View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11625_high_41 (Length: 270)
Name: NF11625_high_41
Description: NF11625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11625_high_41 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 44247230 - 44246980
Alignment:
| Q |
1 |
attcagagttcggtcgtgagataaatatagtatgttcaataactgttttacctaaaagtcaaattcgagatctcttaaacaatctatcctttaatgaaat |
100 |
Q |
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| T |
44247230 |
attcagagttcggtcgtgagataaatatagtctgttcaataactgttttatctaaaagttaaatttgagatctcttgaacaatccatcctttaatgaaat |
44247131 |
T |
|
| Q |
101 |
tcattaaccatttgaggtcaatcacttcattgagcaaagaactattttaagctcaaagaaaaattactagaaccaattttgtctctnnnnnnngtaaaac |
200 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |
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| T |
44247130 |
tcattaaccacttgaggtcaatcacttcattgagcaaagaactattttaagctcaaagaaaaattgctagaaccaattatgtctctaaaataagtaaaac |
44247031 |
T |
|
| Q |
201 |
aatattttagtccttgaagaaagtaattcgaaacaaattagtccctacctt |
251 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
44247030 |
aatattttagtccttgaagaaagtaattctaaacaaattagtccctacctt |
44246980 |
T |
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