
scaffold0029 (137-295)||(41000-41158)
[»] chr5 (65 HSPs)
chr5 (138-295)||(42086282-42086439)
chr5 (138-305)||(5731905-5732072)
chr5 (137-295)||(1538385-1538543)
chr5 (138-295)||(19572679-19572836)
chr5 (134-256)||(25417217-25417339)
chr5 (138-290)||(20525793-20525945)
chr5 (138-290)||(37263196-37263347)
chr5 (138-290)||(7866536-7866688)
chr5 (146-290)||(14588617-14588761)
chr5 (137-244)||(35403558-35403665)
chr5 (137-295)||(9812826-9812984)
chr5 (137-295)||(41163455-41163612)
chr5 (138-290)||(8513474-8513626)
chr5 (139-306)||(4016239-4016406)
chr5 (137-304)||(30349533-30349700)
chr5 (137-295)||(12704968-12705126)
chr5 (137-295)||(12766085-12766243)
chr5 (138-290)||(20682617-20682770)
chr5 (137-305)||(42861203-42861371)
chr5 (137-257)||(7308397-7308517)
chr5 (142-266)||(9168277-9168399)
chr5 (191-295)||(9805012-9805116)
chr5 (137-267)||(23247374-23247504)
chr5 (137-295)||(18136271-18136433)
chr5 (137-290)||(23383602-23383764)
chr5 (183-267)||(41800977-41801061)
chr5 (147-290)||(11845801-11845944)
chr5 (191-270)||(12081916-12081995)
chr5 (148-295)||(13664225-13664372)
chr5 (138-249)||(28857083-28857194)
chr5 (147-270)||(30995085-30995208)
chr5 (147-305)||(38897704-38897861)
chr5 (142-244)||(28862784-28862886)
chr5 (137-230)||(1898955-1899048)
chr5 (137-270)||(5079285-5079418)
chr5 (152-261)||(35638062-35638171)
chr5 (137-295)||(24498937-24499094)
chr5 (207-290)||(42291505-42291588)
chr5 (191-257)||(18262651-18262717)
chr5 (200-290)||(43399145-43399235)
chr5 (149-270)||(14974344-14974465)
chr5 (170-290)||(40117402-40117522)
chr5 (167-290)||(7336604-7336726)
chr5 (206-270)||(18294504-18294568)
chr5 (201-305)||(39099764-39099868)
chr5 (207-270)||(3653934-3653997)
chr5 (199-290)||(20255385-20255476)
chr5 (153-266)||(21487587-21487697)
chr5 (207-266)||(24463910-24463969)
chr5 (183-237)||(7736871-7736925)
chr5 (137-290)||(14728036-14728190)
chr5 (138-175)||(6767166-6767203)
chr5 (135-176)||(18327722-18327763)
chr5 (138-267)||(24875300-24875429)
chr5 (137-230)||(38297024-38297117)
chr5 (141-261)||(14152008-14152128)
chr5 (138-230)||(16755016-16755108)
chr5 (166-270)||(24653832-24653935)
chr5 (138-173)||(28856932-28856967)
chr5 (137-262)||(1826811-1826937)
chr5 (206-256)||(35006769-35006819)
chr5 (241-295)||(40773331-40773385)
chr5 (243-304)||(36783303-36783364)
chr5 (243-290)||(27648425-27648472)
chr5 (138-194)||(35561914-35561970)
[»] scaffold0002 (3 HSPs)
scaffold0002 (141-304)||(319382-319545)
scaffold0002 (138-290)||(527-679)
scaffold0002 (138-225)||(412091-412178)
[»] scaffold0006 (1 HSPs)
scaffold0006 (137-288)||(68473-68621)
[»] scaffold0005 (2 HSPs)
scaffold0005 (138-257)||(271107-271226)
scaffold0005 (138-175)||(250128-250165)
[»] scaffold0011 (2 HSPs)
scaffold0011 (142-290)||(224278-224426)
scaffold0011 (216-290)||(186552-186626)
[»] scaffold0170 (1 HSPs)
scaffold0170 (143-270)||(9807-9934)
[»] scaffold0223 (1 HSPs)
scaffold0223 (153-290)||(16851-16988)
[»] scaffold0016 (1 HSPs)
scaffold0016 (137-290)||(8701-8863)
[»] scaffold0376 (1 HSPs)
scaffold0376 (138-290)||(12627-12779)
[»] scaffold0209 (1 HSPs)
scaffold0209 (137-295)||(12531-12687)
[»] scaffold0010 (1 HSPs)
scaffold0010 (196-295)||(155706-155805)
[»] scaffold0009 (1 HSPs)
scaffold0009 (138-290)||(42832-42984)
[»] scaffold0291 (1 HSPs)
scaffold0291 (191-290)||(6865-6964)
[»] scaffold0341 (1 HSPs)
scaffold0341 (138-255)||(18589-18706)
[»] scaffold0635 (1 HSPs)
scaffold0635 (138-266)||(2114-2242)
[»] scaffold0086 (1 HSPs)
scaffold0086 (201-261)||(26203-26263)
[»] scaffold0001 (1 HSPs)
scaffold0001 (206-257)||(65185-65236)
[»] scaffold0155 (1 HSPs)
scaffold0155 (206-290)||(19280-19364)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 137 - 398
Target Start/End: Complemental strand, 22405697 - 22405436
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||   || |||| ||  || |    
T  22405697 tttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgccttt 22405598  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaacgaaggaattcatgctagcttttaatgtctt 336  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22405597 atgcacgagccggattaatcgtccatctttggtgcgtcggaaaccagtgcaaaacccaagaataaaaaacgaaggaattcatgctagcttttaatgtctt 22405498  T
Q  337 catgttttgatcatccaacaaatagtaactgtttgattatccttttactttgtatctctgct 398  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22405497 catgttttcatcatccaacaaatagtaactgtttgattatccttttactttgtatctttgct 22405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 54928888 - 54928803
Alignment:
Q  18 aaactaaggaagagaaagagcaatgctatatggtgttatagatttctcacacgaacatgaacgaatgcatgaaaacatatatttaa 103  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54928888 aaactaaaaaagagaaagagcaatgctatatggtgttatagatttctcacacgaacatgaacgaatgcatgaaaacatatatttaa 54928803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 138 - 287
Target Start/End: Original strand, 10040511 - 10040659
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| | |||||||||  || | ||||||| |||| ||||||||| |||||||||||||| ||||||||||  |||||    
T  10040511 ttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcatgcctcta 10040609  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcg 287  Q
     |||||||||||| | |||||||| |||||||| | ||||||||||||||    
T  10040610 cgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 25294914 - 25295071
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||||| || | |||||| ||||| ||||||||||  |||||    
T  25294914 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctcta 25295013  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||| ||||||||||||||||||| | |||||| | ||||||||||||||||| ||||    
T  25295014 tgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaagccaa 25295071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 29762308 - 29762156
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||| |||| || | ||||||| || | ||||||||| | |||||| ||||| ||||||||||  |||||    
T  29762308 ttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctcta 29762209  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||||||||||||| | |||||| |  ||||||||||||||||    
T  29762208 tgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 29762156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 54261179 - 54261332
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||   | | |||| || |||| ||||  |||||||||||||||||| ||||||||||  ||||    
T  54261179 tttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctct 54261278  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  54261279 acgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 54261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 6462366 - 6462533
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||||| ||||||||||||  | | |||| || |||| |||| ||||  ||||||||||||| ||||||||||  |||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctcta 6462465  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| ||||||||||||||| ||||  || ||| | ||||||||||||||||| |||| || ||||||    
T  6462466 cgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaaaaccaaaaaaaaaaaa 6462533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 29127872 - 29128039
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||| |||| ||||||||||||  | | ||||||| |||| |||  ||||  ||||||| ||||||||||||||||  ||||    
T  29127872 tttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctct 29127971  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | ||| ||||||||||||||| ||| |||||||| |  |||||||| ||||||| |||| || |||||    
T  29127972 acgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaa 29128039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 304
Target Start/End: Original strand, 29135867 - 29136033
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||||| || |||||||||||| || | |||| ||  ||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  29135867 ttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctcta 29135966  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
     ||| |||||||||||||| |||| | |||||| | ||||||||||| ||||| |||| || |||||    
T  29135967 cgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaagccaaaaaaaaaaa 29136033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 13893879 - 13894037
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||| | || | |||| || |||  |||  |||| ||||||||||||||||| |||||||  ||||    
T  13893879 tttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctct 13893978  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 295  Q
    |  |||||||||||||||||| ||| |||||||| ||| | |||||||||||||| ||||    
T  13893979 acacacgagccggattagtcgcccacctttggtg-gatcgaaaaccggtgcgaaagccaa 13894037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 48341973 - 48342126
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||   | | |||| || |||||||||  ||| ||||||||||||||  |||||||||  ||||    
T  48341973 tttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctct 48342072  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    | ||| || || |||||||||||||||||||||| ||| |||||| |||||||||    
T  48342073 acgcatgaaccagattagtcgtccatctttggtg-gatcggaaacaggtgcgaaa 48342126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 51060435 - 51060277
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||  ||||||| |||||||  ||| || | ||||||| |||| ||||||||| |||||||| ||||||||||||||||  ||||    
T  51060435 tttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctct 51060336  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || | |||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  51060335 acgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaa 51060277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 15320139 - 15320306
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| |||   ||||||||||| | |||| ||||| ||||  ||||    
T  15320139 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctct 15320238  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | ||||||||||||||||||| ||| |||||||| |   ||||||||||||||| |||| || |||||    
T  15320239 acgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaaaaaaaaa 15320306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 35315909 - 35316062
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||||| |||||||||||  ||   ||||||| |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  35315909 tttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 35316008  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||| |||||||||| |||  ||||||| |  |||||||| |||||||    
T  35316009 acgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaa 35316062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 49543472 - 49543601
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||  ||||||||||||||||| |||||||||||| |  | ||||||| |||| ||||||| | ||||||||| |||||||||| ||||  ||||    
T  49543472 tttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctct 49543571  T
Q  237 atgcacgagccggattagtcgtccatcttt 266  Q
    | |||||||||| |||||||| ||| ||||    
T  49543572 acgcacgagccgaattagtcgcccaccttt 49543601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 3755524 - 3755655
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| |||||||||||| |||||| |  ||||||||||| || | |||| ||| ||| |||| |||||||||||||| |||  |||||||||| ||||||    
T  3755524 ttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctcta 3755623  T
Q  238 tgcacgagccggattagtcgtccatctttggt 269  Q
     ||| ||||||||||||||||| | |||||||    
T  3755624 cgcatgagccggattagtcgtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 53649697 - 53649843
Alignment:
Q  154 aggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatta 253  Q
    |||||||||| |||||||||||| || | |||| || |||| |||||||||  ||||||| ||||| |||||||| | |||||| ||| |||||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggatta 53649796  T
Q  254 gtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaata 300  Q
    ||||| || ||||| || ||| |||||||||||||||| |||| ||||    
T  53649797 gtcgttcacctttgatg-gatcggaaaccggtgcgaaaaccaaaaata 53649843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 305
Target Start/End: Original strand, 54237430 - 54237569
Alignment:
Q  166 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 265  Q
    ||||||||||| || ||||||||| | || ||| |||||  ||||||| |||||||||||||||| |||||| ||| ||||||||| ||||||||| | |    
T  54237430 caaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccat 54237529  T
Q  266 tggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | ||| |  |||||||||||||||| |||| || ||||||    
T  54237530 tagtgggtcggaaaccggtgcgaaagccaaaaagaaaaaa 54237569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 19146977 - 19147067
Alignment:
Q  200 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||||||||| ||||| | ||  |||||||||||||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  19146977 tcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 19147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 31072831 - 31072984
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| |||||||||||||||  ||||||||||  ||   |||| |  |||| |||  |||| ||||||||||||||||||||| |||  ||||    
T  31072831 tttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctct 31072930  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | |||||| || ||||| ||||||| |||||||  | |||||||||||||||||    
T  31072931 acgcacgacccagattaatcgtccacctttggtaggttggaaaccggtgcgaaa 31072984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 45877407 - 45877560
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||| ||| |||||||||||| || | |||| || |||| |||  |||| | |||||| ||||| |||||| |||  ||||    
T  45877407 tttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctct 45877506  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||||||||||||| || | ||| || |  ||||||||||||||||    
T  45877507 acgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaa 45877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 305
Target Start/End: Complemental strand, 3136847 - 3136680
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||| |||||||| |||||||  ||||||||||  || | |||| ||  ||| ||| ||||| |||||||| ||||| ||||||||||  ||||    
T  3136847 tttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcagg-ggaacaacacttgggcagtgcgcatgcctct 3136749  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | ||| ||| ||||||||||||||| |||||||  |  |||||||||||||||| |||| || ||||||    
T  3136748 acgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 3136680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 142 - 290
Target Start/End: Original strand, 7328802 - 7328949
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||| |||||||||||| |||| |||||||||||  || |||||| || |||| |||| |||| |||||||| ||||| ||||||||||  || || |||    
T  7328802 gctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgca 7328900  T
Q  242 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||||||||| ||| |||||||| |  | ||||||||||||||    
T  7328901 tgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 7328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 30767400 - 30767268
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||| |||| ||||||| |||   | | ||||||| |||| |||  |||| |||||||| ||||| ||||| ||||  |||||    
T  30767400 ttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctcta 30767301  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||||||||||||||||||| ||| ||||||||    
T  30767300 cgcacgagccggattagtcgcccacctttggtg 30767268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 290
Target Start/End: Complemental strand, 34662427 - 34662320
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 282  Q
    ||||||| |||| ||| |||||||||| |||| ||||||||| ||||| |||||||||| |||||| |||||||||||| |||| |||   |||||||||    
T  34662427 aatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaaaccg 34662328  T
Q  283 gtgcgaaa 290  Q
     |||||||    
T  34662327 atgcgaaa 34662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 39849026 - 39849144
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  |  | ||| ||| |||| |||| || |||||||||||||||| ||||| ||||  |||||    
T  39849026 ttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattccca-gaggaacaacgcttggccagtgtgcatgcctcta 39849124  T
Q  238 tgcacgagccggattagtcg 257  Q
     ||| |||||||||||||||    
T  39849125 cgcatgagccggattagtcg 39849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 42412927 - 42412808
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||| ||||||||||||||| |||||||||||| || | |||| || |||| |||| | || ||||||||||||||  ||||| |||  |||||    
T  42412927 ttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctcta 42412828  T
Q  238 tgcacgagccggattagtcg 257  Q
     ||| |||||||||||||||    
T  42412827 cgcatgagccggattagtcg 42412808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 288
Target Start/End: Complemental strand, 26207954 - 26207804
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||| |||  || | |||| || |||| |||| || | |||||||||||||  ||||| ||||  |||||    
T  26207954 ttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctcta 26207855  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 288  Q
     ||| ||||||||||||||| ||||  || ||| |  ||||||||||||||    
T  26207854 cgcatgagccggattagtcggccattattagtgggtcggaaaccggtgcga 26207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 304
Target Start/End: Complemental strand, 28572360 - 28572198
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    ||||||||||||||||||||||  |||| ||| |  || | ||||  | |||| |||| |||| | |||||||||||| ||||  ||||  ||||| |||    
T  28572360 gctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgca 28572261  T
Q  242 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    |||||||||||||||| ||| |||||||| |  |||||||||||||||| |||| || |||||    
T  28572260 cgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaa 28572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 268
Target Start/End: Complemental strand, 47303642 - 47303512
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||| ||||||||  | |||||||||||| ||  |||||||| |||  |||| ||||||||||||| |||||||||||| |||  |||||    
T  47303642 ttgggctccggtggtaaggagctttttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctcta 47303543  T
Q  238 tgcacgagccggattagtcgtccatctttgg 268  Q
      || ||||||||||||||||| | ||||||    
T  47303542 cacatgagccggattagtcgtcaacctttgg 47303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 7650244 - 7650333
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||||||| ||||| |||| || || |||||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  7650244 cagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 49198304 - 49198437
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| ||||||| | || |||||||| ||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  49198304 tttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctct 49198403  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| ||||||||||||||||||| | ||||||    
T  49198404 acgcatgagccggattagtcgtccaccattggtg 49198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 51683108 - 51682955
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||| |||||||||| |||| ||||||| || | |||| |  |||| |||| |||| |||||||||||||  ||||||||||  ||||    
T  51683108 tttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctct 51683009  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
       |||||||||||||||||| ||| |  ||||| |  ||||||| ||||||||    
T  51683008 ccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 3763004 - 3763127
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||| |||| |||| ||| ||||||||  ||||||||||| || |||||| ||  ||| |||| ||| ||||||||||||||||||||| |||| |||||    
T  3763004 tttgagctctagtgacaaagagctcctttcaaggacgtatccgggaaataccggattcgattcacag-aggaacaacgcttggtcagtgtgcatgtctct 3763102  T
Q  237 atgcacgagccggattagtcgtcca 261  Q
    | |||||| | ||||||||||||||    
T  3763103 acgcacgaactggattagtcgtcca 3763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 41630666 - 41630534
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| |||||||||||| ||| |||||||  ||  ||||| || |||| |||| || | |||||||||||||  ||||||||||  ||||    
T  41630666 tttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctct 41630567  T
Q  237 atgcacgagccggattagtcgtccatctttggt 269  Q
    |  || ||||||||||||||| ||| |||||||    
T  41630566 acacatgagccggattagtcgcccacctttggt 41630534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 3507618 - 3507519
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||| ||||| ||||||||||  ||||| |||||||||||||||||||  || |||||||| |  |||||||||||||||| |||| || ||||||    
T  3507618 ggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaaaccaacaaaaaaaaa 3507519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 304
Target Start/End: Complemental strand, 47749258 - 47749092
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||| || ||||| || |||||||||||| |  | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  47749258 tttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctagg-ggaacaactcttggccagtgcgcatgcctct 47749160  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | |||||||||| |||||||| ||| |||||||  |  |||||||| ||||||| |||| || |||||    
T  47749159 acgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaagccaaaaaaaaaaa 47749092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 10855337 - 10855466
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| ||||||| |||   | |||||| || |||  |||  |||| |||||||||||||| |||| |||||  ||||    
T  10855337 tttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctct 10855436  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | |||||| ||| |||||||| |||||||||    
T  10855437 acgcacgaaccgaattagtcg-ccatctttg 10855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 15795628 - 15795528
Alignment:
Q  156 gagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 255  Q
    |||||||| |||||||||||  || | |||| ||||||| |||| |||| |||||||||||||||||||||||||  ||||| |||||||| | ||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgattcccagg-ggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagt 15795530  T
Q  256 cg 257  Q
    ||    
T  15795529 cg 15795528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 295
Target Start/End: Original strand, 47219106 - 47219255
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    |||||| || |||||| | |||||||||||| || | |||| |  |||| |||| || | | ||||||||||||  |||||||||  ||||| ||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  246 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||||||||| ||||| || |  |||||||||||||||| ||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagccaa 47219255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 49082777 - 49082870
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||||| ||||||||| | |||||||||| || | |||| ||||||| |||| ||||  ||||||||||| | ||||||||||    
T  49082777 tttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcat 49082870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 52364937 - 52364832
Alignment:
Q  154 aggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatta 253  Q
    |||||||||| |||||||||||  || | |||| ||||||| |||| ||| ||||||||||||||  ||||||||||  ||||| |||||||| ||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T
Q  254 gtcgtc 259  Q
     |||||    
T  52364837 atcgtc 52364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 33251615 - 33251739
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||| ||||||| |||||||| ||||||||||||  | | |||| || |||| |||| | |  ||||||||| |||| ||||| ||||  ||||    
T  33251615 tttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctct 33251714  T
Q  237 atgcacgagccggattagtcgtcca 261  Q
    | ||| |||||||||||||||||||    
T  33251715 acgcatgagccggattagtcgtcca 33251739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 7310856 - 7310689
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| ||||||| |||||||| ||||| |||||   | | |||| || |||| |||| |||  |||||||| ||||  | ||| ||||  |||||    
T  7310856 ttgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctcta 7310757  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     |||||||||||||||||||  ||||||||||| |  |||||||| ||||||| |||| || ||||||    
T  7310756 cgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaaa 7310689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 30045843 - 30045904
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 267  Q
    |||||||||||||| |||||||||| |||||| ||||||| | ||||||||||||| |||||    
T  30045843 ggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttg 30045904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 30735099 - 30735018
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttg 218  Q
    ||||||||| ||||||||||||||| | ||||||||| |  || | |||| ||||||| ||||||||| |||||||||||||    
T  30735099 tttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttg 30735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 4638161 - 4638225
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 255  Q
    |||| |||| |||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  4638161 gttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 47471786 - 47471937
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| |||||||| |||||||| |||||||||||     | |||| || |||| |||| |||| ||||||| ||||||  |||||||||   ||||    
T  47471786 ttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattcccagg-ggaacaatgcttggctagtgcgcatgcttcta 47471884  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| |||||| |||||||||||| |||||||| |  |||||||| |||||||    
T  47471885 cgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaa 47471937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 49021273 - 49021189
Alignment:
Q  221 cagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||||  ||||| ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 49021189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 928612 - 928711
Alignment:
Q  196 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||||| |||||||| ||||  ||||||||||  | ||| |||||||||||||||||| |||| |||||||| |  | ||| |||||||||| ||||    
T  928612 attctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaagccaa 928711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 7648756 - 7648823
Alignment:
Q  200 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 267  Q
    ||||| ||||||||| |||  ||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  7648756 tcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 26362119 - 26361963
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| |||||||| ||| |||||||| ||||||||||   || | ||||||  |||  |||| || | ||||||||| |||||||||| ||||  ||||    
T  26362119 tttggactccagtgacaatgagctccttccaaggacgtt--cgaggaatatcaggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctct 26362022  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | |||||||||||||||||||  || ||||| || |  ||||||||||| |||| ||||    
T  26362021 acgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaagccaa 26361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 41219547 - 41219661
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| || |||| |||||||| | |||||||||| || ||| || | ||||| ||||||||||||||||||| |||| ||||||| ||  ||||     
T  41219547 ttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctg 41219645  T
Q  238 tgcacgagccggatta 253  Q
     |||||||| ||||||    
T  41219646 cgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 35923777 - 35923647
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||| |||||| | |||||||||||   |   |||| |  |||| ||||  ||| ||||||||| |||| ||||||||||  ||||    
T  35923777 tttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctct 35923678  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||||||| || ||||||||||||||||||    
T  35923677 aagcacgagtcgaattagtcgtccatctttg 35923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 36043726 - 36043660
Alignment:
Q  239 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||||||||||||| ||| |||||||| |  |||||||||||||||| |||| || ||||||    
T  36043726 gcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 36043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 7613080 - 7612987
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||| || |||||||||||||||||| |||||||||||   | | |||| || |||| |||| |||| ||||||||||||||  |||||||||    
T  7613080 tttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 11687263 - 11687170
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||||||| ||||||| |||||||||||   |   |||| || |||  ||||||||| ||||||| |||||| ||||||||||    
T  11687263 tttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcat 11687170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 8164575 - 8164639
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    |||||||||||||| ||||||||||  || || ||||||| ||||||||||| ||| ||||||||    
T  8164575 ggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtg 8164639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 37092658 - 37092566
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||||||||||| || |||||||||||  |||| |||||||  ||  |||  || | ||||||||| |||| ||||||||||    
T  37092658 ttgggctccagtggcaaggagcttcttccaaggacgtacccgtggaatatcggattagatttccaaggggaacaacgtttggccagtgcgcat 37092566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 15085029 - 15084931
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||| |||| ||||| ||||| ||||| | ||||||  ||||||||||| |||||||||| ||| ||||||||||| |||| |||| || ||||||    
T  15085029 gaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtg-gatcggaaaccggtgtgaaagccaaaaaaaaaaaa 15084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 22909783 - 22909889
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 282  Q
    ||||||| |||| |||||||| |||||||||||| ||  ||||||||||  |||| ||| |||||| ||||||||| || ||||| || |  |||||||     
T  22909783 aatatcgggttcgattctcag-aggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaacca 22909881  T
Q  283 gtgcgaaa 290  Q
    ||||||||    
T  22909882 gtgcgaaa 22909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 37320033 - 37319890
Alignment:
Q  148 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagga-ggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||||||||| || | |||||||||||  || |||||||||| ||  |||||||||| | |||||||||||   |||| ||||  ||||| ||||||||    
T  37320033 gtggcaaggagttcattccaaggacgtacacgagaaatatcgaatttgattctcaggatgaaacaacgcttgacaagtgtgcatgcctctacgcacgagc 37319934  T
Q  247 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     | |||| ||||||| | ||| || | ||||||| |||||||||    
T  37319933 tgaattaatcgtccaccgttgatgggttggaaactggtgcgaaa 37319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 19873421 - 19873483
Alignment:
Q  233 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||| |||||||||||||||||||||||||||| ||| |  |||||| ||||| ||| ||||    
T  19873421 ctctacgcacgagccggattagtcgtccatcttttgtgggtcggaaactggtgcaaaagccaa 19873483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 32873702 - 32873664
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  32873702 tttgggctccagtggcaaggagctcattccaaggacgta 32873664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 43330815 - 43330753
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    |||||| ||||  ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 43330753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 46530024 - 46529986
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  46530024 tttgggctccagtggcaaggagctcctttcaaggacgta 46529986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 50405686 - 50405608
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    |||||||||||  ||||||||||  ||||| ||||||| ||||||||||| ||| | |||||| |  ||||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 26043835 - 26043923
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||| ||||| ||||||||||  ||||| ||| |||||||||||||||  || |||||||| |   |||||||| |||||| ||||    
T  26043835 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaaagccaa 26043923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 26590366 - 26590267
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 289  Q
    |||| ||||||||| |||||||||||||||||||| ||||  |||||  |||||||  ||||| |||  | | ||||||| ||| |||||||||||||||    
T  26590366 gttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctacacacgagctagattaatcgatcgtatttggtg-gatcggaaaccggtgcgaa 26590268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 34374525 - 34374429
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    |||||| ||||||||||||||||  ||| | |||  || ||||||||||| || ||||||||| |  ||||||||||| |||| |||| || |||||    
T  34374525 aacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtgtgaaagccaaaaaaaaaaa 34374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 45450532 - 45450448
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||| |||||  ||||||||||  ||||| |||  |||  ||||||||||||| ||||| || | |||||||||||||||||    
T  45450532 ggaacaatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttgatgagttggaaaccggtgcgaaa 45450448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 286
Target Start/End: Complemental strand, 55069764 - 55069684
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    ||||||||| |||| |||||| |||  ||||| ||||||||||||||| |||  || |||||||| |  ||||||||||||    
T  55069764 ggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 2467270 - 2467103
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||  |||| |||||||| ||||| |||||||||| ||||||    
T  2467270 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctcta 2467171  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||| |||||||||||||||||||   ||||||||  |||||||||||||||| |||| || ||||||    
T  2467170 tgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaagccaaaaaaaaaaaa 2467103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 306
Target Start/End: Complemental strand, 15884707 - 15884540
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||| ||||||||||| |||||||||||   | | |||| || |||| |||| |||| |||||||| |||||  |||||||||  |||||    
T  15884707 ttgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcatgcctcta 15884609  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaac 306  Q
     ||||||||||||||||||| ||| |||||||| |  |||||||||||||||| |||| || |||||||    
T  15884608 cgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaaaccaaaaaaaaaaaac 15884540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 6100429 - 6100587
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| ||||||||||||||||||  ||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  | ||    
T  6100429 tttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccact 6100528  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| |||||||||||||||| || |||| ||| |  | |||||| ||||||| ||||    
T  6100529 acgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaagccaa 6100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 43032858 - 43033011
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||| |||| ||||  | ||||  | |||||||||  ||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  43032858 tttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctct 43032957  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |  |||||||||||||||||| ||| |||||||| |   |||||||||||||||    
T  43032958 acacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 43033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 24837200 - 24837367
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||| |||||  || | |||| || |||| |||| ||||  ||||||||||||| |||||  |||  |||||    
T  24837200 ttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctcta 24837299  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     |||||||| |||||||||||||| |||||||| ||| |||||| ||||||||| |||| || ||||||    
T  24837300 agcacgagcaggattagtcgtccacctttggtg-gatcggaaactggtgcgaaagccaaaaaaaaaaaa 24837367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 10927564 - 10927731
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||| ||||||||||||||| ||  ||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||||||||  |||||    
T  10927564 ttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctcta 10927663  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| |||||||||||||||| || |||| ||| |  |||||||| ||||||| |||| || ||||||    
T  10927664 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagccaaaaaaaaaaaa 10927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 17981399 - 17981551
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||| |||  || |||||| || |||| |||| |||| |||||||| ||||  ||||| ||||  |||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctcta 17981498  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||| || |||||| | ||| |||||||| |  ||||||||||||||||    
T  17981499 cgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaa 17981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 13085481 - 13085607
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||| |||||||||| |||||||||||| || | |||| || |||| ||||||||  ||||||||| || | ||||| ||||| ||||    
T  13085481 tttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctct 13085580  T
Q  237 atgcacgagccggattagtcgtccatc 263  Q
    | ||||||||| ||||| ||| |||||    
T  13085581 acgcacgagccagattaatcgcccatc 13085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 303
Target Start/End: Original strand, 14846533 - 14846698
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||| ||||||| | |||||||||  || | |||| || |||| ||||||||| ||||||| | |||||||||||||||  ||||    
T  14846533 tttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctct 14846631  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaa 303  Q
    | ||| ||| | ||| ||||||||| |||||||| |  ||||| |||||||||| |||| |||||||    
T  14846632 acgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaagccaaaaataaaa 14846698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 3418666 - 3418513
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| |||| |||||||||||||||| ||||||||||||  | | ||||||| |||| ||| | |||||||||||| ||||| ||||||||||   |||    
T  3418666 tttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtct 3418567  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||| | ||||||||||||| |||| ||| |   |||||||||||||||    
T  3418566 acgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaa 3418513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 8141059 - 8141192
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||| || |||||||||||| || | |||| || |||| |||  |||| | |||||||||||| ||||||||||  ||||    
T  8141059 tttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctct 8141158  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| |||| | ||||||||||||  |||||||    
T  8141159 acgcatgagctgaattagtcgtccacatttggtg 8141192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 18373967 - 18374100
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||||||||| | |||| ||  ||| || |||||| |  |||| |||||||||  ||||||||||||  ||||||||||  ||||    
T  18373967 tttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctct 18374066  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| ||||||||||||||||||| ||||||||    
T  18374067 acgcatgagccggattagtcgtccaactttggtg 18374100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 14666223 - 14666071
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||| | |||||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  |||||    
T  14666223 ttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctcta 14666124  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     |||| |||| ||||||||| |||   |||||| |  | ||||||||||||||    
T  14666123 cgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaa 14666071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 22958755 - 22958859
Alignment:
Q  165 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 264  Q
    |||||||||||   ||| |||||||| ||| ||| ||||  ||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||| ||    
T  22958755 ccaaggacgtacctgtggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacct 22958854  T
Q  265 ttggt 269  Q
    |||||    
T  22958855 ttggt 22958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 36914573 - 36914453
Alignment:
Q  150 ggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccgg 249  Q
    |||||| ||||||| | |||||||||  || |||||||||| ||| ||| ||||||||||||||||||| ||||||| |||||| ||||||| |||  ||    
T  36914573 ggcaagaagctccttctaaggacgtactcgggaaatatcgaattcgattttcaggaggaacaacgcttgatcagtgcacatatcactatgcatgagttgg 36914474  T
Q  250 attagtcgtccatctttggtg 270  Q
    ||||||| |||| | ||||||    
T  36914473 attagtcatccaccattggtg 36914453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 13358980 - 13359093
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||| |||||| ||||||||||| |||| || || | ||  ||||| || |||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  13358980 ttgggcttcagtggtaaggagctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctcta 13359079  T
Q  238 tgcacgagccggat 251  Q
     ||||||| |||||    
T  13359080 cgcacgagtcggat 13359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 38922566 - 38922457
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||  |||||||||||||| ||||||||||  || ||    
T  38922566 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgccttta 38922467  T
Q  238 tgcacgagcc 247  Q
     |||||||||    
T  38922466 cgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 43027262 - 43027415
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||| |  |||| ||||||  | | ||||  | |||| |||| |||||||||||||| |||  || |||||||  ||||    
T  43027262 tttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctct 43027361  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||||||||||||||||||||||||| || |  |||||||| |||||||    
T  43027362 acgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaa 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 4479380 - 4479296
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||| ||||||||||  ||||| ||| |||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  4479380 ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 44893431 - 44893315
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||   ||| ||||||| |||||| ||||| ||||  ||||    
T  44893431 tttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctct 44893332  T
Q  237 atgcacgagccggatta 253  Q
    | |||||||||||||||    
T  44893331 acgcacgagccggatta 44893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 45521127 - 45521278
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||| || | ||||||| |||  || | |||| || |||| |||| |||| |||||||| |||| |||||||||||  |||||    
T  45521127 ttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccagg-ggaacaacacttgatcagtgcgcatgcctcta 45521225  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| |||||||||||||||  || ||||| || |  ||||||||||||||||    
T  45521226 cgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaa 45521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 583771 - 583927
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||||||||| || |||||||||||  || |||||| || |||| ||||  ||  |||||||||||||  ||||||||||  ||||    
T  583771 tttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcatgcctct 583868  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||| ||||||||||| ||| ||||| ||   | ||||||||||||||| ||||    
T  583869 acgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagccaa 583927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 304
Target Start/End: Complemental strand, 10535556 - 10535390
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||||||||||| || | ||||    |||| ||| ||||| |||||| ||||||  |||||||||| ||||     
T  10535556 tttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaattttcagg-ggaacaccgcttgaccagtgcgcatgtctcc 10535458  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | ||| |||||| ||||||||| || |||||||  |  |||||| ||||||||| |||| || |||||    
T  10535457 acgcatgagccgaattagtcgttcacctttggtaagtcggaaactggtgcgaaagccaaaaaaaaaaa 10535390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 68251 - 68102
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||| ||||| |||||||||||||||| ||||||||||   || | || |||| |||| ||||||||||||||||||| |||| ||||  ||||  || |    
T  68251 tttgagctccggtggcaaggagctccttccaaggacgtgctcggggaagatcgggttcgattctcaggaggaacaacgtttggccagtatgcatgccttt 68152  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    |  |||||||||||||| |||| || ||||| || |  ||||||||||||    
T  68151 acacacgagccggattaatcgttcacctttgatgggtcggaaaccggtgc 68102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 2964034 - 2964191
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||| ||||||||| ||||||| ||||| |||||  || | |||| || |||| ||||  | |||||||||||||||| || || ||||  |||||    
T  2964034 ttggactctagtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctcta 2964133  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     |||||| |||||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  2964134 cgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 2964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 22810037 - 22810129
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||   || |||| |||| |||| | || |||||||||||||||||||||||||    
T  22810037 tttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattccctgg-ggaacaacgcttggtcagtgcgcat 22810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 33401952 - 33401823
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||||||  ||||||||||  || | |||| || |||| ||| ||||| |||||||| ||||  ||||| ||||  ||||    
T  33401952 tttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctct 33401853  T
Q  237 atgcacgagccggattagtcgtccatcttt 266  Q
    | ||| ||| ||||||||||| ||| ||||    
T  33401852 acgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 1013129 - 1013009
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||  | |||||||||||| || | |||| || |||| |||| |||| |||||||||||||| |||| | |||  |||||    
T  1013129 ttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctcta 1013030  T
Q  238 tgcacgagccggattagtcgt 258  Q
     ||| |||||| |||| ||||    
T  1013029 cgcatgagccgaattaatcgt 1013009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 7673803 - 7673657
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||||| ||||||||||||  | | |||||| ||||| |||   ||| ||||||||| ||||  |||| ||||  ||||| ||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgatt---agggggaacaacgtttggctagtgtgcatgcctctacgc 7673707  T
Q  241 acgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    ||||||||||||  ||| |||||||| ||| ||| | ||||||||||||||    
T  7673706 acgagccggatttttcgcccatctttagtg-gatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 6940515 - 6940609
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcata 231  Q
    ||||||||||||||| ||||||||| | ||||||| |||| ||  |||||||| |||| |||  |||| ||||||||||||||  ||||||||||    
T  6940515 tttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcata 6940609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 9860149 - 9860015
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgc-gtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    |||||| ||||||||||| |||||||| |||||||||||| | | | |||| || |||| |||| |||| |||||||| ||||| ||||| ||||  |||    
T  9860149 tttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctc 9860050  T
Q  236 tatgcacgagccggattagtcgtccatctttggtg 270  Q
    ||  || ||||| ||||||||||||| | ||||||    
T  9860049 tacacatgagccagattagtcgtccaccattggtg 9860015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 13358047 - 13357941
Alignment:
Q  199 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaa 298  Q
    |||||| ||||||||| |||| || || ||||  ||||||||||||||||||||||||||||  |||| ||| |  |||||||||||| ||| |||| ||    
T  13358047 ctcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgcaaaaaccaaaaa 13357948  T
Q  299 taaaaaa 305  Q
     ||||||    
T  13357947 aaaaaaa 13357941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 16893895 - 16894050
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||  ||||||||||| ||||| |||| ||||||| || | ||||||| |||| |||| |||| |||| ||||||||| |||| | |||  || ||    
T  16893895 ttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgccttta 16893994  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||| |||||||||| |||| ||| |||||||| |  |||||||||||||||| ||||    
T  16893995 cgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaagccaa 16894050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 8997696 - 8997544
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||||||||||||||| |||||  ||||||| ||| || | |||| || |||| ||||  | | ||||||||| || | |||| |||||  || ||    
T  8997696 ttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttcgcatgcctata 8997597  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||| |||||||||| ||||||||||| |  ||||||||||||||||    
T  8997596 cgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaa 8997544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 34613931 - 34613819
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||||| ||||   ||||| || | ||||||| |||| |||| ||||||||||||||  ||| |||| |||||  ||||    
T  34613931 tttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctct 34613832  T
Q  237 atgcacgagccgg 249  Q
    || || |||||||    
T  34613831 atacatgagccgg 34613819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 23895595 - 23895678
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||| ||||||||||| ||||| |||||||  |||||| ||||||| ||||| || |  |||||| |||||||||    
T  23895595 gaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaacgggtgcgaaa 23895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 308
Target Start/End: Original strand, 26570881 - 26571052
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||||||||  ||   ||||| ||||  | ||||||||| |||| ||||  ||| |||||||||||||| ||||| | ||   |||    
T  26570881 tttgggctctagtggcaaggagcgacttttaaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatct 26570980  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaacga 308  Q
    | ||| ||||||||||||||||||| ||||| || |  |||||||| || |||| |||| || ||| |||||    
T  26570981 acgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaagccaaaaaaaaataacga 26571052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 35496406 - 35496278
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||||||||||||| |  ||||||||||| || | ||||||  |||| ||| ||||  | |||||| ||||||||||||||||  |||||    
T  35496406 ttgggctccggtggcaaggagctcatttcaaggacgtat-cgaggaatatcaggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctcta 35496308  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     | |||||| |||||| ||| ||| |||||    
T  35496307 cgtacgagctggattaatcgcccacctttg 35496278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 8587034 - 8586978
Alignment:
Q  195 tattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 251  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||| ||| |||||||||    
T  8587034 tattcccagggggaacaacgcttggccagtgcgcatacctctacgcatgagccggat 8586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 18091358 - 18091477
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||  | ||||||||| |  ||||||||| | | ||| ||||||| ||  ||||||| |||  ||||||||||  ||||    
T  18091358 tttgggctccagtggcaaggagcttattccaaggacgcacccgtgaaataccaaattcaattctca-gaaaaacaacgtttgaccagtgcgcatgcctct 18091456  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||||||| || ||||||||    
T  18091457 acgcacgaggcgaattagtcg 18091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 44031593 - 44031505
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtg 225  Q
    |||| |||| ||||||||||| ||||| ||||||| |||  || ||||||||| |||| |||  |||| |||||||||||||| |||||    
T  44031593 tttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtg 44031505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 8803096 - 8803178
Alignment:
Q  222 agtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    |||||||| | ||||| ||||||||||||||||||| |||||  ||||| |  |||||||| ||||||| |||| || |||||    
T  8803096 agtgcgcagacctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaa 8803178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 34846771 - 34846809
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  34846771 tttgggctccagtggcaaggagctcattccaaggacgta 34846809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 21174167 - 21174215
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 255  Q
    ||||||||||||||||||||||||  ||||| |||  ||||||||||||    
T  21174167 gaacaacgcttggtcagtgcgcatggctctacgcatcagccggattagt 21174215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 21898606 - 21898773
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  |||||    
T  21898606 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 21898705  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| |||||||||||||||| || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  21898706 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 21898773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 13036156 - 13036004
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | ||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  |||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctcta 13036057  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||| |||||||||||||   |||||| |  ||||||||||||||||    
T  13036056 cgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaa 13036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 2271453 - 2271326
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| ||||||||   ||||||||||| | |||||||||| ||||||    
T  2271453 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcaga--gaacaacgcttagccagtgcgcatgtctcta 2271356  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     ||||||||||||||||||||||| |||||    
T  2271355 cgcacgagccggattagtcgtccacctttg 2271326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 6606241 - 6606082
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    |||||||||||||||||| |||||||||||| || | |||| || |||| ||||||||| |||||||| ||||| |||||  |||  ||||| ||| |||    
T  6606241 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgag 6606142  T
Q  246 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||||||||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  6606141 ccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 6606082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 14107511 - 14107353
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||| ||||||| || | |||| || |||| |||| ||||||||||||||||||  |||||| |||  ||||    
T  14107511 tttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctct 14107412  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||||||||||||||| ||||  || ||| |  |||||||||||||||| ||||    
T  14107411 acgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaagccaa 14107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 5253375 - 5253223
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||| ||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  5253375 ttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 5253276  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||| ||| ||| |||||||| |  ||||||||||||||||    
T  5253275 cgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaa 5253223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 30788996 - 30788839
Alignment:
Q  145 ccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacga 244  Q
    ||||||||||||||||||| ||||||| |||| || | ||||||| |||  ||||||| |  |||||||| |||| ||||||||||  ||||| ||||||    
T  30788996 ccagtggcaaggagctccttccaaggatgtatccggggaatatcgggtttgattctcatg--gaacaacgtttggccagtgcgcatgcctctaggcacga 30788899  T
Q  245 gccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    ||||||||||||| ||| |||||||| |  |||||||||||||||| |||| || |||||    
T  30788898 gccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaa 30788839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 13468891 - 13469048
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||  |||||||||||||||| |||||||||||| || | |||| |  |||| ||||  ||| ||||||||| ||||||||||| |||  |||||    
T  13468891 ttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctcta 13468990  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||||||||| ||||||||| ||| | |||||| | ||||||||||||||||| ||||    
T  13468991 cgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaagccaa 13469048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 3601042 - 3601194
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| |||||||| |||||| | ||||  |||||| || | |||| ||  ||| ||||||||| |||||||||||||| ||||||||||  || ||    
T  3601042 ttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctata 3601141  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
      |||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  3601142 cacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 3601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 304
Target Start/End: Original strand, 19089456 - 19089622
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||| ||||||||||| |  ||||||||||| || | |||| |  |||  |||| |||| |||||||| ||||| ||||| ||||  |||||    
T  19089456 ttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctcta 19089555  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
     ||||||||||||||||||||| | |||||||| |  |||||||||||||||| |||| || |||||    
T  19089556 cgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaa 19089622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 12606451 - 12606554
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 300  Q
    |||| ||||||||| |||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||| || |    
T  12606451 cagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaagccaaaaaaa 12606550  T
Q  301 aaaa 304  Q
    ||||    
T  12606551 aaaa 12606554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 8612127 - 8611969
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||    
T  8612127 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 8612028  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || |||||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  8612027 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 8611969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 19230710 - 19230579
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||  || ||| || ||  ||| ||| ||| | |||||||||||||||||||  ||||  ||||    
T  19230710 tttgggctccagtggcaaggagctccttccaaggacgtactcgggaa-taccggattcgattttcaag-ggaacaacgcttggtcagtatgcatgcctct 19230613  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | |||||||||||||||||||| |||| ||||||    
T  19230612 acgcacgagccggattagtcgttcatcattggtg 19230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 295
Target Start/End: Complemental strand, 29444917 - 29444760
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||||| |||| ||||||  || |  ||| || |||| |||   ||| |||||||||||||| ||||||||||  |||||    
T  29444917 ttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctcta 29444818  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||| ||||||||||||| |||||||||||||| |  ||||||  |||||||| ||||    
T  29444817 cgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagccaa 29444760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 295
Target Start/End: Original strand, 8932624 - 8932776
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||||||||||||| |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| |||     
T  8932624 ctccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcat 8932723  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||||||| ||  ||| ||||| || |  |||||||||||||||| ||||    
T  8932724 gagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagccaa 8932776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 295
Target Start/End: Original strand, 8944090 - 8944242
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||||||||||||| |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| |||     
T  8944090 ctccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcat 8944189  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||||||| ||  ||| ||||| || |  |||||||||||||||| ||||    
T  8944190 gagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagccaa 8944242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 9633708 - 9633620
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  |||||||||||||||| ||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaa 9633620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 10311621 - 10311514
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||| ||||||||||||| ||||| |||||| || | |||| || |||| || |||| | |||||||||||||| |||||||||| ||||||    
T  10311621 ttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctcta 10311522  T
Q  238 tgcacgag 245  Q
     |||||||    
T  10311521 cgcacgag 10311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 34954771 - 34954642
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||||||||||| |||||||||||   | | |||| |  |||| ||||||||| ||||||||| |||| |||||| |||| ||||    
T  34954771 tttgggctcca-tggcaaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctct 34954673  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||| ||||| ||||||||||||| |||||    
T  34954672 acgcatgagccagattagtcgtccacctttg 34954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 9179889 - 9179756
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||| | |||||||||||  |  | |||| || |||| |||| |||| |||||||| ||||  ||||  ||||| ||||    
T  9179889 tttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctct 9179790  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| |||| |||||||||||||| ||||||||    
T  9179789 acgcatgagctggattagtcgtccacctttggtg 9179756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 8938668 - 8938821
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| |||||||||||| |||| ||| ||| || | ||||    |||| |||| ||||||||||||| ||||  |||||||||    |||    
T  8938668 tttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatct 8938767  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||| |||||||||||| ||||| || |  ||||||||||||||||    
T  8938768 acgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 8938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 305
Target Start/End: Original strand, 5029818 - 5029942
Alignment:
Q  181 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 280  Q
    |||| |||| |||| |||||||||  |||||||| |||||||||||||||  ||||| ||| |||  |||||||||| ||||||||| || |  ||||||    
T  5029818 gaaacatcgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaac 5029917  T
Q  281 cggtgcgaaacccaagaataaaaaa 305  Q
     ||||||||| |||| || ||||||    
T  5029918 tggtgcgaaagccaaaaaaaaaaaa 5029942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 9366575 - 9366459
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||| |||||||||||| ||||||| |||   | | ||||||  |||| ||| | ||| |||| ||||||||| ||||||||||  |||||    
T  9366575 ttgggctccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctcta 9366476  T
Q  238 tgcacgagccggattag 254  Q
     ||||||||||||||||    
T  9366475 cgcacgagccggattag 9366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 24672018 - 24671896
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||||||||  |||||||||||  |   |||| || ||||||||| |||  |||||||| ||||  ||||| ||||  |||||    
T  24672018 ttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctcta 24671919  T
Q  238 tgcacgagccggattagtcgtcc 260  Q
     |||| |||||||||||| ||||    
T  24671918 cgcacaagccggattagtagtcc 24671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 30410453 - 30410569
Alignment:
Q  188 cgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcg 287  Q
    ||||||| |||||||||||||||||| |||   ||||||||||  ||||| ||| |||| |||||| |||  ||||||||||| |  |||||||| ||||    
T  30410453 cgagttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcg 30410552  T
Q  288 aaacccaagaataaaaa 304  Q
    ||| | || ||||||||    
T  30410553 aaagcaaaaaataaaaa 30410569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 12635782 - 12635929
Alignment:
Q  148 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 247  Q
    ||||||||  |||||| |||||||||||| || | |||| |  |||  |||| |||| | ||||||||||||  |||||||||  ||||| |||| ||||    
T  12635782 gtggcaagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagcc 12635881  T
Q  248 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||| |||   |||||| |  |||||||||||||||| ||||    
T  12635882 ggattagtcgcccactattggtgggtcggaaaccggtgcgaaagccaa 12635929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 3030771 - 3030693
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 215  Q
    ||||||||||||||||||||||||| | ||||||||||||    | ||||||| |||| |||| |||| ||||||||||    
T  3030771 tttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcccagggggaacaacgc 3030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 3588098 - 3587976
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||||||| |  | |||| ||||||| ||   |||| || |||| |||| || | |||||||||||||| |||||| |||| ||||    
T  3588098 tttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctct 3587999  T
Q  237 atgcacgagccggattagtcgtc 259  Q
    | ||| || ||||||||||||||    
T  3587998 acgcatgaaccggattagtcgtc 3587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 10396499 - 10396549
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 256  Q
    ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  10396499 ggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtc 10396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 33939972 - 33940098
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||| ||| |||||||| || | |||||||||| || | ||||  | |||  |||||||||||||||||  |||   || |||||||  |||||  |    
T  33939972 ggctccaatggaaaggagctacttctaaggacgtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacac 33940071  T
Q  241 acgagccggattagtcgtccatctttg 267  Q
    |||||||||||||||||||||||||||    
T  33940072 acgagccggattagtcgtccatctttg 33940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 5759586 - 5759663
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 215  Q
    |||||||||||||||||||| ||||| |||||||||||  || | ||||||| |||  ||||  ||||||||||||||    
T  5759586 ttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtttgattccgaggaggaacaacgc 5759663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 8149843 - 8149782
Alignment:
Q  244 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||| |||||||||||| |||||||| | ||||||||||||||||| |||| || ||||||    
T  8149843 agccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaaaccaaaaaaaaaaaa 8149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 9147258 - 9147379
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||| ||||||||| | |||||||||||   | | ||||||| |||| |||| |||| ||||| || ||||  |||||| |||  ||||    
T  9147258 tttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctct 9147357  T
Q  237 atgcacgagccggattagtcgt 258  Q
    | |||  |||||||||||||||    
T  9147358 acgcataagccggattagtcgt 9147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 17115049 - 17114920
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||| ||||||| |||||||||||   |   ||||| || ||| ||||  || ||||||||||||||| || ||  |||  |||||    
T  17115049 ttgggctccagtggcaagaagctccttccaaggacgtacatggagaatattgaattcgattcctagaaggaacaacgcttggccaatggacatgcctcta 17114950  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     ||| ||||||||||||||| ||| |||||    
T  17114949 cgcatgagccggattagtcgcccacctttg 17114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 11142560 - 11142728
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||  ||||| |||| ||||| | |||||||| ||  || |||||| ||||||| |||| |||  | ||||||| |||  ||||||||||  ||||    
T  11142560 tttgggcctcagtgacaagaagctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctct 11142659  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | ||| ||| | ||||||| ||||| |||||||| |  ||| |||||||||||| |||| || ||||||    
T  11142660 acgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaaaccaaaaaaaaaaaa 11142728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 32157251 - 32157187
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    |||||||| ||||  ||||||||||| ||||| ||| ||||| |||||||| |||||||||||||    
T  32157251 ggaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtg 32157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 8888910 - 8888969
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 267  Q
    ||||||| |||| ||||||||||| ||||| ||| ||| ||||||||||||||| |||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttg 8888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 14783477 - 14783415
Alignment:
Q  233 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||| ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  14783477 ctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaa 14783415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 15643980 - 15643942
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtat 176  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15643980 ttgggctccagtggcaaggagctcattccaaggacgtat 15643942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 31129193 - 31129287
Alignment:
Q  196 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| ||| ||||||||||  |||||||||  ||||| ||| ||||| ||||||| || || |||||||| |  ||||||||||||||||    
T  31129193 attcacagggggagcaacgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaa 31129287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 21016903 - 21016866
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  21016903 ttgggctccagtggcaaggagctccttccagggacgta 21016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 13391312 - 13391368
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccat 262  Q
    ||||||| | |||| ||||||||||  ||||| ||||||||||||||||||| ||||    
T  13391312 ggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccat 13391368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 40781012 - 40780861
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    |||||||||||||||||||||| ||   |||||||||| ||  |||||||| |||| ||||||| | |||||||||||||||||||||||||  |||||     
T  40781012 tgggctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctac 40780913  T
Q  239 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||| ||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  40780912 gcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 38165985 - 38166138
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||||||||||| |||||||||||| || | ||||  | |||  |||| |||| |||||||||||||| ||||||||||  ||||    
T  38165985 tttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctct 38166084  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  38166085 acgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 38166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 29895746 - 29895898
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  29895746 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 29895845  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||||||||||| | ||||||    ||||||||||||||||    
T  29895846 cgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaa 29895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 288
Target Start/End: Complemental strand, 1940927 - 1940779
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||    
T  1940927 tttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctct 1940831  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 288  Q
    | ||||||||||||||||||| ||| |||||||| |  | ||||||||||||    
T  1940830 acgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 1446785 - 1446908
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  1446785 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 1446884  T
Q  238 tgcacgagccggattagtcgtcca 261  Q
     ||| |||||||||||||||||||    
T  1446885 cgcatgagccggattagtcgtcca 1446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 53599018 - 53599185
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||||||||||| |||||||||||  || | |||| || |||| |||| |||||||||||||| |||| ||||||||||  ||||    
T  53599018 tttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctct 53599117  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | ||| ||||||||||| |||| || |||| ||| ||| |||||||||||||||| |||| || |||||    
T  53599118 acgcatgagccggattaatcgttcacctttagtg-gatcggaaaccggtgcgaaagccaaaaaaaaaaa 53599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 290
Target Start/End: Complemental strand, 42722724 - 42722577
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||||||  |||||||||| |||||||||||  || |||||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| |||     
T  42722724 ctccagtggttaggagctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 42722625  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||||| || |||| ||| |  | ||||||||||||||    
T  42722624 gagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaa 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 2559265 - 2559418
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||||| |||||||||||   | | |||| ||  ||| |||   |||||||||||||||||| ||||||||||  ||||    
T  2559265 tttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctct 2559364  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | |||| |||||||||| ||||||| |||||||| |  ||||||||||||||||    
T  2559365 acgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaa 2559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 5473001 - 5472868
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||| |  ||||||||||| || | |||| |  |||  ||||||||| | |||||||||||| ||||||||||  ||||    
T  5473001 tttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctct 5472902  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||||||||||||||||||| ||| ||||||||    
T  5472901 acgcacgagccggattagtcgcccacctttggtg 5472868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 52950040 - 52950193
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||||| |||||||||||   | | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  52950040 tttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactct 52950139  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |  || || || ||||||||||||| |||||||| |  |||||||| |||||||    
T  52950140 acacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaa 52950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 270
Target Start/End: Original strand, 7741884 - 7742016
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| |||||||||||||||||  |||| |||||| || | ||||||| |||| | ||||||| | |||||||||||| |||||| |||  |||||    
T  7741884 ttgggctctagtggcaaggagctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctcta 7741983  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     |||||| || ||||||||||||||||||||||    
T  7741984 cgcacgatccagattagtcgtccatctttggtg 7742016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 8888980 - 8889128
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| || |||||||||||||| | |||||||||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  8888980 tttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctct 8889079  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtg 285  Q
    | ||| ||||||||||||||||||| |||||||| |  |||||||||||    
T  8889080 acgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 47078417 - 47078569
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||| |||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| |||||| |||  |||||    
T  47078417 ttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctcta 47078516  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     |||||||||||||||||||  || | |||||| |  ||||||| ||||||||    
T  47078517 cgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaa 47078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 55920993 - 55921145
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||||| |  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  |||||    
T  55920993 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctcta 55921092  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     | | ||||||||||| |||  || |||||||| |  ||||||||||||||||    
T  55921093 cgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaa 55921145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 6779169 - 6779302
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||| || |||||||||||   |   |||| || |||| |||| |||| |||||||| | ||| ||||||||||  ||||    
T  6779169 tttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctct 6779268  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    ||||| ||||||||||||||||||| ||||||||    
T  6779269 atgcatgagccggattagtcgtccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 38075391 - 38075544
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||| ||||||||| |||| |||||||||||| ||   |||| || |||| ||||||||| | |||||||||||| ||||||||||  ||||    
T  38075391 tttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctct 38075490  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||| |||| | ||||| |||||||| |  |||||||| |||||||    
T  38075491 acgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaa 38075544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 43458572 - 43458724
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||| ||||| | ||||||||||||  | | ||||  |  ||| |||| ||||||||| ||||||||| ||||||||||  |||||    
T  43458572 ttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctcta 43458671  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     | ||||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  43458672 cggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaa 43458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 36145362 - 36145200
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||| |||||||||||||| | |||||||||||  || | |||| || |||| |||| |||| | ||||||||||| |||||||||||  |||||  ||     
T  36145362 ctccggtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacat 36145263  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||||||||||||| ||||| ||    |||||||||||||||| |||| || ||||||    
T  36145262 gagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaagccaaaaaaaaaaaa 36145200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 4738640 - 4738744
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 300  Q
    ||||||||||||||||| | |||||||||| |||||| ||| |||| | |||||||||||| |||||||| |  |||||||||||||||| |||| || |    
T  4738640 caggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaa 4738739  T
Q  301 aaaaa 305  Q
    |||||    
T  4738740 aaaaa 4738744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 13552072 - 13552148
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 213  Q
    ||||||||||||||||||||||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  13552072 tttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 295
Target Start/End: Original strand, 20128273 - 20128425
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||| ||||||||| |||| |||||||||||| || | ||||  | |||| ||||||||| ||||||| |||||| ||||||||||  || || ||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||  ||||||||||||| | |||||| |   ||||||||||||||| ||||    
T  20128373 gagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaagccaa 20128425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 27248387 - 27248516
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||| |||||||| |||||||||||| || | |||| || |||| | || ||||||||||||||||||| ||  ||||||  |||||    
T  27248387 ttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctcta 27248484  T
Q  238 tgcacgagccggattagtcgtccatctttggt 269  Q
     ||| ||||| ||||||||| ||| |||||||    
T  27248485 cgcaggagccagattagtcgcccacctttggt 27248516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 48317427 - 48317279
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||| |||||| | |||| ||||||| ||  |||||  |  ||| ||| |||||||||||||||||||||||||| | ||  |||||    
T  48317427 ttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctcta 48317328  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
     ||||||||||||||||||| ||| | ||| || | |||||||| ||||    
T  48317327 cgcacgagccggattagtcgcccaccgttgatgggttggaaaccagtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 3574598 - 3574479
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||     | |||| ||||||| |||| ||||  ||||||| ||||| ||||||||||  |||||    
T  3574598 ttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctcta 3574499  T
Q  238 tgcacgagccggattagtcg 257  Q
     ||||||| |||||||||||    
T  3574498 cgcacgagtcggattagtcg 3574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 6032792 - 6032643
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| ||| ||||||||    |||||||  |||||| |||  |||||    
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattttcaggagg---tacgcttgaccagtgctcatgcctcta 6032696  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     | | ||||||||||||||||| | |||||||| |  ||||||||||||||||    
T  6032695 cgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 13073496 - 13073654
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||| |||||||| |||||||||||   |   |||| ||||||| |||| || | ||||||| | |||| ||||||||||| ||||    
T  13073496 tttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctct 13073595  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || || ||||||||||  | |||||||| |  |||||||||||||||||||||    
T  13073596 acgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaacccaa 13073654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 33647680 - 33647837
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| |||||||||||||||||  |||||||||||  | | |||| || |||| |||  ||||  ||||||||||||  |||||| |||  |||||    
T  33647680 ttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctcta 33647779  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 295  Q
     |||||| || |||||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  33647780 cgcacgaaccagattagtcgttcatctttggtg-gatcggaaaccggtgcgaaaaccaa 33647837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 38168227 - 38168372
Alignment:
Q  149 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 248  Q
    ||||||||||||||| |||||||||||  || | |||| |  |||| ||||  | |||||||||||||||| |||||| |||  ||||| ||| ||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccg 38168325  T
Q  249 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||| || |||| ||| | ||||||||||||||||| ||||    
T  38168326 gattagtcgttcacctttagtgggttggaaaccggtgcgaaagccaa 38168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 295
Target Start/End: Complemental strand, 49260806 - 49260660
Alignment:
Q  149 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 248  Q
    ||||||||| ||||| ||||||| |||| || | ||||  || ||| |||| || | |||||||||||||| ||||||||||  ||||| ||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  249 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||||||| ||| |||||||| |  ||||| |||||| ||| ||||    
T  49260706 gattagtcgaccacctttggtgggtcggaaatcggtgcaaaagccaa 49260660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 24166409 - 24166561
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | ||||  | |||| |||| || | | ||||||| |||| ||||||||||  |||||    
T  24166409 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctcta 24166508  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
     ||||||||| ||||||||  ||| ||||| || ||| ||||||||||||||||    
T  24166509 cgcacgagccagattagtcacccacctttgatg-gatcggaaaccggtgcgaaa 24166561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 41163034 - 41162905
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||| |||||||||||| |||||||||||| || |||||| ||||||| |||  |||  |||||||| ||||| |||||  |||   ||||    
T  41163034 ttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttcta 41162935  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
    |||| |||||| |||||||| ||| |||||    
T  41162934 tgcatgagccgaattagtcgcccacctttg 41162905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 289
Target Start/End: Complemental strand, 295685 - 295534
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||| | ||| | |||||||||| || | |||| |   ||| |||| ||| |||||||||| |||| ||||||||||  ||||    
T  295685 tttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcatgcctct 295587  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaa 289  Q
    | |||||| || ||||||||||||| | |||||| | | ||||||||||||||    
T  295586 acgcacgaaccagattagtcgtccaccgttggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 7246730 - 7246646
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  7246730 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 7246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 49952292 - 49952145
Alignment:
Q  144 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 243  Q
    |||| ||||||||||||||| |||||||||||| || |||||||   |||  ||| |||| || ||||||| ||||||||||||||   ||||| ||| |    
T  49952292 tccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcgcacgcctctacgcatg 49952193  T
Q  244 agccggattagtcg-tccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||||   || ||||| || | |||||||||||||||||    
T  49952192 agccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaa 49952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 14123974 - 14124127
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||| ||||||| ||||| |||||   | | |||| |  |||| |||| |||| ||||||||  |||| ||||||||||  ||||    
T  14123974 tttgggctccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctct 14124073  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |  ||||||||||||||||||  || | |||||| | |||||||||||||||||    
T  14124074 acacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaa 14124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 29588695 - 29588812
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||| | |||| |||||   || |||||| || |||| |||| |||| | ||||| ||||||  |||||||||  |||||    
T  29588695 ttgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctcta 29588794  T
Q  238 tgcacgagccggattagt 255  Q
     |||||||||||||||||    
T  29588795 cgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 270
Target Start/End: Complemental strand, 36262913 - 36262787
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||||||||||||| ||||||| |||||||||||  ||   |||| || |||| |||| ||||  ||||||||||||| |||||| |||  ||||| |||    
T  36262913 gctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg--gaacaacgcttggccagtgcacatgcctctacgca 36262816  T
Q  242 cgagccggattagtcgtccatctttggtg 270  Q
    |||| ||||||||||| ||| ||||||||    
T  36262815 cgagtcggattagtcgcccacctttggtg 36262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 7000482 - 7000630
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| |||||||||| ||||||| |||||||||||  || | |||| ||||||| |||| ||||| ||||||||||||| || || ||    ||||    
T  7000482 tttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacgcttggccaatgtgc----ctct 7000577  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||| |||||||||  || ||||||||   || ||||||||||||||    
T  7000578 acgcacgagccagattagtcgctca-ctttggtggattgaaaaccggtgcgaaa 7000630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 20532561 - 20532429
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| |||||||||||||| |||| | |||||| | ||  ||   |||| ||||||| |||  ||||||||||||||||||| ||||||||||  |||||    
T  20532561 ttggactccagtggcaaggtgctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctcta 20532462  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||| ||||||||| ||||| ||| ||||||||    
T  20532461 cgcatgagccggataagtcgcccacctttggtg 20532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 21429279 - 21429411
Alignment:
Q  157 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 256  Q
    ||||||| |||| ||||||| || | ||||||| |||| ||| | ||| ||||||||| || | ||||||||||  ||||| ||||||| | || |||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtc 21429378  T
Q  257 gtccatctttggtgtgatggaaaccggtgcgaa 289  Q
    ||||| |||||||| |  |||||||||||||||    
T  21429379 gtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 16450312 - 16450411
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||| |||||||||||||| |||||| |||  ||||| ||| ||||| ||||||||||||| |||||||  |  ||||||||||||||||    
T  16450312 gttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaa 16450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 14859312 - 14859402
Alignment:
Q  200 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||||||| |||||||| |||| ||||| ||||  |||||| |||||||||    
T  14859312 tcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 18531541 - 18531635
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||| |||||||| ||||||||||||||||  ||| |||||||| || ||||| ||||||| |||| ||| |  |||||||||||||||| ||||    
T  18531541 cagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaaccggtgcgaaagccaa 18531635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 47682475 - 47682382
Alignment:
Q  196 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||| |||| |||| |||| |||||| ||| |||||| ||||||||||| ||||||| ||| |||||||| |  ||||||||||||||||    
T  47682475 attctcagg-ggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaa 47682382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 15840083 - 15839935
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||||| |||||||||||   | | |||| || |||| |||| |  || ||| |||| |||| ||||||||||  ||||| ||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattc-ctagaagaataacgtttggccagtgcgcatgcctctacgc 15839985  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||||||||| || |||||| |  | |||||||| ||||||||    
T  15839984 atgagccggattagtcgcccttctttgataggttggaaaccagtgcgaaa 15839935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 255
Target Start/End: Original strand, 33109280 - 33109400
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgct--tggtcagtgcgcatatct 234  Q
    ||||||||| |||||| || ||||||| ||||||| |||| || |  |||||| |||| |||| || || ||||||||||  ||| |||| ||||| |||    
T  33109280 tttgggctctagtggcgagaagctccttccaaggaggtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtct 33109379  T
Q  235 ctatgcacgagccggattagt 255  Q
    ||| |||||||||||||||||    
T  33109380 ctacgcacgagccggattagt 33109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 12703697 - 12703569
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||| |||| | |||||||||  || | ||||  |||||| |||  |||  |||||||||||||  ||||| | || ||||||    
T  12703697 ttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgtgtatgtctcta 12703598  T
Q  238 tgcacgagccggattagtcgtccatcttt 266  Q
     |||  |||||||||||||| ||||||||    
T  12703597 cgcataagccggattagtcgcccatcttt 12703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 20354595 - 20354719
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||| ||||| ||||||||| |  ||  ||||| ||||||  |||  ||||  |||||||||||||  |||||||||  ||||    
T  20354595 tttggactccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctct 20354694  T
Q  237 atgcacgagccggattagtcgtcca 261  Q
    | ||| ||| |||||||||||||||    
T  20354695 acgcatgagtcggattagtcgtcca 20354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 270
Target Start/End: Original strand, 30317200 - 30317324
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    ||||||||||||| ||||   |||||||||  || | ||||||  |||| ||||||||  |||||||||||||| |||| || ||  ||||| |||||||    
T  30317200 cagtggcaaggagttccttttaaggacgtactcggggaatatcaggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgag 30317299  T
Q  246 ccggattagtcgtccatctttggtg 270  Q
    ||| |||||||| ||| ||||||||    
T  30317300 ccgaattagtcgcccacctttggtg 30317324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 41339548 - 41339428
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||   |||| || |||| | || || | |||||||||||||| ||||| | ||  ||||    
T  41339548 tttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctct 41339449  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||||||| |||||||||||    
T  41339448 acgcacgagacggattagtcg 41339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 43468359 - 43468458
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||| |||||||||||||| |||||| ||| |||||| ||| ||||||||||||||| ||| |  ||||| |  ||| ||||||||||||    
T  43468359 gttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgcgaaa 43468458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 15829657 - 15829810
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| ||||||||| ||  ||||||||||| ||   |||||| ||||  ||| ||||| | | |||| ||||| ||||||||||   |||    
T  15829657 tttgggctccagtgacaaggagcttctttcaaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttct 15829756  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    | ||| |||||||||||||| |||| | |||||| |||  |||||||||||||||    
T  15829757 aggcatgagccggattagtcctccaccattggtg-gatcagaaaccggtgcgaaa 15829810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 263
Target Start/End: Complemental strand, 26480102 - 26479976
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| ||||||||||||||| ||||| |||||   | | |||| ||||||| ||||| | | |||| ||| ||||| |||| |||||  ||||    
T  26480102 tttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattcttaaggggaataacacttggccagtacgcatgcctct 26480003  T
Q  237 atgcacgagccggattagtcgtccatc 263  Q
    | ||| |||||| |||| |||||||||    
T  26480002 acgcatgagccgaattaatcgtccatc 26479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 55703834 - 55703776
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 266  Q
    ||||||| ||||||||||||||| |||| |  |||||||||||||||| ||||||||||    
T  55703834 aacaacgtttggtcagtgcgcatgtctcaacccacgagccggattagttgtccatcttt 55703776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 3159558 - 3159473
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||||||| |||||||||  || | |||||| |  ||||||||||||    
T  3159558 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 3507297 - 3507361
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    ||||||||||||||  ||||||| |  |||||  |||||||||||||||||||||| ||||||||    
T  3507297 ggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtg 3507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 14077963 - 14078023
Alignment:
Q  196 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 256  Q
    |||| |||||| |||| | |||||||||||||||| |||||| ||||||| ||||||||||    
T  14077963 attcacaggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 55005459 - 55005339
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||  ||||||| |||||||| |||| |||||||  | |||||| ||| ||| |||| |||| | |||||||||||  || |||||||  ||||    
T  55005459 tttgggctctggtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctct 55005360  T
Q  237 atgcacgagccggattagtcg 257  Q
    | |||| || |||||||||||    
T  55005359 acgcacaagtcggattagtcg 55005339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 17080070 - 17080121
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 257  Q
    |||||||||||||| ||||||||||  ||||| ||| |||||||||||||||    
T  17080070 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 17080121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 19651598 - 19651559
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtat 176  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  19651598 tttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 31588642 - 31588764
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgct--tggtcagtgcgcatatct 234  Q
    |||||||| ||||| |||||||||| | | |||||||||| || | ||||| | |||  |||| |||  | |||||||||  ||| |||||||||| |||    
T  31588642 tttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaatattgggtttgattcccagaggaaacaacgctcttggccagtgcgcatgtct 31588741  T
Q  235 ctatgcacgagccggattagtcg 257  Q
    ||| ||| |||||||||||||||    
T  31588742 ctacgcatgagccggattagtcg 31588764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 42722463 - 42722408
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 261  Q
    |||||||| ||||  ||||||||||| ||||||||| ||| |||||||||||||||    
T  42722463 ggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtcca 42722408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 255
Target Start/End: Original strand, 48656176 - 48656295
Alignment:
Q  137 tttgggctccagtggcaaggagctccta-ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    |||||||||||||||||||  ||||||  |||||||||||  || ||||||||| | || |||| ||||| ||||||||||||  | |||| |||  |||    
T  48656176 tttgggctccagtggcaagacgctcctttccaaggacgtacccgagaaatatcgggctcaattcccaggaagaacaacgcttgacctgtgcacatgcctc 48656275  T
Q  236 tatgcacgagccggattagt 255  Q
    | |||| |||| ||||||||    
T  48656276 tctgcatgagctggattagt 48656295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 15732601 - 15732448
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| |  | || |||||||||||| ||   |||| || |||| ||||  | | |||||||| ||||| |||||| |||  ||||    
T  15732601 tttgggctccagtggcaagaaaattcttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctct 15732502  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    | ||||| ||  |||||||||  ||||||||||| ||| ||||||||||||||||    
T  15732501 acgcacgggctagattagtcgctcatctttggtg-gatcggaaaccggtgcgaaa 15732448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 34667755 - 34667717
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  34667755 tttgggctctagtggcaaggagctccttccaaggacgta 34667717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 14567210 - 14567247
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||| | |||||||||||    
T  14567210 ttgggctccagtggcaaggagctcattccaaggacgta 14567247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 27531809 - 27531772
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  27531809 ttggactccagtggcaaggagctccttccaaggacgta 27531772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 40272484 - 40272391
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    |||||||||| |||| ||||||||| | |||| || |||| || | ||||||| |||| |||  || | |||||||||||||| ||||||||||    
T  40272484 tttgggctccggtggtaaggagctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcat 40272391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 48015157 - 48015108
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 255  Q
    |||||||||||||| |||||||||   ||||| |||||||||||||||||    
T  48015157 ggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 1797417 - 1797546
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||| |||||||||| ||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctcta 1797516  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     |||||||||||| ||||||||||||||||    
T  1797517 cgcacgagccggactagtcgtccatctttg 1797546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 48804640 - 48804792
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| || | |||||||| ||||| ||||||||||  |||||    
T  48804640 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctcta 48804739  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  48804740 cgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 48804792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 4195354 - 4195202
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| ||||||| |||  |||||||||||||  ||||  |||||||||  |||||    
T  4195354 ttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctcta 4195255  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| |||||||||||| |||||| | |||||| | ||||||||| |||||||    
T  4195254 cgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaa 4195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 22993519 - 22993352
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||||||||||||||||||||| |||||||||||  || | ||||||| |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  22993519 ttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctcta 22993420  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     |||||| ||||||||||||  || |||||||| |   ||||||||||||||| |||| || ||||||    
T  22993419 cgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaagccaaaaaaaaaaaa 22993352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 17748535 - 17748377
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||| |||| || |||||||||||| || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  17748535 tttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctct 17748436  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | | ||||||||||||||||||||| ||||| || |  |||||||| ||||||| ||||    
T  17748435 acgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaagccaa 17748377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 34659182 - 34659335
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| ||| ||| |||  || | |||| || |||| ||||||| | |||||||||||||  ||||||||||  ||||    
T  34659182 tttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctct 34659281  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||||||||||||| ||| | ||||||||  | ||||||||||||||    
T  34659282 acgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaa 34659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 13095815 - 13095982
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| ||||||||||||||||  ||||||||||  || | |||| || ||||||||| |||| |||||||| ||||| ||||||||||  |||||    
T  13095815 ttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctcta 13095914  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| |||||||||||||||  || |||||||| |  |||||||||||| ||| |||| || ||||||    
T  13095915 cgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagccaaaaaaaaaaaa 13095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 10048023 - 10047861
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    ||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| |||||||||   ||||| |||     
T  10048023 ctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcat 10047924  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||| | |||||||||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  10047923 gagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 10047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 5039571 - 5039438
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||  || |||| || | |||| ||||||| ||||  |||||||||||| |||||||||||| |||| ||||    
T  5039571 tttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctct 5039472  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| |||||||||||||||  || ||||||||    
T  5039471 acgcatgagccggattagtcgctcacctttggtg 5039438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 23658136 - 23658268
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| | |||||||||  |  | |||||| ||||| |||  |||| |||||||||||||| ||||| ||||  ||||    
T  23658136 tttgggctccagtggcaaggagctccttc-aaggacgtacccagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctct 23658234  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    |  |||||||||||||||||||||||||||||||    
T  23658235 acacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 47341833 - 47341985
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||| | |||||||||||  || | |||| ||||||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  47341833 ttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 47341932  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     |||||||| ||||| ||||| || | |||||| |  ||||| ||||||||||    
T  47341933 cgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaa 47341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 5069968 - 5069810
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||| || | |||||||||  || |||||| || |||| |||  ||||||||||||||||| |  |||| ||||  ||||    
T  5069968 tttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctct 5069869  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | |||| |||||||||||||| ||| |||||||| |  |||||||| ||||||| ||||    
T  5069868 acgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagccaa 5069810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 38578992 - 38578867
Alignment:
Q  165 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 264  Q
    |||||||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| ||    
T  38578992 ccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacct 38578893  T
Q  265 ttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||| |  ||||||||||||||||    
T  38578892 ttggtgggtcggaaaccggtgcgaaa 38578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 43346932 - 43346779
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||| |||||||  | | |||| || |||| ||||||| | |||||||| ||||| | ||||||||  ||||    
T  43346932 tttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctct 43346833  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | | |||||||||||||||||  ||||||||||| |  ||||||| ||||||||    
T  43346832 acgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaa 43346779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 43925469 - 43925586
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  |||||    
T  43925469 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctcta 43925568  T
Q  238 tgcacgagccggattagt 255  Q
     ||| |||| ||||||||    
T  43925569 cgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 16802081 - 16802199
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    |||||||||||||||| |||||||| |||||||||||  || | |||| ||  ||| ||||| ||||||||||||| |||| ||||||| ||  |||||     
T  16802081 tgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctac 16802180  T
Q  239 gcacgagccggattagtcg 257  Q
    |||||||||||||||||||    
T  16802181 gcacgagccggattagtcg 16802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 22973923 - 22974081
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| | |||| |||||||||| |||||||||||  || | |||| || |||| ||||||||| |||||||||||||| ||||| ||||   |||    
T  22973923 tttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtct 22974022  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||||| ||||||||||||| |||||||| |   |||||||| |||||| ||||    
T  22974023 acgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaagccaa 22974081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 9685695 - 9685771
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 213  Q
    ||||||||||||||||||||||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  9685695 tttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 18785627 - 18785777
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    ||||||||||||||||| ||||||| |||||||||||  || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  |||||     
T  18785627 tgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctac 18785726  T
Q  239 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaa 289  Q
    ||| || | ||||||||||| || || ||||| |  |||||||||||||||    
T  18785727 gcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 26423440 - 26423288
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| | ||||| |||||||||||  |  | |||| || |||| |||| |||| | |||||||||||| |||||| | |  ||||    
T  26423440 tttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctct 26423341  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||| |||||||||| || |||||||| |  ||||||||||||||||    
T  26423340 acgcacgagccagattagtcgttcacctttggtg-gtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 305
Target Start/End: Original strand, 21530708 - 21530872
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||||| |||||||||||   | | ||||  | |||  |||| |||| |||||||| |||||||||||| |||  ||||| ||    
T  21530708 ggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgc 21530807  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||| |||| |||  || |||||||| |  |||||||||| ||||| |||| || ||||||    
T  21530808 acgagccgaattaatcgctcacctttggtgggtcggaaaccggttcgaaagccaaaaaaaaaaaa 21530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 39474965 - 39475025
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 266  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  39474965 ggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 39475025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 41945498 - 41945582
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| ||||||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||| |  ||||| ||||||||||    
T  41945498 ggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaa 41945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 43862125 - 43861967
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| || |||||||||||| | |||| |||||||  | | |||| || |||| |||| |||| ||||||||| |||| ||||||||||  ||||    
T  43862125 tttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctct 43862026  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 295  Q
    | ||| |||||||||||||| | || |||||||| ||| | |||||||||||||| ||||    
T  43862025 acgcatgagccggattagtcattcacctttggtg-gatcgaaaaccggtgcgaaagccaa 43861967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 46414631 - 46414742
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||| ||||||||||||||||   |||||||||  |||| |||| | ||||| |||||||||| ||| ||||||||| || |||||||  ||||    
T  46414631 tttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaataccaagttcgattctcaggatgaataacgcttggccaatgcgcatgcctct 46414730  T
Q  237 atgcacgagccg 248  Q
    | ||||||||||    
T  46414731 acgcacgagccg 46414742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 14650273 - 14650431
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||| ||||||||||||||||| |||||||||||  ||   ||||||| |||| |||  |||||||||||| |||||  ||||||  ||  ||||    
T  14650273 tttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctct 14650372  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||||||| |||||||  || |||||||| | || |||||||||||||| ||||    
T  14650373 acgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaagccaa 14650431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 1605897 - 1606055
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||| || |||||||||||| |||||||||||  ||   |||| |  |||| |||  |||| |||||||||||||| |||||| |||  ||||    
T  1605897 tttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctct 1605996  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 295  Q
    | ||  ||||||||||||||| ||| |||||||| ||| |||||||||||||||| ||||    
T  1605997 aggcttgagccggattagtcgcccacctttggtg-gatcggaaaccggtgcgaaagccaa 1606055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 284
Target Start/End: Complemental strand, 28396284 - 28396166
Alignment:
Q  166 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 265  Q
    |||| |||||| || ||||||||| |||| ||||||||| |||||||||||| |   ||||||||  || || ||| ||||||||||||||||| | |||    
T  28396284 caagaacgtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctt 28396185  T
Q  266 tggtgtgatggaaaccggt 284  Q
    ||||| |  ||||||||||    
T  28396184 tggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 28744187 - 28744285
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    ||||||| |||||| |||| |||||| |||||   ||||||||||||||||||||| |||||||| |  |||||| ||||||||| |||| || |||||    
T  28744187 ggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaaaaaaaaaaa 28744285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 365097 - 365214
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||| || |||||||| ||||  |||||| || | |||| || |||| |||| |||||||||||||||||  |||||||||||  |||||    
T  365097 ttgggctctagtggtaaagagctccttccaaaaacgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctcta 365196  T
Q  238 tgcacgagccggattagt 255  Q
     ||| ||||| |||||||    
T  365197 cgcatgagcctgattagt 365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 4973263 - 4973130
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||| || ||||||||| || |||||||| ||| || | ||||||| |||| ||||  | | |||| ||| ||||  || |||||||  ||||    
T  4973263 tttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctct 4973164  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | | ||||||||||||||||||||| ||||||||    
T  4973163 acgtacgagccggattagtcgtccagctttggtg 4973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 8734839 - 8734686
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||  |||||||||||||||||| |||||||| |||    | ||||||  |||| |||    || ||||||| |||||| ||||||||||  |||     
T  8734839 tttgggcgtcagtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatttcttgggggaacaatgcttgggcagtgcgcatgcctca 8734740  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||| ||||||||| ||| |||||||| |  ||||||||||||||||    
T  8734739 acgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 8734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 36619407 - 36619274
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||| ||||||||||| |||||  |||||||||||  | | |||| || |||| |||| |||| |||||||| ||||  ||||| ||||  ||||    
T  36619407 tttggactctagtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctct 36619308  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| ||||||||||||||||||| | ||||||    
T  36619307 acgcatgagccggattagtcgtccaccattggtg 36619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 37514946 - 37514998
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 258  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||    
T  37514946 ggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 39420862 - 39420962
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||||||||| |||||||| |  ||||| ||| ||||||||||||||||| | ||||| || |  |||||||||||| ||| |||| || ||||||    
T  39420862 ggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaagccaaaaaaaaaaaa 39420961  T
Q  306 c 306  Q
    |    
T  39420962 c 39420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 45960155 - 45960036
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||| |||||||| ||||||||||| | |||||||||||| || | |||| ||||||  |||| || | | |||||| ||||||||||||||||  ||||    
T  45960155 tttgagctccagtagcaaggagctctttccaaggacgtat-cggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctct 45960057  T
Q  237 atgcacgagccggattagtcg 257  Q
    | |||  ||||||||||||||    
T  45960056 acgcataagccggattagtcg 45960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 290
Target Start/End: Complemental strand, 21190914 - 21190780
Alignment:
Q  156 gagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 255  Q
    |||||||| |||||||| ||| || | |||| || |||| ||||  ||||||| ||||||||||  |||||||||  ||||| ||||||| | |||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagt 21190815  T
Q  256 cgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    || |||||  ||||| |  | ||||||||||||||    
T  21190814 cgcccatcaatggtgggtcgaaaaccggtgcgaaa 21190780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 42032052 - 42032182
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||| ||||| ||||||| |||||||||||  || | |||| |  |||| |||| || | ||||||||| |||| |||||| ||||  |||    
T  42032052 tttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatct 42032151  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||| |||||| |||||| ||||| |||||    
T  42032152 acgcatgagccgaattagttgtccacctttg 42032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 3353390 - 3353510
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    |||||||||||||||| |   ||||||||||    | ||||||| | || ||||||||| | ||||||  |||| ||||||||||  ||||| |||||||    
T  3353390 cagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattctcagg-gaaacaacatttggccagtgcgcatgcctctacgcacgag 3353488  T
Q  246 ccggattagtcgtccatctttg 267  Q
    |||||||||||||||| |||||    
T  3353489 ccggattagtcgtccacctttg 3353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 19914854 - 19914817
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||||| |||||||||||    
T  19914854 ttgggctccagtggcaaggagctccttccaaggacgta 19914817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 22268182 - 22268089
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||||||||||||| | |||||||||||   | | |||| || |||| |||| |||| ||||||||  |||| ||||||||||    
T  22268182 tttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcat 22268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 27028235 - 27028388
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| |||| |||||||||||||| | ||||| |||||   | |||||| |  |||| |||  |||| |||||||| ||||| ||||||||||  ||||    
T  27028235 tttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctct 27028334  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |  || |||| ||||||||||  || |||||||| |  ||||||||||||||||    
T  27028335 acacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 27875240 - 27875088
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| ||||||| |||| |||||||  | | |||| ||  ||| |||| |||| |||| ||| ||||| |||||| |||  ||||    
T  27875240 tttgggctccagtggcaagtagctccttccaa-gacgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctct 27875142  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||| || |||||||||||| |||| ||| |  | ||||||||||||||    
T  27875141 acgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 29805592 - 29805440
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||| |||||| ||||  ||||||||||| ||   |||| ||||||| ||||  | | ||||||||| ||||||||||||||| |||||    
T  29805592 tttggactccagtggtaaggagatcctttcaaggacgtattcggagaataccgagttcgattcatatg-ggaacaacgtttggtcagtgcgcatgtctct 29805494  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||  |||| ||||| | |||| ||| |  ||||||| ||||||||    
T  29805493 acgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaa 29805440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 4228904 - 4228865
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtat 176  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  4228904 tttgggctccagcggcaaggagctccttccaaggacgtat 4228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 11607088 - 11607139
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcg 189  Q
    |||||||||||||||||||| ||||| |||||||||||| || | |||||||    
T  11607088 ttgggctccagtggcaaggaactccttccaaggacgtattcggggaatatcg 11607139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 48551883 - 48551980
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaa 304  Q
    |||||||| |||| || |||||||  ||||| | | ||||||||||||||||||| ||||| || ||| |||||||||||||||| |||| || |||||    
T  48551883 gaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatg-gatcggaaaccggtgcgaaagccaaaaacaaaaa 48551980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 34127772 - 34127695
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 215  Q
    |||||||||| ||||||||| ||||| |||||||||||  || | |||| || |||| ||||  ||||||||||||||    
T  34127772 ttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgc 34127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 3603394 - 3603466
Alignment:
Q  218 ggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||  ||||| ||||||||||||||| |||| ||  ||||||| |  ||||| ||||||||||    
T  3603394 ggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaa 3603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 22573770 - 22573921
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||| ||||| |||| || |||| ||  |||  | | ||||||| |||| ||| ||||| ||||||||  |||  ||||||||||  || ||    
T  22573770 ttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcagg-ggaacaacatttgaccagtgcgcatgccttta 22573868  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||| ||||||||| ||| || | || ||||||||||||||    
T  22573869 cgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaa 22573921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 24983487 - 24983403
Alignment:
Q  222 agtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtg-atggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||||  ||||| ||| ||||||||||||||||||| | |||||| |  ||||||||| ||||||| |||| || ||||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagccaaaaaaaaaaaa 24983403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 30827318 - 30827370
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 259  Q
    ||||||| ||||| |||| |||||  ||||| |||||||||||||||||||||    
T  30827318 gaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtc 30827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 45447927 - 45448019
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||| || ||||||||||||||||| |||||||||||  || |||||| |  |||| |||  ||||  |||||||||||||  |||||||||    
T  45447927 ttgggttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcat 45448019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 2550822 - 2550974
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||||||||  ||||||||||| || | ||||||| |||| |||| ||||||||||||| ||| | |||||||||| ||||||    
T  2550822 ttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctcta 2550921  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||||||| |||  ||||||| | || ||||||||||||||    
T  2550922 cgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaa 2550974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 42770803 - 42770671
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||| |||||||| |||||||||||| || |||||| || |||| ||||||||| |||||||||||||| ||||||||||  ||||     
T  42770803 ttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctctt 42770704  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||||||||||||||| ||||||| ||||||||    
T  42770703 cgcacgagccggattaatcgtccacctttggtg 42770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 7747228 - 7747395
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| ||||  ||||||||||||| |||| ||||| ||||  |||||    
T  7747228 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctcta 7747327  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| |||||||||||||||| || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  7747328 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 7747395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 8410085 - 8410242
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  ||   ||||||| |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  8410085 ttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 8410184  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||||||||||||||||||| |||  ||||| | |  |||||||||||||||| ||||    
T  8410185 cgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaagccaa 8410242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 41220595 - 41220756
Alignment:
Q  144 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 243  Q
    |||||||||||||||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  244 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||| ||||||||| || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 41220756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 18902682 - 18902530
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| || | |||||||||||||  |||||||| | ||||||    
T  18902682 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctcta 18902583  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||| ||||||||| ||| |||||||| |  ||||||||||||||||    
T  18902582 cgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 18902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 295
Target Start/End: Complemental strand, 20612688 - 20612529
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagga-ggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||||| ||||||  |||| || | |||| || |||| |||||||||| |||||||| ||||| ||||||||||  ||||    
T  20612688 ttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctct 20612589  T
Q  237 atgcacgagcc-ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||| ||||| |||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  20612588 atgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaaaccaa 20612529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 290
Target Start/End: Complemental strand, 25540551 - 25540404
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    ||||||||||||||||||| | ||||||||||||  | | ||||  | |||| ||||  ||| |||||||||||||| ||||||||||  ||||| ||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 25540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 14169762 - 14169609
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| ||||||| || | |||||||||||| || | ||||||| |||| |||||| || |||||||| ||||  |||||||||| |||||    
T  14169762 tttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctct 14169663  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||||||||||||||||| | | |||||| |  ||||||||||||||||    
T  14169662 acgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaa 14169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 10026768 - 10026636
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||| ||||||||||||||| |||||||||||  ||  ||||| || |||| ||||||||| ||||||||| |||| ||||||||||  |||||    
T  10026768 ttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctcta 10026669  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||| ||||||||||||||| ||| ||||||||    
T  10026668 cgcatgagccggattagtcgaccacctttggtg 10026636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 305
Target Start/End: Original strand, 10823029 - 10823181
Alignment:
Q  153 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 252  Q
    ||||||||||| |||||||||||  || | |||| || |||  |||| ||||||||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 10823128  T
Q  253 agtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||| ||| |||| ||| |  |||||||||||||||| |||| || ||||||    
T  10823129 agtcgcccaccttttgtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 10823181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 286
Target Start/End: Original strand, 21286397 - 21286546
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||| |||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||  ||||||||||  ||||    
T  21286397 tttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctct 21286496  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    | |||||||| |||||||||   |||| |||||| | |||||||||||||    
T  21286497 acgcacgagctggattagtcactcatcattggtgggttggaaaccggtgc 21286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 22593093 - 22593244
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||||||||||||||||||||| |||||||||||  || | ||||  |||||| |||| |||| ||||||||| |||| ||||||||||  ||||| |||    
T  22593093 gctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgca 22593191  T
Q  242 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||||||||||||||||||| |||||||| | | | ||||||||||||| ||||    
T  22593192 tgagccggattagtcgtccacctttggtg-ggtcggaaccggtgcgaaagccaa 22593244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 38005355 - 38005523
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||  || | ||||  | |||| |||| || | |||||||||||||| ||||||||||  ||||    
T  38005355 tttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctct 38005454  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |  || ||||||||||||||| ||| |||||||| ||| |||||| ||||||||| |||| || ||||||    
T  38005455 acacatgagccggattagtcgcccacctttggtg-gatcggaaactggtgcgaaagccaaaaaaaaaaaa 38005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 38962716 - 38962849
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||| ||||||||| |  ||||||||||| || | |||| || |||| ||| |||||||||||||||||||| ||||||||||  ||||    
T  38962716 tttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctct 38962815  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| || |||||||||||||||| ||||||||    
T  38962816 acgcatgaaccggattagtcgtccacctttggtg 38962849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 37560126 - 37560256
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||| ||| ||||||| |||||||||||  || | |||| |  |||| ||||||| | ||||||||| |||||||||||||||  ||||    
T  37560126 tttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctct 37560225  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||||||||||||||| ||||||| |||||    
T  37560226 acgcacgagccggattaatcgtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 12864177 - 12864330
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| |||||||||||| |||| ||||||| || | |||| ||  ||| |||  |||| |||||||| ||||||||||||||||  ||||    
T  12864177 tttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctct 12864276  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
      ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  12864277 gcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 12864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 305
Target Start/End: Complemental strand, 2528494 - 2528326
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||||| |||||||||||  || | || | || |||| |||| |||| |||||||||||||||||||| ||||  ||||    
T  2528494 tttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctct 2528395  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |  ||  ||||||||||||||  ||||||| ||| |  |||||| ||||||||| |||| || ||||||    
T  2528394 acacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaagccaaaaaaaaaaaa 2528326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 3644039 - 3643887
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||| ||||||||| | |||||||||||| || | |||| || |||  |||   | |||||||||||||||| ||||||||||  |||||    
T  3644039 ttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctcta 3643940  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| |||| |||||||||||||| |||||||| |  |||||||| |||||||    
T  3643939 cgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaa 3643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 24179524 - 24179689
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||| |||||||| |||||||||||  | |||| || || |||| ||||||||| ||||||||| |||| |||||| |||  ||||    
T  24179524 tttgggctctagtggcaaagagctccttccaaggacgtacccatgaa-taccg-gttcgattctcagg-ggaacaacgtttggccagtgcacatgcctct 24179620  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | ||| |||||||||||||||||||||||||||| | |  |||||||||| ||| |||| || ||||||    
T  24179621 acgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgcaaaagccaaaaaaaaaaaa 24179689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 331455 - 331598
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||| |||||| | |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||   ||||    
T  331455 ttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttcta 331554  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaacc 281  Q
     ||| ||||||||||||||| ||| |||||||| | ||||||||    
T  331555 cgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 285
Target Start/End: Complemental strand, 39201660 - 39201513
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||  ||||||||||||||||| |||||||||||  || | |||| ||| ||| ||||||||| ||||||| | |||| ||||| ||||  |||||    
T  39201660 ttgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctcta 39201561  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtg 285  Q
     ||| |||||||||||||||| || |||||||| |  |||||||||||    
T  39201560 cgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 34722634 - 34722763
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| |||||||||||| |||||||||||       ||||| | |||| |||||||||  |||||||||||||||||||| ||| |||||    
T  34722634 tttgggctccagtgacaaggagctccttccaaggacgtaccaaatgaatatgg-gttcgattctcagggagaacaacgcttggtcagtgcacatgtctct 34722732  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||||||||||||||||||| ||| |||||    
T  34722733 acgcacgagccggattagtcgcccacctttg 34722763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 138 - 303
Target Start/End: Original strand, 44945548 - 44945712
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||||| |||||||||||  ||   ||||  | |||  |||| ||| |||||||||||||||  |||||||||  |||||    
T  44945548 ttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccag-aggaacaacgcttggatagtgcgcatgcctcta 44945646  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaa 303  Q
     ||||||||||||||||||| ||| |||| ||| ||| |||||||||||||||| ||||||| ||||    
T  44945647 cgcacgagccggattagtcgcccacctttagtg-gatcggaaaccggtgcgaaagccaagaaaaaaa 44945712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 13026558 - 13026445
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    ||||||||||||||| ||||| |||||||||||| |  | ||||||| |||| ||| ||||||||||||| | |||| ||||||||||  ||||| |||     
T  13026558 ctccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcat 13026459  T
Q  243 gagccggattagtc 256  Q
    ||||||||||||||    
T  13026458 gagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 34356159 - 34356280
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||  | ||||||||||||  | | |||| || |||| |||  |||| |||||||| ||||||||||||||||  ||||    
T  34356159 tttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctct 34356258  T
Q  237 atgcacgagccggattagtcgt 258  Q
    ||||| ||||||||||| ||||    
T  34356259 atgcatgagccggattaatcgt 34356280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 41032057 - 41031906
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||   | |||  | || |||| |||| |||| |||||||| ||||| ||||| ||||  |||||    
T  41032057 ttgggctccagtggcaaggagctccttccaaggacgtaccagggaac-accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctcta 41031959  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||||||||||||  ||| |||||||| |  ||||||| ||||||||    
T  41031958 cgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaa 41031906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 19976960 - 19976830
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| ||||| | |||||||||||| || | |||| || |||| ||| ||||| |||| |||| ||||||||||||||| |||||    
T  19976960 tttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctct 19976861  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | |||  || || |||||||| ||| |||||    
T  19976860 acgcataagtcgaattagtcgcccacctttg 19976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 28616533 - 28616379
Alignment:
Q  137 tttgggctccagtggcaa-ggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    ||||| |||||||| ||| ||| ||||| |||||||| ||| || | ||||||| |||| ||| ||||| |||| ||| ||||| ||||||||||  |||    
T  28616533 tttggactccagtgacaaaggaactccttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctc 28616434  T
Q  236 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    || ||||||||| ||||||||| |||||||| ||| |   |||||||||||||||    
T  28616433 tacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaa 28616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 16813313 - 16813165
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||| || |||||||||||| |||||||||||  ||   |||| | ||||| | | ||||| ||||||||| |||  |||| |||||  ||||||||    
T  16813313 ggctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcagg-ggaacaacgtttgaccagtacgcatgcctctatgc 16813215  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16813214 acgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 16852592 - 16852444
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||| || |||||||||||| |||||||||||  ||   |||| | ||||| | | ||||| ||||||||| |||  |||| |||||  ||||||||    
T  16852592 ggctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcagg-ggaacaacgtttgaccagtacgcatgcctctatgc 16852494  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16852493 acgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 45263820 - 45263687
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||||||||  |||  |  ||| || | |||| || |||| |||| |||  |||||||||||||| ||||||||||  ||||    
T  45263820 tttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctct 45263721  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||||||||||||||| |||  |||||||||||    
T  45263720 acgcacgagccggattaatcgctcatctttggtg 45263687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 305
Target Start/End: Complemental strand, 3811832 - 3811676
Alignment:
Q  149 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 248  Q
    ||||||||| ||||| |||||||||||  || | ||||||| |||| |||| |||  |||||||| |||||||| |||||||  ||||| ||| ||||||    
T  3811832 tggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccg 3811733  T
Q  249 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||| ||| ||| |||||||| |   ||||||| ||||||| |||| || ||||||    
T  3811732 gattactcgcccacctttggtgggtcagaaaccgatgcgaaagccaaaaaaaaaaaa 3811676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 270
Target Start/End: Original strand, 7787010 - 7787142
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||| |||||  | ||||||||  || | |||| || |||| |||  |||| |||||||  ||||| |||| |||||  |||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctcta 7787109  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||||||||||||||||||| ||||||||||||    
T  7787110 cgcacgagccggattagtcgcccatctttggtg 7787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 35946693 - 35946844
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||| | |||| ||||||||| | | |||||||||| || | |||| ||||||| ||||  ||| |||||||||||||| || || ||||  |||||    
T  35946693 ttgggcttccgtggtaaggagctcattctaaggacgtatccggggaataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctcta 35946791  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||||||||||||||||| | |||||| |  |||||| |||||||||    
T  35946792 cgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaa 35946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 44139438 - 44139590
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||  |||| ||||| ||||||| | ||  | | |||| || |||| |||| |||| |||||||||||||| |||||||| |  |||||    
T  44139438 ttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctcta 44139537  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||||||||||||| ||| |  ||||| |  ||||||||||||||||    
T  44139538 cgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaa 44139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 25549680 - 25549811
Alignment:
Q  136 ttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    |||||||||||||||||||||||||||| ||||| ||||||  | | ||||  | |||| ||||| |||   ||||||  ||||  ||||| |||  |||    
T  25549680 ttttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctc 25549779  T
Q  236 tatgcacgagccggattagtcgtccatctttg 267  Q
    || |||||||||||||||||||||||||||||    
T  25549780 tacgcacgagccggattagtcgtccatctttg 25549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 27725939 - 27726046
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 282  Q
    |||||||||||  ||||||||||||||||| |||||| ||||||||||  ||||| |||| |||||||||||||| ||| |  ||||| |  ||||||||    
T  27725939 aatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccg 27726038  T
Q  283 gtgcgaaa 290  Q
    ||| ||||    
T  27726039 gtgtgaaa 27726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 10669615 - 10669713
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||||||| |||||||||| |||||| ||||||| ||||||| |||| || |||||||| |  |||||||||||| ||| |||| || ||||||    
T  10669615 gaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtgctaaatccaaaaaaaaaaaa 10669713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 31596578 - 31596432
Alignment:
Q  144 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 243  Q
    |||||||||||||||||||| |||| ||||||| |||  ||||||  |||||||| ||||| ||||||| | |||| |||||| ||||  |||| ||| |    
T  31596578 tccagtggcaaggagctccttccaaagacgtatccgtagaatatcaggttctattttcagggggaacaatgtttggccagtgcacatacttctacgcatg 31596479  T
Q  244 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||| | |||| ||||| | ||||| ||   |||||||||||||||||    
T  31596478 agctgaattaatcgtctacctttgatgaattggaaaccggtgcgaaa 31596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 41187804 - 41187922
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    |||||| | |||||||||||||||| |||||||||||| || | |||| ||| ||| ||||| ||||  |||||||||||  ||||||||||  |||||     
T  41187804 tgggcttcggtggcaaggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctac 41187903  T
Q  239 gcacgagccggattagtcg 257  Q
    ||| ||| |||||||||||    
T  41187904 gcatgagacggattagtcg 41187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 6358304 - 6358171
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| ||||| | | |||||||||| || | |||| |   ||| |||  |||| |||||||| ||||| ||||||||||  ||||    
T  6358304 tttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctct 6358205  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||| ||||||||||||||||||| | ||||||    
T  6358204 acgcatgagccggattagtcgtccaccattggtg 6358171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 290
Target Start/End: Original strand, 11069835 - 11069984
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||| |||| |||||||| | |||||||||||  || | |||| |  |||| ||||  ||| ||||||||| |||| ||||||||||| ||||| ||    
T  11069835 ggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgc 11069934  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||| | |||||||||||| | |||||| |  |||||||| |||||||    
T  11069935 acgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaa 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 270
Target Start/End: Complemental strand, 39807038 - 39806905
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||  ||||||  ||||||||||  || | |||| || |||| |||| || ||| ||||||| |||| ||||||||||  ||||    
T  39807038 tttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctct 39806939  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    |  |||||| |||||||||| |||| ||||||||    
T  39806938 acacacgagtcggattagtcatccacctttggtg 39806905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 10046628 - 10046497
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||| ||||||||||||||| ||||| |||||| ||   |||| || |||| ||||||| | | ||||||| || | ||||||||||  |||||    
T  10046628 ttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacg-tttgacagtgcgcatgcctcta 10046530  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||| ||||||||||||||| ||| ||||||||    
T  10046529 cgcatgagccggattagtcgaccacctttggtg 10046497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 21180467 - 21180347
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||  ||   |||| ||  ||| |||| || |  ||||||| ||||| |||||| |||  ||||    
T  21180467 tttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctct 21180368  T
Q  237 atgcacgagccggattagtcg 257  Q
    | |||||||||||||||||||    
T  21180367 acgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 29422168 - 29422298
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||| |||||||||||||  ||||||||||  || | ||||  | |||| |||  |||  |||||||| ||||| || || ||||| || |    
T  29422168 tttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcataccttt 29422267  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||||||||||||||||||||||| |||||    
T  29422268 acgcacgagccggattagtcgtccacctttg 29422298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 12455334 - 12455431
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    |||||||||| | ||||||||||  ||||| |||||||||||||||||||  || | |||||| |  |||||||||||||||| |||| || ||||||    
T  12455334 aacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 12455431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 18649179 - 18649026
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||| |||| || ||||||| | || |  | |||| ||  ||| |||||||||||||||||   |||| ||||||||||  ||||    
T  18649179 tttgggctccagtggcaagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctct 18649080  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||| |||||||||||  ||  ||||||| | ||||||||| |||||||    
T  18649079 acgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaa 18649026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 20116700 - 20116607
Alignment:
Q  202 aggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||||||| ||| || |||||||  ||||| ||| |||||||||||| |||||| ||||| || |  |||||||||||||||| ||||    
T  20116700 aggaggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagccaa 20116607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 10106542 - 10106670
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||| ||||||| |||  ||| ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||    
T  10106542 ttgggctccggtggtaaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 10106641  T
Q  238 tgcacgagccggattagtcgtccatcttt 266  Q
    ||||  || ||||||||||||||| ||||    
T  10106642 tgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 16034899 - 16035043
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    |||||| ||||| ||||| |||||||||||| || | |||| || |||| ||| ||||| |||||||||||||  ||||| ||||  || || | |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  246 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||  || | ||| || |  ||||||||||||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaa 16035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 23500834 - 23500755
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgctt 217  Q
    |||||||||| |||||||||||||||| |||| ||||||| || | ||||||| |||| |||| |||||||||||| ||||    
T  23500834 tttgggctccggtggcaaggagctccttccaaagacgtat-cggggaatatcgggttcgattcccaggaggaacaaagctt 23500755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 290
Target Start/End: Original strand, 2784900 - 2785038
Alignment:
Q  151 gcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccgga 250  Q
    |||| ||||||||  ||||||||||| || | |||| ||||||| ||| ||||| | |||||   |||||||||||||||  ||||| ||| ||| | ||    
T  2784900 gcaatgagctcctttcaaggacgtatccgaggaataccgagttcgattttcagg-gaaacaagatttggtcagtgcgcatgcctctacgcatgagtcaga 2784998  T
Q  251 ttagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||| ||| || |  ||||||||||||||||    
T  2784999 ttagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 16325602 - 16325701
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||| |||||||| ||||| ||||| ||||  ||||| ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 9360830 - 9360748
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||| |||| ||||||||||  ||||| |||||||||| |||||||| ||| |||| ||| |  ||||||||||||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaa 9360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 29653651 - 29653733
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||||| ||||||||||  ||||| |||||||||| |||||||| ||| ||||||||    |||||||||||||||| ||||    
T  29653651 aacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtg----ggaaaccggtgcgaaagccaa 29653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 5035241 - 5035370
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||| |||||| || | ||| |||||| ||  |||||| | |||| |||| ||| |  ||||| |||||  |||||||||| |||||    
T  5035241 tttgggctccagtggcacggagctgcttctaagaacgtatccggaaaatattgggttcgattcccagaaaaaacaatgcttgaccagtgcgcatgtctct 5035340  T
Q  237 atgcacgagccggattagtcgtccatcttt 266  Q
    | |||||| |||||||| || |||| ||||    
T  5035341 acgcacgaaccggattaatcatccaccttt 5035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 14853520 - 14853361
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat--atct 234  Q
    ||||||||||||||||||||| |||||  |||||| |||| || | |||| |   ||| ||| ||||| ||||||||  |||| ||||||| ||   |||    
T  14853520 tttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctct 14853421  T
Q  235 ctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||  || ||| |||||||||||||||||||| ||| ||| |||| |||||||||| ||||    
T  14853420 ctactcatgagtcggattagtcgtccatctttagtg-gatcgaaatcggtgcgaaagccaa 14853361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 33005706 - 33005797
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    |||||||||||||||||||||||| |  | ||||||||  |||| |||| || ||||| ||| |||| |||||||| ||||| ||||||||||    
T  33005706 ttgggctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggttctgttcccagg-ggaacaacacttggccagtgcgcat 33005797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 37805043 - 37804951
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||| |||||||||||| ||||| |||||||||||  || |||||| ||  ||| |||| |||| |||| |||||||||  |||||||||    
T  37805043 ttgggctacagtggcaaggaactcctcccaaggacgtacccgagaaataccggattcgattcacagggggaataacgcttggctagtgcgcat 37804951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 44023361 - 44023401
Alignment:
Q  250 attagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  44023361 attagtcgtccatctttggtgggttggaaaccggtgcgaaa 44023401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 32028366 - 32028433
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagg 204  Q
    ||||||||| |||||||||||||| || ||||||||||||  | |||||||||| ||| ||| |||||    
T  32028366 tttgggctctagtggcaaggagctgcttccaaggacgtatttgggaaatatcgaattcgattttcagg 32028433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 28525537 - 28525479
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 266  Q
    |||||| ||||| ||||||||||  ||||| |||||||||||||||||| |||| ||||    
T  28525537 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 3849013 - 3848937
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 267  Q
    |||| ||| ||||| | ||||||| |||| ||| |||||| |||||| ||||||| |||||||||||| || |||||    
T  3849013 gttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttg 3848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 43303399 - 43303319
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatc 263  Q
    ||||||| |||| ||| ||| | |||||||||||||  |||| |||||  |||||||||||||| |||||| ||| |||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggattaatcgcccatc 43303319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 137 - 305
Target Start/End: Complemental strand, 41664010 - 41663842
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| | |||||||||| || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  ||||    
T  41664010 tttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctct 41663911  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | ||| |||| |||||||||||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  41663910 acgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 41663842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 26325769 - 26325919
Alignment:
Q  140 gggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatg 239  Q
    ||||||||||||||||||||||||  ||||||||||| || | ||||||| |||| |||| |||  |||||||| ||||||||||||||||  ||||| |    
T  26325769 gggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacg 26325868  T
Q  240 cacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    || ||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  26325869 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 26325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 5855476 - 5855629
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||    
T  5855476 tttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctct 5855575  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||| |||||||||||| || |||| ||| |  |||||||| |||||||    
T  5855576 acgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaa 5855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 8763946 - 8764103
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||||||||||||||| |||||||||||  || | ||||||| ||||  ||| |||| |||||||| ||||| ||||||||||  |||||    
T  8763946 ttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctcta 8764045  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||||||||||||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  8764046 cgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagccaa 8764103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 295
Target Start/End: Complemental strand, 43959974 - 43959817
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||| |||||| |||| ||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  |||||    
T  43959974 ttgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctcta 43959875  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 295  Q
     ||||||||||||||||||| ||| |||| ||| ||| |||||||||||||||| ||||    
T  43959874 cgcacgagccggattagtcgcccacctttagtg-gatcggaaaccggtgcgaaagccaa 43959817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 45362038 - 45361883
Alignment:
Q  135 tttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatct 234  Q
    |||||||||| |||||||||||||||||| |||||||||||  |  | |||| || |||| |||||||||||||||||||||||| ||||||||||  |     
T  45362038 tttttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgcca 45361939  T
Q  235 ctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||| |||  ||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  45361938 ctacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 45361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 17642158 - 17642000
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||| |||||||||||| ||| |||||||  |  ||||||  | |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  17642158 tttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 17642059  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||||||||||||||||||||||| |||||||| |  |||||| ||||||||| ||||    
T  17642058 acgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaa 17642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 10422742 - 10422895
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| |||||||||||||||||| |||| ||||||| || | |||| || |||| |||   |||||||||||| ||||| ||||||||||  ||||    
T  10422742 tttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctct 10422841  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||||||||||||||||||| |||||||  |  ||||||||||||||||    
T  10422842 acgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaa 10422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 18915821 - 18915989
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| ||||||||||||||| || |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||| ||||  ||||    
T  18915821 tttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctct 18915920  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    | |||||||||||||||||||  || | |||||| | ||||||||||||||||| |||| || ||||||    
T  18915921 acgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagccaaaaaaaaaaaa 18915989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 49078069 - 49078236
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| | |||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  |||||    
T  49078069 ttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctcta 49078168  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     ||| |||||||||||||||| || | |||||  |  |||||||||||||||| |||| || ||||||    
T  49078169 cgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 49078236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 33418269 - 33418137
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||| ||||||  ||   |||| ||  ||| ||||  ||| || ||||||||||| ||||||||||  ||||    
T  33418269 tttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctct 33418170  T
Q  237 atgcacgagccggattagtcgtccatctttggt 269  Q
    ||||||||||||||||||||||||| |||||||    
T  33418169 atgcacgagccggattagtcgtccacctttggt 33418137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 32825 - 32947
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||| |||||||| |||||||||||   | | ||||||| || | |||| |||||||||||||||||||||||||| |||  ||||    
T  32825 tttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctct 32924  T
Q  237 atgcacgagccggattagtcgtc 259  Q
    | ||| |||||| ||||||||||    
T  32925 acgcatgagccgaattagtcgtc 32947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 50371988 - 50371835
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||||| | ||||| ||||  |  ||||| || |||| ||| |||||| ||||||||||||| |||| |||||   |||    
T  50371988 tttgggctcaagtggcaaggagctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttct 50371889  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    | |||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  50371888 acgcacaagccggattagtcgcccatctttggtg-gatcggaaaccggtgcgaaa 50371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 10336472 - 10336600
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    |||| |||||||||||||||||||| |||| ||||||| ||   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  |||||     
T  10336472 tgggttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctac 10336571  T
Q  239 gcacgagccggattagtcgtccatctttg 267  Q
    ||| ||||||||||| ||||||| |||||    
T  10336572 gcatgagccggattaatcgtccacctttg 10336600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 17092621 - 17092499
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||||||| |||||||  || |||||||| || |||||||||||||| ||| ||||| | ||||||| |||| ||||| | ||  ||||| ||||||||    
T  17092621 agtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagc 17092522  T
Q  247 cggattagtcgtccatctttggt 269  Q
    ||||||||||||||| |||||||    
T  17092521 cggattagtcgtccacctttggt 17092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 286
Target Start/End: Complemental strand, 30927882 - 30927732
Alignment:
Q  136 ttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    |||||| ||||||||||||||||||||| |||||||||||   | ||||||||| |||| |||  |||  |||||||||||||| || || ||||  |||    
T  30927882 ttttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctc 30927783  T
Q  236 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    || ||| |||||||||||||||||||  ||||||| |   |||||||||||    
T  30927782 tacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 9659328 - 9659180
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||| | | |||||||||  || | |||| || |||| |||| |||| ||||||||| |||   |||||||||  || || ||    
T  9659328 ggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccagg-ggaacaacgtttgactagtgcgcatgcctttacgc 9659230  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9659229 atgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaa 9659180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 10173125 - 10172972
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||| |||||| ||||||||||||  | | |||| ||  ||| |||| ||  | ||||||||||||| |||||| |||  ||||    
T  10173125 tttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctct 10173026  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||||||||||| ||| ||| |||||||| |  ||||||||||||||||    
T  10173025 acgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaa 10172972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 33498992 - 33498863
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||| ||||   ||||| |||   |  ||||| || |||| ||||||||||||| |||||||||| ||||||||||  |||||    
T  33498992 ttgggctccagtggcaaggagttccttttaaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctcta 33498893  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     ||| ||||||||||||||||||| |||||    
T  33498892 cgcatgagccggattagtcgtccacctttg 33498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 2981084 - 2980932
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||||| ||| |||||||| || | ||||  | |||| |||| |||  |||||||| ||||| ||||| ||||  |||||    
T  2981084 ttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctcta 2980985  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||| |||||||||||||||| ||| ||| |  ||||| ||||||||||    
T  2980984 cgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaa 2980932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 14254416 - 14254292
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||| |||||||| ||| | |||||||||||| || | |||| ||||||| ||| ||||| |||||||||||||| |||| |||||  || || |||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  243 gagccggattagtcgtccatctttg 267  Q
    ||||||||||||||||||| |||||    
T  14254316 gagccggattagtcgtccacctttg 14254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 37339846 - 37339942
Alignment:
Q  209 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||||| ||||||||||  ||| | ||||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||| || ||||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagccaaaaaaaaaaaa 37339942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 48798221 - 48798105
Alignment:
Q  140 gggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatg 239  Q
    |||||||||||||||||||||||| |||| ||||||| || | ||||||| |||| |||  |||| |||||||||||||   |||||||||  ||||| |    
T  48798221 gggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacg 48798122  T
Q  240 cacgagccggattagtc 256  Q
    || ||||||||||||||    
T  48798121 catgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 2567230 - 2567383
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| || ||||||||||||||| |||||||||||| ||   |||| || |||| ||| || ||   |||||||||||| ||||||||||  ||||    
T  2567230 tttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctct 2567329  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |  |||||| | |||||| ||||||||||||||| |  |||||||||| |||||    
T  2567330 actcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaa 2567383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 5503985 - 5504138
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||| |||||||||||||||||||| || || ||||||  | | ||||||  |||| |||||||||   ||||||||||| | ||||| |||  ||||    
T  5503985 tttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattctcagggaaaacaacgcttgattagtgcacatgcctct 5504084  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| ||||||||||||||||||| ||||| || |  |||||||||| |||||    
T  5504085 acgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaa 5504138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 31576701 - 31576552
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||| | | |||||||||| |   ||||| || |||| ||||||||| | ||||| |||||| || ||||  |  ||||    
T  31576701 tttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctct 31576602  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    | ||| ||||||| ||||||||||||||||| ||||  ||||||||||||    
T  31576601 acgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgc 31576552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 11398041 - 11397890
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||| |||| ||   |||| || |||| ||||  ||| ||||||||| |||| || |||| ||  |||||    
T  11398041 ttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgagg-ggaacaacgtttggccaatgcgtatgcctcta 11397943  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||| ||||||||||||||| |||||||| |  ||||| ||||||||||    
T  11397942 cgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaa 11397890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 32151076 - 32150956
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||| | || | ||||||  |||| |||  |||| ||||||||  |||||||||||||||  || |    
T  32151076 tttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcatgccttt 32150977  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||| |||||| ||||||||    
T  32150976 acgcatgagccgaattagtcg 32150956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 50503505 - 50503362
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    |||||| ||||||||||  ||||||||||| || | ||||||| |||| |||| |||| |||||||| ||||  ||||||||||  ||||| ||||||||    
T  50503505 agtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagc 50503406  T
Q  247 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||| |||| ||| |  ||||| |  |||||||| |||||||    
T  50503405 cggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaa 50503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 33004168 - 33004050
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||   |||||||||| |||||||||||| || | |||||||  ||| |||  |||| | ||||| |||||| ||||||||||  |||||    
T  33004168 ttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctcta 33004069  T
Q  238 tgcacgagccggattagtc 256  Q
     ||||||||||||||||||    
T  33004068 cgcacgagccggattagtc 33004050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 5063986 - 5063866
Alignment:
Q  148 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 247  Q
    |||||||| ||||||| ||||||||||||  | | ||||| |  ||| ||||| ||| || ||||||||||| ||||||| || |||||||||||||||     
T  5063986 gtggcaagaagctccttccaaggacgtatctggggaatattggattcgattcttagg-ggcacaacgcttggccagtgcgtatgtctctatgcacgagct 5063888  T
Q  248 ggattagtcgtccatctttggt 269  Q
    |||||||||| ||| |||||||    
T  5063887 ggattagtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 16956432 - 16956573
Alignment:
Q  149 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 248  Q
    ||||||||||||||| |||||||||||  || | |||| || ||||  |||||||| | ||||||| |||  ||||||||||  ||||| ||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccg 16956531  T
Q  249 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||   || |||||||| |  ||||||| ||||||||    
T  16956532 gattagtcactcacctttggtgggtcggaaaccagtgcgaaa 16956573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 25178725 - 25178609
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    |||||||||| ||| |||||||||| ||||||||||  | |||||| ||||||||||||  | | |||| ||||||||| ||||||||||| |||||       
T  25178725 ggctccagtgacaatgagctcctactaaggacgtatttgggaaataccgagttctattcctaag-ggaataacgcttggccagtgcgcatacctctacag 25178627  T
Q  241 acgagccggattagtcgt 258  Q
    || |||||||||||||||    
T  25178626 acaagccggattagtcgt 25178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 40288630 - 40288498
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||| | |||||||||||| || | |||| || |||| |||  |||| ||||||||| |||| ||||  ||||  |||||    
T  40288630 ttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctcta 40288531  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
      ||||||||||||||||||  |||| ||||||    
T  40288530 cacacgagccggattagtcgctcatccttggtg 40288498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 45726586 - 45726454
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||| |||| || ||||  |||||||||||  || | |||| |  |||| |||||||||||||| |||  |||| ||||||| || ||||||    
T  45726586 ttgggctccagttgcaaagacctccctccaaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctcta 45726487  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
     ||| |||||||||||||||| || ||||||||    
T  45726486 cgcatgagccggattagtcgttcacctttggtg 45726454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 4581758 - 4581683
Alignment:
Q  215 cttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||| ||||||||||  ||||| |||||||||||| |||||||||| |||||||| |  ||||||||||||||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 18649496 - 18649353
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||| || |||||||| ||||||||||||  |   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  ||||| | ||||||    
T  18649496 agtggtaatgagctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagc 18649397  T
Q  247 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||| ||| ||| |||| |||   |||||||||||||||||    
T  18649396 cagattaatcgcccacctttagtggattggaaaccggtgcgaaa 18649353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 6563396 - 6563513
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||||||||||||||||||||| ||||||| |||  ||   || | || |||| ||||  ||| |||||||||||||| |||||| ||| ||||||    
T  6563396 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 6563495  T
Q  238 tgcacgagccggattagt 255  Q
     ||||||||| |||||||    
T  6563496 cgcacgagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 44969673 - 44969776
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 289  Q
    |||| ||||||||||| |||||||||||| ||||| ||||  | ||| ||| ||||||||||||||||||||| |||||| ||| ||||||||||| |||    
T  44969673 gttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtg-gatcggaaaccggtgtgaa 44969770  T
Q  290 acccaa 295  Q
    | ||||    
T  44969771 agccaa 44969776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 10507716 - 10507776
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 261  Q
    |||||||||||||| |||| ||||| ||||| ||||| ||| |||||||||||||||||||    
T  10507716 caggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtcca 10507776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 15238259 - 15238107
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||| ||||||||||||||| |||||||||||     | ||||||| |||| |||| |||| ||| |||||||||| || || ||||  |||||    
T  15238259 ttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctcta 15238160  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||  |  ||||||||  || |||||||| | ||||||||||| |||||    
T  15238159 cgcacgaatcatattagtcgctcacctttggtgggttggaaaccggttcgaaa 15238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 34334439 - 34334356
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||| | |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 34334356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 34697300 - 34697447
Alignment:
Q  148 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 247  Q
    |||||||||||||||| ||||  |||||| || | |||| |  |||| ||||| ||| |||||||| |||||  |||| ||||  ||||| ||| |||||    
T  34697300 gtggcaaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagcc 34697399  T
Q  248 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||||||||| |||  |||| || | ||||||||| ||||||| ||||    
T  34697400 ggattagtcgcccacttttgatgggttggaaaccgatgcgaaagccaa 34697447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 34877944 - 34878059
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||| |||||||||||||| ||| |||||||||||| || | |||| |  |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  34877944 tttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctct 34878043  T
Q  237 atgcacgagccggatt 252  Q
    |  |||||||| ||||    
T  34878044 acacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 16263563 - 16263652
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    ||||||||||||||||||| ||||||||||  ||||| |||  ||||||| ||||||||||  |||| || ||| ||||||||||||||||    
T  16263563 caggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatg-gatcggaaaccggtgcgaaa 16263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 48761197 - 48761262
Alignment:
Q  204 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 269  Q
    ||||||||||| ||||||||||  |||  ||||| |||||||| |||||||||||||| |||||||    
T  48761197 gaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttggt 48761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 51437423 - 51437516
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    |||||||| ||||| ||| ||||||||  ||||||||||| || | ||||||| |||| |||| || | |||||||||||||  ||||||||||    
T  51437423 tttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcat 51437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 9853430 - 9853298
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||| |||  ||  ||||| || |||| ||||  ||| | ||||||| ||   ||||||||||  |||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctcta 9853331  T
Q  238 tgcacgagccggattagtcgtccatctttggtg 270  Q
      ||||| || ||||| ||||||| ||||||||    
T  9853330 cacacgaaccagattaatcgtccacctttggtg 9853298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 26660093 - 26660244
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||| ||| | || | || ||||||| || | |||| || |||| |||  || | ||||||||  ||| ||||| |||||  |||||    
T  26660093 ttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctcta 26660192  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  26660193 cgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaa 26660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 17988743 - 17988688
Alignment:
Q  208 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatc 263  Q
    ||||| |||||| ||||||||||| ||||| ||| || ||||||||||||||||||    
T  17988743 aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcgtccatc 17988688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 21849290 - 21849239
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 257  Q
    ||||||||||||||  |||||||||  ||||| |||||||||||||||||||    
T  21849290 ggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcg 21849239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 13262107 - 13262161
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 261  Q
    |||||||| ||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  13262107 gaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtcca 13262161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 41743228 - 41743266
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtat 176  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  41743228 ttgggctccggtggcaaggagctccttccaaggacgtat 41743266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 8905304 - 8905212
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||| ||| ||||||||||||||||| |||| ||||||| ||   ||||||| || | ||| ||| | |||||||||||||| ||||||||||    
T  8905304 tttggactctagtggcaaggagctccttccaatgacgtatccggagaatatcgggtacgatt-tcaaggggaacaacgcttggccagtgcgcat 8905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 286
Target Start/End: Original strand, 26258666 - 26258798
Alignment:
Q  153 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 252  Q
    ||||||||||| |||| ||||||  || | |||| ||  ||| |||||||||| || ||||||||||||||||| |||  || || ||| ||| ||||||    
T  26258666 aaggagctccttccaaagacgtacccggggaataccggattcgattctcaggaaga-caacgcttggtcagtgcacatgcctttacgcatgagtcggatt 26258764  T
Q  253 agtcgtccatctttggtgtgatggaaaccggtgc 286  Q
    | ||||||| |||| ||| | ||||||| |||||    
T  26258765 aatcgtccacctttagtgggttggaaactggtgc 26258798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 28324688 - 28324615
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 256  Q
    ||||||| |||| |||| | || | |||||| ||||||||||||||||  ||||| ||| ||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 32142999 - 32142847
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| || ||||||||| |||||| | |||||||||||  | || |||| || |||| ||| ||||| |||||||| ||||| ||||||||||  || |    
T  32142999 tttggacttcagtggcaaagagctcattccaaggacgta-ccctggaataccgggttcgattttcagggggaacaacacttggccagtgcgcatgccttt 32142901  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||| |||||| ||||||||  || ||||| || |  |||||||| |||||||    
T  32142900 acgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaaa 32142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 35908791 - 35908836
Alignment:
Q  216 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 261  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  35908791 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtcca 35908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 892451 - 892375
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 213  Q
    |||||||| ||||||||||||||||||  ||||||||||| || | |||| || |||| ||||  ||| ||||||||    
T  892451 tttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgattcctagggggaacaac 892375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 12744677 - 12744557
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| |||||||| ||  || ||||| ||||||||||||  | | ||||||   ||| ||| ||||| |||||||||||||   ||||||||| |||||    
T  12744677 tttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctct 12744578  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||| |||||| ||||||||    
T  12744577 acgcatgagccgaattagtcg 12744557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 12755667 - 12755547
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| |||||||| ||  || ||||| ||||||||||||  | | ||||||   ||| ||| ||||| |||||||||||||   ||||||||| |||||    
T  12755667 tttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctct 12755568  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||| |||||| ||||||||    
T  12755567 acgcatgagccgaattagtcg 12755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 17389727 - 17389850
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| |||||||||||||||||||||  ||| ||||| | || |||||||||  ||| ||| || || ||||||| | |||  ||||||||||  ||| |    
T  17389727 ttggactccagtggcaaggagctcctttcaatgacgtttccgggaaatatcggattcgattttc-gggggaacaatgtttgaccagtgcgcatgcctcca 17389825  T
Q  238 tgcacgagccggattagtcgtccat 262  Q
     ||| |||| |||||||||||||||    
T  17389826 cgcatgagctggattagtcgtccat 17389850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 41000 - 41158
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| ||| |||||||  |  | ||||||| |||| ||||||| | |||||||| ||||||||||| ||||  ||||    
T  41000 tttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctct 41099  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||||||||||||||||||| |||||||||||| |  |||||||||| ||||| ||||    
T  41100 acgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaaagccaa 41158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 42086282 - 42086439
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||  ||||||||||  |||||    
T  42086282 ttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctcta 42086381  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||| ||||||||||||||||||| |||||||| |  |||||||||||||||| ||||    
T  42086382 cgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagccaa 42086439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 305
Target Start/End: Complemental strand, 5732072 - 5731905
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  |||||    
T  5732072 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 5731973  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
     | | ||||| |||||||||| || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  5731972 cgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 5731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 1538385 - 1538543
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| || ||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  1538385 tttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 1538484  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||||||||||| ||||||| | |||||| |  |||||||||||||||| ||||    
T  1538485 acgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagccaa 1538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 19572679 - 19572836
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||| |||| |||||||| ||||| ||||||||||  |||||    
T  19572679 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctcta 19572778  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||| |||||||||||||||| || | |||||| | |||||||| |||||||| ||||    
T  19572779 cgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaagccaa 19572836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 25417339 - 25417217
Alignment:
Q  134 gtttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatc 233  Q
    |||||||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  |    
T  25417339 gtttttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcc 25417240  T
Q  234 tctatgcacgagccggattagtc 256  Q
    |||| | ||||||||||||||||    
T  25417239 tctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 20525793 - 20525945
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||||||||  |||||| |||| || | ||||||| |||| |||| |||| |||||||| ||| | ||||||||||  |||||    
T  20525793 ttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctcta 20525892  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
     ||| ||||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  20525893 cgcatgagccggattagtcgtccaccattggtg-gatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 37263196 - 37263347
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||||||||||||||| |||| | |||||||||  || | ||||||| |||| ||||||||| |||||||||||||| || |||||||  |||||    
T  37263196 ttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctcta 37263294  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
     ||||||||||||||||||||||| ||||  || ||| ||||||||||||||||    
T  37263295 cgcacgagccggattagtcgtccacctttattg-gatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 7866536 - 7866688
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  7866536 ttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctcta 7866635  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     |||||| |||||||||||| ||| |||||||| | | |||||| ||||||||    
T  7866636 cgcacgaaccggattagtcgcccacctttggtgggttagaaaccagtgcgaaa 7866688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 14588761 - 14588617
Alignment:
Q  146 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 245  Q
    ||||||||||||||| ||  |||||||||||  | | ||||||| |||| ||| |||||||||| ||||||||  ||||||||||  ||||| ||| |||    
T  14588761 cagtggcaaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgag 14588662  T
Q  246 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||||||||||||| |||||||| |  | ||||||||||||||    
T  14588661 ccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 35403665 - 35403558
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||||||||||  || |||||| || |||| ||||| ||| |||||||||||||| || ||||||| |||||    
T  35403665 tttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctct 35403566  T
Q  237 atgcacga 244  Q
    | ||||||    
T  35403565 acgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 9812826 - 9812984
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||   |||    
T  9812826 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttct 9812925  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || |||||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  9812926 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 9812984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 41163612 - 41163455
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| ||||| |||||  || | |||| || |||| |||| |||| ||||||||| |||| |||||| ||| |||||    
T  41163612 tttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccagg-ggaacaacgtttggccagtgcacatgtctct 41163514  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| |||| |||||||||||||| |||| ||| |  |||||| ||||||||| ||||    
T  41163513 acgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaagccaa 41163455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 8513474 - 8513626
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||| ||||||||||||||||| |||||||||||  || | |||| || |||| ||||  ||| | ||||| |||||| |||||| |||  |||||    
T  8513474 ttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctcta 8513573  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     ||||||||| ||||||||||||| |||||||| |  ||||||||||||||||    
T  8513574 cgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 8513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 306
Target Start/End: Complemental strand, 4016406 - 4016239
Alignment:
Q  139 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 238  Q
    ||||||||||||||||| ||||| | |||||||||||   | ||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  |||||     
T  4016406 tgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctac 4016307  T
Q  239 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaac 306  Q
     |||||||||||||||| |  || | |||||| |  ||||||| |||||||| |||| || |||||||    
T  4016306 acacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaaagccaaaaaaaaaaaac 4016239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 30349533 - 30349700
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||||||||||||||||||| |||| |||||||||||| || | |||| || |||  |||   ||| ||||||| | |||| ||||||||||  ||||    
T  30349533 tttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctct 30349632  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    ||||| |||| | |||||||||||| ||| |||| |  |||||||||||||||| |||| || |||||    
T  30349633 atgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaagccaaaaaaaaaaa 30349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 12704968 - 12705126
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||    
T  12704968 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 12705067  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || |||||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  12705068 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 12705126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 12766085 - 12766243
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| ||| ||||||||||||||||| |||||||||||  || | |||| || |||| ||||| ||||||||||| |||||| ||||| ||||  ||||    
T  12766085 tttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctct 12766184  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| || || ||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  12766185 acgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 12766243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 20682770 - 20682617
Alignment:
Q  138 ttgggctccagtggcaaggagctcc-taccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||| ||||||||||| | | |||||||||  || | ||||| | |||  |||  |||| |||||||||||||| ||||||||||  ||||    
T  20682770 ttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtgcgcatgcctct 20682671  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | ||||||||||||||| ||| ||| |||| ||| | |||||||||||||||||    
T  20682670 acgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaa 20682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 305
Target Start/End: Complemental strand, 42861371 - 42861203
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    ||||||||||||||||||||||||| | |||||||| ||| || | ||||||| |||| ||| | |||| | |||||| ||||| ||||||||||  |||    
T  42861371 tttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagg-gaaacaacacttggccagtgcgcatgcctc 42861273  T
Q  236 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    || ||| ||||||||||| ||||||| | |||||| |  ||| |||||||||||| |||| || ||||||    
T  42861272 tacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagccaaaaaaaaaaaa 42861203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 7308517 - 7308397
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||| || ||||||||||||||| | ||||||||||||  | | ||||||| |||| |||| |||| |||||||||||||| |||||| |||  ||||    
T  7308517 tttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctct 7308418  T
Q  237 atgcacgagccggattagtcg 257  Q
    | ||| |||||||||||||||    
T  7308417 acgcatgagccggattagtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 9168399 - 9168277
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||||||||||||||| ||||| |||| ||||||| || | |||| ||||  | |||| ||| ||||||||||||||| ||||||||||| ||||| |||    
T  9168399 gctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccag-aggaacaacgcttggccagtgcgcatacctctacgca 9168302  T
Q  242 cgagccggattagtcgtccatcttt 266  Q
     ||||||||||||||||||| ||||    
T  9168301 tgagccggattagtcgtccaccttt 9168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 9805012 - 9805116
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  9805012 gttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaa 9805111  T
Q  291 cccaa 295  Q
     ||||    
T  9805112 gccaa 9805116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 23247504 - 23247374
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||| || |||| ||||||||||| | |||||||||||   | | ||||||| |||| |||| |||||||||||||||||| |||||  ||||  ||||    
T  23247504 tttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctct 23247405  T
Q  237 atgcacgagccggattagtcgtccatctttg 267  Q
    | ||||||||| ||||||||||||| |||||    
T  23247404 acgcacgagccagattagtcgtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 18136433 - 18136271
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||   |||| || |||| |||| |||| |||||||| ||||||||||| ||||  ||||    
T  18136433 tttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctct 18136334  T
Q  237 atgcacgagccgg----attagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |  || |||||||    |||||||||||| | |||||| |  |||||||||||| ||| ||||    
T  18136333 acacatgagccggattaattagtcgtccaccattggtgggtcggaaaccggtgcaaaagccaa 18136271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 23383602 - 23383764
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatg---cgt------gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcg 227  Q
    ||||||||||||||||||||||||||| ||||||||||||    |||      | |||| || |||| |||| |||| |||||||||||||| |||||||    
T  23383602 tttgggctccagtggcaaggagctccttccaaggacgtatcagacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcg 23383701  T
Q  228 catatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  23383702 cttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 23383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 41800977 - 41801061
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 267  Q
    ||||||| |||| ||||||| | |||||||||||||  || ||||||| |||||| |||||||||||||||||||| ||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttg 41801061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 11845944 - 11845801
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||||||||||||||| |||||||||||  || ||||||||| |||| |||   ||| ||||||||| |||| ||||||||||  ||||| | | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  247 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    || |||| ||| ||| ||||| || | |||||||||||| ||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaa 11845801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 12081916 - 12081995
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    |||| ||||||||| |||||||||||||| ||||||||||   |||| |||||||||| |||||||||||| ||||||||    
T  12081916 gttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtg 12081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 13664225 - 13664372
Alignment:
Q  148 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 247  Q
    |||||||||||||||| ||||||||||||    | |||| ||  ||| ||| ||||| |||||||| ||||| ||||||||||  ||||| ||| |||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagcc 13664324  T
Q  248 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
     ||||| |||  || ||||||||||  |||||||||||||||| ||||    
T  13664325 agattaatcgatcacctttggtgtgtcggaaaccggtgcgaaagccaa 13664372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 28857083 - 28857194
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||||||||||||||||| ||||||||| |  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  28857083 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 28857182  T
Q  238 tgcacgagccgg 249  Q
     ||| |||||||    
T  28857183 cgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 30995085 - 30995208
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||||||||||||||| |||||||||||   | | |||| |  |||| |||| |||| |||||||| ||||| ||| ||||||  ||||| ||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagc 30995184  T
Q  247 cggattagtcgtccatctttggtg 270  Q
    |||||||||||  |||||||||||    
T  30995185 cggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 38897861 - 38897704
Alignment:
Q  147 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 246  Q
    ||||||||||||||| |  |||||||||||  | | |||| || |||| |||  |||| |||||||||||||| ||||||||||  ||||| ||||||||    
T  38897861 agtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccagg-ggaacaacgcttggccagtgcgcatgcctctacgcacgagc 38897763  T
Q  247 cggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 305  Q
    ||||||||| | ||| |||||||| ||| ||||||| |||||||| |||| || ||||||    
T  38897762 cggattagttgcccacctttggtg-gatcggaaaccagtgcgaaagccaaaaaaaaaaaa 38897704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 28862784 - 28862886
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||||||||||||||||||||| |||| ||||||| || | ||||||  |||| ||||||||| |||||||||||||| || ||| |||  ||||| |||    
T  28862784 gctccagtggcaaggagctccttccaaagacgtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctctacgca 28862883  T
Q  242 cga 244  Q
    |||    
T  28862884 cga 28862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 1898955 - 1899048
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    |||||||| |||||||||||||||||| ||||||| |||  || | |||| || |||| |||| |||| |||||||||||||| ||||||||||    
T  1898955 tttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 1899048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 5079285 - 5079418
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    |||||| ||| ||||||| |||||||| ||||| |||||| |||| |||| || | |  |||  |||| |||||| |||||||||| |||||||   |||    
T  5079285 tttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttct 5079384  T
Q  237 atgcacgagccggattagtcgtccatctttggtg 270  Q
    | ||||||||||||||||||| ||| ||||||||    
T  5079385 acgcacgagccggattagtcgcccacctttggtg 5079418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 35638171 - 35638062
Alignment:
Q  152 caaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 251  Q
    |||||| ||||| ||| ||||||||  | | ||||| || ||| ||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||    
T  35638171 caaggaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagat 35638072  T
Q  252 tagtcgtcca 261  Q
    ||||||||||    
T  35638071 tagtcgtcca 35638062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 24498937 - 24499094
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctc 235  Q
    ||||||||| ||| ||||||||||||| ||||||||||||  |   ||||||| |||| ||| || || |  || |||||||| |||||||||||  |||    
T  24498937 tttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatttctaagaa--aataacgcttgatcagtgcgcatgcctc 24499034  T
Q  236 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    || | ||||||||||||| | |||||||||||||| | ||||||  ||||||||| ||||    
T  24499035 tacgtacgagccggattaatagtccatctttggtgggttggaaattggtgcgaaagccaa 24499094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 42291588 - 42291505
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    ||||||||||||| |||||| |||  ||||| ||||||||||||||||||||||| ||||| || ||| ||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatg-gatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 18262717 - 18262651
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 257  Q
    |||||||| ||||| |||||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  18262717 gttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcg 18262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 43399145 - 43399235
Alignment:
Q  200 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||| |||| ||||||||| ||||||||||  ||||| |||||||| ||||||||||||||  ||||||  |  ||||||||||||||||    
T  43399145 tcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaa 43399235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 270
Target Start/End: Complemental strand, 14974465 - 14974344
Alignment:
Q  149 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 248  Q
    ||||||||||||| | | |||||||||| ||   ||||||| |||| ||||| | | ||||||||  |||| |||||| |||  ||||| ||| ||||||    
T  14974465 tggcaaggagctcattctaaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccg 14974366  T
Q  249 gattagtcgtccatctttggtg 270  Q
    ||||||||||||| ||||||||    
T  14974365 gattagtcgtccacctttggtg 14974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 290
Target Start/End: Original strand, 40117402 - 40117522
Alignment:
Q  170 gacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 269  Q
    ||||||| || | |||||||| ||| |||  |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |||| || |||||||    
T  40117402 gacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggt 40117501  T
Q  270 gtgat-ggaaaccggtgcgaaa 290  Q
    | ||| | ||||||||||||||    
T  40117502 g-gatcgaaaaccggtgcgaaa 40117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 7336604 - 7336726
Alignment:
Q  167 aaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 265  Q
    |||||||||| || | ||||||| |||| ||| || ||||| ||||||||||  |||||||||||  ||||| ||||||||||||||| ||||| | |||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggag-aacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctt 7336702  T
Q  266 tggtgtgatggaaaccggtgcgaaa 290  Q
    ||||| |||  ||||||||||||||    
T  7336703 tggtg-gataaaaaccggtgcgaaa 7336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 18294568 - 18294504
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    |||||||||||||||||||||||||| |||||  || || |||||||| ||| ||||||||||||    
T  18294568 ggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtg 18294504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 39099868 - 39099764
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 300  Q
    |||| |||||||| ||||| |||||| |||  ||||| ||| ||||||||||||||| ||| |||||||| |  |||||||||||| ||| |||| || |    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagccaaaaaaa 39099769  T
Q  301 aaaaa 305  Q
    |||||    
T  39099768 aaaaa 39099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 3653997 - 3653934
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 270  Q
    ||||||||||||  ||||||||||  ||||| ||||||| ||||||||||||||| ||||||||    
T  3653997 gaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtg 3653934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 20255385 - 20255476
Alignment:
Q  199 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||| ||||||| ||||  ||||||||||  ||||| ||| ||| ||||||||||||||| |||||||| |  |||||| |||||||||    
T  20255385 ctcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaa 20255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 266
Target Start/End: Original strand, 21487587 - 21487697
Alignment:
Q  153 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 252  Q
    ||||||||||| |||| || |||  || | |||||||||||| ||| ||||||||||||||| ||||  |||||||||  ||||   |||||||||||||    
T  21487587 aaggagctccttccaatgatgtactcgaggaatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggatt 21487683  T
Q  253 agtcgtccatcttt 266  Q
    ||||| ||| ||||    
T  21487684 agtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 24463969 - 24463910
Alignment:
Q  207 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 266  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  24463969 gaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 7736871 - 7736925
Alignment:
Q  183 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||    
T  7736871 aatatcgagttcgattctcaggacaaacaacgtttggtcagtgcacatatctcta 7736925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 14728036 - 14728190
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggagga-acaacgcttggtcagtgcgcatatctc 235  Q
    |||||||||||||||||| |||||| | |||||| | | |  | |||||| ||  ||| ||| ||||| ||  ||||||||||||||||||||||  |||    
T  14728036 tttgggctccagtggcaatgagctcattccaaggtcatttttgggaaataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctc 14728135  T
Q  236 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    || ||| ||||||||||||| |  || ||||| || |  ||||||||||||||||    
T  14728136 tacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaa 14728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 6767203 - 6767166
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6767203 ttgggctccagtggcaaggagctccttccaaggacgta 6767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 18327722 - 18327763
Alignment:
Q  135 tttttgggctccagtggcaaggagctcctaccaaggacgtat 176  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  18327722 tttttggactccagtggcaaggagctccttccaaggacgtat 18327763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 24875300 - 24875429
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| || |||||||||||  | |||||||||||  |    ||||||  |||| ||||| |||  |||||||| |||  |||||||||| ||||||    
T  24875300 ttgggctctagcggcaaggagcttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctcta 24875399  T
Q  238 tgcacgagccggattagtcgtccatctttg 267  Q
     ||||||||||||||| ||||||| |||||    
T  24875400 cgcacgagccggattaatcgtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 38297117 - 38297024
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||||||||||||||||||||||| | ||||| |||   | | |||| || |||| |||| || | ||||||||| |||||||||||||||    
T  38297117 tttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattcccaaggggaacaacgtttggtcagtgcgcat 38297024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 14152008 - 14152128
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||||| |||| || |||   | | |||| || |||| |||||||   |||||||||||||| ||||| ||||   ||||| |    
T  14152008 ggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatcc 14152107  T
Q  241 acgagccggattagtcgtcca 261  Q
    | ||||||||||| |||||||    
T  14152108 atgagccggattaatcgtcca 14152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 16755016 - 16755108
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 230  Q
    ||||||| |||||||||||||||| | |||| ||||||| || | ||||  | |||| ||| ||||||| |||||| ||||| ||||||||||    
T  16755016 ttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcat 16755108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 24653935 - 24653832
Alignment:
Q  166 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 265  Q
    ||||||||||| || | ||||| | |||| ||| |||||  ||||||| ||||||||||||||||| ||||| |||  |||||||||| ||||||| | |    
T  24653935 caaggacgtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgca-tagccggattaatcgtccaccat 24653837  T
Q  266 tggtg 270  Q
    |||||    
T  24653836 tggtg 24653832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 173
Target Start/End: Original strand, 28856932 - 28856967
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacg 173  Q
    |||||||||||||||||||||||||| |||||||||    
T  28856932 ttgggctccagtggcaaggagctccttccaaggacg 28856967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 1826811 - 1826937
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggagg-aacaacgcttggtcagtgcgcatatctc 235  Q
    |||||||| |||| |||| |||||||| |||| ||||||  || | ||||||  |||| |||||||||||| |||||||||||| || ||| |||  |||    
T  1826811 tttgggcttcagtagcaatgagctccttccaaagacgtactcggggaatatcaggttcgattctcaggaggaaacaacgcttggccactgcacatgcctc 1826910  T
Q  236 tatgcacgagccggattagtcgtccat 262  Q
    |  ||||||  | ||||||||||||||    
T  1826911 tgagcacgaatcagattagtcgtccat 1826937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 35006819 - 35006769
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 256  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||||||    
T  35006819 ggaacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 40773331 - 40773385
Alignment:
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    ||||| |||||||||||| ||||||||||| |  |||||||||||||||| ||||    
T  40773331 acgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaagccaa 40773385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 36783303 - 36783364
Alignment:
Q  243 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    ||||||||||||||||||| | |||||| | ||||||||||||| ||| |||| || |||||    
T  36783303 gagccggattagtcgtccaccattggtgggttggaaaccggtgcaaaagccaaaaaaaaaaa 36783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 27648472 - 27648425
Alignment:
Q  243 gagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  27648472 gagccggattagtcgtccatctttggtg-gatcggaaaccgatgcgaaa 27648425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 35561970 - 35561914
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttc 194  Q
    |||| |||||||||||| |||||||| |||| ||||||| || | ||||||||||||    
T  35561970 ttggactccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttc 35561914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 304
Target Start/End: Original strand, 319382 - 319545
Alignment:
Q  141 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 240  Q
    ||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||   ||| |||||||||||||| ||||||||||  ||||||||    
T  319382 ggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgc 319481  T
Q  241 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 304  Q
    | |||| |||||||||||||| |||||||| |  |||||||||||||||| |||| || |||||    
T  319482 atgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaagccaaaaaaaaaaa 319545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 527 - 679
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||||||| ||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| |||| |||||| ||||  |||||    
T  527 ttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctcta 626  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     | | ||||| |||||||||  || |||||||| |  ||||||||||||||||    
T  627 cgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 412178 - 412091
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtg 225  Q
    ||||||| ||||||| | |||||||| |||||||||||| || | |||| ||||||| |||| |||| ||||||||||||||||||||    
T  412178 ttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 288
Target Start/End: Original strand, 68473 - 68621
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| ||||||||||||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||    
T  68473 tttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctct 68569  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 288  Q
    | ||||||||||||||||||| ||| |||||||| |  | ||||||||||||    
T  68570 acgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 271226 - 271107
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||  |||||||||||||||| |||||||||||  ||   ||||||| |||| |||| |||| ||||||||||||||||||||||||| ||||||    
T  271226 ttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctcta 271127  T
Q  238 tgcacgagccggattagtcg 257  Q
     ||||||||||| |||||||    
T  271126 cgcacgagccgggttagtcg 271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 250165 - 250128
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgta 175  Q
    |||||||||||||||||||||||| | |||||||||||    
T  250165 ttgggctccagtggcaaggagctcattccaaggacgta 250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 290
Target Start/End: Original strand, 224278 - 224426
Alignment:
Q  142 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 241  Q
    |||| |||||||||||||  || | |||||||||| ||   ||||||| |||| | |||||||  ||| |||| ||| ||||||| |||| ||||| |||    
T  224278 gctctagtggcaaggagcatcttctaaggacgtattcggagaatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgca 224377  T
Q  242 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  224378 cgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaa 224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 186552 - 186626
Alignment:
Q  216 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    ||||||||||| |||  ||||| |||||||||||||||||||| ||||||| ||| |  ||||||||||| ||||    
T  186552 ttggtcagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 270
Target Start/End: Original strand, 9807 - 9934
Alignment:
Q  143 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 242  Q
    |||||||| |||||||||||| ||||||| ||||  | | |||| ||  ||| |||  |||| |||||||||||||| ||||||||||  ||||| ||||    
T  9807 ctccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcac 9906  T
Q  243 gagccggattagtcgtccatctttggtg 270  Q
    ||||||||||||||||||| ||||||||    
T  9907 gagccggattagtcgtccacctttggtg 9934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 16851 - 16988
Alignment:
Q  153 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 252  Q
    ||||||||||| ||||||| | || |  | ||||| | |||| ||||||||| | |||||||||||||||||||| || |||||| ||||||||| ||||    
T  16851 aaggagctccttccaaggatgcattcagggaatattgggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagatt 16950  T
Q  253 agtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||||  || |||||||| | ||||||||| |||||||    
T  16951 agtcgctcacctttggtgggttggaaaccgatgcgaaa 16988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 8863 - 8701
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatg---cgt------gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcg 227  Q
    ||||||||||||||||||||||||||| ||||||||||||    |||      | |||| || |||| |||| |||| |||||||||||||| |||||||    
T  8863 tttgggctccagtggcaaggagctccttccaaggacgtatcagacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcg 8764  T
Q  228 catatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    | |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  8763 cttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 12627 - 12779
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||| ||||||||| ||||||| ||||||||||   || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  12627 ttggactctagtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctcta 12726  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
     |||||| |||||||||||| ||| ||||| || |   |||||||||||||||    
T  12727 cgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaa 12779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 295
Target Start/End: Original strand, 12531 - 12687
Alignment:
Q  137 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 236  Q
    ||||||||| |||||||||||||| || |||||||||||  || |||||| || |||| ||||  ||  |||||||||||||  ||||||||||  ||||    
T  12531 tttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcatgcctct 12628  T
Q  237 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    | ||| ||| ||||||||||| ||| ||||| ||   | ||||||||||||||| ||||    
T  12629 acgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagccaa 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 155805 - 155706
Alignment:
Q  196 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 295  Q
    |||| |||| ||||||||||||||  |||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  |||| ||||||||||| ||||    
T  155805 attcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagccaa 155706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 42984 - 42832
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| |||||||||||| ||||| || ||||| | |||   | | ||||||| |||| ||||  |||  |||||| |||||||||||||||||  |||||    
T  42984 ttggactccagtggcaacgagctacttccaagaatgtacctggggaatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctcta 42885  T
Q  238 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
      || ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  42884 cacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 42832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 6865 - 6964
Alignment:
Q  191 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 290  Q
    |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| |||||||||||||||  || |||||||| |  ||||||||||||||||    
T  6865 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 6964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 18589 - 18706
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    |||| ||||||||||||||||||||| ||||||| |||  ||   || | || |||| ||||  ||| |||||||||||||| |||||| ||| ||||||    
T  18589 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 18688  T
Q  238 tgcacgagccggattagt 255  Q
     ||||||||| |||||||    
T  18689 cgcacgagccagattagt 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 2242 - 2114
Alignment:
Q  138 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 237  Q
    ||||||||| |||| ||||||| |||  ||| ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||    
T  2242 ttgggctccggtggtaaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 2143  T
Q  238 tgcacgagccggattagtcgtccatcttt 266  Q
    ||||  || ||||||||||||||| ||||    
T  2142 tgcataagtcggattagtcgtccaccttt 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 26203 - 26263
Alignment:
Q  201 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 261  Q
    |||| |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||    
T  26203 cagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtcca 26263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 65236 - 65185
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 257  Q
    |||||||||||||| |||||||||| |||||| ||| |||| ||||||||||    
T  65236 ggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcg 65185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 19280 - 19364
Alignment:
Q  206 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 290  Q
    ||||||||||||||  |||||||| | ||||| ||| ||||||||||||||| ||||  || ||| ||| ||||||||||||||||    
T  19280 ggaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtg-gatcggaaaccggtgcgaaa 19364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University