View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11624_low_1 (Length: 526)

Name: NF11624_low_1
Description: NF11624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11624_low_1
NF11624_low_1
[»] chr1 (48 HSPs)
chr1 (14-510)||(52164254-52164749)
chr1 (292-399)||(24134616-24134723)
chr1 (292-403)||(50011503-50011614)
chr1 (306-399)||(25031489-25031582)
chr1 (298-399)||(50065012-50065113)
chr1 (289-399)||(48497205-48497315)
chr1 (291-399)||(7438616-7438724)
chr1 (292-399)||(49619968-49620075)
chr1 (291-399)||(47651867-47651974)
chr1 (292-399)||(34702305-34702412)
chr1 (14-91)||(25184753-25184831)
chr1 (297-399)||(43109230-43109332)
chr1 (291-396)||(12148568-12148673)
chr1 (291-399)||(14262713-14262821)
chr1 (297-395)||(8893861-8893959)
chr1 (292-399)||(4684169-4684276)
chr1 (300-399)||(19424050-19424149)
chr1 (292-399)||(40061439-40061546)
chr1 (297-399)||(2017677-2017778)
chr1 (292-398)||(15417810-15417916)
chr1 (319-399)||(29936673-29936753)
chr1 (292-399)||(12973270-12973377)
chr1 (297-399)||(10123045-10123146)
chr1 (289-399)||(23368724-23368834)
chr1 (297-398)||(3347696-3347797)
chr1 (297-397)||(30735829-30735929)
chr1 (292-399)||(4126895-4127002)
chr1 (292-399)||(27054686-27054799)
chr1 (292-341)||(22386286-22386335)
chr1 (308-396)||(42937224-42937312)
chr1 (292-342)||(39304252-39304302)
chr1 (297-399)||(49239839-49239934)
chr1 (301-399)||(50302843-50302941)
chr1 (300-394)||(25800330-25800424)
chr1 (357-399)||(29332345-29332387)
chr1 (350-396)||(35308463-35308509)
chr1 (292-394)||(35309721-35309822)
chr1 (300-393)||(35527334-35527426)
chr1 (292-336)||(15550882-15550926)
chr1 (301-397)||(47683658-47683752)
chr1 (368-399)||(16985927-16985958)
chr1 (297-399)||(35195603-35195705)
chr1 (357-399)||(42946459-42946501)
chr1 (349-399)||(44583640-44583690)
chr1 (292-397)||(24253637-24253742)
chr1 (292-341)||(25585356-25585405)
chr1 (103-152)||(44508599-44508648)
chr1 (367-399)||(15550940-15550972)
[»] chr6 (32 HSPs)
chr6 (292-399)||(17216954-17217061)
chr6 (292-399)||(6228252-6228359)
chr6 (288-399)||(24794887-24794998)
chr6 (287-399)||(18903359-18903471)
chr6 (292-399)||(20415554-20415661)
chr6 (299-396)||(19748102-19748198)
chr6 (300-399)||(29321968-29322067)
chr6 (292-397)||(4854300-4854405)
chr6 (287-399)||(31637335-31637447)
chr6 (292-403)||(3974438-3974548)
chr6 (292-393)||(18618538-18618638)
chr6 (297-399)||(7954914-7955017)
chr6 (291-396)||(30422103-30422208)
chr6 (297-399)||(3200075-3200177)
chr6 (292-399)||(15717000-15717112)
chr6 (299-399)||(5641682-5641781)
chr6 (367-411)||(5948942-5948987)
chr6 (298-399)||(11552873-11552974)
chr6 (297-341)||(25045741-25045785)
chr6 (300-398)||(1128409-1128510)
chr6 (298-377)||(21874235-21874314)
chr6 (301-399)||(25091091-25091189)
chr6 (359-399)||(11611432-11611472)
chr6 (292-392)||(28536167-28536267)
chr6 (300-399)||(7164699-7164797)
chr6 (365-399)||(1183944-1183978)
chr6 (81-151)||(31665630-31665700)
chr6 (366-399)||(8330483-8330516)
chr6 (335-391)||(19417861-19417918)
chr6 (360-400)||(1194695-1194734)
chr6 (116-152)||(31442515-31442551)
chr6 (349-393)||(32344692-32344736)
[»] chr3 (53 HSPs)
chr3 (290-399)||(39739268-39739377)
chr3 (292-399)||(50381710-50381817)
chr3 (298-399)||(47864638-47864739)
chr3 (292-399)||(11483609-11483716)
chr3 (292-399)||(33528197-33528304)
chr3 (292-399)||(25165436-25165547)
chr3 (292-397)||(29226322-29226427)
chr3 (301-399)||(22602195-22602293)
chr3 (297-399)||(27817060-27817161)
chr3 (303-399)||(31435493-31435589)
chr3 (303-399)||(38668135-38668231)
chr3 (297-397)||(50688841-50688941)
chr3 (292-399)||(2259153-2259259)
chr3 (305-399)||(27471513-27471607)
chr3 (287-397)||(46798573-46798683)
chr3 (316-399)||(44062034-44062116)
chr3 (287-396)||(46247251-46247363)
chr3 (305-397)||(33830362-33830454)
chr3 (292-399)||(32421344-32421451)
chr3 (329-399)||(29645819-29645889)
chr3 (292-399)||(55426110-55426213)
chr3 (303-399)||(1325323-1325420)
chr3 (288-397)||(9320953-9321062)
chr3 (292-397)||(50271726-50271830)
chr3 (299-399)||(985911-986011)
chr3 (292-399)||(30162653-30162764)
chr3 (297-341)||(34225196-34225240)
chr3 (287-343)||(42913443-42913499)
chr3 (300-399)||(1102688-1102787)
chr3 (292-399)||(45431623-45431730)
chr3 (292-399)||(49429457-49429563)
chr3 (297-399)||(166789-166891)
chr3 (292-354)||(8258148-8258210)
chr3 (357-399)||(27394568-27394610)
chr3 (81-150)||(1529165-1529234)
chr3 (298-399)||(7517942-7518043)
chr3 (292-397)||(16141347-16141452)
chr3 (292-341)||(36590386-36590435)
chr3 (335-383)||(4478376-4478424)
chr3 (297-389)||(37133912-37134004)
chr3 (297-396)||(38414885-38414983)
chr3 (357-399)||(8930969-8931011)
chr3 (359-397)||(40412330-40412368)
chr3 (357-399)||(54457214-54457256)
chr3 (292-341)||(1084078-1084127)
chr3 (366-399)||(9738426-9738459)
chr3 (360-397)||(43897666-43897703)
chr3 (120-153)||(52041424-52041457)
chr3 (303-391)||(28054729-28054817)
chr3 (303-391)||(28065154-28065242)
chr3 (361-401)||(31202972-31203011)
chr3 (301-333)||(33780308-33780340)
chr3 (365-397)||(50676861-50676893)
[»] chr4 (51 HSPs)
chr4 (291-399)||(16556446-16556554)
chr4 (292-399)||(51974743-51974850)
chr4 (292-399)||(40406952-40407060)
chr4 (287-394)||(43362165-43362272)
chr4 (292-398)||(46283118-46283224)
chr4 (300-399)||(45847918-45848017)
chr4 (297-399)||(11491211-11491313)
chr4 (289-399)||(36993034-36993144)
chr4 (306-396)||(22096386-22096476)
chr4 (305-399)||(45355710-45355803)
chr4 (305-399)||(45369451-45369544)
chr4 (297-392)||(35909027-35909123)
chr4 (292-399)||(2832063-2832170)
chr4 (292-399)||(38690662-38690769)
chr4 (292-399)||(50815703-50815810)
chr4 (297-399)||(48404129-48404231)
chr4 (298-397)||(8716556-8716652)
chr4 (297-395)||(25104328-25104426)
chr4 (297-399)||(42154567-42154669)
chr4 (297-399)||(43084448-43084550)
chr4 (297-399)||(29430498-29430600)
chr4 (292-378)||(41971313-41971398)
chr4 (289-397)||(22341856-22341964)
chr4 (300-392)||(23448977-23449068)
chr4 (291-399)||(26885392-26885500)
chr4 (292-380)||(27862842-27862930)
chr4 (303-397)||(25234852-25234946)
chr4 (297-399)||(13210151-13210258)
chr4 (303-388)||(41271981-41272066)
chr4 (335-399)||(44251319-44251383)
chr4 (292-399)||(37574269-37574375)
chr4 (365-399)||(2931133-2931167)
chr4 (297-399)||(35733375-35733477)
chr4 (338-395)||(2824634-2824691)
chr4 (309-394)||(24570223-24570308)
chr4 (291-376)||(39387473-39387558)
chr4 (292-397)||(49635428-49635533)
chr4 (335-399)||(21200569-21200632)
chr4 (349-397)||(22525441-22525489)
chr4 (305-341)||(52366216-52366252)
chr4 (300-339)||(8716442-8716481)
chr4 (360-399)||(49607614-49607653)
chr4 (293-399)||(23233941-23234047)
chr4 (365-399)||(56555617-56555651)
chr4 (117-150)||(9199512-9199545)
chr4 (117-150)||(9199750-9199783)
chr4 (358-399)||(20241433-20241474)
chr4 (302-399)||(32037573-32037670)
chr4 (365-394)||(51707188-51707217)
chr4 (300-392)||(9884829-9884921)
chr4 (335-399)||(37889598-37889662)
[»] chr7 (47 HSPs)
chr7 (292-399)||(40273817-40273924)
chr7 (292-399)||(48433702-48433809)
chr7 (297-399)||(31793469-31793571)
chr7 (308-399)||(43440701-43440792)
chr7 (300-403)||(12166086-12166189)
chr7 (309-399)||(4956084-4956174)
chr7 (292-392)||(36528218-36528318)
chr7 (297-397)||(46243292-46243392)
chr7 (292-403)||(3961396-3961507)
chr7 (292-399)||(23824584-23824690)
chr7 (292-394)||(33248799-33248901)
chr7 (297-399)||(42554635-42554737)
chr7 (291-399)||(27454006-27454115)
chr7 (292-399)||(24029981-24030088)
chr7 (302-416)||(34321998-34322113)
chr7 (25-150)||(11072126-11072251)
chr7 (308-397)||(38378231-38378320)
chr7 (288-399)||(48619789-48619899)
chr7 (292-372)||(42338266-42338346)
chr7 (14-140)||(22323617-22323743)
chr7 (14-68)||(22728984-22729038)
chr7 (297-399)||(23602275-23602377)
chr7 (292-341)||(3902323-3902372)
chr7 (297-398)||(28712369-28712469)
chr7 (292-397)||(46266664-46266769)
chr7 (292-399)||(26455997-26456104)
chr7 (292-399)||(14707289-14707395)
chr7 (14-68)||(22323466-22323520)
chr7 (297-397)||(3889794-3889895)
chr7 (288-397)||(24315348-24315456)
chr7 (349-399)||(5228123-5228173)
chr7 (349-399)||(20013634-20013684)
chr7 (300-397)||(37918684-37918781)
chr7 (297-391)||(44986595-44986689)
chr7 (292-397)||(15025152-15025257)
chr7 (357-398)||(20529957-20529998)
chr7 (308-397)||(22156110-22156198)
chr7 (308-397)||(22212025-22212113)
chr7 (310-398)||(35307926-35308015)
chr7 (329-398)||(42841774-42841843)
chr7 (292-396)||(25775608-25775712)
chr7 (367-397)||(18128899-18128929)
chr7 (297-395)||(44662459-44662557)
chr7 (292-341)||(1575690-1575739)
chr7 (287-332)||(10900065-10900110)
chr7 (366-399)||(26606101-26606134)
chr7 (367-399)||(33413903-33413935)
[»] chr5 (32 HSPs)
chr5 (292-399)||(31250143-31250250)
chr5 (292-399)||(38503249-38503356)
chr5 (297-399)||(43227867-43227969)
chr5 (297-399)||(17077362-17077464)
chr5 (290-398)||(42208911-42209018)
chr5 (292-399)||(5039677-5039783)
chr5 (292-398)||(930931-931037)
chr5 (301-399)||(33545379-33545476)
chr5 (292-399)||(4395843-4395950)
chr5 (292-393)||(87787-87888)
chr5 (288-397)||(15106881-15106990)
chr5 (297-395)||(15254151-15254249)
chr5 (297-399)||(15470613-15470715)
chr5 (297-394)||(3294084-3294181)
chr5 (305-397)||(34729481-34729572)
chr5 (307-395)||(41836051-41836139)
chr5 (301-399)||(1572115-1572213)
chr5 (292-399)||(12375399-12375511)
chr5 (292-416)||(43263209-43263326)
chr5 (303-354)||(42643840-42643891)
chr5 (298-399)||(5263171-5263272)
chr5 (297-394)||(9628118-9628215)
chr5 (300-397)||(15680895-15680992)
chr5 (349-391)||(6671785-6671828)
chr5 (297-396)||(20191443-20191541)
chr5 (297-355)||(12256523-12256581)
chr5 (25-74)||(34266275-34266324)
chr5 (17-150)||(36434580-36434707)
chr5 (366-399)||(42902057-42902090)
chr5 (300-336)||(462010-462046)
chr5 (301-341)||(15696212-15696252)
chr5 (335-383)||(42260728-42260776)
[»] chr8 (46 HSPs)
chr8 (301-403)||(5904362-5904464)
chr8 (292-399)||(41454819-41454926)
chr8 (292-399)||(1032566-1032673)
chr8 (289-399)||(38289227-38289337)
chr8 (297-399)||(41845421-41845523)
chr8 (297-399)||(4259860-4259962)
chr8 (295-397)||(38544919-38545020)
chr8 (301-399)||(39104612-39104709)
chr8 (292-397)||(34037942-34038047)
chr8 (290-397)||(31821024-31821132)
chr8 (298-397)||(8349477-8349576)
chr8 (298-397)||(19733063-19733162)
chr8 (288-409)||(45536710-45536831)
chr8 (297-397)||(33820389-33820489)
chr8 (296-396)||(43456648-43456747)
chr8 (297-399)||(22652684-22652786)
chr8 (292-397)||(38063973-38064078)
chr8 (291-399)||(3311435-3311543)
chr8 (305-377)||(16973031-16973103)
chr8 (292-399)||(44828424-44828532)
chr8 (303-398)||(279990-280084)
chr8 (303-398)||(635768-635862)
chr8 (303-398)||(821571-821665)
chr8 (300-399)||(19957313-19957412)
chr8 (292-395)||(36587646-36587749)
chr8 (308-399)||(43413878-43413969)
chr8 (292-399)||(13906613-13906725)
chr8 (297-386)||(36103927-36104016)
chr8 (297-397)||(1360129-1360228)
chr8 (298-397)||(8350438-8350538)
chr8 (292-383)||(30466675-30466766)
chr8 (292-398)||(12831566-12831672)
chr8 (292-341)||(10161960-10162009)
chr8 (310-399)||(10201276-10201365)
chr8 (292-398)||(23139070-23139178)
chr8 (319-403)||(31153507-31153592)
chr8 (365-399)||(11052576-11052610)
chr8 (289-341)||(29114095-29114147)
chr8 (358-397)||(8145835-8145874)
chr8 (81-152)||(42315340-42315411)
chr8 (357-403)||(11690942-11690988)
chr8 (289-355)||(12927799-12927865)
chr8 (81-151)||(45244286-45244356)
chr8 (117-150)||(26083903-26083936)
chr8 (297-333)||(40103523-40103559)
chr8 (366-394)||(41430886-41430914)
[»] scaffold0001 (1 HSPs)
scaffold0001 (292-399)||(419708-419815)
[»] chr2 (33 HSPs)
chr2 (292-399)||(18424144-18424248)
chr2 (299-397)||(3330195-3330293)
chr2 (297-399)||(34107496-34107597)
chr2 (298-399)||(6866510-6866611)
chr2 (289-397)||(42678318-42678426)
chr2 (297-399)||(33065249-33065351)
chr2 (308-397)||(17543084-17543173)
chr2 (292-399)||(41749943-41750049)
chr2 (297-403)||(19843351-19843457)
chr2 (292-397)||(31149096-31149200)
chr2 (286-397)||(25553140-25553250)
chr2 (279-397)||(33482636-33482754)
chr2 (297-341)||(16403526-16403570)
chr2 (297-397)||(20435782-20435882)
chr2 (297-397)||(27463521-27463620)
chr2 (297-399)||(11069341-11069439)
chr2 (314-403)||(33613593-33613682)
chr2 (361-397)||(35710165-35710201)
chr2 (292-399)||(43027151-43027258)
chr2 (300-391)||(1962830-1962921)
chr2 (349-399)||(6270484-6270534)
chr2 (289-399)||(18949677-18949786)
chr2 (297-395)||(24202151-24202249)
chr2 (297-395)||(29090417-29090514)
chr2 (307-399)||(5901823-5901915)
chr2 (297-399)||(17269913-17270015)
chr2 (366-397)||(20375663-20375694)
chr2 (88-151)||(28926074-28926137)
chr2 (297-399)||(25783206-25783307)
chr2 (289-398)||(34235777-34235885)
chr2 (359-397)||(37886219-37886257)
chr2 (287-418)||(43684270-43684402)
chr2 (287-395)||(12183731-12183839)
[»] scaffold0007 (1 HSPs)
scaffold0007 (289-399)||(146766-146875)
[»] scaffold0204 (1 HSPs)
scaffold0204 (297-399)||(10577-10678)
[»] scaffold0018 (1 HSPs)
scaffold0018 (292-342)||(121848-121898)
[»] scaffold0072 (1 HSPs)
scaffold0072 (320-397)||(17727-17804)
[»] scaffold0015 (1 HSPs)
scaffold0015 (361-397)||(63856-63893)
[»] scaffold0339 (1 HSPs)
scaffold0339 (367-399)||(12654-12686)
[»] scaffold0108 (1 HSPs)
scaffold0108 (367-399)||(18338-18370)
[»] scaffold0054 (1 HSPs)
scaffold0054 (360-392)||(22523-22555)


Alignment Details
Target: chr1 (Bit Score: 385; Significance: 0; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 14 - 510
Target Start/End: Complemental strand, 52164749 - 52164254
Alignment:
Q  14 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcgt-ggaatgggagggaaaaaactaggttatgaattggggtt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  52164749 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcgttggaatgggagggaaaaagctaggttatgaattggggtt 52164650  T
Q  113 agggattgcttgaccagacaagctttagaaagaaagatatgcgtatatacatattagtgtannnnnnncggccttgttcgagttacattttgtttagcaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||| ||||||||    
T  52164649 agggattgcttgaccagacaagctttagaaagaaagatatgcgtatatacatattagtgtatttttttcggctttgttcgagttacattttttttagcaa 52164550  T
Q  213 attgtccgagatatatttttggaaggacaaaaatatcttgttctagttttatggactataaaatcaattttcactagttcccacgagcttagctcatttg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||    
T  52164549 attgtccgagatatatttttggaaggacaaaaatatcttgttctagttttatggactataaaatcaaatttcattaattcccacgagcttaactcatttg 52164450  T
Q  313 gtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagctacttgacaaaac 412  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||      
T  52164449 gtaagagataatgcacaatatgtgcagggatcggggttcgaattccggacaccccacttattaatttttaaggtgaatttctctaactacttgacaaa-- 52164352  T
Q  413 aaaaatcactataaagttagagatgaaaaacttatttcatctgnnnnnnnaaagaatcttatttaactcttataatataggattataacgataatttt 510  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52164351 aaaaatcactataaagttagagatgaaaaacttatttcatctgtttttttaaagaatcttatttaactcttataatataggattataacgataatttt 52164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 24134723 - 24134616
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  24134723 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 24134624  T
Q  392 tctctagc 399  Q
    ||||||||    
T  24134623 tctctagc 24134616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 50011503 - 50011614
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||   ||  ||||||  || ||||||||||||||||||||||||||||||||    
T  50011503 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtgaatt 50011602  T
Q  392 tctctagctact 403  Q
    ||||||||||||    
T  50011603 tctctagctact 50011614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 25031582 - 25031489
Alignment:
Q  306 tcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||| |||||||||||||  |||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25031582 tcatttggtaagagataatgcataatatgtgcaggggccggggttcgaattccggacaccccacttattcatctttaaggtgaatttctctagc 25031489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 50065012 - 50065113
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| |||  |||||||  |||||| |||||||||||||||||||||||||||||||||    
T  50065012 agcttagctcatttgataagggataatgcacaatatgtgcagggaccggggttcgaatctcggacaccccacttattcatctttaaggtgaatttctcta 50065111  T
Q  398 gc 399  Q
    ||    
T  50065112 gc 50065113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 48497315 - 48497205
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||  |||| ||||||| |||||||  ||| ||||||||||||||||| |    
T  48497315 gttcccatgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaa 48497216  T
Q  389 atttctctagc 399  Q
    |||||||||||    
T  48497215 atttctctagc 48497205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 7438616 - 7438724
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||| |||| ||||  |||||| |||||||| |||||||||||||||| |||||||||    
T  7438616 tcccatgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaat 7438715  T
Q  391 ttctctagc 399  Q
    |||| ||||    
T  7438716 ttctttagc 7438724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 49619968 - 49620075
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||  |  ||||||| ||||||||||||||||||| |||||||    
T  49619968 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtgaatt 49620067  T
Q  392 tctctagc 399  Q
    ||||||||    
T  49620068 tctctagc 49620075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 47651867 - 47651974
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||   ||  ||||||| |  |||||||||||||||||| ||||||||||||    
T  47651867 tcccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcctagacatcccacttattcat-tttaaggtgaat 47651965  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  47651966 ttctctagc 47651974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 34702412 - 34702305
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| | |||||||||||||||||| ||||||    
T  34702412 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatgaatt 34702313  T
Q  392 tctctagc 399  Q
    ||| ||||    
T  34702312 tctttagc 34702305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 25184831 - 25184753
Alignment:
Q  14 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcg-tggaatgggagggaaaaa 91  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  25184831 atgaaatgaatttattgcgtgttaaagggatgaggaagtcaaatgtgtgaattaattgcgttggaatgggagggaaaaa 25184753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 43109332 - 43109230
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||  |||  ||||||  ||||||| | || |||||||||||||||||||||||||||    
T  43109332 gagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggtgaatttctct 43109233  T
Q  397 agc 399  Q
    |||    
T  43109232 agc 43109230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 12148673 - 12148568
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| |||||||||||||||  |||| ||||||| ||||||||||||||| ||||| ||| ||  || |||| ||||||||||||||||||||||||||    
T  12148673 tcccatgagcttagctcattttataagcgataatgtacaatatgtgcaggggtcggagttcaaaccccagacaccccacttattcatctttaaggtgaat 12148574  T
Q  391 ttctct 396  Q
    ||||||    
T  12148573 ttctct 12148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 14262821 - 14262713
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||| ||| |||||||| |||| ||||||||||||||| ||||||| ||||  ||||||  ||||||| || |||||||||||||||||||||||    
T  14262821 tcccatgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaat 14262722  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  14262721 ttctctagc 14262713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 8893861 - 8893959
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| ||||  ||||||  ||  ||| |||||||||||||||||||||||||||||||    
T  8893861 gagcttagttcatttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctc 8893959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 4684276 - 4684169
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||||||||||| ||||||||||||| ||||||| ||||||| || |||| ||||  |||||| | |||| | |||| ||||||||||||||||||||||    
T  4684276 cccacgagcttacctcatttggtaagggataatgtacaatatatgtaggggtcggggttcgaagttcggataccccatttattcatctttaaggtgaatt 4684177  T
Q  392 tctctagc 399  Q
     |||||||    
T  4684176 actctagc 4684169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 399
Target Start/End: Original strand, 19424050 - 19424149
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||| |||| ||||||||| | ||| ||||||| ||||  ||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  19424050 cttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19424149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 40061439 - 40061546
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| |||| ||||||||||||  ||||   ||  |||||| |||||||| ||||||||||||||||||||||| |||    
T  40061439 cccatgagcttaactcatttggtaagggatagtgcacaatatgtataggggctggggttcgaactccggacaccccacttattcatctttaaggtggatt 40061538  T
Q  392 tctctagc 399  Q
    ||||||||    
T  40061539 tctctagc 40061546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 2017778 - 2017677
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |   ||  ||||||| ||||||| ||||||| ||||| ||||||||||||||||||    
T  2017778 gagcttagctcatttggtaagggataatgcacaatatgtgcataggctggggttcgaatcccggacaccccacttgttcat-tttaaggtgaatttctct 2017680  T
Q  397 agc 399  Q
    |||    
T  2017679 agc 2017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 15417916 - 15417810
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||  |||||||||||||||||| ||||   ||  ||||||   |||||| |||||||||||||||||||| ||||||    
T  15417916 cccatgagcttagctcatttggtaaaggataatgcacaatatgtgtaggggctggggttcgaagctcggacaccccacttattcatctttaagatgaatt 15417817  T
Q  392 tctctag 398  Q
    |||||||    
T  15417816 tctctag 15417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 29936753 - 29936673
Alignment:
Q  319 gataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||| || ||||||||| ||||| |||||| |||||||| |||||||||||||||| || |||||||||||||||    
T  29936753 gataatgcacgatttgtgcaggggtcggagttcgaactccggacaccccacttattcatcttaaaagtgaatttctctagc 29936673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 12973377 - 12973270
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| |||||||  ||   ||| || ||| |||| |||||||||||||||||||||| ||||    
T  12973377 cccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggtaaatt 12973278  T
Q  392 tctctagc 399  Q
    ||| ||||    
T  12973277 tctttagc 12973270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 10123146 - 10123045
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||||||||| ||||||  |||||||||| |||| ||||  ||||||  ||  ||| ||||||||||||||||||||||||||||||||    
T  10123146 gagcttaactcatttggtaagggataatt-acaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctct 10123048  T
Q  397 agc 399  Q
    |||    
T  10123047 agc 10123045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 23368834 - 23368724
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| |||||||||||||||| |||| ||||||||||| | |||||||||| ||   ||||||  ||||||| ||||||||||||  || |||||||    
T  23368834 gttcccatgagcttagctcatttgataagggataatgcacattttgtgcagggaccgatgttcgaaccccggacaccccacttattcacattaaaggtga 23368735  T
Q  389 atttctctagc 399  Q
    |||| ||||||    
T  23368734 atttatctagc 23368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 398
Target Start/End: Complemental strand, 3347797 - 3347696
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| | ||||||||||  ||||||| ||||||||| ||||  ||||  ||||||  ||| ||| ||||||||||||||||||||||||||||||||    
T  3347797 gagcttaacacatttggtaatggataatgtacaatatgttcaggagtcggggttcgaaccccgtacaccccacttattcatctttaaggtgaatttctct 3347698  T
Q  397 ag 398  Q
    ||    
T  3347697 ag 3347696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 30735829 - 30735929
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||  |||| || |||  | ||||| | |||||||||||||  |||||||||||||||    
T  30735829 gagcttaactcatttggtaagggataatgcacaatttgtgcaggggccggagtttgaaccctggacaccacacttattcatctcaaaggtgaatttctct 30735928  T
Q  397 a 397  Q
    |    
T  30735929 a 30735929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 4126895 - 4127002
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| ||||| |  ||   || |||  ||||||| |||| ||||||||||||||||||||||    
T  4126895 cccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtgaatt 4126994  T
Q  392 tctctagc 399  Q
    | ||||||    
T  4126995 tatctagc 4127002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 27054686 - 27054799
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacat------cccacttattcatctttaagg 385  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||||  |||  ||||||  || | |||      | |||||||||||||||||||    
T  27054686 cccatgagcttagctcatttggtaagggataatgcacaatatctgcaggggccggggttcgaacccccggcataggcacctcacttattcatctttaagg 27054785  T
Q  386 tgaatttctctagc 399  Q
    ||||||||||||||    
T  27054786 tgaatttctctagc 27054799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 22386335 - 22386286
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22386335 cccacgagcttagctcatttggtaagggattatgcacaatatgtgcaggg 22386286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 42937312 - 42937224
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||  |||||||||||||||||||||| | ||| |||||| | | |||| |  | |||||||||||||||||||||||||||    
T  42937312 atttggtaaggaataatgcacaatatgtgcaggggttggagttcgaacttcagacaccttatttattcatctttaaggtgaatttctct 42937224  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 39304302 - 39304252
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggga 342  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  39304302 cccatgagcttagctcatttggtaagggataatgcataatatgtgcaggga 39304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 49239934 - 49239839
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||| |||||||||| |||||||  ||||||||| |||| ||| ||        ||||||| |||||||||||||||||||||| |||||||||    
T  49239934 gagcttagcttatttggtaagggataatgagcaatatgtgtaggggtcgaacc-------ccggacaccccacttattcatctttaaggtaaatttctct 49239842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 50302941 - 50302843
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatc-ggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||| ||||||||| ||||||||||| |  | ||  ||||||  || ||||  | ||||||||||||||||||||||||||||||||    
T  50302941 ttagctcatttggtaagggataatgcataatatgtgcagagggctggggttcgaac-cctgacactctacttattcatctttaaggtgaatttctctagc 50302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 25800424 - 25800330
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttct 394  Q
    ||||| ||||| |||||| ||||||||||||| | || ||||  |||  ||| ||  ||||||| |||||||||||||||| |||||||||||||    
T  25800424 cttagttcattcggtaagggataatgcacaatttatgtagggtccggggttccaaccccggacaccccacttattcatcttaaaggtgaatttct 25800330  T

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Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 399
Target Start/End: Original strand, 29332345 - 29332387
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  29332345 ccggacaccccacttattcacctttaaggtgaatttctctagc 29332387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 35308463 - 35308509
Alignment:
Q  350 tcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||    
T  35308463 tcgaattccggacacctcacttatttatctttaaggtgaatttctct 35308509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 35309721 - 35309822
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||| ||   | | ||||||| | |||  |||||  ||| ||| |||||||||||||||||||||||||||    
T  35309721 cccatgagcttagctcatttggtaagggataatacatt-tgtatgcaggggttggaggtcgaaccccgaacaccccacttattcatctttaaggtgaatt 35309819  T
Q  392 tct 394  Q
    |||    
T  35309820 tct 35309822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 35527426 - 35527334
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttc 393  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||| || |||  ||  |||  ||||||||| |||| ||||| |||||||    
T  35527426 cttagctcatttggtaagggataatgcacaatatgtg-aggggtcggagtttgaaccccaaacactccacttatttatctataaggagaatttc 35527334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15550882 - 15550926
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtg 336  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  15550882 cccatgagcttatctcatttggtaagggataatgcacaatatgtg 15550926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 397
Target Start/End: Original strand, 47683658 - 47683752
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||| | |||||||| ||||||||||||||||||||| |  |||| ||||||  ||||| || ||| |||||||| |||||| ||||||||||||    
T  47683658 ttagcttaattggtaagggataatgcacaatatgtgcagaggccggagttcgaa-cccggatat-ccagttattcatgtttaagatgaatttctcta 47683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 399
Target Start/End: Complemental strand, 16985958 - 16985927
Alignment:
Q  368 acttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||||||||||||||||||    
T  16985958 acttattcatctttaaggtgaatttctctagc 16985927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 35195705 - 35195603
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||| ||  |||| ||||||||| | ||| |||||||| | |  ||||||  ||| |||  ||||||||||| ||||||||| |||||||||    
T  35195705 gagcttagctcacttaataagggataatgcatattatatgcagggaccagggttcgaaccccgtacactccacttattcacctttaaggtaaatttctct 35195606  T
Q  397 agc 399  Q
    |||    
T  35195605 agc 35195603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 399
Target Start/End: Complemental strand, 42946501 - 42946459
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  42946501 ccggacaccccacttattcaccttaaaggtgaatttctctagc 42946459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 44583640 - 44583690
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||| ||||||||  |||| |||||| ||||||||||||||||||||||    
T  44583640 ttcgaactccggacactccacctattcacctttaaggtgaatttctctagc 44583690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 24253742 - 24253637
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||| ||| |||| ||||||||| ||| | ||||||| ||||  ||||||   | ||||||  ||||||||  ||||||| ||||||    
T  24253742 cccatgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacctcagacatcttacttattcgcctttaagatgaatt 24253643  T
Q  392 tctcta 397  Q
    ||||||    
T  24253642 tctcta 24253637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 25585405 - 25585356
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||| |||||||| |||||||||||  ||| |||||||||||||||||||    
T  25585405 cccatgagcttagttcatttggtaaaggatgatgcacaatatgtgcaggg 25585356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 44508648 - 44508599
Alignment:
Q  103 aattggggttagggattgcttgaccagacaagctttagaaagaaagatat 152  Q
    |||| |||||||  || |||||| ||||||||||||||||||||||||||    
T  44508648 aattagggttagtaatagcttgatcagacaagctttagaaagaaagatat 44508599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 15550940 - 15550972
Alignment:
Q  367 cacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||||||||| ||||    
T  15550940 cacttattcatctttaaggtgaatttctgtagc 15550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 7e-35; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 17216954 - 17217061
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||| |||| ||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  17216954 cccatgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggtgaatt 17217053  T
Q  392 tctctagc 399  Q
    ||||||||    
T  17217054 tctctagc 17217061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 6228359 - 6228252
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  6228359 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 6228260  T
Q  392 tctctagc 399  Q
    ||||||||    
T  6228259 tctctagc 6228252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 24794998 - 24794887
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||| | ||  ||||||  ||||||||||||||||||||| |||||| ||    
T  24794998 agttcctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttgggattcgaaccccggacatcccacttattcatatttaagatg 24794899  T
Q  388 aatttctctagc 399  Q
    ||||||||||||    
T  24794898 aatttctctagc 24794887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 18903471 - 18903359
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    |||| |||| ||||||||||||||||| ||| |||||| ||||||||||||||||  |||  ||||||  ||||||| ||||||||||||||||||||||    
T  18903471 tagtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 18903372  T
Q  387 gaatttctctagc 399  Q
    |||||||||||||    
T  18903371 gaatttctctagc 18903359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 20415661 - 20415554
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| ||||||||||| ||||| |||||||||||||||||||||||  | |  ||||||  ||||||| |||||||||||||||||||||||||||    
T  20415661 cccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaatt 20415562  T
Q  392 tctctagc 399  Q
    ||||||||    
T  20415561 tctctagc 20415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 299 - 396
Target Start/End: Original strand, 19748102 - 19748198
Alignment:
Q  299 gcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||||   |||||| ||||||||||||| ||||||||||||||||||    
T  19748102 gcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccacggacaccccacttattcat-tttaaggtgaatttctct 19748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 29322067 - 29321968
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||| |||||||||||| |||||||||||||||||||||||   ||  ||||||  || ||||||||||||||| ||||||||||||||||||||||||    
T  29322067 cttagatcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttatttatctttaaggtgaatttctctagc 29321968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 4854405 - 4854300
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||| ||| ||||||| ||||| |||||||||  |||  ||||||  ||||||| |||||||||||||||||||||| ||||    
T  4854405 cccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtaaatt 4854306  T
Q  392 tctcta 397  Q
    ||||||    
T  4854305 tctcta 4854300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 31637335 - 31637447
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||| ||||  |||||    |||||| || ||||||| || ||||||||    
T  31637335 tagttcccacgagcttaactcatttggtatgggataatgcacaatatttgcaggggtcggggttcgagcctcggacaccctacttatttatttttaaggt 31637434  T
Q  387 gaatttctctagc 399  Q
    |||||||||||||    
T  31637435 gaatttctctagc 31637447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 3974438 - 3974548
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||| | | ||||||| ||||||||||||| ||||  |||||| | |||||  |||||||||||||||||||||||||||    
T  3974438 cccatgagcttaactcatttggtatggg-taatgcagaatatgtgcaggggtcggggttcgaacttcggactccccacttattcatctttaaggtgaatt 3974536  T
Q  392 tctctagctact 403  Q
    |||||| |||||    
T  3974537 tctctaactact 3974548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 18618638 - 18618538
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||||||||||| ||||||||||||||||||  | || | ||  ||||||| ||||||| ||||||||||||||||||| |||||||    
T  18618638 cccatgagcttagctcatttggtaaaagataatgcacaatatgtataagggttggggttcgaatcccggacaccccacttattcatctttaa-gtgaatt 18618540  T
Q  392 tc 393  Q
    ||    
T  18618539 tc 18618538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 7955017 - 7954914
Alignment:
Q  297 gagcttagctcattt-ggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||  ||   | ||||  ||| |||||||||||||||||||||||| ||||||||||    
T  7955017 gagcttaactcattttggtaagggataatgcacaatatgtgcagggggcgaggtgcgaaccccgaacatcccacttattcatctttaagatgaatttctc 7954918  T
Q  396 tagc 399  Q
    ||||    
T  7954917 tagc 7954914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 30422208 - 30422103
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||||||| |||| || |  |||||| |||||||| | || ||||| || ||||||||||||    
T  30422208 tcccatgagcttaactcatttggtaagggataatgtacaatatgtgtaggggtccgggttcgaactccggacaccacatttatttatttttaaggtgaat 30422109  T
Q  391 ttctct 396  Q
    ||||||    
T  30422108 ttctct 30422103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 3200177 - 3200075
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| || ||||||||||  ||||||||||||||||  | |||| | | |||||| | |||||| || | |||||||||||||||||||||||||||    
T  3200177 gagcttaacttatttggtaaggaataatgcacaatatgtatatggattgaagttcgaacttcggacagccaatttattcatctttaaggtgaatttctct 3200078  T
Q  397 agc 399  Q
    |||    
T  3200077 agc 3200075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 15717112 - 15717000
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattc------cggacatcccacttattcatctttaagg 385  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  |      |||||| | ||||||||||| |||||||    
T  15717112 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 15717014  T
Q  386 tgaatttctctagc 399  Q
    ||||||||||||||    
T  15717013 tgaatttctctagc 15717000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 399
Target Start/End: Complemental strand, 5641781 - 5641682
Alignment:
Q  299 gcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||| |||| |||||||  ||||||||| ||| | |||||| | |||  |||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  5641781 gcttaactcacttggtaatggataatgcataatttatgcagg-accggggttcgaactccggacaccccacttattcacctttaaggtgaatttctctag 5641683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 5948942 - 5948987
Alignment:
Q  367 cacttattcatctttaaggtgaatttctcta-gctacttgacaaaa 411  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5948942 cacttattcatctttaaggtgaatttctctaggctacttgacaaaa 5948987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 11552873 - 11552974
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||| ||| ||||| | ||||| |||||||||  |||  ||||||  || | || |||||||||||||||||||||| ||||| ||||    
T  11552873 agcttagctcatttggcaagggataacgtacaatgtgtgcaggggccggggttcgaaccccaggcaccccacttattcatctttaaggtaaatttttcta 11552972  T
Q  398 gc 399  Q
    ||    
T  11552973 gc 11552974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 25045741 - 25045785
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  25045741 gagcttagctcatttggtaagggataattcacaatatgtgcaggg 25045785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 1128510 - 1128409
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttat---tcatctttaaggtgaatttctct 396  Q
    |||| |||||||| |||| ||||||||| ||||||||||||| | ||  ||||||  || |||| |||| ||||   |||||||||||||||||||||||    
T  1128510 cttaactcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccccagacaccccatttattcatcatctttaaggtgaatttctct 1128411  T
Q  397 ag 398  Q
    ||    
T  1128410 ag 1128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 21874314 - 21874235
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcat 377  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||   ||| ||||||| ||| ||| | |||||||||||    
T  21874314 agcttaactcatttggtaagggataatgcacaatatgtgcatgggcaggagttcgaatcccgaacacctcacttattcat 21874235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 25091189 - 25091091
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| |||||||| ||  ||||||||||||| ||| |||||| |||  |||| |   |||||| |||||||||||||||| ||||||| ||||||||||    
T  25091189 ttagttcatttggcaaaggataatgcacaatttgttcagggaccggggttcgtacctcggacaccccacttattcatcttaaaggtgattttctctagc 25091091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 11611432 - 11611472
Alignment:
Q  359 ggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  11611432 ggacaccccacttattcatctttaatgtgaatttctctagc 11611472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 392
Target Start/End: Complemental strand, 28536267 - 28536167
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||| ||| || |||  |||||||||||||||  |||  || ||||  ||||||   |||||||||||||||| ||||||||    
T  28536267 cccatgagcttagctcatttggcaagggaaaatatacaatatgtgcaggggccggtgtttgaatctcggacacttcacttattcatctttacggtgaatt 28536168  T
Q  392 t 392  Q
    |    
T  28536167 t 28536167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 399
Target Start/End: Original strand, 7164699 - 7164797
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||| |||| |||||||||   ||| || ||||  |||| ||||||  |||  || |||||||||||| ||||||||||||||||||||||    
T  7164699 cttagctcatttgataagggataatgcatt-tatatgtaggggccggagttcgaaccccgaccaccccacttattcacctttaaggtgaatttctctagc 7164797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 399
Target Start/End: Complemental strand, 1183978 - 1183944
Alignment:
Q  365 cccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||| ||||||||||||||||||||||    
T  1183978 cccacttattcacctttaaggtgaatttctctagc 1183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 31665630 - 31665700
Alignment:
Q  81 ggagggaaaaaactaggttatgaattggggttagggattgcttgaccagacaagctttagaaagaaagata 151  Q
    |||||||||| | ||||||| ||||| ||||||   || ||||||||| ||||||||||| ||||||||||    
T  31665630 ggagggaaaatattaggttaagaattagggttactaatagcttgaccaaacaagctttagtaagaaagata 31665700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 8330516 - 8330483
Alignment:
Q  366 ccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||| ||||||||||||||||||||||    
T  8330516 ccacttattcacctttaaggtgaatttctctagc 8330483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 19417861 - 19417918
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctt-taaggtgaatt 391  Q
    ||||||||||||  ||||||| || |||| |||||||||||||||| |||||||||||    
T  19417861 tgcagggatcgggattcgaatcccagacaccccacttattcatcttataaggtgaatt 19417918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 1194734 - 1194695
Alignment:
Q  360 gacatcccacttattcatctttaaggtgaatttctctagct 400  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  1194734 gacaccccacttattca-ctttaaggtgaatttctctagct 1194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 31442551 - 31442515
Alignment:
Q  116 gattgcttgaccagacaagctttagaaagaaagatat 152  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  31442551 gattgcttgaccaaacaagctttagtaagaaagatat 31442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 32344692 - 32344736
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttc 393  Q
    |||||| |||||||| |||||||||||| |||||| |||||||||    
T  32344692 ttcgaactccggacaccccacttattcacctttaaagtgaatttc 32344736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 39739268 - 39739377
Alignment:
Q  290 ttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaa 389  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||||  ||||||| | |||||||||||||||||||||||    
T  39739268 ttcccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaa 39739367  T
Q  390 tttctctagc 399  Q
    ||||||||||    
T  39739368 tttctctagc 39739377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 50381710 - 50381817
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| ||||||| ||||  ||||||| ||||||| |||||||||||||||||||||||||||    
T  50381710 cccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtgaatt 50381809  T
Q  392 tctctagc 399  Q
    ||||||||    
T  50381810 tctctagc 50381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 47864638 - 47864739
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | ||  ||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  47864638 agcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctcta 47864737  T
Q  398 gc 399  Q
    ||    
T  47864738 gc 47864739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 11483609 - 11483716
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||||  | |  |||||| |||||||| |||||||||||||||||||||||||||    
T  11483609 cccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtgaatt 11483708  T
Q  392 tctctagc 399  Q
    ||||||||    
T  11483709 tctctagc 11483716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 33528304 - 33528197
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||   ||  ||||||  || |||| |||||||||||||||||||||||||||    
T  33528304 cccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatt 33528205  T
Q  392 tctctagc 399  Q
    ||||||||    
T  33528204 tctctagc 33528197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 25165436 - 25165547
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggaca-tcccacttattcatc---tttaaggtg 387  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||  ||||||  |||||||  ||||||||||||||   |||||||||    
T  25165436 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggaccggggttcgaaccccggacacccccacttattcatcttttttaaggtg 25165535  T
Q  388 aatttctctagc 399  Q
    ||||||||||||    
T  25165536 aatttctctagc 25165547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 29226322 - 29226427
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||||  |||  ||||||  ||| ||| |||||||||||||||||||||||||||    
T  29226322 cccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaaggtgaatt 29226421  T
Q  392 tctcta 397  Q
    ||||||    
T  29226422 tctcta 29226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 22602293 - 22602195
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||  ||||||||||||||||| ||||  ||   ||||||| || |||||| |||||||||||||||||||||||||||||||||    
T  22602293 ttagctcatttggtaaggaataatgcacaatatgtgtaggggacgaggttcgaatcccagacatcgcacttattcatctttaaggtgaatttctctagc 22602195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 27817161 - 27817060
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||  |||| ||||||  ||||||| |||| ||||||||||||||| |||||||||||    
T  27817161 gagcttacctcatttggtaagggataatgcacaatttgtgcaggggccggagttcgaa-cccggacaccccatttattcatctttaagttgaatttctct 27817063  T
Q  397 agc 399  Q
    |||    
T  27817062 agc 27817060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 399
Target Start/End: Complemental strand, 31435589 - 31435493
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||  |||||| |||||||||||||||||| |||| | ||  ||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  31435589 agctcatccggtaagggataatgcacaatatgtgtaggggttggggttcgaacctcggacatcccacttattcatctttaaggtgaatttctctagc 31435493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 399
Target Start/End: Original strand, 38668135 - 38668231
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||| |||||||||||||| ||| |||| | ||| ||  ||| || |||| |||||||||||||||||||||||||||||||||||    
T  38668135 agctcatttggtaagggataatgcacaatacgtgtaggggttggagttgaaatccctgacaccccacttattcatctttaaggtgaatttctctagc 38668231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 50688841 - 50688941
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||| ||||||||||  ||| ||||||||| |||| |||||||  ||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  50688841 gagctaagctcatttgccaagggataatgcataatacgtgcaggagtcggggttcgaattccggatatcccacttattcatctttaaagtgaatttctct 50688940  T
Q  397 a 397  Q
    |    
T  50688941 a 50688941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 2259153 - 2259259
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||| ||| ||  || |||| || ||||||||||||||||||| ||||    
T  2259153 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcaaaccccagaca-cctacttattcatctttaaggtaaatt 2259251  T
Q  392 tctctagc 399  Q
    | ||||||    
T  2259252 tatctagc 2259259  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 27471513 - 27471607
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||| ||||||||| ||||||| ||||| | ||  ||||||  ||||||| |||||||||||||||||||||| ||||||||||||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggtaaatttctctagc 27471607  T

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Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 46798573 - 46798683
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    |||| |||| ||||||| |||||||||| || |||||||||||||||||||||||  |||  ||||||  | ||||| ||||||||||||||||||||||    
T  46798573 tagtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctttaaggt 46798672  T
Q  387 gaatttctcta 397  Q
      |||||||||    
T  46798673 agatttctcta 46798683  T

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Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 399
Target Start/End: Complemental strand, 44062116 - 44062034
Alignment:
Q  316 agagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||||||||||||  |||| ||||||  ||| ||| |||||||||||||||||||||||||| ||||||||    
T  44062116 agagataatgcacaatatgtgcaggggccggagttcgaaccccg-acaccccacttattcatctttaaggtgaatgtctctagc 44062034  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 396
Target Start/End: Original strand, 46247251 - 46247363
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatccca---cttattcatctttaa 383  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||   ||  ||||||  || |||| ||||   |||||||||||||||    
T  46247251 tagtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttcttattcatctttaa 46247350  T
Q  384 ggtgaatttctct 396  Q
    |||||||||||||    
T  46247351 ggtgaatttctct 46247363  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 33830454 - 33830362
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||||||||||||||||||||||||||| |||||||     | || ||| ||| |||| ||||||||||||| |||||||||||||||||||    
T  33830454 ctcatttggtaagagataatgcacaatatatgcaggggctctagtttgaactccagacaccccacttattcatttttaaggtgaatttctcta 33830362  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 32421344 - 32421451
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||| ||||||| ||||  ||||||   || ||  |||||||||||||||||||| ||||||    
T  32421344 cccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcatctttaagatgaatt 32421443  T
Q  392 tctctagc 399  Q
    | ||||||    
T  32421444 tttctagc 32421451  T

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Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 29645889 - 29645819
Alignment:
Q  329 aatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  29645889 aatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagc 29645819  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 55426110 - 55426213
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| ||  ||   ||||||  ||||||| |||||    ||||||||||||||||||    
T  55426110 cccatgagcttagctcatttggtaaaggataatgcacaatatgtgcatgggccgaggttcgaaccccggacaccccac----tcatctttaaggtgaatt 55426205  T
Q  392 tctctagc 399  Q
    ||||||||    
T  55426206 tctctagc 55426213  T

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Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 399
Target Start/End: Complemental strand, 1325420 - 1325323
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggaca-tcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| |||||||||| ||||||||||||||| | ||||||||||  ||||||  |||||||  |||| ||||||||||||||| ||||||||| ||||    
T  1325420 agcttatttggtaagggataatgcacaatatatacagggatcgggattcgaaccccggacacccccatttattcatctttaagatgaatttctttagc 1325323  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 9321062 - 9320953
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    |||| ||| ||| |||||||||||| |||| ||||||| ||||| ||||||||| | ||  ||||||  ||| ||| |||||||||||||||| ||| ||    
T  9321062 agtttccatgagtttagctcatttgataagggataatgtacaatttgtgcaggggttggggttcgaaacccgaacaccccacttattcatcttaaagatg 9320963  T
Q  388 aatttctcta 397  Q
    ||||||||||    
T  9320962 aatttctcta 9320953  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 50271726 - 50271830
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||||||||||||||||||||||   | | |||||||  ||   ||||||  ||| |||||||||||||||| ||||||||||||||    
T  50271726 cccatgagcttagctcatttggtaagagataatgcatt-tgtatgcaggggccgtggttcgaaccccgtacatcccacttattcacctttaaggtgaatt 50271824  T
Q  392 tctcta 397  Q
    ||||||    
T  50271825 tctcta 50271830  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 399
Target Start/End: Complemental strand, 986011 - 985911
Alignment:
Q  299 gcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||| || ||||||||||  |||||||||||| |||||||||   ||  |  |||| ||||||| |||||||||||||||| |||||||||||||||||    
T  986011 gcttaacttatttggtaaggcataatgcacaatttgtgcaggggctggggtctgaatcccggacaccccacttattcatcttaaaggtgaatttctctag 985912  T
Q  399 c 399  Q
    |    
T  985911 c 985911  T

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Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 30162653 - 30162764
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattc-----cggacatcccacttattcatctttaaggt 386  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||  |||  ||||||  |     |||||| | ||||||||||| ||||||||    
T  30162653 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaagggccggggttcgaacccgggcacggacacctcacttattcat-tttaaggt 30162751  T
Q  387 gaatttctctagc 399  Q
    |||||||||||||    
T  30162752 gaatttctctagc 30162764  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 34225196 - 34225240
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34225196 gagcttagctcatttggtaagggataatgcacaatatgtgcaggg 34225240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 42913499 - 42913443
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggat 343  Q
    |||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  42913499 tagtccccacgagcttagctcatttgctaagggaaaatgcacaatatgtgcagggat 42913443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 1102787 - 1102688
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||  ||||||| ||||||||| ||| | |||||||  |||| ||||||    ||||| |||||||||||| ||||||||||||||||||||||    
T  1102787 cttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagc 1102688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 45431623 - 45431730
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||| |||||||| ||||||||  | | | ||||||| || |  ||||||  ||||||| |||||||||||| ||||||||||||||    
T  45431623 cccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtgaatt 45431722  T
Q  392 tctctagc 399  Q
    || |||||    
T  45431723 tccctagc 45431730  T

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Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 49429457 - 49429563
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| |||||||||   | | |||||||| | |  ||||||  ||||||| |||||||||||| ||||||||||||||    
T  49429457 cccatgagcttaactcatttggtaagggataatgcatt-tgtatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaatt 49429555  T
Q  392 tctctagc 399  Q
    ||||||||    
T  49429556 tctctagc 49429563  T

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Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 166789 - 166891
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||| |||||||| ||||||||| ||| | |||||||  |||  ||||||  || |||| | |||||||||| |||||| |||||||||| |    
T  166789 gagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaagtgaatttcttt 166888  T
Q  397 agc 399  Q
    |||    
T  166889 agc 166891  T

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Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 8258148 - 8258210
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaa 354  Q
    |||| ||||||| ||||||||||||  | ||||||||||||||||||||| ||||| ||||||    
T  8258148 cccatgagcttaactcatttggtaatggttaatgcacaatatgtgcaggggtcggagttcgaa 8258210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 399
Target Start/End: Original strand, 27394568 - 27394610
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  27394568 ccggacaccccacttattcacctttaaggtgaatttctctagc 27394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 1529234 - 1529165
Alignment:
Q  81 ggagggaaaaaactaggttatgaattggggttagggattgcttgaccagacaagctttagaaagaaagat 150  Q
    |||||||||||| ||||||| ||||| ||||||   || ||||||||| ||||||||||| |||||||||    
T  1529234 ggagggaaaaaattaggttaagaattagggttactaatagcttgaccaaacaagctttagtaagaaagat 1529165  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 7517942 - 7518043
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||| |||| |||||||| ||||||||   ||   ||||||  ||| ||| ||||||||| |||||| || ||||||| |||||    
T  7517942 agcttagctcatttggtaagggatattgcacaatttgtgcaggagccgcggttcgaaccccgaacaccccacttatccatcttaaaagtgaattcctcta 7518041  T
Q  398 gc 399  Q
    ||    
T  7518042 gc 7518043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 16141452 - 16141347
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||| ||| ||||||| |||| ||||||||||||||||| || ||   ||  |||||| ||| |||| |||||||||||||||| ||||| ||||    
T  16141452 cccatgagcatagttcatttgataagggataatgcacaatatgtacaagggctggggttcgaactccagacaccccacttattcatcttaaaggtaaatt 16141353  T
Q  392 tctcta 397  Q
    | ||||    
T  16141352 tatcta 16141347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 36590386 - 36590435
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||| ||| ||||||||||||||||| ||||||| |||||||||||||||    
T  36590386 cccatgagattagctcatttggtaagggataatgtacaatatgtgcaggg 36590435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 4478424 - 4478376
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctttaa 383  Q
    ||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  4478424 tgcaggggtcggggttcgaatcccggacatcccacttattcatctttaa 4478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 37134004 - 37133912
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaa 389  Q
    |||||||||||| |||||||  |||||||||   ||| | ||||  || || ||| || |||||||| |||||||||||||||||||||||||    
T  37134004 gagcttagctcacttggtaaaggataatgcatgttatatacaggagtcagagttcaaactccggacaccccacttattcatctttaaggtgaa 37133912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 38414885 - 38414983
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||| || |||||||| ||||||||| | ||| ||||||| || |  || ||| || | ||| |||||||||||| |||||||||||||||||||    
T  38414885 gagcttagc-cacttggtaagggataatgcatattatatgcaggggtcagggtttgaactctgaacaccccacttattcacctttaaggtgaatttctct 38414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 399
Target Start/End: Complemental strand, 8931011 - 8930969
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  8931011 ccggacaccccacttattcacctttaaagtgaatttctctagc 8930969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 40412330 - 40412368
Alignment:
Q  359 ggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  40412330 ggacatcccacttattcacctttaaagtgaatttctcta 40412368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 399
Target Start/End: Original strand, 54457214 - 54457256
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||    
T  54457214 ccggacaccccatttattcacctttaaggtgaatttctctagc 54457256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 1084127 - 1084078
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||| |||||||||||||||| |||  ||||||| |||||||||||||||    
T  1084127 cccatgagcttagctcatttgttaaaggataatgtacaatatgtgcaggg 1084078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 399
Target Start/End: Original strand, 9738426 - 9738459
Alignment:
Q  366 ccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||||||||||||||| ||||    
T  9738426 ccacttattcatctttaaggtgaatttctttagc 9738459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 43897666 - 43897703
Alignment:
Q  360 gacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  43897666 gacaccccacttattcacctttaaggtgaatttctcta 43897703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 52041424 - 52041457
Alignment:
Q  120 gcttgaccagacaagctttagaaagaaagatatg 153  Q
    ||||||||||||||||||||| ||||||||||||    
T  52041424 gcttgaccagacaagctttagtaagaaagatatg 52041457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 391
Target Start/End: Complemental strand, 28054817 - 28054729
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||||| |||||||| |||| |||| ||| | ||||||| || || ||||||  || |||| |||||||||| ||| ||||||||||||    
T  28054817 agctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatttatccttaaggtgaatt 28054729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 391
Target Start/End: Complemental strand, 28065242 - 28065154
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||||| |||||||| |||| |||| ||| | ||||||| || || ||||||  || |||| |||||||||| ||| ||||||||||||    
T  28065242 agctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatttatccttaaggtgaatt 28065154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 31202972 - 31203011
Alignment:
Q  361 acatcccacttattcatctttaaggtgaatttctctagcta 401  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  31202972 acatcccacttattca-ctttaaggtgaatttctttagcta 31203011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 333
Target Start/End: Original strand, 33780308 - 33780340
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatat 333  Q
    ||||||||||||||||| |||||||||||||||    
T  33780308 ttagctcatttggtaagggataatgcacaatat 33780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 397
Target Start/End: Complemental strand, 50676893 - 50676861
Alignment:
Q  365 cccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||| ||||||||||||||||||||    
T  50676893 cccacttattcacctttaaggtgaatttctcta 50676861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 16556446 - 16556554
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||  ||| ||| ||||||||||||||||||||||||||    
T  16556446 tcccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaat 16556545  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  16556546 ttctctagc 16556554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 51974743 - 51974850
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||   ||||||||||||||||| ||||||||||||||||    
T  51974743 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaacctcggacatcccacttatttatctttaaggtgaatt 51974842  T
Q  392 tctctagc 399  Q
    | ||||||    
T  51974843 tatctagc 51974850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 40407060 - 40406952
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatc-ggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  | ||  ||||||  ||||||| ||||||||||||||||||||||||||    
T  40407060 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtgaat 40406961  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  40406960 ttctctagc 40406952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 43362272 - 43362165
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||| | ||||| ||||  ||||||  ||||||| ||||||||||||||||||||||    
T  43362272 tagttcccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggt 43362173  T
Q  387 gaatttct 394  Q
    ||||||||    
T  43362172 gaatttct 43362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 46283118 - 46283224
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||| |  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  46283118 cccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 46283217  T
Q  392 tctctag 398  Q
    |||||||    
T  46283218 tctctag 46283224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 45848017 - 45847918
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| |||||||| |||| ||||||||| ||||||||||||||||||  ||||||  ||||||| |||||||||||||||||||||||||||||| ||||    
T  45848017 cttatctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctttagc 45847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 11491313 - 11491211
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||  ||| ||||||||| ||| |||||||||  |||| ||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  11491313 gagcttagctcatttgacaagggataatgcataatttgtgcaggggccggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctct 11491214  T
Q  397 agc 399  Q
    |||    
T  11491213 agc 11491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 36993034 - 36993144
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| |||| | ||  || |||  ||||||| |||| |||||||||||||||||||    
T  36993034 gttcccatgagcttagctcatttgataagggataatgcacaatatgtgaaggggttggggtttgaaccccggacaccccaattattcatctttaaggtga 36993133  T
Q  389 atttctctagc 399  Q
    |||||||||||    
T  36993134 atttctctagc 36993144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 396
Target Start/End: Complemental strand, 22096476 - 22096386
Alignment:
Q  306 tcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||| |||||||||||||||||||||||  ||   |||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  22096476 tcatttggtaagggataatgcacaatatgtgcaggggccgaggttcgaactccggacaccccacttattcatttttaaggtgaatttctct 22096386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 45355803 - 45355710
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  45355803 ctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggtgaatttctctagc 45355710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 45369544 - 45369451
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  45369544 ctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggtgaatttctctagc 45369451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 35909123 - 35909027
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcgga-cttcgaattccggacatcccacttattcatctttaaggtgaattt 392  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||  ||||||| || |||| |||||||||| |||||||||||||||||    
T  35909123 gagcttagctcattttgtaagggataatgcacaatatatgcaggggtcggaggttcgaatcccagacaccccacttatttatctttaaggtgaattt 35909027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 2832170 - 2832063
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||| ||||||| | | ||||||||||||||||||| ||||  ||||||  ||  ||| |||||||||||||||||||||||||||    
T  2832170 cccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatt 2832071  T
Q  392 tctctagc 399  Q
     |||||||    
T  2832070 cctctagc 2832063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 38690662 - 38690769
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||| |||||||| ||||||||| | ||| ||||||| ||||  ||||||  ||||||| |||||||||||  ||||||||||||||    
T  38690662 cccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaatt 38690761  T
Q  392 tctctagc 399  Q
    ||||||||    
T  38690762 tctctagc 38690769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 50815703 - 50815810
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||||||| |||  ||||||||||||| |||||||||  |||  ||||||  ||||||| ||||| |||||||||| ||||||||||    
T  50815703 cccatgagcttagctcatttgataaaggataatgcacaatttgtgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggtgaatt 50815802  T
Q  392 tctctagc 399  Q
    ||||||||    
T  50815803 tctctagc 50815810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 48404231 - 48404129
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||| |||||||||||| | |||||||| |||  ||||  ||||||  ||||||| | |||||||||||||||||||||||||||| |    
T  48404231 gagcttagctcatttgataagagataatgtataatatgtgtaggtgtcggggttcgaaccccggacacctcacttattcatctttaaggtgaatttcttt 48404132  T
Q  397 agc 399  Q
    |||    
T  48404131 agc 48404129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 298 - 397
Target Start/End: Original strand, 8716556 - 8716652
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||| ||||||||||||| |||||||||||||||||||||||  ||   |||||| ||||||||| |||||||||||||  |||||||||||||||||    
T  8716556 agcttatctcatttggtaagggataatgcacaatatgtgcaggg-ccgaggttcgaactccggacattccacttattcatc--taaggtgaatttctcta 8716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 25104328 - 25104426
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||||||||| ||| |  |||||||||||||||||||||||| | |  |||||||||| || | | || ||||||||||||||||||||||||||    
T  25104328 gagcttagctcattcggtgaaggataatgcacaatatgtgcagggaccaggattcgaattccagatacctcatttattcatctttaaggtgaatttctc 25104426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 42154567 - 42154669
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| || |||||||||| |||||| |||||||||||||| | ||||  ||||||  |||||||   |||||| |||||||||||||||||||||||    
T  42154567 gagcttaacttatttggtaagggataattcacaatatgtgcagaggtcggggttcgaaccccggacacttcacttaatcatctttaaggtgaatttctct 42154666  T
Q  397 agc 399  Q
    |||    
T  42154667 agc 42154669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 43084448 - 43084550
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| |||||||||||||  |||||||||||||| |  |||| ||||  ||||||| | ||  | ||||||||||||||||||||||||||||||||    
T  43084448 gagcttaactcatttggtaaggaataatgcacaatatatataggggtcggggttcgaatcctggttaccccacttattcatctttaaggtgaatttctct 43084547  T
Q  397 agc 399  Q
    |||    
T  43084548 agc 43084550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 29430498 - 29430600
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||| | |||||||| || |||||| | ||| ||||| ||||||  ||||||  ||||||| || ||||||||||||||||||||||||| |||    
T  29430498 gagcttagcttacttggtaagggacaatgcatattatatgcagtgatcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttatct 29430597  T
Q  397 agc 399  Q
    |||    
T  29430598 agc 29430600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 41971398 - 41971313
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatc 378  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||| || ||   ||||||| ||||||| ||||||||||||||    
T  41971398 cccatgagcttagctcatttggtaagtgataatgcacaatttgtgcagcgaccgagattcgaatcccggaca-cccacttattcatc 41971313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 22341964 - 22341856
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| || ||||  ||||||||||| ||||||||||||||||||| |||| | ||  ||| ||| ||  ||| ||||||| |||||||| |||||||    
T  22341964 gttcccatgaacttaaatcatttggtaaaagataatgcacaatatgtgtaggggttggggttcaaatcccaaacaccccacttgttcatcttaaaggtga 22341865  T
Q  389 atttctcta 397  Q
    |||||||||    
T  22341864 atttctcta 22341856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 23448977 - 23449068
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaattt 392  Q
    ||||||| |||||||||| ||||||||||||||||||||||| | ||  ||||||  ||| ||| ||||||||||||| ||||||||| ||||    
T  23448977 cttagcttatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccgaacaccccacttattcat-tttaaggtggattt 23449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 26885500 - 26885392
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||||||||||||| | | ||||||||||| ||| ||| |||  |||  ||||||  |||||||  ||||||||| |||||||||||| ||    
T  26885500 tcccatgagcttagctcatttggcaggggataatgcacattatatgctggggccggggttcgaaccccggacactccacttatttatctttaaggtggat 26885401  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  26885400 ttctctagc 26885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 27862930 - 27862842
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctt 380  Q
    |||| |||||||||||||||| |||| ||||||||||||| |||||||||   ||  ||||||  ||||||| ||||||||||||||||    
T  27862930 cccatgagcttagctcatttgataagggataatgcacaatttgtgcaggggctggggttcgaaccccggacaccccacttattcatctt 27862842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 397
Target Start/End: Complemental strand, 25234946 - 25234852
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||| |||| |||||||||||||| ||| |||| | |   ||||||  || |||| |||| ||||||||||||||||||||||||||||    
T  25234946 agctcatttgataagggataatgcacaataagtgtaggggttgaggttcgaaccccagacaccccagttattcatctttaaggtgaatttctcta 25234852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 13210258 - 13210151
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaa------ttccggacatcccacttattcatctttaaggtgaat 390  Q
    |||||||||||||||||| || |||||||||||||||||||||||  |||  ||||||       | |||||| | ||||||||||| ||||||||||||    
T  13210258 gagcttagctcatttggtcagggataatgcacaatatgtgcaggggccggggttcgaaccccgggtacggacacctcacttattcat-tttaaggtgaat 13210160  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  13210159 ttctctagc 13210151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 41272066 - 41271981
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||| ||||||||| ||||||| ||||| | ||||||| || |  |||||| |||||||| |||||||||||||||| |||||||    
T  41272066 agctcgtttggtaagggataatgtacaatttatgcagggttcagggttcgaactccggacaccccacttattcatcttaaaggtga 41271981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 44251383 - 44251319
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||  ||||||| ||||||| |||| ||||||||||||||||||||||| ||||||    
T  44251383 tgcaggggtcggggttcgaatcccggacaccccatttattcatctttaaggtgaatttttctagc 44251319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 37574269 - 37574375
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||   | | |||||||  |||  ||| ||  |||| || |||||||||||| ||||||||||||||    
T  37574269 cccatgagcttagctcatttggtaagggataatgcatt-tgtatgcaggggccggggttcaaaccccgggcaccccacttattcacctttaaggtgaatt 37574367  T
Q  392 tctctagc 399  Q
    ||||||||    
T  37574368 tctctagc 37574375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 399
Target Start/End: Original strand, 2931133 - 2931167
Alignment:
Q  365 cccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||||||||||||||||    
T  2931133 cccacttattcatctttaaggtgaatttctctagc 2931167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 35733375 - 35733477
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||| | |||||||| ||||| ||| |||   ||||||| |||   || |||||||||||| |||||||||||| ||||||||||| ||||| |    
T  35733375 gagcttagcttacttggtaagggataacgcataattgatgcagggctcgagattggaattccggacaccccacttattcacctttaaggtgagtttcttt 35733474  T
Q  397 agc 399  Q
    |||    
T  35733475 agc 35733477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 2824634 - 2824691
Alignment:
Q  338 agggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||| ||||| |||||| |||||||||||||||  |||| ||||||||||||||||||    
T  2824634 aggggtcggagttcgaactccggacatcccactatttcacctttaaggtgaatttctc 2824691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 24570223 - 24570308
Alignment:
Q  309 tttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttct 394  Q
    ||||||||| ||||||||||||||| || |||| | ||  ||||||  ||| ||| || ||||||||| |||||||||||||||||    
T  24570223 tttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccgaacaccctacttattcaactttaaggtgaatttct 24570308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 39387473 - 39387558
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattca 376  Q
    ||||| || |||||||||||||||||| ||||||||| ||| |||||||||  | |||||||||  |  ||||||| |||||||||    
T  39387473 tcccatgaacttagctcatttggtaagggataatgcataatttgtgcaggggcccgacttcgaaccctagacatcctacttattca 39387558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 49635428 - 49635533
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| |||| |||  |   ||| ||  ||  ||||| ||||||||||| ||||| |||||||    
T  49635428 cccatgagtttagctcatttggtaagggataatgcacaatatatgcaaggactgagattcaaaccccatacatctcacttattcatttttaaagtgaatt 49635527  T
Q  392 tctcta 397  Q
    ||||||    
T  49635528 tctcta 49635533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 21200569 - 21200632
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||  |||||| ||||| || |||||||||||| ||||||||||||||||||||||    
T  21200569 tgcaggggtcggggttcgaactccggtcaccccacttattca-ctttaaggtgaatttctctagc 21200632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 22525441 - 22525489
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||||| ||||||| |||||||||||| ||||||| ||||||||||||    
T  22525441 ttcgaatcccggacaccccacttattcacctttaagatgaatttctcta 22525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 52366216 - 52366252
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    ||||||||||||| |||||||||||||||||||||||    
T  52366216 ctcatttggtaagggataatgcacaatatgtgcaggg 52366252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 8716481 - 8716442
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcag 339  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  8716481 cttagctcatttgataagggataatgcacaatatgtgcag 8716442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 49607614 - 49607653
Alignment:
Q  360 gacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  49607614 gacaccccacttattcacctttaaggtgaatttctctagc 49607653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 23234047 - 23233941
Alignment:
Q  293 ccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaattt 392  Q
    ||||||||||| |||||||  ||||| |||||||||||| ||||||||| | |   ||| || |||  ||| ||||||||||||| || || ||||||||    
T  23234047 ccacgagcttaactcattttataagaaataatgcacaatttgtgcaggggttgtggttcaaactccaaacaccccacttattcatattaaaagtgaattt 23233948  T
Q  393 ctctagc 399  Q
     ||||||    
T  23233947 ttctagc 23233941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 399
Target Start/End: Original strand, 56555617 - 56555651
Alignment:
Q  365 cccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||| ||||||||||||||||||||||    
T  56555617 cccacttattcacctttaaggtgaatttctctagc 56555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 9199545 - 9199512
Alignment:
Q  117 attgcttgaccagacaagctttagaaagaaagat 150  Q
    |||||||||||||||||||||||| |||||||||    
T  9199545 attgcttgaccagacaagctttagtaagaaagat 9199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 9199783 - 9199750
Alignment:
Q  117 attgcttgaccagacaagctttagaaagaaagat 150  Q
    |||||||||||||||||||||||| |||||||||    
T  9199783 attgcttgaccagacaagctttagtaagaaagat 9199750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 20241433 - 20241474
Alignment:
Q  358 cggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||| ||||||| |||||||| ||||||||||||||||||    
T  20241433 cggacaccccactttttcatcttaaaggtgaatttctctagc 20241474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 399
Target Start/End: Original strand, 32037573 - 32037670
Alignment:
Q  302 tagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||| || ||||||||| | ||| ||||||| ||||  ||| ||| | ||| |||||| |||||||  ||||| |||||||||||||||    
T  32037573 tagctcacttggttagggataatgcatattatatgcaggggtcggggttcaaatcctggatatcccatttattcacatttaaagtgaatttctctagc 32037670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 394
Target Start/End: Original strand, 51707188 - 51707217
Alignment:
Q  365 cccacttattcatctttaaggtgaatttct 394  Q
    ||||||||||||||||||||||||||||||    
T  51707188 cccacttattcatctttaaggtgaatttct 51707217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 9884829 - 9884921
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaattt 392  Q
    |||||||||||||||||| |||||||||  |||  | ||||||||||| ||||||| || ||||  | |||  |||| ||||||||| |||||    
T  9884829 cttagctcatttggtaagggataatgcattataaatacagggatcggagttcgaatcccagacactctactatttcagctttaaggttaattt 9884921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 37889662 - 37889598
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||  ||||||  ||||||| | ||||||||||  |||||||||||||||||||||    
T  37889662 tgcaggggtcggggttcgaaccccggacacctcacttattcacttttaaggtgaatttctctagc 37889598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 40273817 - 40273924
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  40273817 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 40273916  T
Q  392 tctctagc 399  Q
    ||||||||    
T  40273917 tctctagc 40273924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 48433809 - 48433702
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||| ||  ||||||| |||||||||||||||||||||||||||    
T  48433809 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtgaatt 48433710  T
Q  392 tctctagc 399  Q
    ||||||||    
T  48433709 tctctagc 48433702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 31793469 - 31793571
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| ||||  ||||||  ||||||| ||||||||||||||||||||||| ||||||||    
T  31793469 gagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtggatttctct 31793568  T
Q  397 agc 399  Q
    |||    
T  31793569 agc 31793571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 399
Target Start/End: Original strand, 43440701 - 43440792
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||| ||||||||||||||||||||| | ||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  43440701 atttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattccagacaccccacttattcatctttaaggtgaatttctctagc 43440792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 403
Target Start/End: Original strand, 12166086 - 12166189
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||| ||||||||||||| |||||||||   ||  ||||||  || |||| |||||||||||||||||||||||||||||||||||    
T  12166086 cttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctctagc 12166185  T
Q  400 tact 403  Q
    ||||    
T  12166186 tact 12166189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 4956174 - 4956084
Alignment:
Q  309 tttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||||  | ||||| |||||||||||||||||||||||||||||||||||    
T  4956174 tttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagc 4956084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 392
Target Start/End: Complemental strand, 36528318 - 36528218
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||  |||| ||||| ||||||  ||||||||||||| ||||||| |||||||||||||    
T  36528318 cccatgagcttaactcatttggtaagggataatgcacaatatgtataggggtcggagttcgaaccccggacatcccacctattcatttttaaggtgaatt 36528219  T
Q  392 t 392  Q
    |    
T  36528218 t 36528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 46243292 - 46243392
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||| | ||| |  |||||||||| |||||| |||| ||| |||||||||||| |||||||||||||||||||    
T  46243292 gagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtgaatttctct 46243391  T
Q  397 a 397  Q
    |    
T  46243392 a 46243392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 403
Target Start/End: Complemental strand, 3961507 - 3961396
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||||||| ||| ||||||||||||  ||||||||||||| ||||||| |  |||  ||||||  ||||||||||||||||||||| || ||||||||||    
T  3961507 cccacgagtttaactcatttggtaaaggataatgcacaatttgtgcagaggccggggttcgaaccccggacatcccacttattcattttaaaggtgaatt 3961408  T
Q  392 tctctagctact 403  Q
    ||||||||||||    
T  3961407 tctctagctact 3961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 23824690 - 23824584
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||  ||   ||||||  ||||||| || ||||||||||||||||||||||||    
T  23824690 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcatgggccgaggttcgaa-cccggacaccctacttattcatctttaaggtgaatt 23824592  T
Q  392 tctctagc 399  Q
    ||||||||    
T  23824591 tctctagc 23824584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 33248901 - 33248799
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||  ||||||  ||||||| || ||||||||||||||||||||||||    
T  33248901 cccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatt 33248802  T
Q  392 tct 394  Q
    |||    
T  33248801 tct 33248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 42554635 - 42554737
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||  ||||||  ||||| | || ||||||||||||||| |||||||||| ||    
T  42554635 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggatacccgacttattcatctttatggtgaatttccct 42554734  T
Q  397 agc 399  Q
    |||    
T  42554735 agc 42554737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 27454006 - 27454115
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctt-taaggtgaa 389  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||| |||   ||||||   |||||| ||||||||||||||||  ||||||||    
T  27454006 tcccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgaggttcgaacctcggacaccccacttattcatcttaaaaggtgaa 27454105  T
Q  390 tttctctagc 399  Q
    ||||||||||    
T  27454106 tttctctagc 27454115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 24029981 - 24030088
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| |||||||||||| |||| |||||||||||||||||| ||||  |||  ||||||  || |||| |||| ||||||||||||||||||||||    
T  24029981 cccatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggtgaatt 24030080  T
Q  392 tctctagc 399  Q
    ||||||||    
T  24030081 tctctagc 24030088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 34322113 - 34321998
Alignment:
Q  302 tagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag-ct 400  Q
    ||||||||||| |||| ||||||||||||||||||||||||  ||  || |||| || |||| |||| ||||||||||| || |||||||||||||| ||    
T  34322113 tagctcatttgataagggataatgcacaatatgtgcagggactggggtttgaatcccagacaccccatttattcatcttaaacgtgaatttctctagcct 34322014  T
Q  401 acttgacaaaacaaaa 416  Q
    ||||||||||| ||||    
T  34322013 acttgacaaaaaaaaa 34321998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 11072126 - 11072251
Alignment:
Q  25 ttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcgtggaa-tgggagggaaaaaactaggttatgaattggggttagggattgctt 123  Q
    ||||||||||  ||| ||||||||| |||||   |  ||||| ||||||| ||| ||||||||||||| ||||||||  |||| ||||||||||||||||    
T  11072126 ttattgcgtggcaaatggatgaggatgtcaaatctacgaatttattgcgttgaaatgggagggaaaaagctaggttaa-aattagggttagggattgctt 11072224  T
Q  124 gaccagacaagctttagaaagaaagat 150  Q
    |||| ||||||||||||||||||||||    
T  11072225 gaccggacaagctttagaaagaaagat 11072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 38378231 - 38378320
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||| |||||||||||||||||||||||  |||  || |||  ||||||| ||||||||||||| |||||||||||||||||||    
T  38378231 atttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccccggacaccccacttattcatttttaaggtgaatttctcta 38378320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 399
Target Start/End: Original strand, 48619789 - 48619899
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    |||||||| ||| ||| ||||||||||||  ||||||| ||||||||||||||| | ||  |||||| | | ||||  ||||||||||||||||||||||    
T  48619789 agttcccatgagtttaactcatttggtaaaggataatgtacaatatgtgcaggggttggg-ttcgaacttcagacactccacttattcatctttaaggtg 48619887  T
Q  388 aatttctctagc 399  Q
    ||||||||||||    
T  48619888 aatttctctagc 48619899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 42338346 - 42338266
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccactta 372  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||||  |||  ||||||| ||||||| ||||||||    
T  42338346 cccatgagcttagctcatttggtaaggaataatgcacaatatgtgcaggggacggggttcgaatcccggacaccccactta 42338266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 22323617 - 22323743
Alignment:
Q  14 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcg-tggaatgggagggaaaaaactaggttatgaattggggtt 112  Q
    |||||||||| ||||||||||||||| || |||||| |||||   |||||||||| |||| | ||||||||||||||   |||||||| || || |||||    
T  22323617 atgaaatgaatttattgcgtgttaaaagggtgaggaggtcaaacctgtgaattaaatgcgttagaatgggagggaaattgctaggtta-gatttagggtt 22323715  T
Q  113 agggattgcttgaccagacaagctttag 140  Q
    |||| | ||||||||| |||||||||||    
T  22323716 agggttagcttgaccaaacaagctttag 22323743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 22729038 - 22728984
Alignment:
Q  14 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaa 68  Q
    |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  22729038 atgaaatgaatttattgcgtgttaaatggatgaggaagtcaaaggtgtgaattaa 22728984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 23602275 - 23602377
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||| ||||  |||||||| | ||| ||||| || |||| ||||||  ||||||| | |||||||||| ||||||||||||||||| |    
T  23602275 gagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttcttt 23602374  T
Q  397 agc 399  Q
    |||    
T  23602375 agc 23602377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 3902372 - 3902323
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  3902372 cccacgagcttagctcatttggtaagggataatgcaaaatatgtgcaggg 3902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 28712369 - 28712469
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||||||||| ||||||| | ||||||||||||||||| | ||||||||  |||   | || |||||||||||||| ||||||||||||    
T  28712369 gagcttaactcatttggtaagggataatgtataatatgtgcagggatcg-agttcgaattttggatgcctcatttattcatctttaaagtgaatttctct 28712467  T
Q  397 ag 398  Q
    ||    
T  28712468 ag 28712469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 46266664 - 46266769
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||| |||  |||  ||||||    | |||||||||||||||||||| ||||||||||    
T  46266664 cccatgagcttaactcatttggtaagggataatgcacaatttgtgcgggggacggggttcgaaccttgaacatcccacttattcatcttaaaggtgaatt 46266763  T
Q  392 tctcta 397  Q
    | ||||    
T  46266764 tatcta 46266769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 26456104 - 26455997
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggac-ttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    |||| ||||||||||||||||||||| || ||||||||||||||||||||| | ||| || |||  || ||||  ||| ||||||| ||| |||||||||    
T  26456104 cccatgagcttagctcatttggtaagggacaatgcacaatatgtgcaggga-ctgacgtttgaaccccagacactccagttattcaccttaaaggtgaat 26456006  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  26456005 ttctctagc 26455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 14707289 - 14707395
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||   ||| ||||||| | ||  ||||||  ||||||| |||||||||||| |||||  |||||||    
T  14707289 cccatgagcttagctcatttggtaagggataatgca-tttatatgcaggggttggggttcgaaccccggacaccccacttattcacctttatagtgaatt 14707387  T
Q  392 tctctagc 399  Q
    ||||||||    
T  14707388 tctctagc 14707395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 22323466 - 22323520
Alignment:
Q  14 atgaaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaa 68  Q
    |||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||    
T  22323466 atgaaatgaatttagtgcgtgttaaatggatgaggaagtcaaaggtgtgaattaa 22323520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 397
Target Start/End: Complemental strand, 3889895 - 3889794
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcg-gacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    ||||||||||||||||  ||| ||||||| ||||||| |||||||  |  |  ||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  3889895 gagcttagctcatttgacaagggataatgtacaatatatgcagggggccagggttcgaaccccggacaccccacttattcatcttaaaggtgaatttctc 3889796  T
Q  396 ta 397  Q
    ||    
T  3889795 ta 3889794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 24315456 - 24315348
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    |||||||  ||||||||||||||| ||||  |||||||||||||||||| |||| ||||  ||||||  ||  |||| ||||||||| || |||||||||    
T  24315456 agttcccgtgagcttagctcatttagtaatggataatgcacaatatgtgtaggggtcggggttcgaaccccatacattccacttatttat-tttaaggtg 24315358  T
Q  388 aatttctcta 397  Q
    || |||||||    
T  24315357 aacttctcta 24315348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 5228123 - 5228173
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| | ||||| |||||||||||| ||||||||||||||||||||||    
T  5228123 ttcgaatcctggacaccccacttattcacctttaaggtgaatttctctagc 5228173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 20013634 - 20013684
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||| ||||||||||||||||| || ||||||| ||||||||||||||    
T  20013634 ttcgaatcccggacatcccacttatccacctttaagatgaatttctctagc 20013684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 37918684 - 37918781
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattcc-ggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||| |||||||| |||| |||||||||||| ||||| |||  ||||  ||||||| || ||||| | ||||||||||||||| |||||||||||||||    
T  37918684 cttaactcatttgataagggataatgcacaa-atgtgtaggcgtcggggttcgaatccccggacacctcacttattcatcttttaggtgaatttctcta 37918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 44986595 - 44986689
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    ||||||||||||||||||||| |||||||||||||  |||||| |  |||  ||||||  ||  ||| ||||||||| |||||| ||||||||||    
T  44986595 gagcttagctcatttggtaagggataatgcacaattagtgcagtggccgggattcgaaccccaaacaccccacttatccatcttaaaggtgaatt 44986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 15025152 - 15025257
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| ||||||||| | | | | |||||  |||  ||| ||  ||| ||| |||||||||||| ||||||||||||||    
T  15025152 cccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtgaatt 15025251  T
Q  392 tctcta 397  Q
    ||||||    
T  15025252 tctcta 15025257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 20529957 - 20529998
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  20529957 ccggacaccccacttattcacctttaaggtgaatttctctag 20529998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 22156110 - 22156198
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||| ||||||| ||||||||||| ||||||    ||||||  | ||||| ||||||||||||||| |||| ||||||||||||    
T  22156110 atttggtaagggataatgtacaatatgtgc-gggatcatggttcgaacgctggacaccccacttattcatctataagatgaatttctcta 22156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 22212025 - 22212113
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||| ||||||| ||||||||||| ||||||    ||||||  | ||||| ||||||||||||||| |||| ||||||||||||    
T  22212025 atttggtaagggataatgtacaatatgtgc-gggatcatggttcgaacgctggacaccccacttattcatctataagatgaatttctcta 22212113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 35308015 - 35307926
Alignment:
Q  310 ttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccactt-attcatctttaaggtgaatttctctag 398  Q
    ||||||||  |||||||| ||||| ||||||  ||||  |||||||| || ||| ||||||| ||||| |||||||||||||||||||||    
T  35308015 ttggtaaggaataatgcataatatatgcaggactcgggattcgaatttcgaacaccccactttattcacctttaaggtgaatttctctag 35307926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 42841843 - 42841774
Alignment:
Q  329 aatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    |||||||||| ||| |||  ||||||  || |||| |||||||||||||||| |||||||||||||||||    
T  42841843 aatatgtgcaaggaccggggttcgaaccccagacaccccacttattcatcttaaaggtgaatttctctag 42841774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 25775712 - 25775608
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| |||||||| |||||||  ||||||| | ||||| |||| | | ||   |||||| |||  ||| |||||||||||||||||||||||||||    
T  25775712 cccatgagtttagctcacttggtaaaggataatgtataatatatgcaagaaccgaggttcgaactccaaacaccccacttattcatctttaaggtgaatt 25775613  T
Q  392 tctct 396  Q
    |||||    
T  25775612 tctct 25775608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 397
Target Start/End: Complemental strand, 18128929 - 18128899
Alignment:
Q  367 cacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||||||||||||||    
T  18128929 cacttattcatctttaaggtgaatttctcta 18128899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 395
Target Start/End: Complemental strand, 44662557 - 44662459
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||||||| | |||||| |||||||||  || | |||||||  |||  ||||||  ||||||| ||||||  |||| ||||||||||||||||||    
T  44662557 gagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttctc 44662459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 1575690 - 1575739
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||| ||||||| ||||||||||||| |||||| |||||||||| |||||    
T  1575690 cccatgagcttaactcatttggtaagggataatacacaatatgtacaggg 1575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 10900065 - 10900110
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaata 332  Q
    ||||||||| |||||||||||||||||||||  |||||||| ||||    
T  10900065 tagttcccatgagcttagctcatttggtaaggaataatgcataata 10900110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 26606134 - 26606101
Alignment:
Q  366 ccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||| ||||||||||||||||||||||    
T  26606134 ccacttattcacctttaaggtgaatttctctagc 26606101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 33413903 - 33413935
Alignment:
Q  367 cacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||| ||||||||||||||||||    
T  33413903 cacttattcatcttaaaggtgaatttctctagc 33413935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 31250143 - 31250250
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  31250143 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 31250242  T
Q  392 tctctagc 399  Q
    ||||||||    
T  31250243 tctctagc 31250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 38503356 - 38503249
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  38503356 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 38503257  T
Q  392 tctctagc 399  Q
    ||||||||    
T  38503256 tctctagc 38503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 43227867 - 43227969
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  43227867 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctct 43227966  T
Q  397 agc 399  Q
    |||    
T  43227967 agc 43227969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 17077362 - 17077464
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| ||||  ||||||  ||||||| |||||||||||||||| ||||||||||| |||    
T  17077362 gagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaaaggtgaatttatct 17077461  T
Q  397 agc 399  Q
    |||    
T  17077462 agc 17077464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 42208911 - 42209018
Alignment:
Q  290 ttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaa 389  Q
    |||||| ||||||||||||||| ||||| |||||| ||||||||||||||||  ||   |||||| |||||||| | |||||||||||||||||||||||    
T  42208911 ttcccatgagcttagctcatttagtaagggataatacacaatatgtgcagggc-cgaggttcgaactccggacacctcacttattcatctttaaggtgaa 42209009  T
Q  390 tttctctag 398  Q
    |||||||||    
T  42209010 tttctctag 42209018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 5039677 - 5039783
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||||||| ||  |||  |||||| | |||||| |||||||||||||||||||||| ||||    
T  5039677 cccatgagcttaactcatttggtaag-gataatgtacaatatgtgcaagggccggggttcgaacttcggacaccccacttattcatctttaaggtaaatt 5039775  T
Q  392 tctctagc 399  Q
    ||||||||    
T  5039776 tctctagc 5039783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 931037 - 930931
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||| ||||||||| |||||| || |||||||||||||||||||| | ||  ||||||   | ||||||||||||||||||||| ||||||||||    
T  931037 cccatgagcatagctcattcggtaagggacaatgcacaatatgtgcaggggttggggttcgaacctcagacatcccacttattcatcttaaaggtgaatt 930938  T
Q  392 tctctag 398  Q
    |||||||    
T  930937 tctctag 930931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 33545476 - 33545379
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||| || |||   |||||| ||| |||||||||||||||||||||||||||||||    
T  33545476 ttagctcatttgctatgggataatgcacaatatgtgcaggggtcggagtttgaacctcggacacccc-cttattcatctttaaggtgaatttctctagc 33545379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 4395950 - 4395843
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| ||||||||| ||  ||||||||| ||| |||||||||  |||| ||||||  || |||| |||| ||||||||||||||||||||||    
T  4395950 cccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtgaatt 4395851  T
Q  392 tctctagc 399  Q
    ||||||||    
T  4395850 tctctagc 4395843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 87787 - 87888
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||| | ||||||||||||| ||||||||||||||| |||| || ||||| |||||| ||| |||| ||||  ||||||| |||||||||||||    
T  87787 cccatgagctcaactcatttggtaagggataatgcacaatatatgcaagggtcggagttcgaactccagacaccccaactattcatttttaaggtgaatt 87886  T
Q  392 tc 393  Q
    ||    
T  87887 tc 87888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 15106990 - 15106881
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    ||||||||  |||||| || |||||||||| ||||||||||||| ||||||| | ||||  ||||||  ||||||| |||||||||||||||||||  |     
T  15106990 agttcccattagcttaacttatttggtaagggataatgcacaatttgtgcagaggtcggggttcgaaccccggacaccccacttattcatctttaaaata 15106891  T
Q  388 aatttctcta 397  Q
    ||||||||||    
T  15106890 aatttctcta 15106881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 395
Target Start/End: Complemental strand, 15254249 - 15254151
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattca-tctttaaggtgaatttctc 395  Q
    |||||||||||||||| |||||||||||||||||||| || |||| |  || ||||||| ||| |||||||||||||||| | |||||||| ||||||||    
T  15254249 gagcttagctcatttgttaagagataatgcacaatatatgtaggggttaga-ttcgaatcccgaacatcccacttattcattttttaaggtaaatttctc 15254151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 15470715 - 15470613
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgca-gggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||  |||||||||||| |||||||||||||||||||| ||| |  || ||||||  || |||| |||| ||||||||||||||||||||||||||    
T  15470715 gagcttaattcatttggtaagggataatgcacaatatgtgcaagggctgaga-ttcgaaccccagacaccccatttattcatctttaaggtgaatttctc 15470617  T
Q  396 tagc 399  Q
    ||||    
T  15470616 tagc 15470613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 3294084 - 3294181
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttct 394  Q
    ||||||| || | ||| |||| ||||||||| ||| | |||||||  |||  ||||||||||||||| |||| |||||||||||||||||||||||||    
T  3294084 gagcttaacttacttgttaagggataatgcataatttatgcaggggccggggttcgaattccggacaacccatttattcatctttaaggtgaatttct 3294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 34729481 - 34729572
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||| |||||||| ||||||||| | ||| ||||||| ||||  ||||||  ||||||| |||||||||||| ||||||||||||||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaac-ccggacaccccacttattcacctttaaggtgaatttctcta 34729572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 41836051 - 41836139
Alignment:
Q  307 catttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||||||  || | ||| ||||||||||||| ||||  |||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  41836051 catttggtaaggaatgaagcataatatgtgcaggggtcggggttcgaacttcggacattccatttattcatctttaaggtgaatttctc 41836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 1572115 - 1572213
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||| |||| ||| ||||||| | |||||||||   ||  ||||||  ||||||  |||||||||||||||| ||||||||||||||||||    
T  1572115 ttagctcatttgttaagggattatgcacattttgtgcaggggctggggttcgaaccccggactccccacttattcatcttaaaggtgaatttctctagc 1572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 12375511 - 12375399
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattc------cggacatcccacttattcatctttaagg 385  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||  |||  ||||||  |      |||||| | ||||||||||| |||||||    
T  12375511 cccatgagcttagctcatttggtaatggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 12375413  T
Q  386 tgaatttctctagc 399  Q
    ||||||||||||||    
T  12375412 tgaatttctctagc 12375399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 416
Target Start/End: Original strand, 43263209 - 43263326
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||        |||||  | ||||| |||| |||||||||||||| |||||||    
T  43263209 cccatgagcttaactcatttggtaagagataatgcacaacatgtacaggg-------gtcgaaccctggacaccccagttattcatctttaaagtgaatt 43263301  T
Q  392 tctctagctacttgacaaaacaaaa 416  Q
    ||  | |||||||||||||| ||||    
T  43263302 tccgtggctacttgacaaaaaaaaa 43263326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 354
Target Start/End: Complemental strand, 42643891 - 42643840
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaa 354  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| | ||||||    
T  42643891 agctcatttggtaagggataatgcacaatatgtgcaggggtcgaagttcgaa 42643840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 5263171 - 5263272
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||  |||||||||||||||||| ||||   |   ||||||  |  |||| | || ||||||||||||||| ||||||||||||    
T  5263171 agcttagctcatttggtaatggataatgcacaatatgtgtagggggtgatgttcgaacccgagacaccacatttattcatctttaagctgaatttctcta 5263270  T
Q  398 gc 399  Q
    ||    
T  5263271 gc 5263272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 9628118 - 9628215
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttct 394  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||  ||||  ||||||   | |||| || | ||||||| |||||||||||| ||||    
T  9628118 gagcttaactcatttggtaagagataatgcataatatatgcaggattcggggttcgaacctcagacaccctatttattcacctttaaggtgaaattct 9628215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 15680992 - 15680895
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||||||| ||||||||  |||||||| ||||| ||| | | ||  | ||||||   |||||| |||||||||||| ||||||||||||||||||||    
T  15680992 cttagctcacttggtaaggaataatgcataatatatgcggtggtcaaaattcgaacctcggacaccccacttattcacctttaaggtgaatttctcta 15680895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 6671828 - 6671785
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctt-taaggtgaatt 391  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  6671828 ttcgaattccggacatctcacttattcatcttataaggtgaatt 6671785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 20191443 - 20191541
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| |||| |||||||| |||||||||   ||| ||||||| ||||  ||||||  |||||||  ||||||||||| ||||||||| |||||||||    
T  20191443 gagcttaactcacttggtaagggataatgcatt-tatatgcaggggtcggggttcgaaccccggacactccacttattcacctttaaggtaaatttctct 20191541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 12256581 - 12256523
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaat 355  Q
    |||||||||||| |||||| ||||||||||| ||||| ||||||| ||||  |||||||    
T  12256581 gagcttagctcacttggtatgagataatgcataatatatgcaggggtcggggttcgaat 12256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 34266324 - 34266275
Alignment:
Q  25 ttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcgt 74  Q
    |||||||||| |||||||||||| |||||||| ||| ||||| |||||||    
T  34266324 ttattgcgtgataaagggatgagaaagtcaactgtgagaatttattgcgt 34266275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 36434580 - 36434707
Alignment:
Q  17 aaatgaagttattgcgtgttaaagggatgaggaagtcaacggtgtgaattaattgcgtggaatgggagggaaaaaactaggttatgaattggggttaggg 116  Q
    ||||||| ||||||||||||||| || |||| | |||||   |||||||||| |||||||     ||||||||   |||||||| || || |||||||||    
T  36434580 aaatgaatttattgcgtgttaaaagggtgagaaggtcaaacctgtgaattaactgcgtgg-----gagggaaattgctaggtta-gatttagggttaggg 36434673  T
Q  117 attgcttgaccagacaagctttagaaagaaagat 150  Q
     | |||||||||||||| |||||| ||| |||||    
T  36434674 ttagcttgaccagacaaactttagtaagtaagat 36434707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 42902090 - 42902057
Alignment:
Q  366 ccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||||||| ||||||||||||    
T  42902090 ccacttattcatctttaaggtaaatttctctagc 42902057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 462010 - 462046
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtg 336  Q
    |||||||||||||||||| | ||||||||||||||||    
T  462010 cttagctcatttggtaaggggtaatgcacaatatgtg 462046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 15696212 - 15696252
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||||||||||| |||| |||||||||||||||||| ||||    
T  15696212 ttagctcatttgataagggataatgcacaatatgtgtaggg 15696252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 42260776 - 42260728
Alignment:
Q  335 tgcagggatcggacttcgaattccggacatcccacttattcatctttaa 383  Q
    ||||||| ||||  |||||| ||||||||||||||||||||| ||||||    
T  42260776 tgcagggttcgggtttcgaactccggacatcccacttattcacctttaa 42260728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 5904464 - 5904362
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagct 400  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||  ||||||  |||||||||||||||||||||||||||| |||||||||||||||    
T  5904464 ttagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccccggacatcccacttattcatctttaagatgaatttctctagct 5904365  T
Q  401 act 403  Q
    |||    
T  5904364 act 5904362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 41454926 - 41454819
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  ||||||| ||||||||||||||||||| |||||||    
T  41454926 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgtgaatt 41454827  T
Q  392 tctctagc 399  Q
    ||||||||    
T  41454826 tctctagc 41454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 1032566 - 1032673
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||   ||  ||||||  || |||| |||||||||||||||||||||||||||    
T  1032566 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatt 1032665  T
Q  392 tctctagc 399  Q
    ||||||||    
T  1032666 tctctagc 1032673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 38289337 - 38289227
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||   |  ||| ||||||||||||||||||||||||    
T  38289337 gttcccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggtga 38289238  T
Q  389 atttctctagc 399  Q
    |||||||||||    
T  38289237 atttctctagc 38289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 41845523 - 41845421
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||  ||| ||| || | ||||||||||||||||||||||||| |    
T  41845523 gagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggtgaatttcttt 41845424  T
Q  397 agc 399  Q
    |||    
T  41845423 agc 41845421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 4259860 - 4259962
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||  |||  ||| ||  ||||||  ||||||||||||||||||||||||||||||||    
T  4259860 gagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtgaatttctct 4259959  T
Q  397 agc 399  Q
    |||    
T  4259960 agc 4259962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 397
Target Start/End: Complemental strand, 38545020 - 38544919
Alignment:
Q  295 acgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttct 394  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||||| |  ||||||| ||| ||| |||||||||| |||||||||||| ||||||    
T  38545020 acgagcttacctcatttggtaagggataatgcacaatatgtgcatggatcagggttcgaatcccgaaca-cccacttatttatctttaaggtggatttct 38544922  T
Q  395 cta 397  Q
    |||    
T  38544921 cta 38544919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 39104612 - 39104709
Alignment:
Q  301 ttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||||||||||| ||||||||||||||||||||| |  |||  ||||||  ||||||| ||||||||||||||||||||||| |||||||||||    
T  39104612 ttagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggaca-cccacttattcatctttaaggtggatttctctagc 39104709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 34038047 - 34037942
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| || ||||| |||| |||||| ||||||||||||||||  |||| ||||||| || |||||||||||||||||||||||| |||||||    
T  34038047 cccatgagcttaacttatttgataagggataatacacaatatgtgcagggggcggagttcgaatcccagacatcccacttattcatctttaaagtgaatt 34037948  T
Q  392 tctcta 397  Q
    | ||||    
T  34037947 tttcta 34037942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 31821132 - 31821024
Alignment:
Q  290 ttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctt-taaggtga 388  Q
    |||||| ||||||| |||||||||||| |||||||||||||| |||||| |||||||  |||||| |||| ||||||||||||||| ||||  ||| |||    
T  31821132 ttcccatgagcttatctcatttggtaaaagataatgcacaatttgtgcatggatcgggattcgaactccgaacatcccacttattcttcttaaaagttga 31821033  T
Q  389 atttctcta 397  Q
    |||||||||    
T  31821032 atttctcta 31821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 8349576 - 8349477
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||| |||||| || ||||| |||||||  |||| |||||| |||| ||| |||||||||||||||||||| ||||||| ||||    
T  8349576 agcttagctcatttggtaagtgataatacagaatatatgcaggggccggagttcgaactccgaacaccccacttattcatctttaagatgaatttatcta 8349477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 19733162 - 19733063
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| ||||  ||||||| ||| ||| |  | ||||||||||||||||||||||||||||    
T  19733162 agcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtgaatttctcta 19733063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 409
Target Start/End: Original strand, 45536710 - 45536831
Alignment:
Q  288 agttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtg 387  Q
    |||||||| ||| |||| ||||||| |||| ||||||||| ||| |||||||||  |||| ||||||  ||||||| |||||||||||||||| |  |||    
T  45536710 agttcccatgaggttaggtcatttgataagggataatgcaaaatttgtgcaggggccggagttcgaaccccggacaccccacttattcatcttaatagtg 45536809  T
Q  388 aatttctctagctacttgacaa 409  Q
    |||||||||||| ||| |||||    
T  45536810 aatttctctagccactagacaa 45536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 297 - 397
Target Start/End: Complemental strand, 33820489 - 33820389
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||| | |||||| |||||| ||||||| | ||||  ||||||| || |||| |||| ||||||||||| |||||||||||||||    
T  33820489 gagcttagctcatttggtatgggataatacacaatttgtgcagaggtcggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttctct 33820390  T
Q  397 a 397  Q
    |    
T  33820389 a 33820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 296 - 396
Target Start/End: Complemental strand, 43456747 - 43456648
Alignment:
Q  296 cgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||||||||||||||||| ||||||||||||||| || | || ||||  ||||||  ||||||| ||||||||||||| |||||||||| ||||||    
T  43456747 cgagcttagctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccccggacaccccacttattcat-tttaaggtgattttctc 43456649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 22652684 - 22652786
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||  |||  ||||||  ||||||| |||| |||||||| || |||||||||||||||    
T  22652684 gagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaaaggtgaatttctct 22652783  T
Q  397 agc 399  Q
    |||    
T  22652784 agc 22652786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 38063973 - 38064078
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||  |||||||||||| ||||||||||||| ||||||||||  ||   | |||  || |||| |||||||||||||||||||||||||||    
T  38063973 cccatgagcttaattcatttggtaagggataatgcacaatttgtgcagggactgggggttgaaccccagacaccccacttattcatctttaaggtgaatt 38064072  T
Q  392 tctcta 397  Q
    ||||||    
T  38064073 tctcta 38064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 3311435 - 3311543
Alignment:
Q  291 tcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    ||||| ||||||| ||||||||| ||| ||||||| ||||| | |||||||||| |  ||||||  ||||||| |||||||||||||||| ||| |||||    
T  3311435 tcccatgagcttaactcatttggcaagggataatgtacaatttatgcagggatcagggttcgaaccccggacaccccacttattcatcttaaagatgaat 3311534  T
Q  391 ttctctagc 399  Q
    || ||||||    
T  3311535 ttttctagc 3311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 16973031 - 16973103
Alignment:
Q  305 ctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcat 377  Q
    |||||||| |||| ||||||||||||||||||||||| ||||  |||||| ||||||||||| ||||||||||    
T  16973031 ctcatttgttaagggataatgcacaatatgtgcaggggtcggtgttcgaactccggacatcctacttattcat 16973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 44828532 - 44828424
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatc-tttaaggtgaat 390  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||   ||  ||||||  || |||| | |||||||||||| ||||||||||||    
T  44828532 cccatgagcttagctcatttggtaagggataatgcacaatttgtgcagggtctggggttcgaaccccagacaccacacttattcatcttttaaggtgaat 44828433  T
Q  391 ttctctagc 399  Q
    |||| ||||    
T  44828432 ttctttagc 44828424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 398
Target Start/End: Complemental strand, 280084 - 279990
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||  ||||||  ||||||| || | |||||||| ||||||||||||||||||||    
T  280084 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 279990  T

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Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 398
Target Start/End: Original strand, 635768 - 635862
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||  ||||||  ||||||| || | |||||||| ||||||||||||||||||||    
T  635768 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 398
Target Start/End: Original strand, 821571 - 821665
Alignment:
Q  303 agctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctag 398  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||  ||||||  ||||||| || | |||||||| ||||||||||||||||||||    
T  821571 agctcatttggtaagggataatgtacaatatgtgcaggggtagg-gttcgaaccccggacacccaatttattcatttttaaggtgaatttctctag 821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 19957412 - 19957313
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    ||||||||| |||||||| ||||||||| | ||| |||||||  ||   ||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  19957412 cttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19957313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 36587749 - 36587646
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||| |||||||||||||||||||  ||||||||||| |||| ||||  ||| ||  ||| ||| |||||||||| ||||||||| ||||||    
T  36587749 cccatgagcttaactcatttggtaagagataaaacacaatatgtgtaggggtcggggttccaaccccgaacaccccacttatttatctttaagatgaatt 36587650  T
Q  392 tctc 395  Q
    ||||    
T  36587649 tctc 36587646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 43413969 - 43413878
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| ||||| ||||||||||||| |||||||||   ||  ||||||| ||  ||| |||||||||||||||||||||||||||||||||||    
T  43413969 attttgtaagggataatgcacaatttgtgcaggggctggggttcgaatcccaaacaccccacttattcatctttaaggtgaatttctctagc 43413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 13906725 - 13906613
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattc------cggacatcccacttattcatctttaagg 385  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||  ||||||  |      |||||| | ||||||||||| |||||||    
T  13906725 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 13906627  T
Q  386 tgaatttctctagc 399  Q
    ||||||||||||||    
T  13906626 tgaatttctctagc 13906613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 36104016 - 36103927
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||  |||  ||||||  ||  ||| ||||||||||||||||||||||    
T  36104016 gagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccccaaacaccccacttattcatctttaaggt 36103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 397
Target Start/End: Complemental strand, 1360228 - 1360129
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||   ||  ||||||  ||||||| ||||||||||||| ||||| ||||||||||||    
T  1360228 gagcttagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccccggacaccccacttattcat-tttaaagtgaatttctct 1360130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 397
Target Start/End: Original strand, 8350438 - 8350538
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatc-tttaaggtgaatttctct 396  Q
    |||||| ||||||||||||| |||||| |||||||| |||||||  |||| ||||||   |||||| |||||||||||||| |||||| ||||||| |||    
T  8350438 agcttaactcatttggtaagtgataatacacaatatatgcaggggccggagttcgaacctcggacaccccacttattcatcttttaagatgaatttatct 8350537  T
Q  397 a 397  Q
    |    
T  8350538 a 8350538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 383
Target Start/End: Original strand, 30466675 - 30466766
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaa 383  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||||||   ||  ||||||   | |||| |||||||||||||||||||    
T  30466675 cccatgagcttagctcatttggtaagggctaatgcacaatatgtgcaggggctggggttcgaacctcagacaccccacttattcatctttaa 30466766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 12831566 - 12831672
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||| ||| ||||||||||||  || ||||||||||||||||||||   ||| ||||||| || ||||||||||||| | | ||| || |||||||    
T  12831566 cccatgagtttaactcatttggtaaaggacaatgcacaatatgtgcagggtctggagttcgaatcccagacatcccacttaattaccttaaaagtgaatt 12831665  T
Q  392 tctctag 398  Q
    |||||||    
T  12831666 tctctag 12831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 10161960 - 10162009
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  10161960 cccatgagcttagctcatctggtaagggataatgcacaatatgtgcaggg 10162009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 10201276 - 10201365
Alignment:
Q  310 ttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||| ||||| || |||| ||||  ||||||  ||||||| | || ||||||| |||||| |||||||||||||||    
T  10201276 ttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattcacctttaaagtgaatttctctagc 10201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 23139070 - 23139178
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatct--ttaaggtgaa 389  Q
    |||| ||||||||||||||||  ||| ||||||||||||| |||||||||  ||   ||||||  || |||| ||||||||||||| |  ||||||||||    
T  23139070 cccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacaccagacaccccacttattcattttattaaggtgaa 23139169  T
Q  390 tttctctag 398  Q
    |||||||||    
T  23139170 tttctctag 23139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 31153507 - 31153592
Alignment:
Q  319 gataatgcacaatatgtgcagggatcggacttcgaattccggaca-tcccacttattcatctttaaggtgaatttctctagctact 403  Q
    |||||||||||||||||||||||  |||  ||||||   ||||||  |||| |||||||||||||||||| |||||||||||||||    
T  31153507 gataatgcacaatatgtgcaggggccgggattcgaacctcggacacccccatttattcatctttaaggtggatttctctagctact 31153592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 399
Target Start/End: Complemental strand, 11052610 - 11052576
Alignment:
Q  365 cccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||||||||||||||||    
T  11052610 cccacttattcatctttaaggtgaatttctctagc 11052576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 29114095 - 29114147
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    ||||||| || ||||||||||||| |||| ||||||||||||| |||||||||    
T  29114095 gttcccatgaacttagctcatttgataagggataatgcacaatttgtgcaggg 29114147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 8145835 - 8145874
Alignment:
Q  358 cggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  8145835 cggacaccccacttattcacctttaaggtgaatttctcta 8145874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 42315411 - 42315340
Alignment:
Q  81 ggagggaaaaaactaggttatgaattggggttagggattgcttgaccagacaagctttagaaagaaagatat 152  Q
    |||||||||| | ||||||| ||||| ||||||   || ||||||||| ||||||||||| |||||||||||    
T  42315411 ggagggaaaatattaggttaagaattagggttactaatagcttgaccaaacaagctttagtaagaaagatat 42315340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 403
Target Start/End: Complemental strand, 11690988 - 11690942
Alignment:
Q  357 ccggacatcccacttattcatctttaaggtgaatttctctagctact 403  Q
    ||||||| |||| ||||||| ||||||||||||||||| ||||||||    
T  11690988 ccggacaccccatttattcacctttaaggtgaatttctttagctact 11690942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 12927799 - 12927865
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaat 355  Q
    ||||||| ||||||| ||||||| ||| | ||||||||||||| ||||||||| ||||  |||||||    
T  12927799 gttcccatgagcttaactcatttagtaggggataatgcacaatttgtgcagggttcggggttcgaat 12927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 45244286 - 45244356
Alignment:
Q  81 ggagggaaaaaactaggttatgaattggggttagggattgcttgaccagacaagctttagaaagaaagata 151  Q
    |||||||||| | ||||||| ||||| ||||||   || |||||||||||||| |||||| ||||||||||    
T  45244286 ggagggaaaatattaggttaagaattagggttactaatagcttgaccagacaaactttagtaagaaagata 45244356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 26083936 - 26083903
Alignment:
Q  117 attgcttgaccagacaagctttagaaagaaagat 150  Q
    |||||||||||||||||||||||| |||||||||    
T  26083936 attgcttgaccagacaagctttagtaagaaagat 26083903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 40103523 - 40103559
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatat 333  Q
    |||||||||||||||| |||| |||||||||||||||    
T  40103523 gagcttagctcatttgataagggataatgcacaatat 40103559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 394
Target Start/End: Original strand, 41430886 - 41430914
Alignment:
Q  366 ccacttattcatctttaaggtgaatttct 394  Q
    |||||||||||||||||||||||||||||    
T  41430886 ccacttattcatctttaaggtgaatttct 41430914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 419708 - 419815
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||||||  |||  ||||||  ||||||| |||||||||||||||||||||||||||    
T  419708 cccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 419807  T
Q  392 tctctagc 399  Q
    ||||||||    
T  419808 tctctagc 419815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 6e-29; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 18424248 - 18424144
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||||||||||||||||||||    ||||||||||||||||||||  |||  |||||| ||||||||||||||||||||||||||||||||||||    
T  18424248 cccatgagcttagctcatttggtaagg---aatgcacaatatgtgcaggggccggggttcgaactccggacatcccacttattcatctttaaggtgaatt 18424152  T
Q  392 tctctagc 399  Q
    ||||||||    
T  18424151 tctctagc 18424144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 3330293 - 3330195
Alignment:
Q  299 gcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||| ||||||| ||||| ||||||||||||||||||||| | ||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  3330293 gcttaactcatttagtaagggataatgcacaatatgtgcagaggtcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctcta 3330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 34107496 - 34107597
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || |  ||| ||  ||||||| ||||||||||||||||||||||||||||||||    
T  34107496 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcagggttc-aaacccggacaccccacttattcatctttaaggtgaatttctct 34107594  T
Q  397 agc 399  Q
    |||    
T  34107595 agc 34107597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 6866510 - 6866611
Alignment:
Q  298 agcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||| ||||||||||||| |||||||||||||||||||||| | |||| ||||||| ||||||| | |||||||| ||||||||||||||||||| ||    
T  6866510 agcttaactcatttggtaagggataatgcacaatatgtgcaggaaccggagttcgaatcccggacacctcacttatttatctttaaggtgaatttcttta 6866609  T
Q  398 gc 399  Q
    ||    
T  6866610 gc 6866611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 42678426 - 42678318
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| ||| ||| || | |||||||| |||||||||||||||| | |||||||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  42678426 gttcccatgagtttaacttacttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccggacaccccacttattcatctttaaggtga 42678327  T
Q  389 atttctcta 397  Q
    |||||||||    
T  42678326 atttctcta 42678318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 33065351 - 33065249
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||| ||||  |||||| |||| ||| || |||||||||||||||||||||||||||||    
T  33065351 gagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttctct 33065252  T
Q  397 agc 399  Q
    |||    
T  33065251 agc 33065249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 17543173 - 17543084
Alignment:
Q  308 atttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||| |||||||||||||||||||||||  |||| ||||||  ||||||| ||||||||||||||||||| |||| ||||||||    
T  17543173 atttggtaagggataatgcacaatatgtgcaggggccggagttcgaacgccggacaccccacttattcatctttaatgtgactttctcta 17543084  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 41749943 - 41750049
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| ||||| ||||||||||| ||| ||||||||||||| |||| |||| ||||  || |||  ||||||| |||||||||||||||||||||||||||    
T  41749943 cccatgagctaagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggtttgaaccccggaca-cccacttattcatctttaaggtgaatt 41750041  T
Q  392 tctctagc 399  Q
    ||||||||    
T  41750042 tctctagc 41750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 403
Target Start/End: Complemental strand, 19843457 - 19843351
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    ||||||| ||||||| ||||| ||| ||| ||||||||||||||| || |  ||||||  |  |||| | ||||||||||||||||||||||||||||||    
T  19843457 gagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctagacacctcacttattcatctttaaggtgaatttctct 19843358  T
Q  397 agctact 403  Q
    |||||||    
T  19843357 agctact 19843351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 31149200 - 31149096
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||| | |   ||||||  || |||| ||||||| || ||||||||||||||||    
T  31149200 cccatgagcatagctcatttggtaagggataatgcacaatatgtgcaggg-ttgaggttcgaaccccagacaccccactttttaatctttaaggtgaatt 31149102  T
Q  392 tctcta 397  Q
    ||||||    
T  31149101 tctcta 31149096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 25553250 - 25553140
Alignment:
Q  286 ctagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaagg 385  Q
    ||||| |||| |||||||  |||||||||||| ||||||||||||||||||||| ||| ||  |||||| | | || |  |||||||||||||||||||     
T  25553250 ctagtccccatgagcttaattcatttggtaagggataatgcacaatatgtgcagagattggggttcgaact-cagatactccacttattcatctttaaga 25553152  T
Q  386 tgaatttctcta 397  Q
    ||||||||||||    
T  25553151 tgaatttctcta 25553140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 397
Target Start/End: Complemental strand, 33482754 - 33482636
Alignment:
Q  279 attttcactagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatc 378  Q
    ||||| |||| | |||| || ||||||||||||||||||  || ||||||||||| |||||||| ||   ||||||   | |||| ||||||||||||||    
T  33482754 atttttactaatccccatgaacttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatc 33482655  T
Q  379 tttaaggtgaatttctcta 397  Q
    |||||| ||||||||||||    
T  33482654 tttaagatgaatttctcta 33482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 16403526 - 16403570
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcaggg 341  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  16403526 gagcttagctcatttggtaagggataatgcacaatatgtgcaggg 16403570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 20435782 - 20435882
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||| |||||||| |||| |||| | | | |||| ||  |||  ||||||   |||||||||||||||||||||||||||||||||||||||    
T  20435782 gagcttagctcacttggtaagggatattgcatattttatgcaaggcccggggttcgaacctcggacatcccacttattcatctttaaggtgaatttctct 20435881  T
Q  397 a 397  Q
    |    
T  20435882 a 20435882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 397
Target Start/End: Complemental strand, 27463620 - 27463521
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||||||||  |||||||||||||| ||||||   |||  ||||||  || || | ||||||||||||||||||| ||||||||||||    
T  27463620 gagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaa-cccagataacccacttattcatctttaaagtgaatttctct 27463522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 11069439 - 11069341
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||||||||  |||||||||||||||||||||| | ||  ||||||  | ||||| ||    || ||||||||||| |||||||||||    
T  11069439 gagcttagctcatttggtaaggaataatgcacaatatgtgcagggtttggggttcgaaccctggacaccc----tactcatctttaagatgaatttctct 11069344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 403
Target Start/End: Complemental strand, 33613682 - 33613593
Alignment:
Q  314 taagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagctact 403  Q
    |||| ||||||||| | ||| |||  || ||||| ||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  33613682 taagggataatgcatattatatgcgagggtcggagttcgaaccccggacaccccacttattcacctttaagttgaatttctctagctact 33613593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 35710201 - 35710165
Alignment:
Q  361 acatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||||||||||||||||||||||||||||||||    
T  35710201 acatcccacttattcatctttaaggtgaatttctcta 35710165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 43027151 - 43027258
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcgga-cttcgaattccggacatcccacttattcatctttaaggtgaat 390  Q
    |||| |||||||||||||||| |||| ||||||||||||| ||||| |||  | ||  ||||||  || |||| |||| ||||||| |||||||||||||    
T  43027151 cccatgagcttagctcatttgataagggataatgcacaatttgtgc-gggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtgaat 43027249  T
Q  391 ttctctagc 399  Q
    |||||||||    
T  43027250 ttctctagc 43027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 1962830 - 1962921
Alignment:
Q  300 cttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatt 391  Q
    |||| |||| |||||||  ||||||||| | | | ||||||| |||   |||||| |||||||| |||||||||||||||||||||||||||    
T  1962830 cttaactcacttggtaaaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattcatctttaaggtgaatt 1962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 6270484 - 6270534
Alignment:
Q  349 ttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||| |||| | |||||||| ||||||||||||||||||||||||    
T  6270484 ttcgaattccagacacctcacttatttatctttaaggtgaatttctctagc 6270534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 18949786 - 18949677
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||| ||||||| |||||||| |||  |||||||||  |||||||||||| ||||  ||||||  | | ||| || |||||||||| ||||| ||||    
T  18949786 gttcccatgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccctgaacacccaacttattcat-tttaatgtga 18949688  T
Q  389 atttctctagc 399  Q
    |||||||||||    
T  18949687 atttctctagc 18949677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 24202151 - 24202249
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    |||||||||||| |||||||| |||||||||  || | |||||||  |||  ||||||  ||||||| ||||||  |||| ||||||||||||||||||    
T  24202151 gagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttctc 24202249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 29090417 - 29090514
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    ||||||||||||| || |||| |||||||||   ||| | |||||  |||| ||||||  ||||||| | |||||||||||||||||||||||||||||    
T  29090417 gagcttagctcatatgataagggataatgcatt-tatatacaggggccggagttcgaaccccggacacctcacttattcatctttaaggtgaatttctc 29090514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 399
Target Start/End: Complemental strand, 5901915 - 5901823
Alignment:
Q  307 catttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctctagc 399  Q
    |||| |||||| ||||||||||||| | |||||||  |||  | | ||  ||||||| |||||||||||||||| ||||||||||||| ||||    
T  5901915 cattaggtaagggataatgcacaatttctgcaggggccggggtacaaaccccggacaccccacttattcatcttaaaggtgaatttctttagc 5901823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 17269913 - 17270015
Alignment:
Q  297 gagcttagctcatttggtaagaga-taatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctc 395  Q
    ||||||||||||||||||| |||| ||||||||||| | || |||| ||||  ||||||  | | ||| || ||||||||||| | ||||||||||||||    
T  17269913 gagcttagctcatttggta-gagaataatgcacaatttatgtaggggtcgggattcgaacgctgaacacccaacttattcatcataaaggtgaatttctc 17270011  T
Q  396 tagc 399  Q
    ||||    
T  17270012 tagc 17270015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 397
Target Start/End: Original strand, 20375663 - 20375694
Alignment:
Q  366 ccacttattcatctttaaggtgaatttctcta 397  Q
    ||||||||||||||||||||||||||||||||    
T  20375663 ccacttattcatctttaaggtgaatttctcta 20375694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 28926137 - 28926074
Alignment:
Q  88 aaaaactaggttatgaattggggttagggattgcttgaccagacaagctttagaaagaaagata 151  Q
    ||||| ||||||| ||||| ||||||   || ||||||||||||||||||||| ||||||||||    
T  28926137 aaaaattaggttaagaattagggttactaatagcttgaccagacaagctttagtaagaaagata 28926074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 25783307 - 25783206
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||| ||||| || ||||||||| | ||| ||||||| |  |  ||||||  | ||||| |||||||||||||||| |||||||| ||||||    
T  25783307 gagcttagctcacttggtgagggataatgcata-tatatgcaggggttagggttcgaaccctggacaccccacttattcatcttcaaggtgaagttctct 25783209  T
Q  397 agc 399  Q
    |||    
T  25783208 agc 25783206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 34235777 - 34235885
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcc-cacttattcatctttaaggtg 387  Q
    |||||||||||||||||||||||  |||  ||||||||| || ||||||| || ||| | |||||| |||  ||| || ||||||||||| |||||| ||    
T  34235777 gttcccacgagcttagctcattt-ataatggataatgcataaaatgtgcaagggtcgaagttcgaactccaaacaccctcacttattcat-tttaagatg 34235874  T
Q  388 aatttctctag 398  Q
    |||||||||||    
T  34235875 aatttctctag 34235885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 37886257 - 37886219
Alignment:
Q  359 ggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  37886257 ggacaccccacttattcacctttaaggtgaatttctcta 37886219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 43684270 - 43684402
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    |||| |||| ||||||||||||||||||||| |||||||||   | | |||||||   |   ||||||  ||| ||| |||||||||||| |||||||||    
T  43684270 tagtccccatgagcttagctcatttggtaagggataatgca-tttgtatgcaggggctgaggttcgaaccccgaacaccccacttattcacctttaaggt 43684368  T
Q  387 gaatttct-cta-gctacttgacaaaacaaaaat 418  Q
    |||||||| ||| |||| ||||||||| ||||||    
T  43684369 gaatttctcctaggctatttgacaaaaaaaaaat 43684402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 12183839 - 12183731
Alignment:
Q  287 tagttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggt 386  Q
    |||| |||| || |||| |||| ||||||||  ||||||||  || | ||||||| ||||  |||||| ||| |||||||||||  || | |||||||||    
T  12183839 tagtccccatgaacttacctcacttggtaaggaataatgcattatgtatgcaggggtcgggattcgaactccagacatcccactattttacctttaaggt 12183740  T
Q  387 gaatttctc 395  Q
    |||||||||    
T  12183739 gaatttctc 12183731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 146766 - 146875
Alignment:
Q  289 gttcccacgagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtga 388  Q
    ||||||||||||||| ||||||| || || || |||||||||||||||||||||| ||| || |||  |  |||| ||||| | |||||||| |||||||    
T  146766 gttcccacgagcttaactcatttagtgagggacaatgcacaatatgtgcagggattggagtttgaaccctagaca-cccacctgttcatcttaaaggtga 146864  T
Q  389 atttctctagc 399  Q
    |||||||||||    
T  146865 atttctctagc 146875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 10577 - 10678
Alignment:
Q  297 gagcttagctcatttggtaagagataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctct 396  Q
    |||||||||||||||| |||| ||||||||||||||  || ||||  |||| |||||| | | |||| | ||||||| ||||||||| ||||||||||||    
T  10577 gagcttagctcatttgataagggataatgcacaataaatgtaggg-gcggagttcgaacttcagacacctcacttatccatctttaaagtgaatttctct 10675  T
Q  397 agc 399  Q
    |||    
T  10676 agc 10678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 121898 - 121848
Alignment:
Q  292 cccacgagcttagctcatttggtaagagataatgcacaatatgtgcaggga 342  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  121898 cccatgagcttagctcatttggtaggggataatgcacaatatgtgcaggga 121848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 17804 - 17727
Alignment:
Q  320 ataatgcacaatatgtgcagggatcggacttcgaattccggacatcccacttattcatctttaaggtgaatttctcta 397  Q
    |||||||| ||||| ||||||||| ||| ||||||   | |||| | ||||||||||| |||||||||||||||||||    
T  17804 ataatgcataatatatgcagggattggagttcgaacctcagacacctcacttattcatttttaaggtgaatttctcta 17727  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 63893 - 63856
Alignment:
Q  361 acatcccacttattcat-ctttaaggtgaatttctcta 397  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  63893 acatcccacttattcattctttaaggtgaatttctcta 63856  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 399
Target Start/End: Complemental strand, 12686 - 12654
Alignment:
Q  367 cacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||||||| ||||||    
T  12686 cacttattcatctttaaggtgaatttttctagc 12654  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 399
Target Start/End: Complemental strand, 18370 - 18338
Alignment:
Q  367 cacttattcatctttaaggtgaatttctctagc 399  Q
    |||||||||||||||||||||||||| ||||||    
T  18370 cacttattcatctttaaggtgaatttttctagc 18338  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 392
Target Start/End: Original strand, 22523 - 22555
Alignment:
Q  360 gacatcccacttattcatctttaaggtgaattt 392  Q
    |||||||||||||||||| ||||||||||||||    
T  22523 gacatcccacttattcatttttaaggtgaattt 22555  T

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