View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11624_low_28 (Length: 240)

Name: NF11624_low_28
Description: NF11624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11624_low_28
NF11624_low_28
[»] chr5 (32 HSPs)
chr5 (1-217)||(41997270-41997486)
chr5 (1-217)||(42002039-42002255)
chr5 (1-217)||(36936783-36936999)
chr5 (1-217)||(36941537-36941753)
chr5 (1-217)||(32460816-32461032)
chr5 (1-217)||(557302-557517)
chr5 (1-217)||(562074-562289)
chr5 (6-212)||(23976863-23977070)
chr5 (1-217)||(31732143-31732357)
chr5 (1-217)||(13300763-13300978)
chr5 (1-217)||(12044404-12044623)
chr5 (1-186)||(36949391-36949575)
chr5 (1-217)||(21826829-21827037)
chr5 (1-212)||(26869601-26869802)
chr5 (2-137)||(21323328-21323463)
chr5 (1-212)||(8770849-8771060)
chr5 (1-184)||(3666521-3666702)
chr5 (1-203)||(24435470-24435671)
chr5 (1-109)||(10754056-10754164)
chr5 (90-217)||(1429448-1429574)
chr5 (35-187)||(15395139-15395294)
chr5 (35-206)||(41099170-41099331)
chr5 (169-217)||(21323292-21323340)
chr5 (152-212)||(41099407-41099467)
chr5 (142-205)||(10755486-10755549)
chr5 (152-207)||(26869474-26869529)
chr5 (152-212)||(21827082-21827142)
chr5 (1-33)||(26667909-26667941)
chr5 (1-33)||(26939506-26939538)
chr5 (1-33)||(29167405-29167437)
chr5 (1-31)||(6154867-6154897)
chr5 (1-33)||(7452384-7452416)
[»] chr3 (63 HSPs)
chr3 (1-217)||(3034249-3034465)
chr3 (1-217)||(8888536-8888752)
chr3 (2-217)||(8070286-8070501)
chr3 (1-217)||(3693224-3693441)
chr3 (1-217)||(8883776-8883992)
chr3 (1-217)||(3673192-3673409)
chr3 (1-217)||(45903817-45904033)
chr3 (1-217)||(10585464-10585678)
chr3 (6-217)||(22758453-22758663)
chr3 (1-205)||(16749205-16749408)
chr3 (1-205)||(19776491-19776694)
chr3 (1-186)||(6595697-6595881)
chr3 (35-217)||(12899021-12899197)
chr3 (1-212)||(14425130-14425331)
chr3 (1-185)||(9706896-9707079)
chr3 (1-205)||(37438845-37439048)
chr3 (1-212)||(8223541-8223742)
chr3 (1-212)||(18350062-18350263)
chr3 (1-212)||(29834-30035)
chr3 (1-205)||(4106620-4106814)
chr3 (1-205)||(4110472-4110666)
chr3 (1-185)||(8488696-8488878)
chr3 (1-205)||(15965661-15965855)
chr3 (1-205)||(15969585-15969779)
chr3 (1-205)||(15973509-15973703)
chr3 (1-212)||(8197058-8197259)
chr3 (54-205)||(16023191-16023342)
chr3 (1-217)||(53358708-53358927)
chr3 (1-209)||(16055782-16055989)
chr3 (5-213)||(51922944-51923142)
chr3 (1-209)||(16043108-16043314)
chr3 (5-209)||(16048603-16048807)
chr3 (23-186)||(429057-429220)
chr3 (153-217)||(18699130-18699194)
chr3 (152-217)||(14424991-14425058)
chr3 (1-65)||(18699202-18699266)
chr3 (82-205)||(14679958-14680080)
chr3 (27-109)||(35456320-35456401)
chr3 (151-212)||(8197328-8197389)
chr3 (102-183)||(19340208-19340289)
chr3 (152-212)||(8223812-8223872)
chr3 (152-212)||(18349932-18349992)
chr3 (23-110)||(47540898-47540985)
chr3 (107-186)||(53502439-53502518)
chr3 (103-184)||(47541213-47541294)
chr3 (152-212)||(30105-30165)
chr3 (23-109)||(11997387-11997472)
chr3 (1-50)||(14671999-14672048)
chr3 (106-186)||(11997288-11997367)
chr3 (103-185)||(47540795-47540878)
chr3 (92-179)||(18012065-18012152)
chr3 (35-183)||(20497784-20497931)
chr3 (56-109)||(49020114-49020167)
chr3 (1-33)||(14438132-14438164)
chr3 (1-33)||(18467843-18467875)
chr3 (1-33)||(32473456-32473488)
chr3 (1-33)||(39775160-39775192)
chr3 (103-186)||(35456221-35456303)
chr3 (131-217)||(18349905-18349991)
chr3 (45-98)||(18011990-18012043)
chr3 (1-33)||(18472637-18472669)
chr3 (105-161)||(35458090-35458146)
chr3 (85-181)||(55203920-55204015)
[»] chr8 (33 HSPs)
chr8 (1-217)||(4237613-4237829)
chr8 (1-217)||(4242352-4242568)
chr8 (1-217)||(31449137-31449353)
chr8 (1-217)||(8330635-8330851)
chr8 (4-217)||(43301958-43302169)
chr8 (1-217)||(34817978-34818194)
chr8 (1-217)||(25367259-25367474)
chr8 (1-217)||(37772313-37772526)
chr8 (1-217)||(23915098-23915313)
chr8 (1-205)||(21384350-21384552)
chr8 (1-205)||(21387770-21387972)
chr8 (1-205)||(21411629-21411832)
chr8 (1-205)||(21806121-21806324)
chr8 (1-212)||(19393018-19393219)
chr8 (1-212)||(22104281-22104482)
chr8 (1-201)||(4582593-4582784)
chr8 (1-205)||(18861864-18862058)
chr8 (2-212)||(16066504-16066704)
chr8 (59-186)||(10933904-10934031)
chr8 (55-178)||(17153198-17153320)
chr8 (1-185)||(21827253-21827427)
chr8 (55-211)||(17157333-17157486)
chr8 (2-217)||(25733455-25733652)
chr8 (23-111)||(14036083-14036171)
chr8 (152-212)||(22104554-22104614)
chr8 (92-160)||(14036186-14036254)
chr8 (152-212)||(19392886-19392946)
chr8 (71-186)||(29220759-29220871)
chr8 (103-162)||(42972847-42972905)
chr8 (131-217)||(22104555-22104641)
chr8 (51-111)||(2839890-2839949)
chr8 (51-111)||(2844577-2844636)
chr8 (28-100)||(42972749-42972821)
[»] chr7 (73 HSPs)
chr7 (1-217)||(9650232-9650448)
chr7 (1-217)||(27256843-27257059)
chr7 (1-216)||(8076656-8076872)
chr7 (1-216)||(47102145-47102350)
chr7 (1-183)||(40864669-40864851)
chr7 (1-217)||(14927909-14928124)
chr7 (1-217)||(15351375-15351590)
chr7 (1-217)||(19640905-19641121)
chr7 (1-217)||(16459654-16459869)
chr7 (1-205)||(20488554-20488757)
chr7 (1-217)||(16580835-16581050)
chr7 (1-205)||(18426533-18426736)
chr7 (1-205)||(20485193-20485396)
chr7 (1-217)||(32302445-32302659)
chr7 (1-217)||(14259612-14259818)
chr7 (6-212)||(8954554-8954750)
chr7 (1-212)||(19096860-19097062)
chr7 (1-185)||(45169236-45169419)
chr7 (1-212)||(29727079-29727292)
chr7 (28-184)||(10488602-10488759)
chr7 (27-137)||(9008789-9008899)
chr7 (1-212)||(36477583-36477777)
chr7 (1-217)||(845890-846096)
chr7 (1-217)||(853267-853473)
chr7 (1-217)||(1211271-1211477)
chr7 (13-185)||(11017387-11017557)
chr7 (1-111)||(838810-838920)
chr7 (1-111)||(1203990-1204100)
chr7 (45-193)||(11247695-11247841)
chr7 (23-177)||(11297381-11297534)
chr7 (23-161)||(1043847-1043985)
chr7 (27-186)||(10499401-10499566)
chr7 (27-186)||(10504430-10504595)
chr7 (30-186)||(15565549-15565705)
chr7 (92-181)||(7838780-7838868)
chr7 (127-204)||(7838858-7838935)
chr7 (152-217)||(853155-853222)
chr7 (152-217)||(1211159-1211226)
chr7 (152-212)||(19097134-19097194)
chr7 (27-100)||(10532222-10532295)
chr7 (77-186)||(44784029-44784136)
chr7 (152-203)||(838638-838689)
chr7 (152-203)||(845794-845845)
chr7 (152-203)||(1203818-1203869)
chr7 (163-217)||(9008903-9008957)
chr7 (92-186)||(10532114-10532207)
chr7 (92-186)||(13343710-13343803)
chr7 (165-217)||(838734-838788)
chr7 (165-217)||(1203914-1203968)
chr7 (29-140)||(2629290-2629401)
chr7 (122-192)||(11289348-11289418)
chr7 (27-109)||(13343809-13343891)
chr7 (30-119)||(15566012-15566099)
chr7 (142-199)||(11288914-11288971)
chr7 (142-199)||(11296715-11296772)
chr7 (118-186)||(1043985-1044053)
chr7 (51-111)||(18385144-18385204)
chr7 (142-201)||(11266284-11266343)
chr7 (151-189)||(11247285-11247323)
chr7 (92-142)||(47552626-47552676)
chr7 (94-167)||(13337445-13337518)
chr7 (153-217)||(40998159-40998224)
chr7 (1-33)||(26341838-26341870)
chr7 (122-193)||(11265837-11265908)
chr7 (152-186)||(18385247-18385281)
chr7 (132-186)||(47342355-47342409)
chr7 (153-186)||(11017354-11017387)
chr7 (131-184)||(11289292-11289345)
chr7 (94-171)||(13345350-13345427)
chr7 (152-184)||(11247350-11247382)
chr7 (152-204)||(11266218-11266269)
chr7 (152-204)||(11296789-11296840)
chr7 (124-183)||(39049872-39049931)
[»] chr4 (47 HSPs)
chr4 (1-217)||(13521257-13521473)
chr4 (1-217)||(34561030-34561246)
chr4 (7-217)||(31297766-31297977)
chr4 (1-217)||(41817388-41817617)
chr4 (1-217)||(7902385-7902599)
chr4 (1-217)||(15011089-15011304)
chr4 (9-196)||(47575276-47575463)
chr4 (1-217)||(3997339-3997550)
chr4 (1-217)||(15225771-15225977)
chr4 (1-205)||(10713546-10713749)
chr4 (1-205)||(10927316-10927519)
chr4 (1-205)||(12488404-12488607)
chr4 (1-212)||(9184971-9185172)
chr4 (1-213)||(9190835-9191037)
chr4 (1-205)||(14953349-14953543)
chr4 (1-167)||(8660726-8660891)
chr4 (21-217)||(39320188-39320383)
chr4 (1-205)||(25690600-25690794)
chr4 (1-212)||(14868355-14868556)
chr4 (1-212)||(14898903-14899104)
chr4 (1-212)||(14877378-14877579)
chr4 (35-207)||(26034828-26034990)
chr4 (29-186)||(52742527-52742684)
chr4 (71-186)||(3309922-3310035)
chr4 (152-217)||(14891478-14891545)
chr4 (152-217)||(14898520-14898587)
chr4 (152-217)||(14898764-14898831)
chr4 (51-206)||(1150640-1150797)
chr4 (152-212)||(14868091-14868151)
chr4 (152-212)||(14898415-14898475)
chr4 (152-212)||(14898659-14898719)
chr4 (151-212)||(14868223-14868284)
chr4 (1-50)||(18023227-18023276)
chr4 (103-186)||(43477298-43477379)
chr4 (28-110)||(26188047-26188129)
chr4 (151-192)||(12383577-12383618)
chr4 (23-120)||(55073774-55073871)
chr4 (1-33)||(5270856-5270888)
chr4 (131-217)||(14868064-14868150)
chr4 (131-217)||(14868196-14868282)
chr4 (131-217)||(14898632-14898718)
chr4 (45-91)||(32545533-32545579)
chr4 (102-160)||(32545607-32545665)
chr4 (154-212)||(12488535-12488594)
chr4 (92-173)||(26187959-26188039)
chr4 (1-33)||(5927650-5927682)
chr4 (54-98)||(43477408-43477452)
[»] chr1 (40 HSPs)
chr1 (1-217)||(3094695-3094911)
chr1 (1-217)||(41097232-41097446)
chr1 (2-217)||(40232665-40232875)
chr1 (4-222)||(17213711-17213929)
chr1 (1-217)||(19725179-19725392)
chr1 (2-217)||(19726973-19727186)
chr1 (1-205)||(39243308-39243511)
chr1 (1-205)||(39246863-39247066)
chr1 (49-204)||(8267138-8267292)
chr1 (1-186)||(13893922-13894105)
chr1 (9-205)||(41387260-41387455)
chr1 (1-217)||(26198964-26199172)
chr1 (1-212)||(16836572-16836774)
chr1 (1-206)||(21498257-21498452)
chr1 (1-212)||(14804110-14804311)
chr1 (1-212)||(22428483-22428683)
chr1 (10-212)||(14819587-14819779)
chr1 (1-205)||(1924348-1924542)
chr1 (1-205)||(20923362-20923556)
chr1 (28-213)||(23285116-23285300)
chr1 (1-161)||(1067087-1067246)
chr1 (1-212)||(2367649-2367850)
chr1 (1-212)||(2384533-2384734)
chr1 (35-184)||(27308194-27308342)
chr1 (1-212)||(52100514-52100709)
chr1 (1-82)||(33055642-33055723)
chr1 (131-217)||(39036963-39037049)
chr1 (28-161)||(23254515-23254648)
chr1 (152-212)||(21498528-21498588)
chr1 (152-212)||(52100384-52100444)
chr1 (131-212)||(26199218-26199299)
chr1 (1-73)||(26319589-26319661)
chr1 (152-206)||(26199217-26199273)
chr1 (127-209)||(26319505-26319586)
chr1 (1-33)||(10135956-10135988)
chr1 (1-49)||(18783993-18784041)
chr1 (1-33)||(26927153-26927185)
chr1 (131-217)||(21498529-21498615)
chr1 (127-217)||(26199236-26199326)
chr1 (131-217)||(52100357-52100443)
[»] chr2 (36 HSPs)
chr2 (1-217)||(10159991-10160208)
chr2 (4-217)||(28855740-28855951)
chr2 (1-217)||(6297166-6297380)
chr2 (6-203)||(30658788-30658979)
chr2 (5-199)||(25375499-25375692)
chr2 (1-217)||(9785756-9785969)
chr2 (1-182)||(22845008-22845188)
chr2 (1-212)||(7559628-7559839)
chr2 (1-205)||(1284120-1284323)
chr2 (27-217)||(17452859-17453053)
chr2 (1-217)||(26897233-26897441)
chr2 (1-205)||(30344210-30344404)
chr2 (5-212)||(34070029-34070226)
chr2 (1-142)||(23068100-23068241)
chr2 (1-201)||(24292760-24292950)
chr2 (1-212)||(6856803-6857004)
chr2 (1-201)||(24286192-24286382)
chr2 (1-217)||(42248833-42249042)
chr2 (1-212)||(377577-377778)
chr2 (24-182)||(13290872-13291029)
chr2 (23-145)||(30641455-30641577)
chr2 (1-109)||(30635399-30635510)
chr2 (23-186)||(30640297-30640460)
chr2 (152-212)||(26903011-26903071)
chr2 (152-212)||(34070296-34070356)
chr2 (152-212)||(42249085-42249145)
chr2 (43-108)||(17327708-17327773)
chr2 (152-201)||(26897484-26897533)
chr2 (152-212)||(6857074-6857134)
chr2 (152-213)||(24286048-24286111)
chr2 (47-178)||(38426831-38426962)
chr2 (103-186)||(19589006-19589088)
chr2 (1-33)||(18345042-18345074)
chr2 (1-31)||(17968397-17968427)
chr2 (131-217)||(34070297-34070383)
chr2 (164-217)||(6857106-6857161)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-217)||(34976-35192)
[»] scaffold0020 (1 HSPs)
scaffold0020 (2-217)||(513-727)
[»] scaffold0070 (2 HSPs)
scaffold0070 (1-217)||(59032-59247)
scaffold0070 (51-217)||(63284-63449)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-217)||(9154-9368)
[»] chr6 (37 HSPs)
chr6 (1-217)||(6112035-6112247)
chr6 (1-217)||(15704184-15704399)
chr6 (1-212)||(16625022-16625223)
chr6 (1-217)||(2077418-2077633)
chr6 (1-205)||(22806957-22807160)
chr6 (1-205)||(27324346-27324547)
chr6 (1-205)||(16760988-16761192)
chr6 (1-217)||(26981201-26981409)
chr6 (1-205)||(22949838-22950032)
chr6 (1-205)||(22953794-22953988)
chr6 (1-205)||(23872282-23872476)
chr6 (1-205)||(23876238-23876432)
chr6 (1-125)||(19772376-19772500)
chr6 (4-100)||(24588567-24588663)
chr6 (7-185)||(31477011-31477186)
chr6 (23-184)||(2862779-2862938)
chr6 (1-207)||(14073741-14073937)
chr6 (79-177)||(28964135-28964233)
chr6 (54-205)||(14322695-14322845)
chr6 (23-184)||(2882082-2882241)
chr6 (1-111)||(27073591-27073701)
chr6 (103-186)||(2759470-2759552)
chr6 (152-217)||(16625295-16625360)
chr6 (152-217)||(27073836-27073903)
chr6 (1-110)||(18387538-18387647)
chr6 (152-217)||(26981454-26981521)
chr6 (27-109)||(15991075-15991157)
chr6 (23-184)||(15640938-15641090)
chr6 (103-186)||(2759657-2759739)
chr6 (154-205)||(31477011-31477061)
chr6 (121-183)||(15645417-15645479)
chr6 (170-217)||(27073742-27073791)
chr6 (176-217)||(19772328-19772369)
chr6 (45-109)||(2759756-2759820)
chr6 (1-33)||(17963991-17964023)
chr6 (103-186)||(15990977-15991058)
chr6 (92-145)||(9751101-9751154)
[»] scaffold0060 (2 HSPs)
scaffold0060 (1-217)||(47247-47461)
scaffold0060 (1-217)||(52191-52405)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-209)||(49265-49472)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-209)||(149162-149369)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-217)||(127009-127224)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-217)||(21913-22128)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-217)||(6994-7209)
[»] scaffold0575 (2 HSPs)
scaffold0575 (1-217)||(5154-5369)
scaffold0575 (69-217)||(2046-2193)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-205)||(14762-14965)
[»] scaffold0019 (2 HSPs)
scaffold0019 (4-212)||(30293-30491)
scaffold0019 (152-217)||(24247-24312)
[»] scaffold0144 (1 HSPs)
scaffold0144 (1-205)||(7483-7686)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-217)||(7773-7988)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-205)||(10711-10914)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-212)||(24583-24784)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-205)||(31870-32073)
scaffold0157 (154-212)||(31883-31942)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-205)||(13297-13500)
[»] scaffold0327 (4 HSPs)
scaffold0327 (1-212)||(19509-19710)
scaffold0327 (152-212)||(8886-8946)
scaffold0327 (152-188)||(19401-19437)
scaffold0327 (131-217)||(8859-8945)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-205)||(21272-21474)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-205)||(35297-35499)
[»] scaffold0015 (14 HSPs)
scaffold0015 (1-212)||(193554-193755)
scaffold0015 (1-217)||(187862-188069)
scaffold0015 (152-212)||(192904-192964)
scaffold0015 (152-212)||(193034-193094)
scaffold0015 (152-212)||(193164-193224)
scaffold0015 (152-212)||(193294-193354)
scaffold0015 (152-212)||(193424-193484)
scaffold0015 (152-212)||(187759-187819)
scaffold0015 (131-217)||(187732-187818)
scaffold0015 (131-217)||(192877-192963)
scaffold0015 (131-217)||(193007-193093)
scaffold0015 (131-217)||(193137-193223)
scaffold0015 (131-217)||(193397-193483)
scaffold0015 (131-216)||(193268-193353)
[»] scaffold1910 (1 HSPs)
scaffold1910 (1-217)||(472-678)
[»] scaffold0572 (1 HSPs)
scaffold0572 (1-185)||(10281-10464)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-212)||(3634-3835)
[»] scaffold0044 (7 HSPs)
scaffold0044 (1-203)||(81164-81356)
scaffold0044 (1-212)||(64766-64967)
scaffold0044 (152-212)||(65037-65097)
scaffold0044 (152-212)||(65167-65227)
scaffold0044 (153-212)||(81416-81475)
scaffold0044 (131-217)||(65168-65254)
scaffold0044 (131-217)||(81416-81502)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-142)||(121175-121313)
[»] scaffold0415 (1 HSPs)
scaffold0415 (1-205)||(1094-1289)
[»] scaffold0452 (1 HSPs)
scaffold0452 (1-125)||(12332-12456)
[»] scaffold0009 (2 HSPs)
scaffold0009 (2-109)||(71738-71846)
scaffold0009 (103-184)||(71863-71943)
[»] scaffold0205 (2 HSPs)
scaffold0205 (4-111)||(30876-30983)
scaffold0205 (152-217)||(26819-26884)
[»] scaffold0035 (1 HSPs)
scaffold0035 (52-217)||(6790-6954)
[»] scaffold0478 (2 HSPs)
scaffold0478 (23-178)||(8215-8369)
scaffold0478 (77-211)||(2891-3022)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-212)||(199798-199997)
[»] scaffold0045 (1 HSPs)
scaffold0045 (143-217)||(83670-83744)
[»] scaffold0720 (1 HSPs)
scaffold0720 (23-145)||(5895-6017)
[»] scaffold0008 (2 HSPs)
scaffold0008 (27-109)||(256444-256526)
scaffold0008 (105-186)||(256545-256625)
[»] scaffold0863 (2 HSPs)
scaffold0863 (152-212)||(1-61)
scaffold0863 (131-217)||(2-88)
[»] scaffold0232 (3 HSPs)
scaffold0232 (153-217)||(22649-22713)
scaffold0232 (28-89)||(22583-22644)
scaffold0232 (1-33)||(11800-11832)
[»] scaffold0096 (1 HSPs)
scaffold0096 (11-58)||(22325-22372)
[»] scaffold0932 (1 HSPs)
scaffold0932 (23-108)||(1020-1105)
[»] scaffold0777 (1 HSPs)
scaffold0777 (23-140)||(3811-3924)
[»] scaffold0155 (2 HSPs)
scaffold0155 (1-57)||(22281-22337)
scaffold0155 (153-181)||(22400-22428)
[»] scaffold0131 (1 HSPs)
scaffold0131 (87-149)||(8372-8434)
[»] scaffold0211 (1 HSPs)
scaffold0211 (104-204)||(23069-23166)


Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 41997270 - 41997486
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41997270 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 41997369  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41997370 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacataaata 41997469  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  41997470 tattactgagtatcaaa 41997486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 42002039 - 42002255
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42002039 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 42002138  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42002139 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacataaata 42002238  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  42002239 tattactgagtatcaaa 42002255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 36936999 - 36936783
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36936999 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 36936900  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  36936899 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 36936800  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  36936799 tattactgagtatcaaa 36936783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 36941753 - 36941537
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36941753 cacaggaagcatcaactgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 36941654  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  36941653 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 36941554  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  36941553 tattactgagtatcaaa 36941537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 32461032 - 32460816
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32461032 cacaggaagcatcaactgtgaatttcggtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttagga 32460933  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  32460932 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagaacaaaaatatattattcaatacagaaata 32460833  T
Q  201 tattattgagtatcaaa 217  Q
     ||||||||||||||||    
T  32460832 aattattgagtatcaaa 32460816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 557302 - 557517
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  557302 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 557401  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  557402 gc-agtgattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagcacataaata 557500  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  557501 tattactgagtatcaaa 557517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 562074 - 562289
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  562074 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtaagaaactttggga 562173  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  562174 gc-agtgattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtaccaaaatatattattcagcacataaata 562272  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  562273 tattactgagtatcaaa 562289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 23977070 - 23976863
Alignment:
Q  6 gaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaag 105  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  23977070 gaagcatcaactgtgaatttcagtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaataagtgagaaactttgggagcaag 23976971  T
Q  106 taattctcatattagatctaatacaaaaatatc-tcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  23976970 taattctcatattagatctagtacaaaaatatcttcaaattgagtatcaaaatatatcatattgagtacaaaaatatattattcaatacatgaatatatt 23976871  T
Q  205 attgagta 212  Q
    ||||||||    
T  23976870 attgagta 23976863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 31732143 - 31732357
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31732143 cacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 31732242  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  31732243 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 31732340  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  31732341 tattattgactatcaaa 31732357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13300978 - 13300763
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13300978 cacatgaagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 13300879  T
Q  101 gcaagtaattctcatattagatctaatac-aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||    
T  13300878 gcaagtaattctcatattagatctagtacaaaaaatatctcaaactaagtctcaaattatat--tattcaatacatgaatatattattgactacaaaaat 13300781  T
Q  200 atattattgagtatcaaa 217  Q
    |||||||||| |||||||    
T  13300780 atattattgactatcaaa 13300763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12044623 - 12044404
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactg-----tgtgagctctctatttatagataaagttcacaactaataagtgagaaactt 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||     |||||||||||| ||| |||| ||| |||||||||||||||||| ||||||    
T  12044623 cacaggaagcatcaactttgaatttcggtgtgtggaatgcactgctgtgtgtgagctctctttttctagagaaaattcacaactaataagtgaaaaactt 12044524  T
Q  96 tgggagcaagtaattctcatattagatctaatac-aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtaca 194  Q
    ||||||||||||||||  |||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||| ||||    
T  12044523 tgggagcaagtaattcatatattacatctagtacaaaaaatatttcaaattgagtctcaaaatatatcatattgagt---aaaatatattattcaataca 12044427  T
Q  195 gaaatatattattgagtatcaaa 217  Q
    ||||||||||| |||||||||||    
T  12044426 gaaatatattactgagtatcaaa 12044404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 36949391 - 36949575
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  36949391 cacaggaaacatcaattgtgattttcggtgtgttgaatgcactgtgtgagctctctatttatagaaaaaattcataactaataagtgagaaactttggga 36949490  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
     |||||||||| ||||||||||||| |||||||||||||  ||||||||  ||||||||||  |||||||||||||||||||||||    
T  36949491 acaagtaattcacatattagatctagtacaaaaatatct-taattgagtaccaaaatatattttattgagtacaaaaatatattat 36949575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21826829 - 21827037
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||    
T  21826829 cacaggaatcatcaactgtgaatttcggggtgtagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttggga 21826928  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  |    
T  21826929 acaagtaattc---------atctagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 21827018  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  21827019 tatattattgagtatcaaa 21827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 26869802 - 26869601
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||    
T  26869802 cacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttggga 26869703  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26869702 acaagtaattc---------atctagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 26869613  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  26869612 tgttattcagta 26869601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 21323463 - 21323328
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  21323463 acaggaagcatcaactgtgaatttcggtgtatggaaaacactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggaag 21323364  T
Q  102 caagtaattctcatattagatctaatacaaaaatat 137  Q
    |||||||||||||||||| ||||| |||||||||||    
T  21323363 caagtaattctcatattatatctagtacaaaaatat 21323328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8770849 - 8771060
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat-aagtgagaaactttggg 99  Q
    |||||||||||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||| ||| |||||||||||| ||  ||||||||||  |    
T  8770849 cacaggaagcatcaactgtgaatttcagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataaaaagagaaactttacg 8770948  T
Q  100 agcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||||||||| ||||| ||||||| ||||||||||| || ||||| ||   ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  8770949 agcaagtaattcacatatcagatctagtacaaaaatatttc-aattgtgtacaaaaatatatcatattaagtacaaaaatatattattcagtacataaat 8771047  T
Q  200 atattattgagta 212  Q
    || ||||| ||||    
T  8771048 atgttattcagta 8771060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 3666521 - 3666702
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||||||||||  |||||||||||||||| |||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||    
T  3666521 cacaagaagcatcaa--gtgaatttcggtgtgtagaatgccctgcgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgaga 3666618  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
     |||||||||| ||||||||||||| ||||||||||| | | |||||||   ||||||||| |||||  |||| ||||||||||    
T  3666619 acaagtaattcacatattagatctagtacaaaaatatattatattgagtacaaaaatatattatattatgtaccaaaatatatt 3666702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24435671 - 24435470
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||| |||||| | |||||||||  |||||||||||| |||||||||||||||||| ||||||| | |||||||||||| | ||||| |||    
T  24435671 cacaggaatcatcgactgtggaattcggtgtgaagaatgcactgtgagagctctctatttatagagaaagttctctactaataagtgaaagactttagga 24435572  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||| ||  |||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||| |||| |||||||| ||||||||| |||||    
T  24435571 acaagtaactcatatattagatctagtacaaaaatatctc-aattgagtaccaaaatatgttatattgaggacaataatatatttttcagtacaaaaata 24435473  T
Q  201 tat 203  Q
    |||    
T  24435472 tat 24435470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10754056 - 10754164
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  10754056 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 10754155  T
Q  101 gcaagtaat 109  Q
     ||||||||    
T  10754156 acaagtaat 10754164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 1429574 - 1429448
Alignment:
Q  90 aaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattca 189  Q
    ||||||||||| |||||||| | ||| ||||||||  |||||||||||||||| ||||||  |||||||||| ||||||| |||||||||||||||||||    
T  1429574 aaactttgggaacaagtaatacacatgttagatctggtacaaaaatatctcaa-ttgagtaccaaaatatattatattgaatacaaaaatatattattca 1429476  T
Q  190 gtacagaaatatattattgagtatcaaa 217  Q
     |||| ||||||||||||||||||||||    
T  1429475 atacataaatatattattgagtatcaaa 1429448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 187
Target Start/End: Complemental strand, 15395294 - 15395139
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaa----ttctcatattagatctaataca 130  Q
    |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| |||||| | | |||||||    ||| ||||||||||||| ||||    
T  15395294 gaatgcaccgagtgagctctctatttatagagaaaattcacaactaataagtgagtaacttttgaa-caagtaaattattcacatattagatctactaca 15395196  T
Q  131 aaaatatctcaaattgagt-ctcaaaatatatcatattgagtacaaaaatatattatt 187  Q
    |||||||||||| |||||| | | |||||||| |||||||||||||||||||||||||    
T  15395195 aaaatatctcaa-ttgagtacccgaaatatattatattgagtacaaaaatatattatt 15395139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 41099170 - 41099331
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaa 134  Q
    ||||||| ||||||||| ||||||||||||| ||| ||| ||||||||| |||| ||||||||||| ||||||||||         ||||| ||||||||    
T  41099170 gaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgataaactttgggaacaagtaattc---------atctagtacaaaaa 41099260  T
Q  135 tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattat 206  Q
    ||| |||| |||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  41099261 tatgtcaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttat 41099331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 21323340 - 21323292
Alignment:
Q  169 agtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21323340 agtacaaaaatatattattcagtacataaatatattattgagtatcaaa 21323292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 41099407 - 41099467
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  41099407 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatgttattcagta 41099467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 10755486 - 10755549
Alignment:
Q  142 aattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  10755486 aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 10755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 26869529 - 26869474
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattatt 207  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  26869529 caaaatatatcatattgagtacaaaaatatattatccagtacataaatatgttatt 26869474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 21827082 - 21827142
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||| ||||    
T  21827082 caaaatatattatattgagtacaaaaatatattatccagtacataaatatgttattcagta 21827142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26667909 - 26667941
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  26667909 cacaggaagcatcaactgtgaatttcggtgtgt 26667941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26939506 - 26939538
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  26939506 cacaggaagcatcaactgtgaatttcggtgtgt 26939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29167437 - 29167405
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  29167437 cacaggaagcatcaactgtgaatttcggtgtgt 29167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 6154897 - 6154867
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgt 31  Q
    |||||||||||||||||||||||||||||||    
T  6154897 cacaggaagcatcaactgtgaatttcggtgt 6154867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7452384 - 7452416
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  7452384 cacaggaagcatcaactgtgaatttcggcgtgt 7452416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3034249 - 3034465
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3034249 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 3034348  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  3034349 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 3034448  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  3034449 tattactgagtatcaaa 3034465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8888536 - 8888752
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8888536 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 8888635  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8888636 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 8888735  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  8888736 tattaatgagtatcaaa 8888752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 8070286 - 8070501
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8070286 acaggaagcatcaactgtgaatttcggtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggag 8070385  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8070386 caagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 8070485  T
Q  202 attattgagtatcaaa 217  Q
    |||| |||||||||||    
T  8070486 attactgagtatcaaa 8070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3693224 - 3693441
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3693224 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 3693323  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaaatatattattcagtacagaaat 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  3693324 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatatattattcaatacataaat 3693423  T
Q  200 atattattgagtatcaaa 217  Q
    |||||| |||||||||||    
T  3693424 atattactgagtatcaaa 3693441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8883776 - 8883992
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  8883776 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaataagtgagaaactttggga 8883875  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8883876 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 8883975  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  8883976 tattaatgagtatcaaa 8883992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3673192 - 3673409
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3673192 cacaggaagcatcaactgtgaatttcagtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 3673291  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaaatatattattcagtacagaaat 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  3673292 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatatattattcaatacataaat 3673391  T
Q  200 atattattgagtatcaaa 217  Q
    |||||| |||||||||||    
T  3673392 atattactgagtatcaaa 3673409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 45904033 - 45903817
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||| |||||||||||||||||| | ||| ||||  ||||||||||||||||||||| |||||||  || |||||||||||||||||| |||    
T  45904033 cacaggaaacattaactgtgaatttcggtgtattgaaagcacattgtgagctctctatttatagagaaagttccaaagtaataagtgagaaactttagga 45903934  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  45903933 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcttattgagtacaaaaatttattattcagtacataaata 45903834  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  45903833 tattattgagtatcaaa 45903817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 10585678 - 10585464
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10585678 cacaggaagcatcaactgtgaattttggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 10585579  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | |||| |||||    
T  10585578 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacataaata 10585481  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  10585480 tattattgactatcaaa 10585464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 217
Target Start/End: Complemental strand, 22758663 - 22758453
Alignment:
Q  6 gaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaag 105  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||| ||||| | ||||    
T  22758663 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaattttggaaacaag 22758564  T
Q  106 taattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    |||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  22758563 taatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatatta 22758465  T
Q  206 ttgagtatcaaa 217  Q
    ||||||||||||    
T  22758464 ttgagtatcaaa 22758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16749408 - 16749205
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  16749408 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 16749309  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  16749308 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 16749210  T
Q  201 tatta 205  Q
    |||||    
T  16749209 tatta 16749205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19776491 - 19776694
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  19776491 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 19776590  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  19776591 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 19776689  T
Q  201 tatta 205  Q
    |||||    
T  19776690 tatta 19776694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 6595881 - 6595697
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||| ||||||| | |||||  |||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  6595881 cacaggaagcatcaactatgaattttgatgtgtaaaatgcactctgtgagctctctatttatagagaaaattcacaactaataagtgaaaaactttggga 6595782  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
     |||||||||| ||||||||||||| |||||||||||||  ||||||||   ||||||||| ||||||||||||||||||||||||    
T  6595781 acaagtaattcacatattagatctagtacaaaaatatct-taattgagtacaaaaatatattatattgagtacaaaaatatattat 6595697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 12899197 - 12899021
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaa 134  Q
    ||||||||| ||||| |||  |||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||    
T  12899197 gaatgcactatgtgatctcattatttatagagaaaattcacagctaataagtgagaaactttgggaacaagtaattcacatattagatttagtacaaaaa 12899098  T
Q  135 tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||      |||||||||||||||||||||||    
T  12899097 tatctcaaattgagtatcaaaatatatcatgttgactacaaaaatatattattc------gaaatatattattgagtatcaaa 12899021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14425331 - 14425130
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||| |||| ||| |||||| |||||| ||||||||||||||||    
T  14425331 cacaggaatcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttctagagaaacttcacagctaataggtgagaaactttggga 14425232  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14425231 acaagtaattc---------atctagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 14425142  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  14425141 tgttattcagta 14425130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 9707079 - 9706896
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  9707079 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 9706980  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  9706979 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 9706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 37439048 - 37438845
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||| |||||||||||||||||| |||| ||||| |||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  37439048 cacatgaagtatcaactgtgaatttcggcgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 37438949  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||| ||| |||||    
T  37438948 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagcacaaaaata 37438850  T
Q  201 tatta 205  Q
    |||||    
T  37438849 tatta 37438845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8223541 - 8223742
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  8223541 cacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 8223640  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         |||||||||||||||||  | ||||   |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8223641 acaagtaattc---------atctaatacaaaaatat-gccaattatctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 8223730  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  8223731 tgttattcagta 8223742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18350263 - 18350062
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  18350263 cacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcgcaactaataggtgagaaactttggga 18350164  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  18350163 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattatttagtacataaata 18350074  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  18350073 tgttattcagta 18350062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 29834 - 30035
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||| ||||||||||||||||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  29834 cacaggaatcatcatctgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagaaaaatttcacaactaataggtgagaaactttggga 29933  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| ||||||| ||| || |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29934 acaagtaattc---------atctagtacaaaattatgtc-aattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 30023  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  30024 tgttattcagta 30035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4106814 - 4106620
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | | || |||||||||||||||||||            
T  4106814 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaa-------- 4106723  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4106722 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 4106625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4110666 - 4110472
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | | || |||||||||||||||||||            
T  4110666 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaa-------- 4110575  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4110574 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 4110477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 8488878 - 8488696
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||| | ||||||||||| ||||| |||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  8488878 cacaggaagcatcaactgtaactttcggtgtgtagaatg-actgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 8488780  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  8488779 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 8488696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15965661 - 15965855
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | | || |||||||||||||||||||            
T  15965661 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaa-------- 15965752  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15965753 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 15965850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15969585 - 15969779
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | | || |||||||||||||||||||            
T  15969585 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaa-------- 15969676  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15969677 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 15969774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15973509 - 15973703
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | | || |||||||||||||||||||            
T  15973509 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaa-------- 15973600  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15973601 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 15973698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8197058 - 8197259
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||    |||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  8197058 cacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 8197157  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         |||||||||||||||||  | ||||   |  |||||||||||||||||||||||||||||||||||||||| || |||||    
T  8197158 acaagtaattc---------atctaatacaaaaatat-gccaattatctaccaaaatatatcatattgagtacaaaaatatattattcagtgcataaata 8197247  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  8197248 tgttattcagta 8197259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 16023191 - 16023342
Alignment:
Q  54 tctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctca 153  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||| |||  ||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaacaagtaattcacatattagatctagtacaacaatatctcaaattaagtacca 16023290  T
Q  154 aaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    ||||| |||||||||  ||||||||||||||||  |||||| ||||||||||    
T  16023291 aaataaatcatattgcatacaaaaatatattatagagtacaaaaatatatta 16023342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 53358708 - 53358927
Alignment:
Q  1 cacaggaagcatcaactgtga--atttcggtgtgtggaatgcactgtg--tgagctctctatttatagataaagttcacaactaataagtgagaaacttt 96  Q
    |||| |||||||||||| |||  ||| |||||||| ||||||| ||||  ||||||||||||||||| | |||||||||||||||||||||| |||||      
T  53358708 cacatgaagcatcaactatgacaattacggtgtgtagaatgcattgtgtgtgagctctctatttataaagaaagttcacaactaataagtgaaaaactaa 53358807  T
Q  97 gggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacaga 196  Q
    || | ||| |||| | ||||||||||| | ||||||||||| || || |||||  |||||||||| |||||| ||||||||| |||||||| ||||||      
T  53358808 ggaaacaaataatacacatattagatcaagtacaaaaatatttc-aactgagtaccaaaatatattatattgcgtacaaaaacatattatttagtacatt 53358906  T
Q  197 aatatattattgagtatcaaa 217  Q
    ||||||||||||| |||||||    
T  53358907 aatatattattgattatcaaa 53358927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16055782 - 16055989
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||  |||||| |||   |||||| | || |||| ||| ||||||||| ||||||| | |||||||||||| ||||||| |||    
T  16055782 cacaggaagcatcaactgtgtttttcggcgtgaaaaatgcattttgagagccctccatttatagagaaagttctctactaataagtgaaaaactttagga 16055881  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||| || | ||||||||||| |||||||||||||  ||||||||  |||||||| | ||||| || |||| |||||||| |||| ||||||||||    
T  16055882 acaagtaactcacgtattagatctagtacaaaaatatct-taattgagtaccaaaatatgttatattaaggacaataatatatttttcattacagaaata 16055980  T
Q  201 tattattga 209  Q
    |||||||||    
T  16055981 tattattga 16055989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 51922944 - 51923142
Alignment:
Q  5 ggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaa 104  Q
    |||| ||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||| |||    
T  51922944 ggaatcatcaactgtgaatttcggtgtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaa 51923043  T
Q  105 gtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
     | ||||         ||||| |||||||||||  | |||||  |  |||||||||||||||||||||||||||||||||||| |||||| |||||| ||    
T  51923044 atcattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattgagtacataaatatttt 51923133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16043108 - 16043314
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||   ||||||||||  ||||||| | || |||| ||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  16043108 cacaggaagcatcaactgttt-tttcggtgtgaagaatgcattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttggga 16043206  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| ||| || ||| |||||||||||||||||||||||  |||||| |  |||||||  | ||||| || |||  |||||||| ||||||||| |||||    
T  16043207 acaattaaatcacatgttagatctaatacaaaaatatct-taattgattaccaaaatactttatattaagaacagtaatatatttttcagtacataaata 16043305  T
Q  201 tattattga 209  Q
    |||||||||    
T  16043306 tattattga 16043314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 16048603 - 16048807
Alignment:
Q  5 ggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaa 104  Q
    ||||||||||||||    ||||||||||  |||| || | || |||| ||||||||||||| ||||||| | |||||||||||| ||||||||||| |||    
T  16048603 ggaagcatcaactggttttttcggtgtgaagaatacattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaacaa 16048702  T
Q  105 gt-aattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
     | || || ||| ||||||||| |||||||||||||  ||||||||  |||||||| | ||||| || |||| |||||||| ||||||||| ||||||||    
T  16048703 ttaaactcacatgttagatctagtacaaaaatatct-taattgagtaccaaaatatgttatattaagaacaataatatatttttcagtacataaatatat 16048801  T
Q  204 tattga 209  Q
    ||||||    
T  16048802 tattga 16048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 429057 - 429220
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||||||||| ||| |||||||||| |||||||||| ||| ||||||| |||||  | || |||||||  |  ||||||||| ||||||||||    
T  429057 tttcggtgtgtggaatgaactttgtgagctctttatttatagagaaaattcacaagtaatatataagtaactttgacaataagtaattcacatattagat 429156  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||| |||| ||||||||||||||||||| ||| | |||| ||||  || | |||||||||||||    
T  429157 ctactacagaaatatctcaaattgagtcccaataaatataatatctagcataaaaatatattat 429220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 18699194 - 18699130
Alignment:
Q  153 aaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699194 aaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 18699130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 14425058 - 14424991
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14425058 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 14424991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18699266 - 18699202
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttataga 65  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  18699266 cacaggaagcatcaagtgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttataga 18699202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 14679958 - 14680080
Alignment:
Q  82 taagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 181  Q
    ||||||||||||||||| | |||||||| | | ||||||||||| ||   |||||| |||| |||||| ||||||| ||| ||||| |||||||||||||    
T  14679958 taagtgagaaactttggaaacaagtaatgcacctattagatctagtaattaaatatatcaa-ttgagtatcaaaatttattatattaagtacaaaaatat 14680056  T
Q  182 attattcagtacagaaatatatta 205  Q
    |||||||| |||| ||||||||||    
T  14680057 attattcattacacaaatatatta 14680080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 35456401 - 35456320
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    ||||||||||||||||| |||||  |||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||    
T  35456401 ggtgtgtggaatgcactatgtgaattctctatttatagagaaaattcacaactaataag-gagaaactttgggaacaagtaat 35456320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 8197328 - 8197389
Alignment:
Q  151 tcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  8197328 tcaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 8197389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 19340208 - 19340289
Alignment:
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 183  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||||  ||||||||||| ||||||||| ||||||||||    
T  19340208 caagtaattcacgtattagatctaatagaaaaatatcttaaattgagtaccaaaatatatcgtattgagtaaaaaaatatat 19340289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 8223812 - 8223872
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  8223812 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 8223872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 18349992 - 18349932
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  18349992 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatcttattcagta 18349932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 47540985 - 47540898
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaatt 110  Q
    ||||| ||||| ||||| ||| ||||| || |||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||    
T  47540985 tttcgatgtgtagaatgaactatgtgaactttctatttatagagaaaattcacaactaatatgtgagaaactttgggaacaagtaatt 47540898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 53502518 - 53502439
Alignment:
Q  107 aattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||| |||||||||| || |||||||||||||||||||||||  ||||||||||| ||| |||||||||| ||||||||    
T  53502518 aattcacatattagatatagtacaaaaatatctcaaattgagtgccaaaatatatcctatcgagtacaaaagtatattat 53502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 47541294 - 47541213
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    ||||||||| || |||| ||||| |||||||||||||||||||||||   ||| ||||||||||||||| ||||||||||||    
T  47541294 aagtaattcacaaattatatctagtacaaaaatatctcaaattgagtacaaaagtatatcatattgagtgcaaaaatatatt 47541213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 30105 - 30165
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||    
T  30105 caaaatatatcatattgagtacaaaaatatattattcagtacatgaatatgttattcagta 30165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 11997472 - 11997387
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    |||| |||||| ||||| |||  |||||||||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||||    
T  11997472 tttcagtgtgtagaatgtactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaacaagtaat 11997387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14671999 - 14672048
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 50  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14671999 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 14672048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 11997367 - 11997288
Alignment:
Q  106 taattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||| ||| ||||||||  |||||||||||||||| ||| ||   ||||||||||||||||||||||||||||||||||    
T  11997367 taattcacatgttagatcttgtacaaaaatatctcaa-ttgtgtacgaaaatatatcatattgagtacaaaaatatattat 11997288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 47540878 - 47540795
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaata-tatcatattgagtacaaaaatatatta 185  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||  ||||||| | ||| ||  |||||||||||||||||    
T  47540878 aagtaatttacatattagatctagtacaaaaatatctcaaattgagtgccaaaatattttcaaatcaagtacaaaaatatatta 47540795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 18012065 - 18012152
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaat 179  Q
    |||||| || |||||||||| |||||||||| || || |||||||| | ||||| |||  |||||||||||| |||||||| ||||||    
T  18012065 actttgcgaacaagtaattcacatattagatttagtagaaaaatattttaaattaagtaccaaaatatatcacattgagtaaaaaaat 18012152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 183
Target Start/End: Complemental strand, 20497931 - 20497784
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaa-gttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaa 133  Q
    ||||||||| || || |||||||||||||||||||  |||| ||||||||  | || |||||||  | ||| |||||| | ||||||||||| |||||||    
T  20497931 gaatgcactatgcgaactctctatttatagataaattttcataactaatatat-agtaactttgtaaacaattaattcacttattagatctagtacaaaa 20497833  T
Q  134 atatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 183  Q
    |||| || |||| ||| |||| |||||| ||||||  ||| |||||||||    
T  20497832 atatttc-aattaagtgtcaatatatattatattgtttacgaaaatatat 20497784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 49020114 - 49020167
Alignment:
Q  56 tatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||||    
T  49020114 tatttatagagaaaattcacaactaataagtgataaattttgggaacaagtaat 49020167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14438164 - 14438132
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  14438164 cacaggaagcatcaactgtgaatttcggtgtgt 14438132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18467843 - 18467875
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  18467843 cacaggaagcatcaactgtgaatttcggtgtgt 18467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32473488 - 32473456
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  32473488 cacaggaagcatcaactgtgaatttcggtgtgt 32473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39775192 - 39775160
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  39775192 cacaggaagcatcaactgtgaatttcggtgtgt 39775160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 35456303 - 35456221
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| ||||||||||||  ||||||||  |||||| | ||||  |||||||||| || |||||||||||||||| ||||    
T  35456303 aagtaattcacatattagatcttgtacaaaaacttctcaact-gagtaccaaaatatattatgttgagtacaaaaatattttat 35456221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 18349991 - 18349905
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  18349991 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatcttattcagtacataaatatatattattgagtatcaaa 18349905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 18011990 - 18012043
Alignment:
Q  45 tgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgg 98  Q
    |||||||| | |||||||||| ||| ||||||||||||| |||| |||||||||    
T  18011990 tgtgagctatttatttatagagaaaattcacaactaatatgtgataaactttgg 18012043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18472637 - 18472669
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||| ||||||||||||||||||||    
T  18472637 cacaggaagcattaactgtgaatttcggtgtgt 18472669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 35458090 - 35458146
Alignment:
Q  105 gtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatat 161  Q
    ||||||| ||||||||||| |||  |||||||||| |||||||||  ||||||||||    
T  35458090 gtaattcacatattagatcaaattaaaaaatatcttaaattgagtaccaaaatatat 35458146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 55204015 - 55203920
Alignment:
Q  85 gtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 181  Q
    ||||||||||||| || ||| |||| | ||| | ||||||| ||  ||||||||||| |||||||   ||||||| ||||||||||||| |||||||    
T  55204015 gtgagaaactttgagaacaattaatccacatgt-agatctagtattaaaatatctcatattgagtactaaaatatctcatattgagtaccaaaatat 55203920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4237829 - 4237613
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4237829 cacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 4237730  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  4237729 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 4237630  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  4237629 tattactgagtatcaaa 4237613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4242568 - 4242352
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4242568 cacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 4242469  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  4242468 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 4242369  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  4242368 tattactgagtatcaaa 4242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 31449353 - 31449137
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31449353 cacagaaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 31449254  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  31449253 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatatcgagtacaaaaatatattattcagtacataaata 31449154  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  31449153 tattactgagtatcaaa 31449137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 8330851 - 8330635
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8330851 cacaggaagcatcaactgtgaatttcggtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 8330752  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8330751 gcaagtaattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcttattgagtacaaaaatatattattcagtacaaaaata 8330652  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  8330651 tattattgagtatcaaa 8330635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 43302169 - 43301958
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  43302169 aggaagcatcaactgtgaatttcgatgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaataagtgagaaactttgggagca 43302070  T
Q  104 agtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    ||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43302069 agtaattctcatattagatttagtacaaaaatatctcaaattgag--tcaaaatatatcatattgagtacaaaaatatattattcagtacataaatatat 43301972  T
Q  204 tattgagtatcaaa 217  Q
    || |||||||||||    
T  43301971 tactgagtatcaaa 43301958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 34818194 - 34817978
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||   ||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||    
T  34818194 cacaggaagcatcaactgtgaatttcggtgtaccgaaagcactgtgtgaactctctatttatagagaaagttcacaactaataactgagaaactttcgga 34818095  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34818094 gcaagtaattctcatattagatctagtacaaaaacatctcaaattgagtctcaaaatatatcttattgagtacaaaaatatattattcagtacagaaata 34817995  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  34817994 tattattgagtatcaaa 34817978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25367474 - 25367259
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  25367474 cacatgaagcatcaattgtgaatttcggtgtatggaaagcactgtgtgaactctctatttatagagaaagttcacaactagtaagtgagaaactttggga 25367375  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  25367374 tcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatataatattgagtac-aaaatatattattcagtacaaaaata 25367276  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  25367275 tattattgagtatcaaa 25367259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 37772313 - 37772526
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37772313 cacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 37772412  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  37772413 gcaagt-tttctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 37772509  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  37772510 tattattgactatcaaa 37772526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23915098 - 23915313
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||  | |||| ||||||||||| ||||||||||||| |    
T  23915098 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataaatgagaaactttggaa 23915197  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| |||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  23915198 acaaataatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 23915296  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||| |||||||||    
T  23915297 tattattaagtatcaaa 23915313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21384350 - 21384552
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  21384350 cacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 21384449  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| |||||  ||||||||||||||||||||||||| |||||    
T  21384450 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca-aaata 21384547  T
Q  201 tatta 205  Q
    |||||    
T  21384548 tatta 21384552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21387770 - 21387972
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  21387770 cacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 21387869  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| |||||  ||||||||||||||||||||||||| |||||    
T  21387870 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca-aaata 21387967  T
Q  201 tatta 205  Q
    |||||    
T  21387968 tatta 21387972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21411629 - 21411832
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  21411629 cacatgaagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 21411728  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  21411729 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 21411827  T
Q  201 tatta 205  Q
    |||||    
T  21411828 tatta 21411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21806121 - 21806324
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  21806121 cacatgaagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 21806220  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  21806221 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 21806319  T
Q  201 tatta 205  Q
    |||||    
T  21806320 tatta 21806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 19393219 - 19393018
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||    |||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  19393219 cacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagatctctatttatagagaaatttcacaactaataagtgagaaactttggga 19393120  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19393119 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 19393030  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  19393029 tgttattcagta 19393018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 22104281 - 22104482
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||| |||||||||||||||   ||||||| ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||    
T  22104281 cacaggaatcatcaaatgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttggga 22104380  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22104381 acaagtaattc---------atctagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 22104470  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  22104471 tgttattcagta 22104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 4582784 - 4582593
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  4582784 cacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 4582685  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat-attattcagtacagaaat 199  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4582684 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatataattattcagtacataaat 4582595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18862058 - 18861864
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  18862058 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 18861967  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  18861966 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 18861869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 16066704 - 16066504
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    ||||||||||||||||||||||||||||||    | |||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||      
T  16066704 acaggaagcatcaactgtgaatttcggtgtccatagtgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttgggga 16066605  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    ||||||||||         || || |||||||||||| | ||||||||   ||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  16066604 caagtaattc---------atgtagtacaaaaatatc-ccaattgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatat 16066515  T
Q  202 attattgagta 212  Q
     ||||| ||||    
T  16066514 gttattcagta 16066504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 10933904 - 10934031
Alignment:
Q  59 ttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaata 158  Q
    ||||||| ||| | |||| |||||| |||||||||||||| | |||||||||| ||||||||||||| ||||||||||||| |||||||||  |||||||    
T  10933904 ttatagaaaaaatccacagctaatatgtgagaaactttggtaacaagtaattcacatattagatctagtacaaaaatatcttaaattgagtgccaaaata 10934003  T
Q  159 tatcatattgagtacaaaaatatattat 186  Q
    | ||||||||||||||||||||||||||    
T  10934004 tgtcatattgagtacaaaaatatattat 10934031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 17153198 - 17153320
Alignment:
Q  55 ctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaa 154  Q
    ||||||||||| |||  |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||| ||| || |    
T  17153198 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacaagtaattcacatattagatttagtacaaaaatatctcaaattcagtatc-a 17153296  T
Q  155 aatatatcatattgagtacaaaaa 178  Q
    |||| |||||||||||||||||||    
T  17153297 aatagatcatattgagtacaaaaa 17153320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 21827427 - 21827253
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |   || |||||||||||||||||||            
T  21827427 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatcatttacaactaataagtgagaaa-------- 21827336  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  21827335 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 21827253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 211
Target Start/End: Complemental strand, 17157486 - 17157333
Alignment:
Q  55 ctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaa 154  Q
    ||||||||||| |||  |||||||||||| |||||||||||||||| || ||||||| || |||||||||| | ||||||||||||||||| |||  | |    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacacgtaattcacaaattagatctagttcaaaaatatctcaaattcagt-acca 17157388  T
Q  155 aatatatcatattgagtac-aaaaatatattattcagtacagaaatatattattgagt 211  Q
    |||| |||||||||||||| ||||||||||| || |||||  ||||||||||||||||    
T  17157387 aatagatcatattgagtacaaaaaatatatt-ttgagtac--aaatatattattgagt 17157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 25733652 - 25733455
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||  | |||| ||||||                 || |     
T  25733652 acaggaagcatcaactgtgaatttcggtgtgtagaatgcactttgtgagttctctatttatagggatagtttacaact-----------------ggaaa 25733570  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||||| | | ||||||||||| |||  ||||||||||| ||||||   ||||||||| ||||| |||||||||||| ||||||||||||| ||||||    
T  25733569 caagtaatgcacctattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatacattattcagtacaaaaatat 25733471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 14036083 - 14036171
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattc 111  Q
    ||||||||||||||||| | | ||||||||||||||||||||| ||| ||||| | ||||| |||||||||||||||| | ||||||||    
T  14036083 tttcggtgtgtggaatgaattttgtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttgggaacgagtaattc 14036171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 22104554 - 22104614
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||    
T  22104554 caaaatatatcatattgagtagaaaaatatattattcagtacataaatatgttattcagta 22104614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 14036186 - 14036254
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatata 160  Q
    ||||||||| ||| |||||| | | ||||||||| ||||||||||||||||||||||| ||||||||||    
T  14036186 actttgggaacaaataattcacttgttagatctagtacaaaaatatctcaaattgagtatcaaaatata 14036254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 19392946 - 19392886
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||| ||||    
T  19392946 caaaatatattatattgagcacaaaaatatattattcagtacataaatatgttattcagta 19392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 29220759 - 29220871
Alignment:
Q  71 ttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgag 170  Q
    |||||||||||||  ||||||||||||  | ||| ||| |   |||||| ||||| ||||||||||||||||||  |||  |||| |||||||||||||     
T  29220759 ttcacaactaatatatgagaaactttgaaaacaaataact---atattatatctagtacaaaaatatctcaaatcaagtaccaaagtatatcatattgaa 29220855  T
Q  171 tacaaaaatatattat 186  Q
    ||||||||||| ||||    
T  29220856 tacaaaaatattttat 29220871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 42972847 - 42972905
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatc 162  Q
    ||||||||| ||||||||||| | |||||||||||||| ||||||||  |||||||||||    
T  42972847 aagtaattcacatattagatcaagtacaaaaatatctc-aattgagtaccaaaatatatc 42972905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 22104555 - 22104641
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  22104555 aaaatatatcatattgagtagaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 22104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2839890 - 2839949
Alignment:
Q  51 ctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattc 111  Q
    ||||||||||||| | | ||||||||||||||| |||||||| ||||| || |||||||||    
T  2839890 ctctctatttatataaacagttcacaactaatatgtgagaaa-tttggaagtaagtaattc 2839949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2844577 - 2844636
Alignment:
Q  51 ctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattc 111  Q
    ||||||||||||| | | ||||||||||||||| |||||||| ||||| || |||||||||    
T  2844577 ctctctatttatataaacagttcacaactaatatgtgagaaa-tttggaagtaagtaattc 2844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 42972749 - 42972821
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||| ||||||||| |||||  | |||||||||||| ||| ||  | ||||| ||||||||||||||||||    
T  42972749 gtgtgtagaatgcactatgtgaaatatctatttatagagaaaatttcccactaaaaagtgagaaactttggga 42972821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9650448 - 9650232
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9650448 cacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 9650349  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  9650348 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatactattcagtacataaata 9650249  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  9650248 tattactgagtatcaaa 9650232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 27256843 - 27257059
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27256843 cacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 27256942  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27256943 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 27257042  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  27257043 tattattgagtatcaaa 27257059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8076656 - 8076872
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  8076656 cacatgaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaataagtgagaaactttggga 8076755  T
Q  101 gcaagtaattctcatattagatctaatac-aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||||||||  |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8076756 gcaagtaattcatatattagatctagtacaaaaaatatctcaaattgagtttcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 8076855  T
Q  200 atattattgagtatcaa 216  Q
    |||||||||||||||||    
T  8076856 atattattgagtatcaa 8076872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 47102145 - 47102350
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |          || ||||||||||||||||||||||||    
T  47102145 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctattcaca----------actactaataagtgagaaactttggga 47102234  T
Q  101 gcaagtaattctcatattagatctaatacaaaaa-tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||||||||  |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47102235 gcaagtaattcatatattagatctagtacaaaaaatatctcaaattgagtctcaaaata-atcatattgagtacaaaaatatattattcagtacagaaat 47102333  T
Q  200 atattattgagtatcaa 216  Q
    |||||||||||||||||    
T  47102334 atattattgagtatcaa 47102350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 40864851 - 40864669
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  40864851 cacaggaagcatcaactgtgaatttcggtgtatcgaaagtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagtaactttggga 40864752  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 183  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  40864751 gcaagtaattctcatattagatttagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagcaaaaaaaaatat 40864669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 14928124 - 14927909
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |  ||| ||||||||||||||||||||||||| |    
T  14928124 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaa 14928025  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||| |||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  14928024 acaagtaatgcacctattagatctagtactaaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 14927926  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  14927925 tattattgagtatcaaa 14927909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15351590 - 15351375
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |  ||| ||||||||||||||||||||||||| |    
T  15351590 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaa 15351491  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||| |||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  15351490 acaagtaatgcacctattagatctagtactaaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 15351392  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  15351391 tattattgagtatcaaa 15351375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19640905 - 19641121
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||| | ||| | ||  ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19640905 cacaagaagcatcaactgtgaatttcggtgtatcgaaagaacaatgtgaacactctatttatagagaaagttcacaactaataagtgagaaactttggga 19641004  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||| | | ||||||||| |||| |||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19641005 gcaagtaattcacgtgttagatctagtacacaaatatttcaaattaagtatcaaaatatatcatattgagtccaaaaatatattattcagtacagaaata 19641104  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  19641105 tattattgaatatcaaa 19641121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 16459869 - 16459654
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  | |||| ||||||||||||||||||||||||| |    
T  16459869 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaactttggaa 16459770  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  || |||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||| ||||||    
T  16459769 acaagtaatgcacctattagatctagtacttaagtatctc-aattgagtaccaaaatatattatattaggtacaaaaatatattattcagtactgaaata 16459671  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  16459670 tattattgagtatcaaa 16459654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20488554 - 20488757
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  20488554 cacacgaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 20488653  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  20488654 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 20488752  T
Q  201 tatta 205  Q
    |||||    
T  20488753 tatta 20488757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16580835 - 16581050
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||| |||||  ||||||||||||||| || |||||||| |  | |||| |||| |||||||||||||||||||| |    
T  16580835 cacatgaagcatcaactgtgaatttcgttgtgtacaatgcactgtgtgagttccctatttattgggatagtttacaattaataagtgagaaactttggaa 16580934  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||| ||||||||   ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  16580935 acaagtaatacacctattagatctagtacttaaatatctc-aattgagtactaaaatatattatattaagtacaaaaatatattattcagtacagaaata 16581033  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  16581034 tattattgagtatcaaa 16581050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 18426533 - 18426736
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  18426533 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 18426632  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  18426633 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 18426731  T
Q  201 tatta 205  Q
    |||||    
T  18426732 tatta 18426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20485193 - 20485396
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||| | |    
T  20485193 cacacgaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaacttttgaa 20485292  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| |||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  20485293 acaactaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 20485391  T
Q  201 tatta 205  Q
    |||||    
T  20485392 tatta 20485396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 32302445 - 32302659
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||  ||| || ||| |||||||||| | |||| ||||||||||||||||||| ||||| |    
T  32302445 cacaggaaacatcaactgtgaatttcggtgtgtagaatgcaccatgtcagttctatatttatagagatagtttacaactaataagtgagaaattttggaa 32302544  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||| | |||  |||||||||||  |||||  |||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  32302545 acaagtaatgcacctattagatccagtacttaaatatctcaa--tgagtaccaaaatatattatattaagtacaaaaatatattattcagtgcagaaata 32302642  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  32302643 tattattgagtatcaaa 32302659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14259612 - 14259818
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||   |||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  14259612 cacaggaagcatcaactgtgaatttcaaagtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 14259711  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| |         ||||| |||  ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  14259712 acaagtaatgc---------atctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 14259801  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  14259802 tattattgagtatcaaa 14259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 8954750 - 8954554
Alignment:
Q  6 gaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaag 105  Q
    ||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  8954750 gaagcatcaactgggaatttcggggttcggaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaag 8954651  T
Q  106 taattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    |||||          ||||| ||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||| |||    
T  8954650 taatt---------tatctagtacaaaaatatgtc-aattgagtaccaaaatatatcatattgagtacaaaaatatattatttagtacataaatatgtta 8954561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19096860 - 19097062
Alignment:
Q  1 cacaggaagcatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggg 99  Q
    |||| |||||||||||||||||||| ||| ||   ||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |    
T  19096860 cacatgaagcatcaactgtgaattttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgcg 19096959  T
Q  100 agcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    | ||||||||||         || || |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  19096960 aacaagtaattc---------atttagtacaaaaatatctc-aattgagtatcaaaatatatcatattgagtacaaaaatatactattcagtacataaat 19097049  T
Q  200 atattattgagta 212  Q
    || ||||| ||||    
T  19097050 atgttattcagta 19097062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 45169419 - 45169236
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  45169419 cacaggaagtatcaactgtgaatttcggtgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 45169320  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  45169319 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 45169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 29727292 - 29727079
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat----aagtgagaaacttt 96  Q
    |||||||| |||||||||||||||| |||||   |||||||| |||||||||||||||||||||| ||| ||||||||||||    || |||||||||||    
T  29727292 cacaggaaacatcaactgtgaattttggtgtccagaatgcaccgtgtgagctctctatttatagagaaaattcacaactaattaacaaatgagaaacttt 29727193  T
Q  97 gggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacaga 196  Q
    |  | ||||||| || |||||||| | || ||||||||||| || ||||||||  |||||||||| ||||||||||||||||||||||||||| |||| |    
T  29727192 gcaaacaagtaactcacatattaggtatagtacaaaaatatttc-aattgagtaccaaaatatattatattgagtacaaaaatatattattca-tacata 29727095  T
Q  197 aatatattattgagta 212  Q
    ||||| ||||| ||||    
T  29727094 aatatgttattcagta 29727079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 10488759 - 10488602
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga-gcaagtaattctcatattagatctaa 126  Q
    |||||||||||| ||| | |||||||| |||||||| | |||  ||||||||||||   |||||||||||||| | ||||||| | |||||||||| ||     
T  10488759 gtgtgtggaatgaactatatgagctctatatttataaaaaaaaatcacaactaatataggagaaactttgggaagaaagtaatgcacatattagatttag 10488660  T
Q  127 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  10488659 tagaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaaatatatt 10488602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 9008789 - 9008899
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaa 126  Q
    |||||||||||||| || || |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||     
T  9008789 ggtgtgtggaatgcgctatgagagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaaataattcacatattaaatctat 9008888  T
Q  127 tacaaaaatat 137  Q
    |||||||||||    
T  9008889 tacaaaaatat 9008899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 36477583 - 36477777
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||     
T  36477583 cacaggaagcatcaactgtgaatttcggtgtg-------cattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggg 36477675  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| ||||||         || || |||||||||||| | ||||| ||  ||||||||||||||||||||||||||||||||||| || |||| ||| |    
T  36477676 acaaataattc---------atttagtacaaaaatatcac-aattgtgtaccaaaatatatcatattgagtacaaaaatatattatgcaatacacaaaca 36477765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 846096 - 845890
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  846096 cacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttggga 845997  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         || || |||||||||||||| ||||||||   |||||||||  |||| |||||| |||||| |||||  ||||| ||  |    
T  845996 acaagtaattc---------atttagtacaaaaatatctc-aattgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaata 845909  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  845908 tatattattgagtatcaaa 845890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 853473 - 853267
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  853473 cacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttggga 853374  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         || || |||||||||||||| ||||||||   |||||||||  |||| |||||| |||||| |||||  ||||| ||  |    
T  853373 acaagtaattc---------atttagtacaaaaatatctc-aattgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaata 853286  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  853285 tatattattgagtatcaaa 853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1211477 - 1211271
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  1211477 cacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttggga 1211378  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         || || |||||||||||||| ||||||||   |||||||||  |||| |||||| |||||| |||||  ||||| ||  |    
T  1211377 acaagtaattc---------atttagtacaaaaatatctc-aattgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaata 1211290  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  1211289 tatattattgagtatcaaa 1211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 11017557 - 11017387
Alignment:
Q  13 caactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattct 112  Q
    ||||||||||||||||||  | ||||| |||| | || ||||||||||||| | ||| ||||||||||||||||||||||||||| ||  || ||||||     
T  11017557 caactgtgaatttcggtggatagaatgtactgcgcgacctctctatttatatagaaaattcacaactaataagtgagaaactttgaga-aaaataattca 11017459  T
Q  113 catattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
    ||||||||||||| |  ||||||||||| ||||||||   ||||||||| ||||||||||| |||||||||||    
T  11017458 catattagatctagtgtaaaaatatctc-aattgagtactaaaatatattatattgagtaccaaaatatatta 11017387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 838920 - 838810
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  838920 cacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttggga 838821  T
Q  101 gcaagtaattc 111  Q
     ||||||||||    
T  838820 acaagtaattc 838810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1204100 - 1203990
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  1204100 cacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttggga 1204001  T
Q  101 gcaagtaattc 111  Q
     ||||||||||    
T  1204000 acaagtaattc 1203990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 11247841 - 11247695
Alignment:
Q  45 tgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaat 144  Q
    |||||||||| |||||||||| ||| ||||||| ||| | ||||  |||||||||| ||| |||||| ||||||| ||||| |||||||||| |||||||    
T  11247841 tgtgagctctatatttatagagaaaattcacaattaacatgtga--aactttgggaacaaataattcacatattatatctagtacaaaaataactcaaat 11247744  T
Q  145 tgagtctcaaaatatatcatattgagtacaaaaatatattattcagtac 193  Q
    |||   |||||||| || ||||||||||||||||||||||||| |||||    
T  11247743 tgaaaatcaaaatagattatattgagtacaaaaatatattattgagtac 11247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 11297381 - 11297534
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||||||||  |||  |||| ||  ||||||||||| |||  |||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  11297381 tttcggtgtgtggaataaactacgtgatctacctatttatagagaaaaatcacaactaatatgtgagaaactttgtgaacaagtaattcacatattagat 11297480  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa 177  Q
    ||| ||||||||||| | ||||| |||  | ||||| ||||||||||||||||||    
T  11297481 ctagtacaaaaatattttaaattcagt-accaaatagatcatattgagtacaaaa 11297534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 1043847 - 1043985
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||  ||||| | | ||| |||||| |||||||||| ||| ||||||| ||||| |||||||||||||| | |||||||||| | ||||||||    
T  1043847 tttcggtgtgcagaatgaattatgtcagctctttatttatagagaaaattcacaattaatatgtgagaaactttggaaacaagtaattcacgtattagat 1043946  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatat 161  Q
    ||| ||||||||||||||  |||||||  ||||||||||    
T  1043947 ctagtacaaaaatatctcgcattgagtaccaaaatatat 1043985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 10499566 - 10499401
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactt-------tgggagcaagtaattctcatatta 119  Q
    |||||||||||||||||    ||| |||||||||||||| ||| |||||||||||||||||||||||||       |||||  | ||||||| |||||||    
T  10499566 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggggtttgggattaggtaattcacatatta 10499467  T
Q  120 gatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||| || |||||||||||||| |||| |||  |||||||||| || ||||||| |||||||||||||    
T  10499466 gatttagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10499401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 10504595 - 10504430
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactt-------tgggagcaagtaattctcatatta 119  Q
    |||||||||||||||||    ||| |||||||||||||| ||| |||||||||||||||||||||||||       |||||  | ||||||| |||||||    
T  10504595 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggggtttgggattaggtaattcacatatta 10504496  T
Q  120 gatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||| || |||||||||||||| |||| |||  |||||||||| || ||||||| |||||||||||||    
T  10504495 gatttagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 15565549 - 15565705
Alignment:
Q  30 gtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatac 129  Q
    ||||||||||  || | |||| |||||||| ||||| |||   ||||| ||||| || ||||||||| |||  ||| ||||| ||||| | ||||| |||    
T  15565549 gtgtggaatgacctatatgagttctctattgatagagaaaacccacaattaatatgtaagaaacttttggaataagaaattcacatatgaaatctagtac 15565648  T
Q  130 aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||||||||||||||  |||||||||||||||| || |||||||||||||||    
T  15565649 aaaaatatctcaaattgagtaccaaaatatatcatattaagaacaaaaatatattat 15565705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 7838780 - 7838868
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 181  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||  |||| |||||||||||| ||||||||||||    
T  7838780 actttgggaacaagtaattcaaatattagatctagtacaaaaatatctcaaattgagtaccaaattatatcatattg-gtacaaaaatat 7838868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 7838858 - 7838935
Alignment:
Q  127 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    ||||||||||||| |||||||||  |||||||||||||||||  ||||||||||||||||| |||||| |||||||||    
T  7838858 tacaaaaatatcttaaattgagtaccaaaatatatcatattggatacaaaaatatattattgagtacaaaaatatatt 7838935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 853222 - 853155
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  853222 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 853155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 1211226 - 1211159
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  1211226 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 1211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 19097134 - 19097194
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  19097134 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 19097194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 10532295 - 10532222
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||  ||||  |||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  10532295 ggtgtgtggaatgcactacgtgaattctctacttatagagaaaattcacaactaataagtgagaaactttggga 10532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 44784029 - 44784136
Alignment:
Q  77 actaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaa 176  Q
    ||||||| || ||||||||||||| |||||| ||| |||||||||| || |||| | ||||||||||||||||   |||||||||||||| |||||| ||    
T  44784029 actaatacgttagaaactttgggaacaagta-ttcacatattagatttagtacagatatatctcaaattgagtactaaaatatatcatatcgagtac-aa 44784126  T
Q  177 aatatattat 186  Q
    ||||||||||    
T  44784127 aatatattat 44784136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 838689 - 838638
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  838689 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatat 838638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 845845 - 845794
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  845845 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatat 845794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 1203869 - 1203818
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  1203869 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatat 1203818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 9008903 - 9008957
Alignment:
Q  163 atattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9008903 atatggagtacaaaaatatattattcagtaaagaaatatattattgactatcaaa 9008957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 10532207 - 10532114
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||||||  ||||||||| ||||||||||||| |||||||||||||| |||| |||  |||||||||| || ||||||| |||| ||||||||    
T  10532207 actttgggattaagtaattcacatattagatctagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaactatattat 10532114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 13343803 - 13343710
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||||||  ||||||||| ||||||||||||| |||||||||||||| |||| |||  |||||||||| || ||||||| |||||| ||||||    
T  13343803 actttgggaataagtaattcacatattagatctagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatctattat 13343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 838788 - 838734
Alignment:
Q  165 attgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  838788 attgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 1203968 - 1203914
Alignment:
Q  165 attgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  1203968 attgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 1203914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 2629290 - 2629401
Alignment:
Q  29 tgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaata 128  Q
    ||||||||||| ||| |||||||||| |||||||||| ||| || |||||||||| ||||||||  ||  || |||||||||| ||||| | ||| | ||    
T  2629290 tgtgtggaatgaactatgtgagctctatatttatagagaaaatttacaactaatatgtgagaaatattttgatcaagtaattcacatatcaaatccagta 2629389  T
Q  129 caaaaatatctc 140  Q
    | ||||||||||    
T  2629390 ccaaaatatctc 2629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 11289418 - 11289348
Alignment:
Q  122 tctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagta 192  Q
    |||| |||||||||| ||||||| || | | ||||||||| ||||||||||||||||||||||||| ||||    
T  11289418 tctagtacaaaaataactcaaatcgaatataaaaatatattatattgagtacaaaaatatattattgagta 11289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 13343891 - 13343809
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    ||||||||||||||| |   |||| || ||||||||||| ||| ||||||||||||||| |||||||||||||| ||| ||||    
T  13343891 ggtgtgtggaatgcattacctgagttcactatttatagagaaaattcacaactaataagagagaaactttgggaacaattaat 13343809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 15566012 - 15566099
Alignment:
Q  30 gtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatatta 119  Q
    |||||||||| ||||| ||||||||  ||||||| | |||  |||||||||||| |||||||||||| ||| |||||||||| |||||||    
T  15566012 gtgtggaatgaactgtatgagctct--atttatatagaaaactcacaactaatatgtgagaaacttttggaacaagtaattcacatatta 15566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 11288914 - 11288971
Alignment:
Q  142 aattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  11288914 aattgaatatcaaaatatatcatattgagtacaaaattatattattaagtacaaaaat 11288971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 11296715 - 11296772
Alignment:
Q  142 aattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  11296715 aattgaatatcaaaatatatcatattgagtacaaaattatattattgagtacaaaaat 11296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 1043985 - 1044053
Alignment:
Q  118 tagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||||| ||||||||||| ||| |||||||  ||||| |||| ||||||||| ||||||||||||||    
T  1043985 tagatctagtacaaaaatatttcatattgagtaccaaaagatattatattgagtgcaaaaatatattat 1044053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 18385144 - 18385204
Alignment:
Q  51 ctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattc 111  Q
    ||||||||||||||| ||||||||||| | ||| |||||||||||| ||| ||||||||||    
T  18385144 ctctctatttatagagaaagttcacaattgatacgtgagaaacttttggaacaagtaattc 18385204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 11266343 - 11266284
Alignment:
Q  142 aattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||| | |||||||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  11266343 aattgaatatcaaaatatatcatattgagtataaaattatattattgagtacaaaaatat 11266284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 11247285 - 11247323
Alignment:
Q  151 tcaaaatatatcatattgagtacaaaaatatattattca 189  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  11247285 tcaaaatatatcatattgagtacaaaattatattattca 11247323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 47552676 - 47552626
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaa 142  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||||    
T  47552676 actttgggagtaagtaattcacatattagatttagtacaaaaatatctcaa 47552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 13337445 - 13337518
Alignment:
Q  94 tttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatatt 167  Q
    ||||||| |||||||||| ||||||| ||| |||  | |||||||| ||||||||| ||||||||||| |||||    
T  13337445 tttgggaacaagtaattcacatattaaatcaaattaagaaatatcttaaattgagtatcaaaatatattatatt 13337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 40998224 - 40998159
Alignment:
Q  153 aaaatatatcatattgagtacaaaa-atatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||| ||||||||||||| |||||||||| | || | ||||||||||||||| ||||||    
T  40998224 aaaatatatcaaattgagtacaaaagatatattattgaataaacaaatatattattgagaatcaaa 40998159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26341838 - 26341870
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  26341838 cacaggaagcatcaactgtgaatttcggtgtgt 26341870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 11265837 - 11265908
Alignment:
Q  122 tctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtac 193  Q
    |||| ||| |||||| ||||||| || | | |||||||||||||||||||| | |||||||||||| |||||    
T  11265837 tctagtaccaaaataactcaaatagaatataaaaatatatcatattgagtatataaatatattattaagtac 11265908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 18385247 - 18385281
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||||||||||||||| ||||||||||||||||    
T  18385247 caaaatatatcatattgattacaaaaatatattat 18385281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 47342409 - 47342355
Alignment:
Q  132 aaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||| |||||| |||  |||||||||| ||||||||| ||||||||||||||    
T  47342409 aaatatcacaaattaagtaccaaaatatattatattgagtgcaaaaatatattat 47342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 11017387 - 11017354
Alignment:
Q  153 aaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| ||||||||||||||||||||||||    
T  11017387 aaaatatattatattgagtacaaaaatatattat 11017354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 11289345 - 11289292
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    |||||||||||||||  ||  |||||||||| ||||||| ||||||||||||||    
T  11289345 aaaatatctcaaattaggtaccaaaatatattatattgactacaaaaatatatt 11289292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 13345350 - 13345427
Alignment:
Q  94 tttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagt 171  Q
    ||||||| |||||||||| ||||||| ||| |||  | |||||| | | ||||||| ||||||||||| |||||||||    
T  13345350 tttgggaacaagtaattcacatattacatcaaattaagaaatatattatattgagtatcaaaatatattatattgagt 13345427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 11247350 - 11247382
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatatt 184  Q
    ||||||| |||||||||||||||||||||||||    
T  11247350 caaaatacatcatattgagtacaaaaatatatt 11247382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 11266269 - 11266218
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    ||||||| |||||||||| ||||||| ||||||||| |||||| |||||||||    
T  11266269 caaaatacatcatattgaatacaaaa-tatattattgagtacaaaaatatatt 11266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 11296789 - 11296840
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    ||||||| |||||||||| ||||||| ||||||||| |||||| |||||||||    
T  11296789 caaaatacatcatattgaatacaaaa-tatattattgagtacaaaaatatatt 11296840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 39049931 - 39049872
Alignment:
Q  124 taatacaaaaatatctcaaattgagtctca-aaatatatcatattgagtacaaaaatatat 183  Q
    |||||||||||||| ||||| ||||| ||| |||||||| ||| |||||||||||||||||    
T  39049931 taatacaaaaatatgtcaaactgagt-tcagaaatatattataatgagtacaaaaatatat 39049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13521473 - 13521257
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13521473 cacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 13521374  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  13521373 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcattacataaata 13521274  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  13521273 tattactgagtatcaaa 13521257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34561030 - 34561246
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34561030 cacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 34561129  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  34561130 gcaagtaattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 34561229  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  34561230 tattattgagtatcaaa 34561246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 31297977 - 31297766
Alignment:
Q  7 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaa-g 105  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |    
T  31297977 aagcatcaattgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaataagtgagaaactttgggagcaaag 31297878  T
Q  106 taattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  31297877 taattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcacattgagtacaaaaatatattattcagtacataaatatatta 31297778  T
Q  206 ttgagtatcaaa 217  Q
    ||||||||||||    
T  31297777 ttgagtatcaaa 31297766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 41817388 - 41817617
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctattta-------------tagataaagttcacaactaataagtg 87  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||             |||| |||||||||||||||||||||    
T  41817388 cacaagaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagctctctatttacagagaagctctctagagaaagttcacaactaataagtg 41817487  T
Q  88 agaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattatt 187  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41817488 agaaactttgggagcaagtaattctcatattagatctagtacaaaaacatctcaaatcgagtctcaaaatatatcatattgagtacaaaaatatattatt 41817587  T
Q  188 cagtacagaaatatattattgagtatcaaa 217  Q
    ||||| ||||||||||||| ||||||||||    
T  41817588 cagtaaagaaatatattatcgagtatcaaa 41817617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7902599 - 7902385
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7902599 cacaggaagcatcaaatgtgaatttcggtgtgtgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 7902500  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  7902499 gcaagtaattctcatattagatctagtataaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 7902402  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  7902401 tattattgactatcaaa 7902385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15011304 - 15011089
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  15011304 cacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 15011205  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  15011204 acaagtaatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 15011106  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  15011105 tattattgagtatcaaa 15011089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 47575276 - 47575463
Alignment:
Q  9 gcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaa 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| | |||||||||||    
T  47575276 gcatcaactttgaatttcggtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaataagtgagaaactat-ggagcaagtaa 47575374  T
Q  109 ttctcatattagatctaatac-aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacaga 196  Q
    |||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47575375 ttcatatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcggtacaga 47575463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 3997550 - 3997339
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3997550 cacaggaagcatcaactgtgaatttcggtgtgtgtaaagcaatatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 3997451  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | ||| ||||||    
T  3997450 gcaagtaattctca---tagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacggaaata 3997356  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  3997355 tattattgactatcaaa 3997339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15225771 - 15225977
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  15225771 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactctgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttggga 15225870  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15225871 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 15225960  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  15225961 tattattgagtatcaaa 15225977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10713546 - 10713749
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |   || ||||||||| ||||||||||||||| |    
T  10713546 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaa 10713645  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  10713646 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 10713744  T
Q  201 tatta 205  Q
    |||||    
T  10713745 tatta 10713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10927316 - 10927519
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |   || ||||||||| ||||||||||||||| |    
T  10927316 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaa 10927415  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  10927416 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 10927514  T
Q  201 tatta 205  Q
    |||||    
T  10927515 tatta 10927519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12488404 - 12488607
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  12488404 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 12488503  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||   ||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  12488504 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 12488602  T
Q  201 tatta 205  Q
    |||||    
T  12488603 tatta 12488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 9185172 - 9184971
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||||| |||||||||| ||   ||||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  9185172 cacaggaatcatcaactctgaatttcggggtccagaatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttggga 9185073  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9185072 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacgaaaatatattattcagtacataaata 9184983  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  9184982 tgttattcagta 9184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 9191037 - 9190835
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||||| |||||||||| ||    |||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  9191037 cacaggaatcatcaactctgaatttcggggtccataatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttggga 9190938  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  9190937 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatgtatcatattgagtacgaaaatatattattcagtacataaata 9190848  T
Q  201 tattattgagtat 213  Q
    | ||||| |||||    
T  9190847 tgttattcagtat 9190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14953543 - 14953349
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  14953543 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 14953452  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14953451 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 14953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 8660891 - 8660726
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||| ||| ||| ||||| ||||||||||||  ||||||||||    
T  8660891 cacaggaagcatcaactgtgaatctcggtgtgtatactgcactgtgtgagctctctatttacagagaaaattcactactaataagtgaagaactttggga 8660792  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatatt 167  Q
     ||| ||||| |||||||||||||| |||||||||||||| ||||||||   ||||||||| |||||    
T  8660791 acaaataattttcatattagatctagtacaaaaatatctc-aattgagtacaaaaatatattatatt 8660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 21 - 217
Target Start/End: Original strand, 39320188 - 39320383
Alignment:
Q  21 aatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat-tctcatatta 119  Q
    ||||||||| ||| ||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||  || |||| ||    
T  39320188 aatttcggtttgtcgaatgaattgtgtgagctctctatttatagtgaaagttcacaactaataagtgagaaa-tttgggaacaagtaaactcacataata 39320286  T
Q  120 gatctaatacaaaaatatctcaaattgagtctcaaaatatatcatatt-gagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
     ||||  ||||||||||||||  ||||||| ||||||||||||| ||| ||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  39320287 tatctg-tacaaaaatatctcttattgagtatcaaaatatatcaaattcgagtacaaaaatatattattcagtaaataaat-tattattgagtatcaaa 39320383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 25690600 - 25690794
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || | |||||||||||||||||            
T  25690600 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaa-------- 25690691  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25690692 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 25690789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14868556 - 14868355
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  14868556 cacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttggga 14868457  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
      ||||||||          ||||| |||||||||||  | |||||  |   |||||||||||||||||||||||||||||||||||||||||| |||||    
T  14868456 agaagtaatt---------tatctagtacaaaaatat-gccaattgtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaata 14868367  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  14868366 tgttattcagta 14868355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14899104 - 14898903
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  14899104 cacatgaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttggga 14899005  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtct--caaaatatatcatattgagtacaaaaatatattattcagtacagaaa 198  Q
     |||||||||          ||||| |||||||||||  ||| |   ||||   |||||||||||||||||||||||||||||||||||||||||| |||    
T  14899004 acaagtaatt---------tatctagtacaaaaatatgccaact---gtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaa 14898917  T
Q  199 tatattattgagta 212  Q
    ||| ||||| ||||    
T  14898916 tatgttattcagta 14898903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14877378 - 14877579
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  14877378 cacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttggga 14877477  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtct--caaaatatatcatattgagtacaaaaatatattattcagtacagaaa 198  Q
      ||||||||          ||||| |||||||||||  ||| |   ||||   ||||||||||||||||||||||||||||||||||| |||||| |||    
T  14877478 agaagtaatt---------tatctagtacaaaaatatgccaact---gtctacaaaaatatatcatattgagtacaaaaatatattatttagtacataaa 14877565  T
Q  199 tatattattgagta 212  Q
    ||| ||||| ||||    
T  14877566 tatgttattcagta 14877579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 207
Target Start/End: Original strand, 26034828 - 26034990
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaa 134  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||||||         || || ||||||||    
T  26034828 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaattc---------atttagtacaaaaa 26034918  T
Q  135 tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattatt 207  Q
    ||| || |||||  |  ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  26034919 tatgtc-aattgtctaccaaaatatatcatattgagtataaaaatatattattcagtacataaatatgttatt 26034990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 52742684 - 52742527
Alignment:
Q  29 tgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaata 128  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| || |||||||||| | |||||| ||||  |  ||||||||| | ||||||||||| ||    
T  52742684 tgtgtggaatgaactatgtgagctctctatttatagagaaaattgacaactaatacgcgagaaattttgaaaataagtaattcacgtattagatctagta 52742585  T
Q  129 caaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
     |||||||| |||||||||||  |||||||| ||||||||||||||||| ||| ||||    
T  52742584 gaaaaatatatcaaattgagtaccaaaatatgtcatattgagtacaaaagtattttat 52742527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 3309922 - 3310035
Alignment:
Q  71 ttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgag 170  Q
    ||||||||||||| |||||| || || ||| | |||||||| ||||||||||| | ||  |||||||||||| ||||| |||||||||||||||||||||    
T  3309922 ttcacaactaatatgtgagagacgttaggaactagtaattcacatattagatcgatta--aaaatatctcaatttgaggctcaaaatatatcatattgag 3310019  T
Q  171 tacaaaaatatattat 186  Q
    ||||||||||||||||    
T  3310020 tacaaaaatatattat 3310035  T

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Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 14891545 - 14891478
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14891545 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 14891478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 14898587 - 14898520
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14898587 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 14898520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 14898831 - 14898764
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14898831 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 14898764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 206
Target Start/End: Complemental strand, 1150797 - 1150640
Alignment:
Q  51 ctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtc 150  Q
    ||||||||||||||| ||| ||||||| || |  |||||| ||||||||| ||||| |||| |||||||||| |  |||||||||||||||||||||||     
T  1150797 ctctctatttatagagaaaattcacaagtactttgtgagacactttgggaacaagtgattcacatattagat-tggtacaaaaatatctcaaattgagt- 1150700  T
Q  151 tcaaaatatatcatattgagtacaaaaatatat----tattcagtacagaaatatattat 206  Q
      ||||||||| ||||||||||| | |||||||    |||| |||||| |||||||||||    
T  1150699 aaaaaatatattatattgagtaccataatatatattatattgagtacaaaaatatattat 1150640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 14868151 - 14868091
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  14868151 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 14868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 14898475 - 14898415
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  14898475 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 14898415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 14898719 - 14898659
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  14898719 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 14898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 14868284 - 14868223
Alignment:
Q  151 tcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||    
T  14868284 tcaaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagta 14868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18023227 - 18023276
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 50  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  18023227 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 18023276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 43477379 - 43477298
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    |||||||||| | |||||||||| |||||||||||||| |||||| |  |||||||||  ||||||||||| ||||||||||||    
T  43477379 aagtaattctaacattagatctagtacaaaaatatctc-aattgaataccaaaatatactatattgagtac-aaaatatattat 43477298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 26188129 - 26188047
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaatt 110  Q
    |||| |||||||||||  ||||| |||||||||||| |   | ||||||||||||| |||||||||||| ||| |||||||||    
T  26188129 gtgtctggaatgcactacgtgagttctctatttatatagttaattcacaactaatatgtgagaaactttaggaacaagtaatt 26188047  T

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Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 12383618 - 12383577
Alignment:
Q  151 tcaaaatatatcatattgagtacaaaaatatattattcagta 192  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  12383618 tcaaaatttatcatattgagtacaaaaatatattattgagta 12383577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 55073774 - 55073871
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattag 120  Q
    |||||||||||  |||| |||  ||||| |||||||||||||| ||| |||||||||||||  || |||||||| | | |||| ||||| ||||||||    
T  55073774 tttcggtgtgtataatgaactacgtgagatctctatttatagagaaaattcacaactaatatatgtgaaactttagaaacaagcaattcacatattag 55073871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5270888 - 5270856
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  5270888 cacaggaagcatcaactgtgaatttcggtgtgt 5270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 14868150 - 14868064
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  14868150 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 14868064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 14868282 - 14868196
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  14868282 aaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 14868196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 14898718 - 14898632
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  14898718 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 14898632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 32545533 - 32545579
Alignment:
Q  45 tgtgagctctctatttatagataaagttcacaactaataagtgagaa 91  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||||||    
T  32545533 tgtgagctctctatttatagagaaaattcgcaactaatatgtgagaa 32545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 32545607 - 32545665
Alignment:
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatata 160  Q
    |||||||||| | ||||| ||||| | ||||||||||||||||| ||| ||||||||||    
T  32545607 caagtaattcacgtattaaatctagttcaaaaatatctcaaatttagtatcaaaatata 32545665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 12488535 - 12488594
Alignment:
Q  154 aaatatatcatattgagtacaaaaatatattat--tcagtacagaaatatattattgagta 212  Q
    |||||||||| ||||||||||||||||||||||  | |||||| |||||||||||| ||||    
T  12488535 aaatatatca-attgagtacaaaaatatattatattaagtacaaaaatatattattcagta 12488594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 26188039 - 26187959
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 173  Q
    ||||| |||| || |||||| ||||||||||||| || |||||||||||  || ||||  ||| ||||||||||||||||||    
T  26188039 acttttggagtaaataattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 26187959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5927682 - 5927650
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||| ||||||    
T  5927682 cacaggaagcatcaactgtgaatttcagtgtgt 5927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 43477452 - 43477408
Alignment:
Q  54 tctatttatagataaagttcacaactaataagtgagaaactttgg 98  Q
    |||||||||||| ||| ||||||| |||||||||| |||||||||    
T  43477452 tctatttatagagaaaattcacaattaataagtgataaactttgg 43477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3094695 - 3094911
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3094695 cacaggaagtatcaactgtgaatttcggtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaataagtgagaaactttggga 3094794  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  3094795 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 3094894  T
Q  201 tattattgagtatcaaa 217  Q
    ||||| |||||||||||    
T  3094895 tattactgagtatcaaa 3094911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 41097446 - 41097232
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41097446 cacatgaagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 41097347  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | |||| |||||    
T  41097346 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacaaaaata 41097249  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  41097248 tattattgactatcaaa 41097232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 40232875 - 40232665
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40232875 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggag 40232776  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||     ||||  |||| |||||| || ||| ||||||    
T  40232775 caagtaattctcatattagatctagtacaaaaatatctcaaattgtgtatcaaaatatatcata-----tacatgaataaattattgaggacaaaaatat 40232681  T
Q  202 attattgagtatcaaa 217  Q
    |||||||| |||||||    
T  40232680 attattgactatcaaa 40232665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 17213929 - 17213711
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    ||||| |||||||| | ||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  17213929 aggaaacatcaactataaatttcggtgtatcgaatgtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggaaca 17213830  T
Q  104 agtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    |||||||| |||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  17213829 agtaattcacatattagttctaatacaaaaatatctcaaattgtgtatcaaaatatatcttattgagtacaaaaatatattatttagtacaaaaatatat 17213730  T
Q  204 tattgagtatcaaactatt 222  Q
     ||||||||| ||| ||||    
T  17213729 cattgagtattaaaatatt 17213711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19725392 - 19725179
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||    ||||||| ||||||| ||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  19725392 cacaggaagcatcaactgtgaatttcggtgcccagaatgcaatgtgtgaactctctatttatagagaaa--tcacaactaataaatgagaaactttggga 19725295  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||  |||| |||| || |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  19725294 gcaagtaattcaaatatcagatatagtacaaaaatatctcaa-ttgtgtaccaaaatatatcatattgagtacaaaaatatgttattcagtacataaata 19725196  T
Q  201 tattattgagtatcaaa 217  Q
     ||||||||||||||||    
T  19725195 cattattgagtatcaaa 19725179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 19726973 - 19727186
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||| |   ||||||  |||||||||||||||||||| || |||   |||||||||||| ||||||| |||| |||    
T  19726973 acaggaagcatcaactgtgaatttcggtatccagaatgct-tgtgtgagctctctatttatcgagaaatcacacaactaataaatgagaaattttgagag 19727071  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||||||| ||||| ||||||| |||||||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| |||||     
T  19727072 caagtaattcacatatcagatctagtacaaaaacatctcaa-ttgtgtttcaaaatatatcatattgagtacaaaaatatattattcagtacataaatac 19727170  T
Q  202 attattgagtatcaaa 217  Q
    ||||||||||||||||    
T  19727171 attattgagtatcaaa 19727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 39243511 - 39243308
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  39243511 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 39243412  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | | ||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  39243411 acaagtaatgcacctgttagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 39243313  T
Q  201 tatta 205  Q
    |||||    
T  39243312 tatta 39243308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 39247066 - 39246863
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  39247066 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 39246967  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | | ||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  39246966 acaagtaatgcacctgttagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 39246868  T
Q  201 tatta 205  Q
    |||||    
T  39246867 tatta 39246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 49 - 204
Target Start/End: Complemental strand, 8267292 - 8267138
Alignment:
Q  49 agctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgag 148  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaataagtgataaactttgtgagcaagtaattctcatattagatctagtacaaaaatatctaaaattgag 8267193  T
Q  149 tctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    ||||||||||||||||||||| ||||||||||| ||||| || ||| |||||||||    
T  8267192 tctcaaaatatatcatattga-tacaaaaatattttattaagaacataaatatatt 8267138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 13893922 - 13894105
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||| |||| |||||| ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13893922 cacaggaagcatcaactgtgattttcagtgtgtagaatgcattgtgtgaactctctatttatagagaaaattcacaactaataagtgagaaactttggga 13894021  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
     |||||||||| ||||||||||||| |||||||| |||||  | | |||  |||||||||| ||||||||||||||||||||||||    
T  13894022 acaagtaattcacatattagatctagtacaaaaacatctc--agttagtaccaaaatatattatattgagtacaaaaatatattat 13894105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 41387455 - 41387260
Alignment:
Q  9 gcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaa 108  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| | |||||||    
T  41387455 gcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaa 41387356  T
Q  109 ttctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    | | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  41387355 tgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 41387260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26198964 - 26199172
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||| ||| |||||| |||| | |||| |||||||||||    
T  26198964 cacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaactttggga 26199063  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||  |    
T  26199064 acaagtaattc---------atctagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacagaaatatattattcagtacataaata 26199153  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||| ||||||||||    
T  26199154 tatattatcgagtatcaaa 26199172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16836774 - 16836572
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| |||||||        | ||||||||||  |    
T  16836774 cacatgaagcatcaactgtgaatttcggtgtccagaatgcactgtgtgagctctctatttatagagaaaattcacaa--------taagaaactttgaaa 16836683  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||| || |||||||||| ||||||||||||||||||| ||||||  |||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  16836682 acaagtaactcacatattagatataatacaaaaatatctcaa-ttgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaata 16836584  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  16836583 tgttattcagta 16836572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21498257 - 21498452
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  21498257 cacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttggga 21498356  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21498357 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 21498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14804110 - 14804311
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| || | ||||||| || |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  14804110 cacaggaatcatcaactgtgaatttcggggtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttggga 14804209  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || ||||||||||| || ||||||||  |||||||| ||||||||||||||||||||||||||||||| || |||||    
T  14804210 acaagtaattc---------atttagtacaaaaatatttc-aattgagtaccaaaatatttcatattgagtacaaaaatatattattcagtccataaata 14804299  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  14804300 tgttattcagta 14804311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 22428683 - 22428483
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  22428683 cacaggaatcatcaactgtgaatttcgg-gtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttggga 22428585  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||||          ||||| |||||||||||| | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22428584 acaagtaatt---------tatctagtacaaaaatatc-ccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 22428495  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  22428494 tcttattcagta 22428483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 14819587 - 14819779
Alignment:
Q  10 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    ||||||||||||||||||| || | ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||||    
T  14819587 catcaactgtgaatttcggggtctagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 14819686  T
Q  110 tctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattga 209  Q
    ||         || || |||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||| || || |||||| ||||| |    
T  14819687 tc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtataaaaatatattattcggtccataaatatgttattca 14819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 1924542 - 1924348
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  1924542 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 1924451  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1924450 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 1924353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20923556 - 20923362
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  20923556 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 20923465  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20923464 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 20923367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 23285300 - 23285116
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaat 127  Q
    |||||| ||||||| | |||| ||| |||||||||||| ||| ||||||| ||||| ||||||| |||||||| |||||||| |  ||||||||| |||     
T  23285300 gtgtgtagaatgcaatttgtgggctatctatttatagagaaaattcacaattaatatgtgagaacctttgggaacaagtaat-caaatattagatataac 23285202  T
Q  128 acaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtat 213  Q
    | ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||| || ||||||| ||||||||||    
T  23285201 aaaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaaatattttattgagtgcaaaaatatactattgagtat 23285116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1067087 - 1067246
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||| |||    |||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||||| |||    
T  1067087 cacaggaagcatcaactgtgaatttcgttgtccataatgcaatgtgtgagttctctatttatagagaaaattcacaactaataagtgagaaactttagga 1067186  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatat 161  Q
     || ||||||| ||||||||||||| ||| |||||||||| ||||||||  ||||||||||    
T  1067187 acacgtaattcacatattagatctagtaccaaaatatctc-aattgagtaccaaaatatat 1067246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2367649 - 2367850
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||| ||  || ||| |||||| ||||||||||||||||    
T  2367649 cacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttacagctaataggtgagaaactttggga 2367748  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  2367749 acaagtaattc---------atctagtacaaaaatat-gccaattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaata 2367838  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  2367839 tgttattcagta 2367850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 2384734 - 2384533
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||| ||  || | | |||||| ||||||||||||||||    
T  2384734 cacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttagagctaataggtgagaaactttggga 2384635  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| ||||||||||| || |||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||    
T  2384634 acaagtaattc---------atctagtacaaaaatatgtc-aattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaata 2384545  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  2384544 tgttattcagta 2384533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 27308342 - 27308194
Alignment:
Q  35 gaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaa 134  Q
    ||||| ||| ||||||| ||||||||||||| ||| ||||| |||||||   ||||||||||| || ||| |||||| ||||||||||||| ||||||||    
T  27308342 gaatgaactatgtgagcactctatttatagagaaaattcactactaatataagagaaactttgagaacaaataattcacatattagatctagtacaaaaa 27308243  T
Q  135 tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
     ||||||||||||||  ||||||||||||||||  |||| ||||||||||    
T  27308242 catctcaaattgagtaccaaaatatatcatatt-cgtaccaaaatatatt 27308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 52100709 - 52100514
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||||||||  ||||||||||| ||||||| ||| ||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  52100709 cacaggaatcatcaactgtgt-tttcggtgtgttgaatgcattgtatgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 52100611  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  ||||||     |||||||||||||||||||||||||||||||| |||||    
T  52100610 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaat-----atattgagtacaaaaatatattattcagtacataaata 52100526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33055642 - 33055723
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat 82  Q
    |||| ||| |||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  33055642 cacaagaatcatcaactgtgaattttggtgtatagaatgcactgtgtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 39037049 - 39036963
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||||||||||||| ||||  |||||||||||||||||  || |||||||||||||| |||||| |||||||||||||||| |||||    
T  39037049 aaaatatctcaaatagagtaccaaaatatatcatattgtatagaaaaatatattattgagtacaaaaatatattattgagtgtcaaa 39036963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 23254648 - 23254515
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaat 127  Q
    |||||| ||||||||| |||| |||||||||||||||| ||| || | || ||||| |||||||| ||| | | ||||||| ||  |||||| ||||  |    
T  23254648 gtgtgtagaatgcactttgtgtgctctctatttatagagaaaatttataattaatatgtgagaaattttagaaacaagtaaatcaaatattaaatctggt 23254549  T
Q  128 acaaaaatatctcaaattgagtctcaaaatatat 161  Q
    |||||||||||| |||||||||| ||||||||||    
T  23254548 acaaaaatatcttaaattgagtcccaaaatatat 23254515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 21498528 - 21498588
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  21498528 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 21498588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 52100444 - 52100384
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  52100444 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 52100384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 26199218 - 26199299
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||| ||| |||||||   |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||    
T  26199218 aaaatatatcatattgagtacaaaaatatatcatattgagtacaaaaatatattatccagtacataaatatgttattcagta 26199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26319661 - 26319589
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttc 73  Q
    ||||||||||||||||||||  ||| ||||||  ||||||| |||||||||||| |||||||||| |||||||    
T  26319661 cacaggaagcatcaactgtgttttttggtgtgaagaatgcattgtgtgagctctttatttatagagaaagttc 26319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 26199217 - 26199273
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatat--tattcagtacagaaatatattat 206  Q
    ||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||    
T  26199217 caaaatatatcatattgagtacaaaaatatatcatattgagtacaaaaatatattat 26199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 26319586 - 26319505
Alignment:
Q  127 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattga 209  Q
    ||||||||||| |||| ||||||  |||||||| | |||||||  | || |||||||| ||||||||||||||||||||||||    
T  26319586 tacaaaaatatttcaa-ttgagtaccaaaatatgttatattgaagaaaataatatatttttcagtacagaaatatattattga 26319505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10135956 - 10135988
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  10135956 cacaggaagcatcaactgtgaatttcggtgtgt 10135988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18784041 - 18783993
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtga 49  Q
    |||| |||||||||||||||||||||||||||| ||||||  |||||||    
T  18784041 cacatgaagcatcaactgtgaatttcggtgtgtagaatgcgttgtgtga 18783993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26927185 - 26927153
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  26927185 cacaggaagcatcaactgtgaatttcggtgtgt 26927153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 21498529 - 21498615
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  21498529 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 21498615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 26199236 - 26199326
Alignment:
Q  127 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||||||| ||| |||||||   |||||||||  |||  |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  26199236 tacaaaaatatatcatattgagtacaaaaatatat--tatccagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 26199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 52100443 - 52100357
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  52100443 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 52100357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 10160208 - 10159991
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10160208 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaataagtgagaaactttggga 10160109  T
Q  101 gcaagtaattctcatattagatctaatac-aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    | ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10160108 gtaagtaattctcatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagtataaaaatatattattcagtacagaaat 10160009  T
Q  200 atattattgagtatcaaa 217  Q
    |||||| |||||||||||    
T  10160008 atattactgagtatcaaa 10159991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 28855740 - 28855951
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||| |||||||||||||| ||||||||||||| ||||    
T  28855740 aggaatcatcaactgtgaatttcggtgtgtcgaatgcactttgtgagctctctatttatagggaaa-ttcacaactaataaatgagaaactttggaagca 28855838  T
Q  104 agtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  28855839 agtaattctcatattagatctagtacaaaaatatctcaacttgagtatcaaaatatatcatattgagtac-aaaatatattattcagtgcataaatatat 28855937  T
Q  204 tattgagtatcaaa 217  Q
    ||||||||||||||    
T  28855938 tattgagtatcaaa 28855951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6297380 - 6297166
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||||||||||||||||||||| |||| | ||| | |||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||||||    
T  6297380 cacatgaagcatcaactgtgaatttctgtgtatagaaagaactgtgtgagctctctattt-tagagaaagttgacaactaataagtgataaactttggga 6297282  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6297281 gcaagcaattctcatattagatctagtacaaaagtatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcaatacagaaata 6297183  T
Q  201 tattattgagtatcaaa 217  Q
    |||||| ||||||||||    
T  6297182 tattatcgagtatcaaa 6297166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 6 - 203
Target Start/End: Original strand, 30658788 - 30658979
Alignment:
Q  6 gaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaag 105  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||        
T  30658788 gaagcatcaactgtgaatttgtgtatgtggaatgcactgtgtgagctctctatttatggagaaagttcacaactaataagtgagaaactttgggag---- 30658883  T
Q  106 taattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
      ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30658884 --attatcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtataaaaatatattattcagtacagaaatatat 30658979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 25375499 - 25375692
Alignment:
Q  5 ggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaa 104  Q
    |||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  25375499 ggaatcatcaactgtgaatttcagtgtgtagaatgcactgtgtaagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaa 25375598  T
Q  105 gtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    ||||||| ||||||||||||| |||||| ||||||| | ||||||  |||||| ||| ||||||||||| |||||| ||||||||||||| ||||    
T  25375599 gtaattcacatattagatctagtacaaatatatctc-agttgagtaccaaaatctattatattgagtaccaaaatacattattcagtacataaat 25375692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9785756 - 9785969
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  || |||||||||||||  | |||| ||||||||||||||||||||||||| |    
T  9785756 cacaggaagcatcaactgtgaatttcggtgtgtaaaatgcactgtg--agttctctatttatagggatagtttacaactaataagtgagaaactttggaa 9785853  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||||| ||||||   ||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  9785854 acaagtaatgcacctattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatacattattcagtacagaaata 9785952  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||| |||||||||    
T  9785953 tattattaagtatcaaa 9785969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 22845008 - 22845188
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||| ||||||||||| | |||  | |||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  22845008 cacaagaagcatcaattgtgaatttcgttctgtacattgcactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttggga 22845107  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatata 182  Q
     |||||||||| ||||||||||||| |||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  22845108 acaagtaattcacatattagatctagtacaaaaatatctc-aattgagtaccaaaatatattatattgagtacaaaaatata 22845188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 7559839 - 7559628
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat-aagtgagaaactttggg 99  Q
    |||||||||||||||||||||||||  ||||   ||||||| ||||||||||||||||||||||| ||| |||||||||||| ||  ||||||||||  |    
T  7559839 cacaggaagcatcaactgtgaatttaagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataaaaagagaaactttacg 7559740  T
Q  100 agcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    |||||||||||| ||||| ||||||| ||||||||||| || ||||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7559739 agcaagtaattcacatatcagatctagtacaaaaatatttc-aattgtgtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaat 7559641  T
Q  200 atattattgagta 212  Q
    || ||||| ||||    
T  7559640 atgttattcagta 7559628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1284120 - 1284323
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  1284120 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 1284219  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||| ||||||||||| |||||    
T  1284220 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatactattcagtacaaaaata 1284318  T
Q  201 tatta 205  Q
    |||||    
T  1284319 tatta 1284323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 17453053 - 17452859
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat-----aagtgagaaactttgggagcaagtaattctcatattaga 121  Q
    ||||||||||||| ||| |||||| |||||||||||||| ||| || |||||||||     |||||||||||||||||| |||||||||| ||| ||| |    
T  17453053 ggtgtgtggaatgtactatgtgagatctctatttatagagaaaatttacaactaatctaataagtgagaaactttgggaacaagtaattcacatgttata 17452954  T
Q  122 tctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||| |||||||||||||||| ||||||  |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  17452953 tctagtacaaaaatatctcaa-ttgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaatatattattgactatcaaa 17452859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26897233 - 26897441
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  26897233 cacaggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 26897332  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         |||||||||||||||||  | ||||   |  ||||||||||||||||||||||||||||||||||||||||||| ||  |    
T  26897333 acaagtaattc---------atctaatacaaaaatat-gccaattatctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 26897422  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  26897423 tatattattgagtatcaaa 26897441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 30344404 - 30344210
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  30344404 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 30344313  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  30344312 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 30344215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 34070029 - 34070226
Alignment:
Q  5 ggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaa 104  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||| |||    
T  34070029 ggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaa 34070128  T
Q  105 gtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatt 204  Q
    |||||||         ||||| |||||||||||  | |||||  |  ||||||||||||||||||||| |||||||||||||| |||||| |||||| ||    
T  34070129 gtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtaaaaaaatatattatttagtacataaatatgtt 34070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23068241 - 23068100
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| |||||||||||| |||||||||||| |    
T  23068241 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaactttggaa 23068142  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaa 142  Q
     |||||||| | | ||||||||||| |||  |||||||||||    
T  23068141 acaagtaatgcacctattagatctagtacttaaatatctcaa 23068100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24292950 - 24292760
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||| | ||||||||||||||||    
T  24292950 cacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaaactttggga 24292851  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24292850 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 24292761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 6856803 - 6857004
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||     ||||| | ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  6856803 cacaggaagcatcaactgtgaatttcggtccccagaatgtattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttggga 6856902  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || ||| |||||||||| ||||||||   ||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  6856903 acaagtaattc---------atttagtacgaaaatatctc-aattgagtactaaaatatatcacattaagtacaaaaatatattattcagtacataaata 6856992  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  6856993 tgttattcagta 6857004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24286382 - 24286192
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||| | ||||||| ||||||||    
T  24286382 cacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaagctttggga 24286283  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| |||||||| || || |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24286282 acaagtaattc---------atctagtacaaaaacatgtc-aattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 24286193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 42248833 - 42249042
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||  |||||||| |||||||||||||| |    
T  42248833 cacaggaagcatcaattgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttccgaactaataggtgagaaactttggaa 42248932  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattc-agtacagaa-- 197  Q
     ||||||||||         ||||| |||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||| |||||| ||      
T  42248933 acaagtaattc---------atctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcaagtacataaat 42249022  T
Q  198 atatattattgagtatcaaa 217  Q
    ||||||||||||||||||||    
T  42249023 atatattattgagtatcaaa 42249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 377778 - 377577
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||  | |||||| | ||||||||||||||||||||| ||| ||||||||||| | |||||||||||| ||     
T  377778 cacaggaagcatcaactgtgaatttcggtgtccgtaatgcattatgtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaactttaggg 377679  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||   ||| ||||| |||||||||||||||||||||||| ||||||| |||||    
T  377678 acaagtaattc---------atttagtacaaaaatatctc-aattgagtactaaagtatattatattgagtacaaaaatatattatgcagtacataaata 377589  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  377588 tgttattcagta 377577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 13291029 - 13290872
Alignment:
Q  24 ttcggtgtgtggaatgcactgtgtgagctctctattta-tagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    |||||||| ||||||| ||| |||||||||| |||| | |||| | | ||||||||||||| |||||||  ||||||| ||||||||||  ||||||  |    
T  13291029 ttcggtgtatggaatgaactatgtgagctctatattaaatagagataattcacaactaatatgtgagaatttttgggaacaagtaattcatatatta--t 13290932  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatata 182  Q
    ||||||||||||||||||||||| |||  || ||||||||||||||||| ||||||||||    
T  13290931 ctaatacaaaaatatctcaaattaagtaacataatatatcatattgagtgcaaaaatata 13290872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 30641577 - 30641455
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||||||||| |||  || | ||  ||||||||||| |||  || ||||||||| |||||||||||| ||| |||||||||| ||||||||||    
T  30641577 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaatctcaactaatatgtgagaaacttttggaacaagtaattcacatattagat 30641478  T
Q  123 ctaatacaaaaatatctcaaatt 145  Q
    ||| |||||||||||||||||||    
T  30641477 ctagtacaaaaatatctcaaatt 30641455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30635399 - 30635510
Alignment:
Q  1 cacaggaagcatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctc--tatttatagataaagttcacaactaataagtgagaaactttg 97  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||   |||||||| | ||| ||||||||||||||||||||||||| |    
T  30635399 cacaggaagcatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttataaagaaaattcacaactaataagtgagaaacttgg 30635498  T
Q  98 ggagcaagtaat 109  Q
    ||| ||||||||    
T  30635499 ggaacaagtaat 30635510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 30640460 - 30640297
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    |||||||||||||| || | | |||||||| | |||||||||| ||| ||||||| ||||   | || |||||||| | |||||||||| ||||||||||    
T  30640460 tttcggtgtgtggagtgaattttgtgagctttttatttatagagaaaattcacaagtaatgtataagtaactttggcaacaagtaattcacatattagat 30640361  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||| |||| ||||||||||||||||||  ||| |||||| ||||  || | |||||||||||||    
T  30640360 ctactacagaaatatctcaaattgagtaccaatatatataatatctagcataaaaatatattat 30640297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 26903011 - 26903071
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  26903011 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 26903071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 34070296 - 34070356
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  34070296 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 34070356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 42249085 - 42249145
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  42249085 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttatttagta 42249145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 17327708 - 17327773
Alignment:
Q  43 tgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaa 108  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||| |||||||    
T  17327708 tgtgtgagctctctatttatagagaaaatttacaactaataagtgagaaattttgggaacaagtaa 17327773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 26897484 - 26897533
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26897484 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 26897533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 6857074 - 6857134
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||    
T  6857074 caaaatatatcatatttagtacaaaaatatattattcagtacataaatatgttattcagta 6857134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 24286111 - 24286048
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtat 213  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  24286111 caaaatatatcatattgagtacaaaaatattttattcagtacataaatatatattattgagtat 24286048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 38426962 - 38426831
Alignment:
Q  47 tgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattg 146  Q
    |||| |||||||||||| | ||| ||||||||||||| || | ||| |||| ||  || |||||| ||||  |||| ||||| ||||||||||||||||     
T  38426962 tgagttctctatttata-agaaaattcacaactaataggtaaaaaaatttgtgattaaataattcacataccagatttaatataaaaatatctcaaattt 38426864  T
Q  147 agtctc-aaaatatatcatattgagtacaaaaa 178  Q
    ||| || ||||||||||||||||||||||||||    
T  38426863 agtatccaaaatatatcatattgagtacaaaaa 38426831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 19589088 - 19589006
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||| |||  |||||||||||| |||||| | |||||||||||||    
T  19589088 aagtaattcacatactagatctaatataaaaatatcttaaattaagtgccaaaatatatcaaattgag-ataaaaatatattat 19589006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18345042 - 18345074
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  18345042 cacaggaagcatcaactgtgaatttcggtgtgt 18345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17968427 - 17968397
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgt 31  Q
    |||||||||||||||||||||||||||||||    
T  17968427 cacaggaagcatcaactgtgaatttcggtgt 17968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 34070297 - 34070383
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  34070297 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 34070383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 6857106 - 6857161
Alignment:
Q  164 tattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  6857106 tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 6857161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 35192 - 34976
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  35192 cacaggaagcatcaactgtgaatttcggtgtatcgaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgacaagctttggga 35093  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  35092 gcaagtaattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattatttagtacaaaaata 34993  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  34992 tattattgagtatcaaa 34976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 727 - 513
Alignment:
Q  2 acaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggag 101  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  727 acaggaagcatcaactgtgaatttcggtgtattgaaagcactgtgtgagctctctatatgtagagaaagttcataactaataagtgagaaactttgggag 628  T
Q  102 caagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatat 201  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  627 caagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaatat 529  T
Q  202 attattgagtatcaaa 217  Q
    ||||||||||||||||    
T  528 attattgagtatcaaa 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 59032 - 59247
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||| | ||||||||||||| ||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  59032 cacaggaagcatcaattatgaatttcggtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 59131  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  59132 tcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaata 59230  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  59231 tattattgagtatcaaa 59247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 63284 - 63449
Alignment:
Q  51 ctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtc 150  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  63284 ctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtc 63383  T
Q  151 tcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  63384 tcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaatatattattgagtatcaaa 63449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9368 - 9154
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  9368 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttagga 9269  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  9268 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 9171  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  9170 tattattgactatcaaa 9154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6112247 - 6112035
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  6112247 cacaagaagcatcaactgtgaatttcggtgtgttgaatgcactgtgtgagctctctatttatatagaaagttcccaactaataagtgagaaactttggga 6112148  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||    |||    
T  6112147 gcaagtaattatcatattagatctagtacaaaaatatctcaaattgattctcaaaatagatcatattgagtacaaaaatatattattcagaac----ata 6112052  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  6112051 tattattgagtatcaaa 6112035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15704399 - 15704184
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  15704399 cacaggaagcatcaactgtgaatctcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 15704300  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  15704299 acaagtaatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaaatacaaaaatatattattcagtacagaaata 15704201  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  15704200 tattattgagtatcaaa 15704184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 16625022 - 16625223
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||||||||||    
T  16625022 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggga 16625121  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16625122 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcaatacataaata 16625211  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  16625212 tgttatttagta 16625223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 2077418 - 2077633
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||  | |||| |||||||| |||||||||||||||| |    
T  2077418 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaaaaagtgagaaactttggaa 2077517  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | |||||||| || |||  ||||||||| ||||||||   ||||||||| ||||| |||||||||||| ||||||||||||| |||||    
T  2077518 acaagtaatgcacctattagatttagtacttaaatatctc-aattgagtactaaaatatattatattaagtacaaaaatacattattcagtacataaata 2077616  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||| |||||||||    
T  2077617 tattattaagtatcaaa 2077633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22806957 - 22807160
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||| | |||| ||||||||||| ||||||||||||| |    
T  22806957 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttccctatttatagagatagtttacaactaataaatgagaaactttggaa 22807056  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  22807057 acaagtaatgcacctattagatctagtacttaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 22807155  T
Q  201 tatta 205  Q
    |||||    
T  22807156 tatta 22807160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 27324547 - 27324346
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  27324547 cacaggaagcatcaactgtgaatttcggtgtgtagaatgca--gtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 27324450  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  27324449 acaagtaatgcacctattagatctagtaattaaatatgtc-aattgagtaccaaaatatattatattaagtaaaaaaatatattattcagtacagaaata 27324351  T
Q  201 tatta 205  Q
    |||||    
T  27324350 tatta 27324346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16760988 - 16761192
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttata-gataaagttcacaactaataagtgagaaactttggg 99  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| || | | || |||||||||||||||||||||||||     
T  16760988 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttataggagataatttacaactaataagtgagaaactttgga 16761087  T
Q  100 agcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaat 199  Q
    | |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  16761088 aacaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 16761186  T
Q  200 atatta 205  Q
    ||||||    
T  16761187 atatta 16761192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26981201 - 26981409
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||    
T  26981201 cacaggaagcatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaactttggga 26981300  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||| ||||         || || |||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  26981301 acaagttattc---------atttagtacaaaaatatctc-aattgagtactaaaatatatcatattgagtacaaaaatatattattcaggacataaata 26981390  T
Q  201 --tattattgagtatcaaa 217  Q
      |||||||||||||||||    
T  26981391 tgtattattgagtatcaaa 26981409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22949838 - 22950032
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || | |||||||||||||||||            
T  22949838 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaa-------- 22949929  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  22949930 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 22950027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22953794 - 22953988
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || | |||||||||||||||||            
T  22953794 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaa-------- 22953885  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  22953886 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 22953983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23872282 - 23872476
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || | |||||||||||||||||            
T  23872282 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaa-------- 23872373  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  23872374 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 23872471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23876238 - 23876432
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || | |||||||||||||||||            
T  23876238 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaa-------- 23876329  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  23876330 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaata 23876427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19772500 - 19772376
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  19772500 cacatgaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 19772401  T
Q  101 gcaagtaattctcatattagatcta 125  Q
     |||||||| | | |||||||||||    
T  19772400 tcaagtaatgcacgtattagatcta 19772376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24588663 - 24588567
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||    
T  24588663 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaacctttggga 24588567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 31477186 - 31477011
Alignment:
Q  7 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagt 106  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| | |||||    
T  31477186 aagcatcaactgtgaattttggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 31477087  T
Q  107 aattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
    ||| | | ||||||||||| ||   |||||| || ||||||||  ||||||||||  |||| |||||||||||||||||    
T  31477086 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatat--tattcagtacaaaaatatatta 31477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 2862938 - 2862779
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||||||| || || ||| | |||||||||| |||||||||| ||||||||||    
T  2862938 tttcggtgtatggaatgaactatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaacaagtaattcacatattagat 2862839  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    ||| || ||||||||  ||||||||||   ||||||||   |||||||||||||||||||||    
T  2862838 ctagtataaaaatattgcaaattgagtacaaaaatata--ctattgagtacaaaaatatatt 2862779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 14073741 - 14073937
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||| ||| ||||||||||||||| ||  |||||||| ||| ||||||||||||||||||| ||| |||||||||||||  ||||||||||||||     
T  14073741 cacaagaatcatgaactgtgaatttcggggtccggaatgcattgtatgagctctctatttatagagaaatttcacaactaatagatgagaaactttgggg 14073840  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| ||||||         || ||||||||||||||| | ||||| ||  ||||||||| ||||||||||||||||||||||||| || |||| |||||    
T  14073841 acaaataattc---------atttaatacaaaaatatcac-aattgtgtaccaaaatataccatattgagtacaaaaatatattatgcaatacataaata 14073930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 28964233 - 28964135
Alignment:
Q  79 taataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa 177  Q
    ||||| |||||||||||||||| ||| ||||||  |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28964233 taatatgtgagaaactttgggaacaaataattcaaatattagatctagtacaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaa 28964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 14322845 - 14322695
Alignment:
Q  54 tctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctca 153  Q
    |||||||||||| | | || ||||||||||||||||||||||||| | |||||||| | | ||||||||||| ||   |||||| || ||||||||  ||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatgcacctattagatctagtaattaaatatatc-aattgagtacca 14322747  T
Q  154 aaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    |||||||| ||||| ||||||||||||||||||  |||||| ||||||||||    
T  14322746 aaatatattatattaagtacaaaaatatattatctagtacaaaaatatatta 14322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 2882241 - 2882082
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||| ||||||| ||| ||||||||||  ||||||||| ||| ||||||| || || ||| | || ||||||| |||||||||| ||||||||||    
T  2882241 tttcggtgtatggaatgaactatgtgagctctgaatttatagagaaaattcacaaatagtatgtgtgcaaatttgggaacaagtaattcacatattagat 2882142  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    ||| || ||||||||| ||||||||||   ||| ||||   |||||||||||||||||||||    
T  2882141 ctagtataaaaatatcgcaaattgagtacaaaagtata--ctattgagtacaaaaatatatt 2882082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27073591 - 27073701
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||    
T  27073591 cacaggaaacatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaactttggga 27073690  T
Q  101 gcaagtaattc 111  Q
     ||||||||||    
T  27073691 acaagtaattc 27073701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 2759552 - 2759470
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||||    
T  2759552 aagtaattcacatattagatctaataaaaaaatatctc-aattgagtaccaaaatatattatattgagtaaaaaaatatattat 2759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 16625295 - 16625360
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  16625295 caaaatatatcatatttagtataaaaatatattatttagtacataaatatattattgagtatcaaa 16625360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 27073836 - 27073903
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  27073836 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 27073903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18387538 - 18387647
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| |||||||||||| ||| || ||    |||||| ||||||||||||||||||||| | ||| ||||||| ||||| |||||||||||||||     
T  18387538 cacaggaatcatcaactgtgatttttggggtccaaaatgcattgtgtgagctctctatttatacagaaacttcacaattaataggtgagaaactttgggg 18387637  T
Q  101 gcaagtaatt 110  Q
     |||||||||    
T  18387638 acaagtaatt 18387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 26981454 - 26981521
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  26981454 caaaatatattaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaa 26981521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 15991157 - 15991075
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    ||||||||||||||||| |  | | ||||||||| |||| ||| |||||||||||||||||||||||||||| | ||||||||    
T  15991157 ggtgtgtggaatgcactatacgtgttctctatttgtagagaaaattcacaactaataagtgagaaactttggaaacaagtaat 15991075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 15640938 - 15641090
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||| ||||| | | ||||||||| ||||||||||| | | ||||||||||||| |||| ||||||||  | ||| ||||||         ||    
T  15640938 tttcggtgtgttgaatgaattatgtgagctcactatttatagagagaattcacaactaatacgtgataaactttgaaaacaattaattc---------at 15641028  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    || |||||||||||| ||| |||||||   ||||||||| |||||| |||||||||||||||    
T  15641029 ctgatacaaaaatatttcacattgagtacaaaaatatattatattgtgtacaaaaatatatt 15641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 2759739 - 2759657
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||| |  ||||||||||  ||||||||| ||| |||||||||    
T  2759739 aagtaattcacatattagatctaataaaaaaatatctc-aattgaataccaaaatatattttattgagtaaaaatatatattat 2759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 31477061 - 31477011
Alignment:
Q  154 aaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 205  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  31477061 aaatatatca-attgagtaccaaaatatattattcagtacaaaaatatatta 31477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 15645417 - 15645479
Alignment:
Q  121 atctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 183  Q
    ||||| ||||||||||||| | |||||||  |||||||||||||||||  |||||||||||||    
T  15645417 atctagtacaaaaatatcttacattgagtaccaaaatatatcatattgtttacaaaaatatat 15645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 27073742 - 27073791
Alignment:
Q  170 gtacaaaaatatattattcagtacagaaata--tattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  27073742 gtacaaaaatatattattcagtacataaatatgtattattgagtatcaaa 27073791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 19772369 - 19772328
Alignment:
Q  176 aaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  19772369 aaatatattattcagcacataaatatattattgagtatcaaa 19772328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 2759820 - 2759756
Alignment:
Q  45 tgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    |||||||||||| |||| ||| ||| |||||||||||||||| |||||||||  || ||||||||    
T  2759820 tgtgagctctctgtttacagagaaaattcacaactaataagtaagaaactttttgaacaagtaat 2759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17964023 - 17963991
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  17964023 cacaggaagcatcaactgtgaatttcggtgtgt 17963991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 15991058 - 15990977
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||||| || |||||| ||| || ||||||||||| ||||||||   ||||||||| |||||||||| |||||||||||||    
T  15991058 aagtaattcacaaattagacctagtataaaaatatctc-aattgagtaataaaatatattatattgagta-aaaaatatattat 15990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 9751154 - 9751101
Alignment:
Q  92 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaatt 145  Q
    |||||||||  ||||||||| |  |||||||| |||||||||||||||||||||    
T  9751154 actttgggatgaagtaattcactcattagatccaatacaaaaatatctcaaatt 9751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 47461 - 47247
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47461 cacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 47362  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  47361 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 47264  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  47263 tattattgactatcaaa 47247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 52405 - 52191
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52405 cacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 52306  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | ||||||||||    
T  52305 gcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaata 52208  T
Q  201 tattattgagtatcaaa 217  Q
    ||||||||| |||||||    
T  52207 tattattgactatcaaa 52191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 49472 - 49265
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||| |||||||||||||||||||| | ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49472 cacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaactttggga 49373  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||| |||||    
T  49372 gcaagtaattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatattctattgagtac-aaaatatattattcactacataaata 49274  T
Q  201 tattattga 209  Q
    |||||||||    
T  49273 tattattga 49265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 149162 - 149369
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||| |||||||||||||||||||| | ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  149162 cacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaactttggga 149261  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||| |||||    
T  149262 gcaagtaattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatattctattgagtac-aaaatatattattcactacataaata 149360  T
Q  201 tattattga 209  Q
    |||||||||    
T  149361 tattattga 149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 127009 - 127224
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  127009 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 127108  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
      ||||||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  127109 aaaagtaatgcacctattagatctagtacttaaatatctc-aattgagtgccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 127207  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  127208 tattattgagtatcaaa 127224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21913 - 22128
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| | |||| |||||| |||||||||||||||||| |    
T  21913 cacaggaagcatcaactgtgaatttcagtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaacttataagtgagaaactttggaa 22012  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  22013 acaagtaatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 22111  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  22112 tattattgagtatcaaa 22128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 6994 - 7209
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||| ||||||||||| |    
T  6994 cacatgaagcatcaactatgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagttagaaactttggaa 7093  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| |||  ||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| ||| |    
T  7094 acaagtaatgcacctattagatctagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaaga 7192  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  7193 tattattgagtatcaaa 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5369 - 5154
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||  | |||| ||||||||||||||||||||||||  |    
T  5369 cacaggaagcatcaactgtgaatttcggtgtgtaggatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaactttgaaa 5270  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | ||||||||||||| |||  ||||||||| ||||||||   ||| ||||| ||||| |||||||||||||||||||||||||| |||||    
T  5269 acaagtaatgcacatattagatctagtacttaaatatctc-aattgagtactaaattatattatattaagtacaaaaatatattattcagtacaaaaata 5171  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  5170 tattattgagtatcaaa 5154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 2193 - 2046
Alignment:
Q  69 agttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattg 168  Q
    |||| ||||||||||||||||||||||||| | |||||||| | ||||||||||||| |||  ||||||||||| ||||||   ||||||||| |||||     
T  2193 agtttacaactaataagtgagaaactttggaaacaagtaatgcacatattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatatta 2095  T
Q  169 agtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2094 agtacaaaaatatattattcagtacaaaaatatattattgagtatcaaa 2046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14965 - 14762
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  14965 cacaagaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 14866  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  14865 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaata 14767  T
Q  201 tatta 205  Q
    |||||    
T  14766 tatta 14762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 30293 - 30491
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||    
T  30293 aggaagcatcaactgtgaatttcggggtgtcgaatgcagtgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaaca 30392  T
Q  104 agtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatat 203  Q
    ||||||||         || ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  30393 agtaattc---------atttaatacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgt 30482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 24247 - 24312
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24247 caaaatatatcatattgagtacaaaaataaattattcagtacagaaatatattattgagtatcaaa 24312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7483 - 7686
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  7483 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 7582  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  7583 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 7681  T
Q  201 tatta 205  Q
    |||||    
T  7682 tatta 7686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7773 - 7988
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||| || |||||||||| |||||| |||||||||||||||| |||||||||||||| | |||| |||||||||||| |||||||||||| |    
T  7773 cacaggaagcataaattgtgaatttctgtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaactttggaa 7872  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||| |||| | | |||||||| || |||  ||||||||| ||||||||  |||||||||| ||||| |||||||||||||||| ||||||||| |||||    
T  7873 acaaataatgcacctattagatttagtacttaaatatctc-aattgagtaccaaaatatattatattaagtacaaaaatatattcttcagtacaaaaata 7971  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||||||||||||    
T  7972 tattattgagtatcaaa 7988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10914 - 10711
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  10914 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 10815  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  || ||||||||||||| |||||||||||||||||||||||||| |||||    
T  10814 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccataatatatcatattaagtacaaaaatatattattcagtacaaaaata 10716  T
Q  201 tatta 205  Q
    |||||    
T  10715 tatta 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 24784 - 24583
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  24784 cacaggaatcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaactttggga 24685  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24684 acaagtaattc---------atttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 24595  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  24594 tgttattcagta 24583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32073 - 31870
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  32073 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 31974  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||   ||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  31973 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 31875  T
Q  201 tatta 205  Q
    |||||    
T  31874 tatta 31870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 31942 - 31883
Alignment:
Q  154 aaatatatcatattgagtacaaaaatatattat--tcagtacagaaatatattattgagta 212  Q
    |||||||||| ||||||||||||||||||||||  | |||||| |||||||||||| ||||    
T  31942 aaatatatca-attgagtacaaaaatatattatattaagtacaaaaatatattattcagta 31883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 13500 - 13297
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  13500 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 13401  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||   ||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  13400 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtactaaaatatattatattaagtacaaaaatatattattcagtacaaaaata 13302  T
Q  201 tatta 205  Q
    |||||    
T  13301 tatta 13297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 104; Significance: 6e-52; HSPs: 4)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 19710 - 19509
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||    
T  19710 cacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttagga 19611  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||    
T  19610 acaagtaattc---------atttagtacaaaaatatctc-aattgagtactaaaatatatcatattgagtacaaaaatatattattcagtacataaata 19521  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  19520 tgttattcagta 19509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 8946 - 8886
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  8946 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 19437 - 19401
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattc 188  Q
    |||||||||||||||||||||||||||||||||||||    
T  19437 caaaatatatcatattgagtacaaaaatatattattc 19401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 8945 - 8859
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  8945 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21474 - 21272
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  21474 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 21375  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| ||||| |||||||||||||||||||| |||||    
T  21374 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtac-aaaatatattattcagtacaaaaata 21277  T
Q  201 tatta 205  Q
    |||||    
T  21276 tatta 21272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 35499 - 35297
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |  ||| ||||||||||||||||||||||||| |    
T  35499 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagattgtttacaactaataagtgagaaactttggaa 35400  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||| | | ||||||||||| ||   |||||| || |||| |||  |||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  35399 acaagtaatgcacctattagatctagtaattaaatatatc-aattaagtaccaaaatatattatattaagtac-aaaatatattattcagtacagaaata 35302  T
Q  201 tatta 205  Q
    |||||    
T  35301 tatta 35297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 100; Significance: 1e-49; HSPs: 14)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 193755 - 193554
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  193755 cacaggaagcatcaactgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttggga 193656  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         ||||| ||||||||||| || |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  193655 acaagtaattc---------atctagtacaaaaatatgtc-aattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 193566  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  193565 tgttattcagta 193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 188069 - 187862
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||| ||||||| ||   ||||||| ||||||| | || |||||||||| ||| ||||||||| ||| |||||||||||||| |    
T  188069 cacaggaagcatcaactgtgtatttcggggtcctgaatgcattgtgtgaaccctatatttatagagaaacttcacaactgataggtgagaaactttggaa 187970  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--a 198  Q
     ||||||||||         ||||| |||||||||||  ||| |||  |  |||||||||||||||||||||||||| |||||||||||||||| ||  |    
T  187969 -caagtaattc---------atctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaactatattattcagtacataaata 187881  T
Q  199 tatattattgagtatcaaa 217  Q
    |||||||||||||||||||    
T  187880 tatattattgagtatcaaa 187862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 192964 - 192904
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  192964 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 193094 - 193034
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  193094 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 193034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 193224 - 193164
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  193224 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 193164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 193354 - 193294
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  193354 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 193294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 193484 - 193424
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  193484 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 193424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 187819 - 187759
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||    
T  187819 caaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagta 187759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 187818 - 187732
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  187818 aaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 187732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 192963 - 192877
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  192963 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 192877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 193093 - 193007
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  193093 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 193223 - 193137
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  193223 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 193137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 193483 - 193397
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  193483 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 193397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 193353 - 193268
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaa 216  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  |||||||||||||||||||    
T  193353 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaa 193268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 472 - 678
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||| |   ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||     
T  472 cacaggaagcatcaactgtgaatttcggtatccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttgggg 571  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||| | ||||||||   ||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  572 acaagtaattc---------atgtagtacaaaaatatc-ccaattgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaata 661  T
Q  201 tattattgagtatcaaa 217  Q
    |||||||| ||||||||    
T  662 tattattgtgtatcaaa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 10464 - 10281
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| |    
T  10464 cacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaa 10365  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 185  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  10364 acaagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 10281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 3835 - 3634
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||    
T  3835 cacaggaagcatcaactgtgaatttcggggttcagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttagga 3736  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || ||||||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3735 acaagtaattc---------atttaatacaaaaatat-gccaattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 3646  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  3645 tgttattcagta 3634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 87; Significance: 8e-42; HSPs: 7)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 81164 - 81356
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  81164 cacaggaatcatcaactgtgaatttcggggtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttggga 81263  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||         || ||||| |||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  81264 acaagtaa---------tacatctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 81353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 64766 - 64967
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||| ||| ||||||||||||||||||| |||| | | ||| ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  64766 cacatgaatcatcaactgtgaatttcggggtgttgtacgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttggga 64865  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     |||||||         || ||||| |||||||||||  | |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  64866 acaagtaa---------tacatctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaata 64955  T
Q  201 tattattgagta 212  Q
    | ||||| ||||    
T  64956 tgttattcagta 64967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 65037 - 65097
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  65037 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 65097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 65167 - 65227
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  65167 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 65227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 81416 - 81475
Alignment:
Q  153 aaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  81416 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 81475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 65168 - 65254
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  65168 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 65254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 81416 - 81502
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  81416 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 81502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 121175 - 121313
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||||||||||||||||| | ||    
T  121175 aggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaaca 121274  T
Q  104 agtaattctcatattagatctaatacaaaaatatctcaa 142  Q
    |||||| | | ||||||||||| |||  |||||||||||    
T  121275 agtaatgcacctattagatctagtacttaaatatctcaa 121313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1094 - 1289
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || |||||||||||||||||||            
T  1094 cacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa-------- 1185  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa-atatattattcagtacagaaat 199  Q
     |||||||| | | ||||||||||| ||   |||||| || ||||||||  |||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  1186 -caagtaatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaatatatattattcagtacaaaaat 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12456 - 12332
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| |    
T  12456 cacagaaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaa 12357  T
Q  101 gcaagtaattctcatattagatcta 125  Q
     |||||||| | | |||||||||||    
T  12356 acaagtaatgcacctattagatcta 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 71738 - 71846
Alignment:
Q  2 acaggaagcatcaactgtgaa-tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  71738 acaggaagcatcaactgtgaaattttggtgtgtagaatgcactgtgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttggga 71837  T
Q  101 gcaagtaat 109  Q
     ||||||||    
T  71838 acaagtaat 71846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 71863 - 71943
Alignment:
Q  103 aagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 184  Q
    ||||||||  |||||||| |||| |||||||||||||| ||||||||  |||||||||| || ||  |||| ||||||||||    
T  71863 aagtaatttacatattagctctagtacaaaaatatctc-aattgagtaccaaaatatattattttatgtaccaaaatatatt 71943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 30876 - 30983
Alignment:
Q  4 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagca 103  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||    
T  30876 aggaagcatcaactgtgaatttcggtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaactttggaaaca 30975  T
Q  104 agtaattc 111  Q
    ||||||||    
T  30976 agtaattc 30983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 26819 - 26884
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26819 caaaatatatcatattgagtacaaaaatatattattcagtacaaaaatatattattgagtatcaaa 26884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 217
Target Start/End: Complemental strand, 6954 - 6790
Alignment:
Q  52 tctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtct 151  Q
    |||||||||||||  | |||| ||||||||||||||||||||||||| |  ||||||| | | ||||||||||| |||  ||||||||||| ||||||      
T  6954 tctctatttatagggatagtttacaactaataagtgagaaactttggaaataagtaatgcacctattagatctagtacttaaatatctcaa-ttgagtac 6856  T
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
     ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6855 taaaatatattatattaagtacaaaaatacattattcagtacagaaatatattattaagtatcaaa 6790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 178
Target Start/End: Original strand, 8215 - 8369
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||||||||| |||  |||| ||  ||||||||||| |||  ||| |||||||| |||||||||||||||| |||||||||| ||||||||||    
T  8215 tttcggtgtgtggaatgaactaggtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaattcacatattagat 8314  T
Q  123 ctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaa 178  Q
    ||| ||||||||||||||||||| |||  | ||||| |||||||||||||||||||    
T  8315 ctagtacaaaaatatctcaaattcagt-accaaataaatcatattgagtacaaaaa 8369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 211
Target Start/End: Original strand, 2891 - 3022
Alignment:
Q  77 actaataagtgagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaa- 175  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||| | |  | ||||| ||||||||||||||||     
T  2891 actaatatgtgagaaactttgggaacaagtaattcacatattagatctagtacaaaaatatgtcaaattcaat-accaaatagatcatattgagtacaag 2989  T
Q  176 aaatatattattcagtacagaaatatattattgagt 211  Q
    ||||||||| || |||||  ||||||||||||||||    
T  2990 aaatatatt-ttgagtac--aaatatattattgagt 3022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 199798 - 199997
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttggga 100  Q
    |||||||| ||||||||||||||||||||     ||||||| ||||||||||||||||||||||| ||| ||| ||||||||| ||||||||| |||||     
T  199798 cacaggaatcatcaactgtgaatttcggtcca--gaatgcattgtgtgagctctctatttatagagaaacttcgcaactaataggtgagaaacattgggg 199895  T
Q  101 gcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaata 200  Q
     ||||||||||         || || |||||||||||| | ||||||||   ||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  199896 acaagtaattc---------atgtagtacaaaaatatc-ctaattgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaata 199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 83670 - 83744
Alignment:
Q  143 attgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  83670 attgagtatcaaaatatattatattgagtacaaaaatatattattcagtacataaatatattattgagtatcaaa 83744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 6017 - 5895
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||||||||||||||| |||  || | ||  ||||||||||| |||   ||||||||||| |||||||||||| ||| |||||||||| ||||||||||    
T  6017 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaagcacaactaatatgtgagaaactttcggaacaagtaattcacatattagat 5918  T
Q  123 ctaatacaaaaatatctcaaatt 145  Q
    ||| |||||||||||||||||||    
T  5917 ctagtacaaaaatatctcaaatt 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 256444 - 256526
Alignment:
Q  27 ggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaat 109  Q
    |||||||| |||||||| |||||  |||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||    
T  256444 ggtgtgtgaaatgcactatgtgatttctctatttatagagaatattcacaactaataagtgagaaactttgggaacaagtaat 256526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 256545 - 256625
Alignment:
Q  105 gtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 186  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||   ||||||||| ||||||||||||||||| ||||||    
T  256545 gtaattcacatattagatctaatacaaaaatatttc-aattgagtgcgaaaatatattatattgagtacaaaaatgtattat 256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 1 - 61
Alignment:
Q  152 caaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  1 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagta 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 2 - 88
Alignment:
Q  131 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacagaa--atatattattgagtatcaaa 217  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||||    
T  2 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaa 88  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 22649 - 22713
Alignment:
Q  153 aaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagtatcaaa 217  Q
    ||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  22649 aaaatatattatattaagtacaaaaataaattattcagtacaaaaatatattattaagtatcaaa 22713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22583 - 22644
Alignment:
Q  28 gtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgag 89  Q
    |||||| |||||||||||| ||| |||||||||||||  | |||| ||||||||||||||||    
T  22583 gtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataagtgag 22644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11800 - 11832
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  11800 cacaggaagcatcaactgtgaatttcggtgtgt 11832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 22325 - 22372
Alignment:
Q  11 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctat 58  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22325 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctat 22372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 1105 - 1020
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaa 108  Q
    ||||||||||||||||| |||  |||| ||  ||||||||||| |||  ||| |||||||| |||||||||||||||| |||||||    
T  1105 tttcggtgtgtggaatgaactacgtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaa 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 3924 - 3811
Alignment:
Q  23 tttcggtgtgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaattctcatattagat 122  Q
    ||||| ||| ||||||| | | |||||||||||    ||||||| || ||||| ||||||  |||||||||||||| | ||||||| || ||||||||||    
T  3924 tttcgatgtttggaatgaattatgtgagctctc----tatagatgaaattcactactaatttgtgagaaactttggaaacaagtaaatcacatattagat 3829  T
Q  123 ctaatacaaaaatatctc 140  Q
    ||| ||| ||||||||||    
T  3828 ctagtactaaaatatctc 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22281 - 22337
Alignment:
Q  1 cacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctcta 57  Q
    |||||||||||||||||||||||||||| ||   ||||||| |||||||||||||||    
T  22281 cacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctcta 22337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 22400 - 22428
Alignment:
Q  153 aaaatatatcatattgagtacaaaaatat 181  Q
    |||||||||||||||||||||||||||||    
T  22400 aaaatatatcatattgagtacaaaaatat 22428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 8372 - 8434
Alignment:
Q  87 gagaaactttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagt 149  Q
    |||||||||||| | ||||||||||  ||||||||| || ||||||||||| |||||||||||    
T  8372 gagaaactttggaaacaagtaattcatatattagatatagtacaaaaatatatcaaattgagt 8434  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 23166 - 23069
Alignment:
Q  104 agtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat--tattcagtacagaaatat 201  Q
    |||||||| ||||||| ||||| |  |||||||||||||||||||   ||||||     |||||||||||||||||||||  ||||||||||  ||||||    
T  23166 agtaattcacatattaaatctactttaaaaatatctcaaattgagcaccaaaat-----atattgagtacaaaaatatatcatattcagtaccaaaatat 23072  T

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